Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006803

Physical Location & Seq

Genomic Coordinates Forward (+)

11610794 .. 11615037

Gene Structure 4244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G143200.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGGGTGAGTGGAAAAGGCATAGAATTCTCATGGTCTCTGATTTTTTCTATCCCAACTTTGGTGGTGTTGAGAATCACATCTATTATCTCTCACAATGCCTTCTCAAGCTTGGTCACAAGCTAAGGGGGTTGAAAGTGTACTATGTACCATGGAAACCGTTTCTTATGCAGAATACTTTTCCAACCTTTTATGGGACACTTCCAATAGTAAGGACTATCCTTATTCGAGAGAAAATATCCCTGGTACATGGACATCAAGCTTTCTCAACTCTTTGCCATGAGGCTTTGATGCATGCACGCACAATGGGGTACAAGGTCGTATTTACTGATCATTCACTCTATGGTTTTGCTGATGCGGGAAGTATACACATGAACAAGGTGTTGCAATTTACATTGGCAGAAGTAAGTCAGGCCATTTGTGTTTCTCTTACAAGCAAGGAAAACACAGTGCTACGGTCAGGTTTGCCACCAGAAAAGGTCTTTGTGATACCTAATGCTGTTGACACAGCTATGTTCAAGCCTGCACCAGAGCGCCTGAGTAGTCATGAAATTGTAATTGTTGTTATAAGTAGATTGGTTGACCGAAAGGGTGCAGATCTTCTCGTTGAAGTCATTCCAGAAGTATGCCGTTACCCCAATGTTCGTTTCATTGTTGGAGGAGATGGACCGAAACGTGTGCGGTTGGAAGAGATGAGGGAAAAACATTCTCTTCAAGATCGAGTTGAGTTGTTAGGTGCCGTGCAACACTCTCAATTCTTTAACAGAAGCTTTTTCATAGCGATCTTAGAGGCTGCTAGTTGTGGATTATTAACAGTCAGTACATGTGTAGGAGGTGTCCCGGAGGTACTACCAGATGACATGATTGTACTTGCAAAACCAGATCCTAGTGATATGGTTCAAGCAATAAAGAAGGCAATATCTATACTTCCCAAAATCGACCCACAAGAAATGCACAATCATATGAAGGAGCTGTACAATTGGCATGATGTGGCGAAACGGACAGAAATTGTTTATGACCGTGCTCTGAAATGCTCAAATCAAAATCTTTTACAACGACTTTCACGGTCTTGGGCTGGAAAGGTTTTTTGCTTGGTTATGATCATTGACTTTCTGTTATGCCACCTGTTGCAACTATGGAAGCCTGCAGAGGATATTGAAGAAGTGCCCGATTTCATTCTATCCCATGATCAAGATGAAGGGATCTCGCAGGACAATGAGAACCAAAGCTTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000506 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009893 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016254 GO:0016740 GO:0016757 GO:0016758 GO:0017176 GO:0019222 GO:0019538 GO:0019637 GO:0022414 GO:0030154 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034645 GO:0036211 GO:0040007 GO:0042157 GO:0042158 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0051704 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0090407 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Glycos_transf_1 PIGA

Protein Analysis

412

Amino Acids

46.84

Weight (kDa)

