Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0014168

Physical Location & Seq

Genomic Coordinates Forward (+)

18408543 .. 18410248

Gene Structure 1706 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G246100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 771 bp

ATGCCACCTCGGAGATATGCCTTTGGGAGGGCCGACGAGGCCACCCACCCTGACTCCATGAGAGCCACTTTAGCTGAATTCGTTGCCACTTTCATCTTTGTCTTTGCTGGGGAAGGCTCTGTTCTCGCTCTTGGGAAGATTTACAAGGATAGCGGCACATCAGCAGCTGAGCTGATAGCCATAGCTCTTGCACATGCCTTCTCTCTATTTTCGGCCGTCTCAACCAGCATTAACGTATCTGGTGGCCACGTCAACCCTGCTGTAACCTTCGGTGCACTTATTGGTGGAAGGCTCTCTGTTGTTCGCGCCCTTTACTACTGGGTTGCTCAGCTCCTTGGGGCTATTGTGGCTTCCCTTTTGCTAAGGCTTGTCACAAATGGCATGAGGACAGTGGCGTTCAGCATGGCCTCTGGTGTTGGCGAGTGGCATGGGCTAATACTAGAGATTGTGATGACATTTGGGTTAGTTTACACCGTGTATGCTACTGCCATTGATCCCAAGAGGGGTAGCTTGGGAACTATGGCACCACTGGCAATTGGATTGATTGTTGGGGCAAATATCCTGGTGGGCGGGCCTTTTGACGGGGCATCCATGAACCCAGCAAGGGCATTCGGGCCTGCACTGGTAGGGTGGAGATGGAGGAACCACTGGATCTACTGGGTTGGACCATTTATAGGAGGTGGGTTGGCAGCTCTCATATATGAGTACATGGTGATACCAACAGAGACCCCCCACCACACTCACCAGCCCTTGGCTCCTGAGGATTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000322 GO:0000325 GO:0000326 GO:0003006 GO:0003674 GO:0005215 GO:0005372 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006833 GO:0006914 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009705 GO:0009791 GO:0009987 GO:0010154 GO:0010431 GO:0015250 GO:0015267 GO:0015318 GO:0016020 GO:0016021 GO:0021700 GO:0022414 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0032586 GO:0034220 GO:0042044 GO:0042807 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0061919 GO:0071695 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MIP

Protein Analysis

257

Amino Acids

27.25

Weight (kDa)

7.11

Isoelectric Point (pI)

