Prupe.6G220900_v2.0.a1

Peptidyl-prolyl cis-trans isomerase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
22647879 .. 22651992
4114 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G220900.1

Sequence Viewer

Length: 1785 bp
ATGGGGAAGAAACAGCACAGCAAAGATCGAATGTTCATCACCAAGACGGAGTGGGCCACCGAATGGGGTGGTGCCAAAGCCAAGTCTACCTCCACTCCTTTCAAACGCCTCCCGTTCTATTGCTGCGCGCTTACGTTTACGCCTTTTGAAGACCCAGTGTGCACGGCAGACGGCAGTGTTTTCGATATACTGAATATAATTCCCTATATCCGAAAGTATGGAAAGCATCCCGTCACCGGAACTCCATTGAAGCAGGAGGAGCTCATACCACTAACGTTCCACAAGAATGCTGATGGAGAGTTTCAGTGCCCTGTTTTAAACAAAGTTTTCACTGAATTTACACACATAGTTGCTGTGAAGACAACAGGAAATGTCTTCTGCTATGAGGCAGTTAAAGAACTAAACATCAAGACCAAGAACTGGAAGGAGCTCCTCACAGATGAACCATTTTCTAGGCAAGATCTGATAACCATTCAGAATCCCAATGCACTTGATAGCAAGGTTCTTGTGGAATTCGATCATGTTAAAAATAGTTTGAAAATTGATGATGAAGAATTCAAGAGAATGAGTTCCGACCCAACCTATAACATAAATGTAACTGGAGATATCAAGCAGATGCTCAAGGAGCTTGGAACTGAAAAAGGAAGGCAAACTGCTCTGCATGGAGGAGGTGGCAGCAAGGCACAAAATGAACGGGCTGCTGCACTTGAAGCCATTTTAGCTGCAAGATCACGTATTAAAGAGGATCCTAAATCAAATTCGAATGGGGAGGCTCCTCAGGCGTACAGTATTGTAGATGCTGCTTCTGCTTCAGTGCATGGAAGAAGTGCTGCTGCCGCAAAAGCCACATCAAGTGATAAAACTGCAGCTCGAATAGCTATGCACAAGGCTGGTGAGAGGGCACCAGTGAATGCAAAGATGGTAAAGAGCAAATTCACCACTGGTGCTGCTTCGAGATCTTTCACTTCTACTGCCTTTGATCCTGTTACTGAAAATGAATTTGAATATGTCAAAGTTGAGAAGAATCCGAAAAAGAAAGGATATGTACAGCTACATACAACACATGGTGATTTGAACATTGAGCTACACTGTGATATAACCCCCAGGGCTTGCGAGAACTTCATAACTCTTTGTGAACGTGGCTATTATAATGGAGTAGCTTTTCACAGAAGCATTAGGAATTTTATGATTCAAGGTGGTGATCCTACTGGTACTGGAAAAGGAGGAGAATCTATATGGGGAAAGCCTTTTAATGATGAATTGAACTCCAAGTTACTTCACTCTGGAAGGGGTGTTGTCAGTATGGCTAACAGTGGGCCCCACACTAATGGCTCCCAGTTTTTCATCCTTTACAAGTCTGCAAATCATTTGAACTTTAAGCACACGGTTTTTGGTGGAGTCGTTGGTGGCTTGACAACACTGGCAACAATGGAAAAGGTTCCTGTTGATGACAATGACAAACCTTTGGAGGAAATTAAGATAACAGGTGTCACAATTTTTGTTAATCCTTACACAGAGCCTGATGAAGAGGAAGAAGAGGCCAAAGCTGAGGAGAAAGCTGAGGATGAAGATAAGGACAAGATTGGGTCTTGGTATAGCAATCCGGTTACAGGAACAGTAGAATCTGGATCTGCTGGTGGTGGTGGTGTTGGGAAGTACTTGAAAGCAAGGAGTGCTCTACCTGAATCTGCTGCAGTTAATGCTGGTTCGACGGAGCTTGCTTCGACAAAGAAAAGGAAATTGGGAGTTTCCGCAACAAACTACAATAATTTTTCTTCATGGTAA