6.99

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45100 AT3G45100 AT3G45100
fragaria_vesca	FvH4_3g45430 FvH4_3g45430 FvH4_3g45430 FvH4_3g45430 FvH4_3g45430 FvH4_3g45430 FvH4_3g45430 FvH4_3g45430
malus_domestica	MD11G1006700.v1.1 MD11G1007700.v1.1
prunus_persica	Prupe.6G004900_v2.0.a1 Prupe.6G143200_v2.0.a1
pyrus_communis	pycom11g00520
rosa_chinensis	RchiOBHm_Chr5g0083231
rosa_laevigata	RLG00000037021
rosa_multiflora	Rmu_ssc0000026.1_g000010
rosa_roxburghii	Rroxscaffold_1G00001260
rosa_rugosa	Rorug05G0483600
rosa_samantha	Rh5AG532900 Rh5BG560100 Rh5CG582800 Rh5DG569400
rosa_wichuraiana	Rw5G050000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
AccB1I	GGYRCC	1 cut(s)	734
AccI	GTMKAC	1 cut(s)	364
AciI	CCGC	2 cut(s)	356, 679
AclWI	GGATC	2 cut(s)	875, 1208
AcsI	RAATTY	1 cut(s)	24
AfaI	GTAC	8 cut(s)	140, 147, 246, 311, 820, 846, 867, 974
AfiI	CCNNNNNNNGG	2 cut(s)	59, 192
AflIII	ACRYGT	2 cut(s)	673, 821
AgsI	TTSAA	6 cut(s)	133, 517, 608, 713, 899, 1157
AjnI	CCWGG	1 cut(s)	240
AjuI	GAANNNNNNNTTGG	2 cut(s)	629, 661
AluBI	AGCT	7 cut(s)	109, 121, 260, 509, 768, 970, 1227
AluI	AGCT	7 cut(s)	109, 121, 260, 509, 768, 970, 1227
Alw21I	GWGCWC	1 cut(s)	1024
Alw26I	GTCTC	1 cut(s)	40
AlwI	GGATC	2 cut(s)	875, 1208
AoxI	GGCC	1 cut(s)	411
ApeKI	GCWGC	1 cut(s)	791
ApoI	RAATTY	1 cut(s)	24
Asp700I	GAANNNNTTC	1 cut(s)	612
AspLEI	GCGC	1 cut(s)	534
AspS9I	GGNCC	1 cut(s)	665
AsuC2I	CCSGG	1 cut(s)	839
AsuHPI	GGTGA	1 cut(s)	17
AvaII	GGWCC	1 cut(s)	665
BaeGI	GKGCMC	1 cut(s)	1167
BanI	GGYRCC	1 cut(s)	734
BarI	GAAGNNNNNNTAC	2 cut(s)	956, 988
Bbv12I	GWGCWC	1 cut(s)	1024
BbvI	GCAGC	1 cut(s)	778
BccI	CCATC	1 cut(s)	656
BceAI	ACGGC	2 cut(s)	612, 722
BcgI	CGANNNNNNTGC	2 cut(s)	658, 692
BciT130I	CCWGG	1 cut(s)	242
BclI	TGATCA	3 cut(s)	328, 1098, 1186
BcnI	CCSGG	1 cut(s)	839
BcoDI	GTCTC	1 cut(s)	40
BfaI	CTAG	2 cut(s)	795, 885
BfmI	CTRYAG	1 cut(s)	1143
BfoI	RGCGCY	1 cut(s)	535
BglII	AGATCT	1 cut(s)	595
BisI	GCNGC	1 cut(s)	792
BlsI	GCNGC	1 cut(s)	793
Bme1390I	CCNGG	2 cut(s)	242, 839
Bme18I	GGWCC	1 cut(s)	665
BmgT120I	GGNCC	1 cut(s)	665
BmiI	GGNNCC	1 cut(s)	736
BmrFI	CCNGG	2 cut(s)	242, 839
BmsI	GCATC	2 cut(s)	279, 343
Bpu10I	CCTNAGC	1 cut(s)	122
BpuEI	CTTGAG	1 cut(s)	89
BpuMI	CCSGG	1 cut(s)	839
BsaI	GGTCTC	1 cut(s)	40