29.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014168)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17810 AT1G73190
fragaria_vesca	FvH4_5g18640
malus_domestica	MD06G1241500.v1.1
prunus_persica	Prupe.5G246100_v2.0.a1
pyrus_communis	pycom06g21660
rosa_chinensis	RchiOBHm_Chr7g0176871
rosa_laevigata	RLG00000005577
rosa_multiflora	Rmu_co8433363.1_g000001 Rmu_sc0002436.1_g000002 Rmu_sc0005310.1_g000053
rosa_rugosa	Rorug06G0401300
rosa_samantha	Rh7AG000700 Rh7BG001300 Rh7CG000700 Rh7DG001000
rosa_wichuraiana	Rw7G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	523
AccB7I	CCANNNNNTGG	1 cut(s)	751
AccII	CGCG	1 cut(s)	306
AciI	CCGC	2 cut(s)	153, 570
AclWI	GGATC	2 cut(s)	488, 659
AcoI	YGGCCR	2 cut(s)	213, 244
AcsI	RAATTY	1 cut(s)	77
AfaI	GTAC	1 cut(s)	707
AfiI	CCNNNNNNNGG	6 cut(s)	27, 503, 581, 604, 674, 751
AjiI	CACGTC	1 cut(s)	250
AjnI	CCWGG	1 cut(s)	561
AluBI	AGCT	7 cut(s)	74, 167, 172, 185, 331, 510, 692
AluI	AGCT	7 cut(s)	74, 167, 172, 185, 331, 510, 692
Alw21I	GWGCWC	1 cut(s)	277
Alw26I	GTCTC	2 cut(s)	223, 719
Alw44I	GTGCAC	1 cut(s)	273
AlwI	GGATC	2 cut(s)	488, 659
AlwNI	CAGNNNCTG	1 cut(s)	167
AoxI	GGCC	7 cut(s)	30, 39, 213, 244, 405, 572, 614
ApaLI	GTGCAC	1 cut(s)	273
ApeKI	GCWGC	2 cut(s)	164, 689
ApoI	RAATTY	1 cut(s)	77
AspLEI	GCGC	1 cut(s)	308
AspS9I	GGNCC	4 cut(s)	30, 572, 614, 665
AsuHPI	GGTGA	2 cut(s)	724, 734
AvaII	GGWCC	1 cut(s)	665
AxyI	CCTNAGG	1 cut(s)	759
BaeGI	GKGCMC	1 cut(s)	277
BalI	TGGCCA	1 cut(s)	246
BanI	GGYRCC	1 cut(s)	523
Bbv12I	GWGCWC	1 cut(s)	277
BbvI	GCAGC	2 cut(s)	176, 701
BccI	CCATC	1 cut(s)	630
BceAI	ACGGC	1 cut(s)	200
BciT130I	CCWGG	1 cut(s)	563
BcoDI	GTCTC	2 cut(s)	223, 719
BfaI	CTAG	2 cut(s)	440, 769
BglI	GCCNNNNNGGC	1 cut(s)	38
BisI	GCNGC	3 cut(s)	154, 165, 690
BlpI	GCTNAGC	2 cut(s)	168, 327
BlsI	GCNGC	3 cut(s)	155, 166, 691
Bme1390I	CCNGG	1 cut(s)	563
Bme18I	GGWCC	1 cut(s)	665
BmgBI	CACGTC	1 cut(s)	250
BmgT120I	GGNCC	4 cut(s)	30, 572, 614, 665
BmiI	GGNNCC	3 cut(s)	525, 644, 756
BmrFI	CCNGG	1 cut(s)	563
BmrI	ACTGGG	2 cut(s)	328, 667
BmsI	GCATC	1 cut(s)	596
BmuI	ACTGGG	2 cut(s)	328, 667
Bpu10I	CCTNAGC	1 cut(s)	362
Bpu1102I	GCTNAGC	2 cut(s)	168, 327
BsaI	GGTCTC	1 cut(s)	719
BsaJI	CCNNGG	3 cut(s)	8, 334, 750