Protein Analysis

595

Amino Acids

64.98

Weight (kDa)

7.61

Isoelectric Point (pI)

35.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015177)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G67530
fragaria_vesca FvH4_1g17680
malus_domestica MD02G1185800.v1.1 MD15G1307700.v1.1
prunus_persica Prupe.6G220900_v2.0.a1
pyrus_communis pycom02g15080 pycom15g26020
rosa_chinensis RchiOBHm_Chr2g0108011
rosa_laevigata RLG00000017633
rosa_multiflora Rmu_sc0001484.1_g000022
rosa_roxburghii Rroxscaffold_2G00135730
rosa_rugosa Rorug02G0149700
rosa_samantha Rh2AG198700 Rh2BG211600 Rh2CG203300
rosa_wichuraiana Rw2G015770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1149
AccB1I GGYRCC 2 cut(s) 71, 901
AccB7I CCANNNNNTGG 2 cut(s) 63, 420
AccI GTMKAC 1 cut(s) 86
AccII CGCG 1 cut(s) 128
AciI CCGC 2 cut(s) 837, 1752
AclI AACGTT 1 cut(s) 275
AclWI GGATC 5 cut(s) 740, 753, 974, 1196, 1636
AcsI RAATTY 7 cut(s) 335, 512, 554, 757, 932, 998, 1180
AcuI CTGAAG 1 cut(s) 795
AdeI CACNNNGTG 1 cut(s) 1067
AfaI GTAC 4 cut(s) 785, 1047, 1213, 1658
AfiI CCNNNNNNNGG 4 cut(s) 63, 236, 420, 1610
AjnI CCWGG 1 cut(s) 1103
AjuI GAANNNNNNNTTGG 2 cut(s) 1724, 1756
Alw21I GWGCWC 4 cut(s) 164, 264, 432, 1678
Alw44I GTGCAC 1 cut(s) 160
AlwI GGATC 5 cut(s) 740, 753, 974, 1196, 1636
AlwNI CAGNNNCTG 1 cut(s) 1520
AoxI GGCC 3 cut(s) 54, 1316, 1539
ApaI GGGCCC 1 cut(s) 1320
ApaLI GTGCAC 1 cut(s) 160
ApoI RAATTY 7 cut(s) 335, 512, 554, 757, 932, 998, 1180
Asp700I GAANNNNTTC 2 cut(s) 568, 1437
AspLEI GCGC 2 cut(s) 128, 130
AspS9I GGNCC 3 cut(s) 54, 1316, 1317
AsuHPI GGTGA 6 cut(s) 31, 226, 905, 928, 1079, 1211
AsuII TTCGAA 1 cut(s) 761
AxyI CCTNAGG 1 cut(s) 777
BaeGI GKGCMC 4 cut(s) 164, 311, 904, 1320
BamHI GGATCC 1 cut(s) 745
BanI GGYRCC 2 cut(s) 71, 901
BanII GRGCYC 3 cut(s) 264, 432, 1320
BbsI GAAGAC 3 cut(s) 156, 365, 367
Bbv12I GWGCWC 4 cut(s) 164, 264, 432, 1678
BbvCI CCTCAGC 2 cut(s) 1548, 1560
BccI CCATC 2 cut(s) 287, 913
BceAI ACGGC 2 cut(s) 180, 187
BcgI CGANNNNNNTGC 2 cut(s) 163, 197
BciT130I CCWGG 1 cut(s) 1105
BfaI CTAG 1 cut(s) 453
BfmI CTRYAG 2 cut(s) 864, 1692
BglII AGATCT 2 cut(s) 460, 956
BmcAI AGTACT 1 cut(s) 1658
Bme1390I CCNGG 1 cut(s) 1105
BmgT120I GGNCC 3 cut(s) 54, 1316, 1317