BsaJI	CCNNGG	2 cut(s)	149, 240
Bsc4I	CCNNNNNNNGG	2 cut(s)	59, 192
BseBI	CCWGG	1 cut(s)	242
BseDI	CCNNGG	2 cut(s)	149, 240
BseLI	CCNNNNNNNGG	2 cut(s)	59, 192
BseMII	CTCAG	1 cut(s)	527
BseRI	GAGGAG	1 cut(s)	672
BseSI	GKGCMC	1 cut(s)	1167
BseXI	GCAGC	1 cut(s)	778
BsgI	GTGCAG	2 cut(s)	507, 612
BshFI	GGCC	1 cut(s)	413
BshNI	GGYRCC	1 cut(s)	734
BsiHKAI	GWGCWC	1 cut(s)	1024
BsiSI	CCGG	1 cut(s)	839
BslFI	GGGAC	2 cut(s)	208, 821
BslI	CCNNNNNNNGG	2 cut(s)	59, 192
BsmAI	GTCTC	1 cut(s)	40
BsmFI	GGGAC	2 cut(s)	208, 821
BsnI	GGCC	1 cut(s)	413
Bso31I	GGTCTC	1 cut(s)	40
Bsp1286I	GDGCHC	2 cut(s)	1024, 1167
Bsp1407I	TGTACA	1 cut(s)	972
Bsp143I	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
Bsp19I	CCATGG	1 cut(s)	149
BspACI	CCGC	2 cut(s)	356, 679
BspANI	GGCC	1 cut(s)	413
BspCNI	CTCAG	1 cut(s)	528
BspHI	TCATGA	1 cut(s)	544
BspLI	GGNNCC	1 cut(s)	736
BspMAI	CTGCAG	1 cut(s)	1147
BspPI	GGATC	2 cut(s)	875, 1208
BspT107I	GGYRCC	1 cut(s)	734
BspTNI	GGTCTC	1 cut(s)	40
BsrGI	TGTACA	1 cut(s)	972
BssECI	CCNNGG	2 cut(s)	149, 240
BssMI	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
BssNAI	GTATAC	1 cut(s)	365
BssT1I	CCWWGG	1 cut(s)	149
Bst1107I	GTATAC	1 cut(s)	365
Bst2UI	CCWGG	1 cut(s)	242
Bst4CI	ACNGT	6 cut(s)	159, 448, 456, 814, 1019, 1065
Bst6I	CTCTTC	2 cut(s)	681, 714
BstAUI	TGTACA	1 cut(s)	972
BstC8I	GCNNGC	4 cut(s)	294, 298, 522, 1143
BstDEI	CTNAG	3 cut(s)	122, 536, 784
BstDSI	CCRYGG	1 cut(s)	149
BstH2I	RGCGCY	1 cut(s)	535
BstHHI	GCGC	1 cut(s)	534
BstKTI	GATC	8 cut(s)	331, 598, 718, 783, 883, 1101, 1189, 1203
BstMAI	GTCTC	1 cut(s)	40
BstMBI	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
BstNI	CCWGG	1 cut(s)	242
BstNSI	RCATGY	2 cut(s)	296, 825
BstSCI	CCNGG	2 cut(s)	240, 837
BstSFI	CTRYAG	1 cut(s)	1143
BstSLI	GKGCMC	1 cut(s)	1167
BstV1I	GCAGC	1 cut(s)	778
BstX2I	RGATCY	3 cut(s)	595, 880, 1200
BstYI	RGATCY	3 cut(s)	595, 880, 1200
BstZ17I	GTATAC	1 cut(s)	365
BsuRI	GGCC	1 cut(s)	413
BtgI	CCRYGG	1 cut(s)	149
BtsIMutI	CAGTG	1 cut(s)	453
Cac8I	GCNNGC	4 cut(s)	294, 298, 522, 1143
CciI	TCATGA	1 cut(s)	544
CfoI	GCGC	1 cut(s)	534
Cfr13I	GGNCC	1 cut(s)	665
Csp6I	GTAC	8 cut(s)	139, 146, 245, 310, 819, 845, 866, 973
CspCI	CAANNNNNGTGG	2 cut(s)	43, 78
CviQI	GTAC	8 cut(s)	139, 146, 245, 310, 819, 845, 866, 973