BsaXI	ACNNNNNCTCC	2 cut(s)	38, 68
Bsc4I	CCNNNNNNNGG	6 cut(s)	27, 503, 581, 604, 674, 751
Bse1I	ACTGG	5 cut(s)	323, 534, 627, 653, 662
Bse21I	CCTNAGG	1 cut(s)	759
BseBI	CCWGG	1 cut(s)	563
BseDI	CCNNGG	3 cut(s)	8, 334, 750
BseGI	GGATG	1 cut(s)	587
BseLI	CCNNNNNNNGG	6 cut(s)	27, 503, 581, 604, 674, 751
BseMII	CTCAG	3 cut(s)	159, 341, 750
BseNI	ACTGG	5 cut(s)	323, 534, 627, 653, 662
BseSI	GKGCMC	1 cut(s)	277
BseX3I	CGGCCG	1 cut(s)	213
BseXI	GCAGC	2 cut(s)	176, 701
BseYI	CCCAGC	2 cut(s)	107, 598
BsgI	GTGCAG	1 cut(s)	603
Bsh1236I	CGCG	1 cut(s)	306
Bsh1285I	CGRYCG	1 cut(s)	216
BshFI	GGCC	7 cut(s)	32, 41, 215, 246, 407, 574, 616
BshNI	GGYRCC	1 cut(s)	523
BsiEI	CGRYCG	1 cut(s)	216
BsiHKAI	GWGCWC	1 cut(s)	277
BslI	CCNNNNNNNGG	6 cut(s)	27, 503, 581, 604, 674, 751
BsmAI	GTCTC	2 cut(s)	223, 719
BsmBI	CGTCTC	1 cut(s)	223
BsmI	GAATGC	1 cut(s)	608
BsnI	GGCC	7 cut(s)	32, 41, 215, 246, 407, 574, 616
Bso31I	GGTCTC	1 cut(s)	719
Bsp1286I	GDGCHC	1 cut(s)	277
Bsp143I	GATC	2 cut(s)	493, 651
Bsp1720I	GCTNAGC	2 cut(s)	168, 327
BspACI	CCGC	2 cut(s)	153, 570
BspANI	GGCC	7 cut(s)	32, 41, 215, 246, 407, 574, 616
BspCNI	CTCAG	3 cut(s)	160, 340, 751
BspFNI	CGCG	1 cut(s)	306
BspLI	GGNNCC	3 cut(s)	525, 644, 756
BspPI	GGATC	2 cut(s)	488, 659
BspT107I	GGYRCC	1 cut(s)	523
BspTNI	GGTCTC	1 cut(s)	719
BsrI	ACTGG	5 cut(s)	323, 534, 627, 653, 662
BssECI	CCNNGG	3 cut(s)	8, 334, 750
BssMI	GATC	2 cut(s)	493, 651
BssT1I	CCWWGG	2 cut(s)	334, 750
Bst2UI	CCWGG	1 cut(s)	563
Bst4CI	ACNGT	2 cut(s)	391, 475
BstC8I	GCNNGC	2 cut(s)	572, 618
BstDEI	CTNAG	4 cut(s)	168, 327, 362, 759
BstENI	CCTNNNNNAGG	1 cut(s)	25
BstF5I	GGATG	1 cut(s)	587
BstFNI	CGCG	1 cut(s)	306
BstHHI	GCGC	1 cut(s)	308
BstKTI	GATC	2 cut(s)	496, 654
BstMAI	GTCTC	2 cut(s)	223, 719
BstMBI	GATC	2 cut(s)	493, 651
BstMCI	CGRYCG	1 cut(s)	216
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 71, 347, 530
BstNI	CCWGG	1 cut(s)	563
BstNSI	RCATGY	1 cut(s)	197
BstSCI	CCNGG	1 cut(s)	561
BstSLI	GKGCMC	1 cut(s)	277
BstUI	CGCG	1 cut(s)	306
BstV1I	GCAGC	2 cut(s)	176, 701
BstX2I	RGATCY	1 cut(s)	651
BstYI	RGATCY	1 cut(s)	651
BstZI	CGGCCG	1 cut(s)	213
Bsu36I	CCTNAGG	1 cut(s)	759
BsuRI	GGCC	7 cut(s)	32, 41, 215, 246, 407, 574, 616
BtrI	CACGTC	1 cut(s)	250
BtsCI	GGATG	1 cut(s)	587