BmiI GGNNCC 8 cut(s) 73, 747, 774, 903, 1318, 1319, 1333, 1440
BmrFI CCNGG 1 cut(s) 1105
BmrI ACTGGG 2 cut(s) 149, 1330
BmsI GCATC 3 cut(s) 235, 606, 787
BmuI ACTGGG 2 cut(s) 149, 1330
BpiI GAAGAC 3 cut(s) 156, 365, 367
BpmI CTGGAG 1 cut(s) 621
Bpu10I CCTNAGC 2 cut(s) 1548, 1560
Bpu14I TTCGAA 1 cut(s) 761
BpuEI CTTGAG 1 cut(s) 605
BsaAI YACGTR 1 cut(s) 734
BsaJI CCNNGG 2 cut(s) 1103, 1104
BsaWI WCCGGW 2 cut(s) 236, 1603
BsaXI ACNNNNNCTCC 4 cut(s) 79, 109, 226, 256
Bsc4I CCNNNNNNNGG 4 cut(s) 63, 236, 420, 1610
Bse1I ACTGG 9 cut(s) 155, 425, 604, 905, 946, 1213, 1219, 1336, 1425
Bse21I CCTNAGG 1 cut(s) 777
BseBI CCWGG 1 cut(s) 1105
BseDI CCNNGG 2 cut(s) 1103, 1104
BseGI GGATG 3 cut(s) 226, 1344, 1570
BseLI CCNNNNNNNGG 4 cut(s) 63, 236, 420, 1610
BseMII CTCAG 3 cut(s) 791, 1539, 1551
BseNI ACTGG 9 cut(s) 155, 425, 604, 905, 946, 1213, 1219, 1336, 1425
BsePI GCGCGC 1 cut(s) 126
BseRI GAGGAG 6 cut(s) 272, 422, 681, 765, 1239, 1565
BseSI GKGCMC 4 cut(s) 164, 311, 904, 1320
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 1 cut(s) 128
BshFI GGCC 3 cut(s) 56, 1318, 1541
BshNI GGYRCC 2 cut(s) 71, 901
BsiHKAI GWGCWC 4 cut(s) 164, 264, 432, 1678
BsiSI CCGG 2 cut(s) 237, 1604
BslI CCNNNNNNNGG 4 cut(s) 63, 236, 420, 1610
BsmI GAATGC 2 cut(s) 292, 916
BsnI GGCC 3 cut(s) 56, 1318, 1541
Bsp119I TTCGAA 1 cut(s) 761
Bsp120I GGGCCC 1 cut(s) 1316
Bsp1286I GDGCHC 7 cut(s) 164, 264, 311, 432, 904, 1320, 1678
Bsp1407I TGTACA 1 cut(s) 1045
Bsp143I GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
BspACI CCGC 2 cut(s) 837, 1752
BspANI GGCC 3 cut(s) 56, 1318, 1541
BspCNI CTCAG 3 cut(s) 790, 1540, 1552
BspFNI CGCG 1 cut(s) 128
BspLI GGNNCC 8 cut(s) 73, 747, 774, 903, 1318, 1319, 1333, 1440
BspMAI CTGCAG 2 cut(s) 868, 1696
BspPI GGATC 5 cut(s) 740, 753, 974, 1196, 1636
BspT104I TTCGAA 1 cut(s) 761
BspT107I GGYRCC 2 cut(s) 71, 901
BsrGI TGTACA 1 cut(s) 1045
BsrI ACTGG 9 cut(s) 155, 425, 604, 905, 946, 1213, 1219, 1336, 1425
BssECI CCNNGG 2 cut(s) 1103, 1104
BssHII GCGCGC 1 cut(s) 126
BssMI GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
Bst2UI CCWGG 1 cut(s) 1105
Bst4CI ACNGT 5 cut(s) 788, 1091, 1313, 1387, 1618
Bst6I CTCTTC 2 cut(s) 1521, 1530