DdeI	CTNAG	3 cut(s)	122, 536, 784
DpnI	GATC	8 cut(s)	330, 597, 717, 782, 882, 1100, 1188, 1202
DpnII	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
Eam1104I	CTCTTC	2 cut(s)	681, 714
EarI	CTCTTC	2 cut(s)	681, 714
Eco130I	CCWWGG	1 cut(s)	149
Eco31I	GGTCTC	1 cut(s)	40
Eco47I	GGWCC	1 cut(s)	665
EcoRI	GAATTC	1 cut(s)	24
EcoRII	CCWGG	1 cut(s)	240
EcoT14I	CCWWGG	1 cut(s)	149
EcoT22I	ATGCAT	1 cut(s)	294
ErhI	CCWWGG	1 cut(s)	149
FaqI	GGGAC	2 cut(s)	208, 821
FauI	CCCGC	1 cut(s)	349
FauNDI	CATATG	1 cut(s)	960
FbaI	TGATCA	3 cut(s)	328, 1098, 1186
FblI	GTMKAC	1 cut(s)	364
Fnu4HI	GCNGC	1 cut(s)	792
Fsp4HI	GCNGC	1 cut(s)	792
FspBI	CTAG	2 cut(s)	795, 885
GlaI	GCGC	1 cut(s)	533
GluI	GCNGC	1 cut(s)	792
HaeII	RGCGCY	1 cut(s)	535
HaeIII	GGCC	1 cut(s)	413
HapII	CCGG	1 cut(s)	839
HhaI	GCGC	1 cut(s)	534
Hin6I	GCGC	1 cut(s)	532
HinP1I	GCGC	1 cut(s)	532
HincII	GTYRAC	2 cut(s)	502, 580
HindII	GTYRAC	2 cut(s)	502, 580
HindIII	AAGCTT	4 cut(s)	107, 258, 766, 1225
HinfI	GANTC	1 cut(s)	73
HpaII	CCGG	1 cut(s)	839
HphI	GGTGA	1 cut(s)	17
Hpy166II	GTNNAC	4 cut(s)	139, 365, 502, 580
Hpy188I	TCNGA	2 cut(s)	40, 1026
Hpy188III	TCNNGA	5 cut(s)	227, 545, 617, 713, 1190
Hpy8I	GTNNAC	4 cut(s)	139, 365, 502, 580
HpyAV	CCTTC	4 cut(s)	110, 904, 958, 1190
HpyCH4III	ACNGT	6 cut(s)	159, 448, 456, 814, 1019, 1065
HpyCH4IV	ACGT	1 cut(s)	673
HpyF3I	CTNAG	3 cut(s)	122, 536, 784
HpySE526I	ACGT	1 cut(s)	673
HspAI	GCGC	1 cut(s)	532
Ksp22I	TGATCA	3 cut(s)	328, 1098, 1186
Kzo9I	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
LmnI	GCTCC	1 cut(s)	967
Lsp1109I	GCAGC	1 cut(s)	778
LweI	GCATC	2 cut(s)	279, 343
MaeI	CTAG	2 cut(s)	795, 885
MaeII	ACGT	1 cut(s)	673
MaeIII	GTNAC	2 cut(s)	113, 629
MalI	GATC	8 cut(s)	330, 597, 717, 782, 882, 1100, 1188, 1202
MboI	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
MboII	GAAGA	4 cut(s)	590, 698, 701, 1169
MfeI	CAATTG	1 cut(s)	976
MflI	RGATCY	3 cut(s)	595, 880, 1200
MhlI	GDGCHC	2 cut(s)	1024, 1167
MluCI	AATT	7 cut(s)	24, 386, 549, 555, 752, 976, 1005
MmeI	TCCRAC	3 cut(s)	206, 634, 663
MnlI	CCTC	7 cut(s)	274, 650, 687, 781, 824, 835, 1141
Mph1103I	ATGCAT	1 cut(s)	294
MroXI	GAANNNNTTC	1 cut(s)	612
MseI	TTAA	2 cut(s)	759, 809
MslI	CAYNNNNRTG	1 cut(s)	509
MspI	CCGG	1 cut(s)	839