BtsIMutI	CAGTG	4 cut(s)	396, 527, 620, 646
Cac8I	GCNNGC	2 cut(s)	572, 618
CaiI	CAGNNNCTG	1 cut(s)	167
CfoI	GCGC	1 cut(s)	308
Cfr13I	GGNCC	4 cut(s)	30, 572, 614, 665
Csp6I	GTAC	1 cut(s)	706
CviAII	CATG	7 cut(s)	58, 194, 382, 403, 428, 592, 709
CviQI	GTAC	1 cut(s)	706
DdeI	CTNAG	4 cut(s)	168, 327, 362, 759
DpnI	GATC	2 cut(s)	495, 653
DpnII	GATC	2 cut(s)	493, 651
EaeI	YGGCCR	2 cut(s)	213, 244
EagI	CGGCCG	1 cut(s)	213
EclXI	CGGCCG	1 cut(s)	213
Eco130I	CCWWGG	2 cut(s)	334, 750
Eco31I	GGTCTC	1 cut(s)	719
Eco47I	GGWCC	1 cut(s)	665
Eco52I	CGGCCG	1 cut(s)	213
Eco81I	CCTNAGG	1 cut(s)	759
EcoNI	CCTNNNNNAGG	1 cut(s)	25
EcoRI	GAATTC	1 cut(s)	77
EcoRII	CCWGG	1 cut(s)	561
EcoT14I	CCWWGG	2 cut(s)	334, 750
ErhI	CCWWGG	2 cut(s)	334, 750
Esp3I	CGTCTC	1 cut(s)	223
FaeI	CATG	7 cut(s)	61, 197, 385, 406, 431, 595, 712
FatI	CATG	7 cut(s)	57, 193, 381, 402, 427, 591, 708
FauI	CCCGC	1 cut(s)	563
Fnu4HI	GCNGC	3 cut(s)	154, 165, 690
FokI	GGATG	1 cut(s)	574
Fsp4HI	GCNGC	3 cut(s)	154, 165, 690
FspBI	CTAG	2 cut(s)	440, 769
GlaI	GCGC	1 cut(s)	307
GluI	GCNGC	3 cut(s)	154, 165, 690
GsaI	CCCAGC	2 cut(s)	111, 602
HaeIII	GGCC	7 cut(s)	32, 41, 215, 246, 407, 574, 616
HhaI	GCGC	1 cut(s)	308
Hin1II	CATG	7 cut(s)	61, 197, 385, 406, 431, 595, 712
Hin6I	GCGC	1 cut(s)	306
HinP1I	GCGC	1 cut(s)	306
HincII	GTYRAC	1 cut(s)	253
HindII	GTYRAC	1 cut(s)	253
HinfI	GANTC	1 cut(s)	53
HphI	GGTGA	2 cut(s)	724, 734
Hpy166II	GTNNAC	3 cut(s)	253, 275, 469
Hpy188I	TCNGA	1 cut(s)	12
Hpy188III	TCNNGA	1 cut(s)	758
Hpy8I	GTNNAC	3 cut(s)	253, 275, 469
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	4 cut(s)	107, 208, 277, 282
HpyCH4III	ACNGT	2 cut(s)	391, 475
HpyCH4IV	ACGT	2 cut(s)	234, 249
HpyCH4V	TGCA	3 cut(s)	191, 275, 620
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 71, 347, 530
HpyF3I	CTNAG	4 cut(s)	168, 327, 362, 759
HpySE526I	ACGT	2 cut(s)	234, 249
Hsp92II	CATG	7 cut(s)	61, 197, 385, 406, 431, 595, 712
HspAI	GCGC	1 cut(s)	306
Kzo9I	GATC	2 cut(s)	493, 651
LmnI	GCTCC	2 cut(s)	336, 760
Lsp1109I	GCAGC	2 cut(s)	176, 701
LweI	GCATC	1 cut(s)	596
MaeI	CTAG	2 cut(s)	440, 769
MaeII	ACGT	2 cut(s)	234, 249
MaeIII	GTNAC	2 cut(s)	262, 370
MalI	GATC	2 cut(s)	495, 653
MboI	GATC	2 cut(s)	493, 651
MboII	GAAGA	1 cut(s)	148