BstAPI GCANNNNNTGC 2 cut(s) 1673, 1700
BstAUI TGTACA 1 cut(s) 1045
BstBAI YACGTR 1 cut(s) 734
BstBI TTCGAA 1 cut(s) 761
BstC8I GCNNGC 3 cut(s) 128, 1111, 1719
BstDEI CTNAG 3 cut(s) 777, 1548, 1560
BstF5I GGATG 3 cut(s) 226, 1344, 1570
BstFNI CGCG 1 cut(s) 128
BstHHI GCGC 2 cut(s) 128, 130
BstKTI GATC 9 cut(s) 28, 463, 520, 731, 748, 959, 982, 1204, 1631
BstMBI GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
BstNI CCWGG 1 cut(s) 1105
BstSCI CCNGG 1 cut(s) 1103
BstSFI CTRYAG 2 cut(s) 864, 1692
BstSLI GKGCMC 4 cut(s) 164, 311, 904, 1320
BstUI CGCG 1 cut(s) 128
BstV2I GAAGAC 3 cut(s) 156, 365, 367
BstX2I RGATCY 4 cut(s) 460, 745, 956, 1628
BstXI CCANNNNNNTGG 1 cut(s) 1328
BstYI RGATCY 4 cut(s) 460, 745, 956, 1628
Bsu36I CCTNAGG 1 cut(s) 777
BsuRI GGCC 3 cut(s) 56, 1318, 1541
BtsCI GGATG 3 cut(s) 226, 1344, 1570
BtsI GCAGTG 1 cut(s) 181
Cac8I GCNNGC 3 cut(s) 128, 1111, 1719
CaiI CAGNNNCTG 1 cut(s) 1520
CfoI GCGC 2 cut(s) 128, 130
Cfr13I GGNCC 3 cut(s) 54, 1316, 1317
Csp6I GTAC 4 cut(s) 784, 1046, 1212, 1657
CviAII CATG 5 cut(s) 521, 662, 818, 1064, 1779
CviQI GTAC 4 cut(s) 784, 1046, 1212, 1657
DdeI CTNAG 3 cut(s) 777, 1548, 1560
DpnI GATC 9 cut(s) 27, 462, 519, 730, 747, 958, 981, 1203, 1630
DpnII GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
DraI TTTAAA 1 cut(s) 318
DraIII CACNNNGTG 1 cut(s) 1067
Eam1104I CTCTTC 2 cut(s) 1521, 1530
EarI CTCTTC 2 cut(s) 1521, 1530
Ecl136II GAGCTC 2 cut(s) 262, 430
Eco24I GRGCYC 3 cut(s) 264, 432, 1320
Eco32I GATATC 1 cut(s) 607
Eco53kI GAGCTC 2 cut(s) 262, 430
Eco57I CTGAAG 1 cut(s) 795
Eco81I CCTNAGG 1 cut(s) 777
EcoICRI GAGCTC 2 cut(s) 262, 430
EcoO109I RGGNCCY 1 cut(s) 1317
EcoRI GAATTC 2 cut(s) 512, 554
EcoRII CCWGG 1 cut(s) 1103
EcoRV GATATC 1 cut(s) 607
EcoT38I GRGCYC 3 cut(s) 264, 432, 1320
FaeI CATG 5 cut(s) 524, 665, 821, 1067, 1782
FatI CATG 5 cut(s) 520, 661, 817, 1063, 1778
FblI GTMKAC 1 cut(s) 86
FokI GGATG 3 cut(s) 213, 1331, 1577
FriOI GRGCYC 3 cut(s) 264, 432, 1320
FspBI CTAG 1 cut(s) 453
GlaI GCGC 2 cut(s) 127, 129
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 3 cut(s) 56, 1318, 1541
HapII CCGG 2 cut(s) 237, 1604
HhaI GCGC 2 cut(s) 128, 130
Hin1II CATG 5 cut(s) 524, 665, 821, 1067, 1782
