No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09960 AT5G09960 AT5G09960 AT5G64850 |
| fragaria_vesca | FvH4_1g22590 |
| malus_domestica | MD01G1020100.v1.1 MD15G1332200.v1.1 |
| prunus_persica | Prupe.6G172200_v2.0.a1 Prupe.6G172200_v2.0.a1 Prupe.6G172200_v2.0.a1 |
| pyrus_communis | pycom01g04950 pycom15g29320 |
| rosa_chinensis | RchiOBHm_Chr2g0116611 |
| rosa_laevigata | RLG00000018293 |
| rosa_multiflora | Rmu_sc0004191.1_g000009 Rmu_sc0004942.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00127020 |
| rosa_rugosa | Rorug02G0207900 |
| rosa_samantha | Rh2AG263000 Rh2BG274700 Rh2DG271200 Rh2DG289800 |
| rosa_wichuraiana | Rw2G020710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 240 |
| AclWI | GGATC | 2 cut(s) | 15, 69 |
| AcuI | CTGAAG | 1 cut(s) | 256 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 50, 51, 52 |
| AgsI | TTSAA | 1 cut(s) | 283 |
| AluBI | AGCT | 2 cut(s) | 191, 276 |
| AluI | AGCT | 2 cut(s) | 191, 276 |
| AlwI | GGATC | 2 cut(s) | 15, 69 |
| AoxI | GGCC | 1 cut(s) | 70 |
| AspS9I | GGNCC | 1 cut(s) | 70 |
| BaeGI | GKGCMC | 1 cut(s) | 45 |
| BanI | GGYRCC | 1 cut(s) | 240 |
| BccI | CCATC | 1 cut(s) | 240 |
| BmgT120I | GGNCC | 1 cut(s) | 70 |
| BmiI | GGNNCC | 2 cut(s) | 201, 242 |
| BmrI | ACTGGG | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 276 |
| BmuI | ACTGGG | 1 cut(s) | 67 |
| BsaJI | CCNNGG | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 50, 51, 52 |
| Bse1I | ACTGG | 2 cut(s) | 62, 150 |
| Bse3DI | GCAATG | 1 cut(s) | 174 |
| BseDI | CCNNGG | 1 cut(s) | 29 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 50, 51, 52 |
| BseMI | GCAATG | 1 cut(s) | 174 |
| BseNI | ACTGG | 2 cut(s) | 62, 150 |
| BseSI | GKGCMC | 1 cut(s) | 45 |
| BshFI | GGCC | 1 cut(s) | 72 |
| BshNI | GGYRCC | 1 cut(s) | 240 |
| BslFI | GGGAC | 2 cut(s) | 62, 68 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 50, 51, 52 |
| BsmFI | GGGAC | 2 cut(s) | 62, 68 |
| BsnI | GGCC | 1 cut(s) | 72 |
| Bsp1286I | GDGCHC | 1 cut(s) | 45 |
| Bsp143I | GATC | 2 cut(s) | 7, 61 |
| Bsp19I | CCATGG | 1 cut(s) | 29 |
| BspANI | GGCC | 1 cut(s) | 72 |
| BspLI | GGNNCC | 2 cut(s) | 201, 242 |
| BspPI | GGATC | 2 cut(s) | 15, 69 |
| BspT107I | GGYRCC | 1 cut(s) | 240 |
| BsrDI | GCAATG | 1 cut(s) | 174 |
| BsrI | ACTGG | 2 cut(s) | 62, 150 |
| BssECI | CCNNGG | 1 cut(s) | 29 |
| BssMI | GATC | 2 cut(s) | 7, 61 |
| BssT1I | CCWWGG | 1 cut(s) | 29 |
| BstDSI | CCRYGG | 1 cut(s) | 29 |
| BstKTI | GATC | 2 cut(s) | 10, 64 |
| BstMBI | GATC | 2 cut(s) | 7, 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 273 |
| BstSLI | GKGCMC | 1 cut(s) | 45 |
| BsuRI | GGCC | 1 cut(s) | 72 |
| BtgI | CCRYGG | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| Cfr13I | GGNCC | 1 cut(s) | 70 |
| CviAII | CATG | 1 cut(s) | 30 |
| CviJI | RGCY | 5 cut(s) | 72, 149, 191, 276, 299 |
| CviKI_1 | RGCY | 5 cut(s) | 72, 149, 191, 276, 299 |
| DpnI | GATC | 2 cut(s) | 9, 63 |
| DpnII | GATC | 2 cut(s) | 7, 61 |
| Eco130I | CCWWGG | 1 cut(s) | 29 |
| Eco57I | CTGAAG | 1 cut(s) | 256 |
| EcoT14I | CCWWGG | 1 cut(s) | 29 |
| ErhI | CCWWGG | 1 cut(s) | 29 |
| FaeI | CATG | 1 cut(s) | 33 |
| FaiI | YATR | 1 cut(s) | 31 |
| FaqI | GGGAC | 2 cut(s) | 62, 68 |
| FatI | CATG | 1 cut(s) | 29 |
| HaeIII | GGCC | 1 cut(s) | 72 |
| Hin1II | CATG | 1 cut(s) | 33 |
| Hpy188I | TCNGA | 2 cut(s) | 66, 237 |
| Hpy188III | TCNNGA | 2 cut(s) | 92, 144 |
| HpyAV | CCTTC | 2 cut(s) | 61, 255 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 273 |
| Hsp92II | CATG | 1 cut(s) | 33 |
| Kzo9I | GATC | 2 cut(s) | 7, 61 |
| LmnI | GCTCC | 1 cut(s) | 264 |
| LpnPI | CCDG | 4 cut(s) | 43, 93, 157, 163 |
| LweI | GCATC | 1 cut(s) | 276 |
| MalI | GATC | 2 cut(s) | 9, 63 |
| MboI | GATC | 2 cut(s) | 7, 61 |
| MboII | GAAGA | 3 cut(s) | 176, 179, 262 |
| MfeI | CAATTG | 1 cut(s) | 283 |
| MhlI | GDGCHC | 1 cut(s) | 45 |
| MluCI | AATT | 2 cut(s) | 47, 283 |
| MmeI | TCCRAC | 1 cut(s) | 275 |
| MnlI | CCTC | 3 cut(s) | 111, 213, 231 |
| MunI | CAATTG | 1 cut(s) | 283 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 273 |
| NcoI | CCATGG | 1 cut(s) | 29 |
| NdeII | GATC | 2 cut(s) | 7, 61 |
| NlaIII | CATG | 1 cut(s) | 33 |
| NlaIV | GGNNCC | 2 cut(s) | 201, 242 |
| PspN4I | GGNNCC | 2 cut(s) | 201, 242 |
| PspPI | GGNCC | 1 cut(s) | 70 |
| Sau3AI | GATC | 2 cut(s) | 7, 61 |
| Sau96I | GGNCC | 1 cut(s) | 70 |
| SduI | GDGCHC | 1 cut(s) | 45 |
| SetI | ASST | 3 cut(s) | 193, 205, 278 |
| SfaNI | GCATC | 1 cut(s) | 276 |
| Sse9I | AATT | 2 cut(s) | 47, 283 |
| StyI | CCWWGG | 1 cut(s) | 29 |
| TaqI | TCGA | 2 cut(s) | 10, 259 |
| TasI | AATT | 2 cut(s) | 47, 283 |
| TscAI | CASTG | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 177 |
| TspRI | CASTG | 1 cut(s) | 45 |