Prupe.6G016800_v2.0.a1

Belongs to the universal ribosomal protein uL14 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
1204105 .. 1204940
836 bp
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UTR
Exon/CDS
Intron
Prupe.6G016800.1

Sequence Viewer

Length: 261 bp
ATGAAGATGTCACAGGCTAGACTTTCTGGTAGTCCAAATTTCGAAAGGTGTCATAGGCACGAACTTCCTAGGCACTCTATTAAGTATGAAGCCGTACCAAATACATCTCTAGAAATATCAGAAGTAATCCGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTGTTATTGATCAAGAAGGAAATCCTAAAGGAACCCGAAAAGCGACCCCATAG

Protein Analysis

87

Amino Acids

9.78

Weight (kDa)

9.39

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017165)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 168
AcsI RAATTY 1 cut(s) 37
AfaI GTAC 3 cut(s) 96, 144, 148
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
ApeKI GCWGC 1 cut(s) 203
ApoI RAATTY 1 cut(s) 37
AspA2I CCTAGG 1 cut(s) 68
AsuII TTCGAA 1 cut(s) 42
AvrII CCTAGG 1 cut(s) 68
BbvI GCAGC 1 cut(s) 190
BceAI ACGGC 1 cut(s) 77
BclI TGATCA 1 cut(s) 217
BfaI CTAG 3 cut(s) 18, 69, 110
BfmI CTRYAG 1 cut(s) 204
BisI GCNGC 1 cut(s) 204
BlnI CCTAGG 1 cut(s) 68
BlsI GCNGC 1 cut(s) 205
BmiI GGNNCC 1 cut(s) 241
Bpu14I TTCGAA 1 cut(s) 42
BsaAI YACGTR 1 cut(s) 146
BsaJI CCNNGG 1 cut(s) 68
BseDI CCNNGG 1 cut(s) 68
BseXI GCAGC 1 cut(s) 190
Bsh1236I CGCG 1 cut(s) 168
Bsp119I TTCGAA 1 cut(s) 42
Bsp143I GATC 1 cut(s) 217
BspFNI CGCG 1 cut(s) 168
BspLI GGNNCC 1 cut(s) 241
BspMAI CTGCAG 1 cut(s) 208
BspT104I TTCGAA 1 cut(s) 42
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 1 cut(s) 217
BssT1I CCWWGG 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 176
BstBAI YACGTR 1 cut(s) 146
BstBI TTCGAA 1 cut(s) 42
BstFNI CGCG 1 cut(s) 168
BstKTI GATC 1 cut(s) 220
BstMBI GATC 1 cut(s) 217
BstSFI CTRYAG 1 cut(s) 204
BstSNI TACGTA 1 cut(s) 146
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 1 cut(s) 190
Csp6I GTAC 3 cut(s) 95, 143, 147
CviJI RGCY 3 cut(s) 17, 92, 134
CviKI_1 RGCY 3 cut(s) 17, 92, 134
CviQI GTAC 3 cut(s) 95, 143, 147
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
Eco105I TACGTA 1 cut(s) 146
Eco130I CCWWGG 1 cut(s) 68
EcoT14I CCWWGG 1 cut(s) 68
ErhI CCWWGG 1 cut(s) 68
FaiI YATR 5 cut(s) 54, 87, 179, 192, 259
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 1 cut(s) 204
Fsp4HI GCNGC 1 cut(s) 204
FspBI CTAG 3 cut(s) 18, 69, 110
GluI GCNGC 1 cut(s) 204
Hpy188I TCNGA 2 cut(s) 121, 131
Hpy188III TCNNGA 2 cut(s) 110, 221
HpyAV CCTTC 1 cut(s) 218
HpyCH4III ACNGT 1 cut(s) 176
HpyCH4IV ACGT 1 cut(s) 145
HpyCH4V TGCA 1 cut(s) 206
HpySE526I ACGT 1 cut(s) 145
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 1 cut(s) 217
LpnPI CCDG 1 cut(s) 12
Lsp1109I GCAGC 1 cut(s) 190
MaeI CTAG 3 cut(s) 18, 69, 110
MaeII ACGT 1 cut(s) 145
MaeIII GTNAC 1 cut(s) 9
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MboII GAAGA 1 cut(s) 16
MluCI AATT 2 cut(s) 37, 138
MseI TTAA 1 cut(s) 81
MvnI CGCG 1 cut(s) 168
NdeII GATC 1 cut(s) 217
NlaIV GGNNCC 1 cut(s) 241
NmuCI GTSAC 1 cut(s) 9
NspV TTCGAA 1 cut(s) 42
PkrI GCNGC 1 cut(s) 205
Ppu21I YACGTR 1 cut(s) 146
PspN4I GGNNCC 1 cut(s) 241
PstI CTGCAG 1 cut(s) 208
RsaI GTAC 3 cut(s) 96, 144, 148
RsaNI GTAC 3 cut(s) 95, 143, 147
SaqAI TTAA 1 cut(s) 81
SatI GCNGC 1 cut(s) 204
Sau3AI GATC 1 cut(s) 217
SetI ASST 3 cut(s) 50, 136, 148
SfcI CTRYAG 1 cut(s) 204
SfuI TTCGAA 1 cut(s) 42
SnaBI TACGTA 1 cut(s) 146
Sse9I AATT 2 cut(s) 37, 138
SspMI CTAG 3 cut(s) 18, 69, 110
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 1 cut(s) 176
TaiI ACGT 1 cut(s) 148
TaqI TCGA 1 cut(s) 42
TasI AATT 2 cut(s) 37, 138
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TseFI GTSAC 1 cut(s) 9
TseI GCWGC 1 cut(s) 203
Tsp45I GTSAC 1 cut(s) 9
TspDTI ATGAA 2 cut(s) 17, 102
XapI RAATTY 1 cut(s) 37
XbaI TCTAGA 1 cut(s) 109
XmaJI CCTAGG 1 cut(s) 68
XspI CTAG 3 cut(s) 18, 69, 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.