MfeI	CAATTG	1 cut(s)	534
MflI	RGATCY	1 cut(s)	651
MhlI	GDGCHC	1 cut(s)	277
MlsI	TGGCCA	1 cut(s)	246
MluCI	AATT	2 cut(s)	77, 534
MluNI	TGGCCA	1 cut(s)	246
MlyI	GAGTC	1 cut(s)	47
MmeI	TCCRAC	1 cut(s)	643
MnlI	CCTC	9 cut(s)	18, 21, 31, 378, 418, 495, 633, 671, 754
Mox20I	TGGCCA	1 cut(s)	246
MscI	TGGCCA	1 cut(s)	246
MseI	TTAA	1 cut(s)	231
Msp20I	TGGCCA	1 cut(s)	246
MspA1I	CMGCKG	1 cut(s)	167
MspR9I	CCNGG	1 cut(s)	563
MunI	CAATTG	1 cut(s)	534
Mva1269I	GAATGC	1 cut(s)	608
MvaI	CCWGG	1 cut(s)	563
MvnI	CGCG	1 cut(s)	306
MwoI	GCNNNNNNNGC	4 cut(s)	38, 71, 347, 530
NdeII	GATC	2 cut(s)	493, 651
NlaIII	CATG	7 cut(s)	61, 197, 385, 406, 431, 595, 712
NlaIV	GGNNCC	3 cut(s)	525, 644, 756
NmuCI	GTSAC	1 cut(s)	370
NspI	RCATGY	1 cut(s)	197
PctI	GAATGC	1 cut(s)	608
PflMI	CCANNNNNTGG	1 cut(s)	751
PkrI	GCNGC	3 cut(s)	155, 166, 691
PleI	GAGTC	1 cut(s)	47
PpsI	GAGTC	1 cut(s)	47
Psp6I	CCWGG	1 cut(s)	561
PspFI	CCCAGC	2 cut(s)	107, 598
PspGI	CCWGG	1 cut(s)	561
PspN4I	GGNNCC	3 cut(s)	525, 644, 756
PspPI	GGNCC	4 cut(s)	30, 572, 614, 665
PstNI	CAGNNNCTG	1 cut(s)	167
PsuI	RGATCY	1 cut(s)	651
PvuII	CAGCTG	1 cut(s)	167
RsaI	GTAC	1 cut(s)	707
RsaNI	GTAC	1 cut(s)	706
SaqAI	TTAA	1 cut(s)	231
SatI	GCNGC	3 cut(s)	154, 165, 690
Sau3AI	GATC	2 cut(s)	493, 651
Sau96I	GGNCC	4 cut(s)	30, 572, 614, 665
SchI	GAGTC	1 cut(s)	47
ScrFI	CCNGG	1 cut(s)	563
SduI	GDGCHC	1 cut(s)	277
SfaNI	GCATC	1 cut(s)	596
SfiI	GGCCNNNNNGGCC	1 cut(s)	38
SinI	GGWCC	1 cut(s)	665
Sse9I	AATT	2 cut(s)	77, 534
SsiI	CCGC	2 cut(s)	153, 570
SspMI	CTAG	2 cut(s)	440, 769
StyD4I	CCNGG	1 cut(s)	561
StyI	CCWWGG	2 cut(s)	334, 750
TaaI	ACNGT	2 cut(s)	391, 475
TaiI	ACGT	2 cut(s)	237, 252
TasI	AATT	2 cut(s)	77, 534
TatI	WGTACW	1 cut(s)	705
TauI	GCSGC	1 cut(s)	156
Tru1I	TTAA	1 cut(s)	231
Tru9I	TTAA	1 cut(s)	231
TscAI	CASTG	4 cut(s)	396, 534, 627, 653
TseFI	GTSAC	1 cut(s)	370
TseI	GCWGC	2 cut(s)	164, 689
Tsp45I	GTSAC	1 cut(s)	370
TspDTI	ATGAA	2 cut(s)	82, 608
TspRI	CASTG	4 cut(s)	396, 534, 627, 653
Van91I	CCANNNNNTGG	1 cut(s)	751
VneI	GTGCAC	1 cut(s)	273
VpaK11BI	GGWCC	1 cut(s)	665
XagI	CCTNNNNNAGG	1 cut(s)	25
XapI	RAATTY	1 cut(s)	77
XceI	RCATGY	1 cut(s)	197
XspI	CTAG	2 cut(s)	440, 769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.