MspR9I	CCNGG	2 cut(s)	242, 839
MunI	CAATTG	1 cut(s)	976
MvaI	CCWGG	1 cut(s)	242
NciI	CCSGG	1 cut(s)	839
NcoI	CCATGG	1 cut(s)	149
NdeI	CATATG	1 cut(s)	960
NdeII	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
NlaIV	GGNNCC	1 cut(s)	736
NmuCI	GTSAC	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	294
NspI	RCATGY	2 cut(s)	296, 825
PaeI	GCATGC	1 cut(s)	296
PagI	TCATGA	1 cut(s)	544
PciI	ACATGT	1 cut(s)	821
PdmI	GAANNNNTTC	1 cut(s)	612
PfeI	GAWTC	1 cut(s)	73
PfoI	TCCNGGA	1 cut(s)	837
PkrI	GCNGC	1 cut(s)	793
PscI	ACATGT	1 cut(s)	821
PsiI	TTATAA	1 cut(s)	566
Psp6I	CCWGG	1 cut(s)	240
PspGI	CCWGG	1 cut(s)	240
PspN4I	GGNNCC	1 cut(s)	736
PspPI	GGNCC	1 cut(s)	665
PstI	CTGCAG	1 cut(s)	1147
PsuI	RGATCY	3 cut(s)	595, 880, 1200
RsaI	GTAC	8 cut(s)	140, 147, 246, 311, 820, 846, 867, 974
RsaNI	GTAC	8 cut(s)	139, 146, 245, 310, 819, 845, 866, 973
RseI	CAYNNNNRTG	1 cut(s)	509
SaqAI	TTAA	2 cut(s)	759, 809
SatI	GCNGC	1 cut(s)	792
Sau3AI	GATC	8 cut(s)	328, 595, 715, 780, 880, 1098, 1186, 1200
Sau96I	GGNCC	1 cut(s)	665
ScrFI	CCNGG	2 cut(s)	242, 839
SduI	GDGCHC	2 cut(s)	1024, 1167
SfaNI	GCATC	2 cut(s)	279, 343
SfcI	CTRYAG	1 cut(s)	1143
SinI	GGWCC	1 cut(s)	665
SmiMI	CAYNNNNRTG	1 cut(s)	509
SmlI	CTYRAG	2 cut(s)	104, 1228
SmoI	CTYRAG	2 cut(s)	104, 1228
SphI	GCATGC	1 cut(s)	296
Sse9I	AATT	7 cut(s)	24, 386, 549, 555, 752, 976, 1005
SsiI	CCGC	2 cut(s)	356, 679
SspMI	CTAG	2 cut(s)	795, 885
StyD4I	CCNGG	2 cut(s)	240, 837
StyI	CCWWGG	1 cut(s)	149
TaaI	ACNGT	6 cut(s)	159, 448, 456, 814, 1019, 1065
TaiI	ACGT	1 cut(s)	676
TaqI	TCGA	3 cut(s)	226, 718, 936
TaqII	GACCGA	2 cut(s)	597, 682
TasI	AATT	7 cut(s)	24, 386, 549, 555, 752, 976, 1005
TatI	WGTACW	4 cut(s)	138, 818, 865, 972
TfiI	GAWTC	1 cut(s)	73
Tru1I	TTAA	2 cut(s)	759, 809
Tru9I	TTAA	2 cut(s)	759, 809
TscAI	CASTG	1 cut(s)	453
TseFI	GTSAC	1 cut(s)	113
TseI	GCWGC	1 cut(s)	791
Tsp45I	GTSAC	1 cut(s)	113
TspDTI	ATGAA	7 cut(s)	386, 561, 637, 763, 977, 1162, 1209
TspGWI	ACGGA	1 cut(s)	1012
TspRI	CASTG	1 cut(s)	453
VpaK11BI	GGWCC	1 cut(s)	665
XapI	RAATTY	1 cut(s)	24
XceI	RCATGY	2 cut(s)	296, 825
XmiI	GTMKAC	1 cut(s)	364
XmnI	GAANNNNTTC	1 cut(s)	612
XspI	CTAG	2 cut(s)	795, 885
Zsp2I	ATGCAT	1 cut(s)	294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.