Hin6I GCGC 2 cut(s) 126, 128
HinP1I GCGC 2 cut(s) 126, 128
HinfI GANTC 7 cut(s) 478, 1024, 1189, 1229, 1398, 1622, 1685
HpaII CCGG 2 cut(s) 237, 1604
HphI GGTGA 6 cut(s) 31, 226, 905, 928, 1079, 1211
Hpy166II GTNNAC 4 cut(s) 87, 138, 162, 1136
Hpy188I TCNGA 5 cut(s) 212, 465, 477, 574, 1029
Hpy188III TCNNGA 5 cut(s) 409, 559, 954, 1284, 1626
Hpy8I GTNNAC 4 cut(s) 87, 138, 162, 1136
Hpy99I CGWCG 1 cut(s) 1714
HpyAV CCTTC 3 cut(s) 418, 639, 1281
HpyCH4III ACNGT 5 cut(s) 788, 1091, 1313, 1387, 1618
HpyCH4IV ACGT 4 cut(s) 134, 275, 733, 1138
HpyF3I CTNAG 3 cut(s) 777, 1548, 1560
HpySE526I ACGT 4 cut(s) 134, 275, 733, 1138
Hsp92II CATG 5 cut(s) 524, 665, 821, 1067, 1782
HspAI GCGC 2 cut(s) 126, 128
Kzo9I GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
LmnI GCTCC 7 cut(s) 259, 427, 435, 625, 778, 1337, 1714
LweI GCATC 3 cut(s) 235, 606, 787
MaeI CTAG 1 cut(s) 453
MaeII ACGT 4 cut(s) 134, 275, 733, 1138
MaeIII GTNAC 6 cut(s) 232, 595, 985, 1272, 1489, 1606
MalI GATC 9 cut(s) 27, 462, 519, 730, 747, 958, 981, 1203, 1630
MboI GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
MflI RGATCY 4 cut(s) 460, 745, 956, 1628
MhlI GDGCHC 7 cut(s) 164, 264, 311, 432, 904, 1320, 1678
MlyI GAGTC 1 cut(s) 1407
MmeI TCCRAC 1 cut(s) 597
MroXI GAANNNNTTC 2 cut(s) 568, 1437
MseI TTAA 9 cut(s) 317, 393, 525, 738, 1251, 1377, 1476, 1503, 1698
MslI CAYNNNNRTG 2 cut(s) 285, 1326
MspI CCGG 2 cut(s) 237, 1604
MspR9I CCNGG 1 cut(s) 1105
Mva1269I GAATGC 2 cut(s) 292, 916
MvaI CCWGG 1 cut(s) 1105
MvnI CGCG 1 cut(s) 128
NdeII GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
NlaIII CATG 5 cut(s) 524, 665, 821, 1067, 1782
NlaIV GGNNCC 8 cut(s) 73, 747, 774, 903, 1318, 1319, 1333, 1440
NmuCI GTSAC 2 cut(s) 232, 1489
NspV TTCGAA 1 cut(s) 761
PasI CCCWGGG 1 cut(s) 1104
PauI GCGCGC 1 cut(s) 126
PctI GAATGC 2 cut(s) 292, 916
PdmI GAANNNNTTC 2 cut(s) 568, 1437
PfeI GAWTC 6 cut(s) 478, 1024, 1189, 1229, 1622, 1685
PflMI CCANNNNNTGG 2 cut(s) 63, 420
PleI GAGTC 1 cut(s) 1406
PpsI GAGTC 1 cut(s) 1406
Ppu21I YACGTR 1 cut(s) 734
PsiI TTATAA 1 cut(s) 1149
Psp124BI GAGCTC 2 cut(s) 264, 432
Psp1406I AACGTT 1 cut(s) 275
Psp6I CCWGG 1 cut(s) 1103
PspGI CCWGG 1 cut(s) 1103
PspN4I GGNNCC 8 cut(s) 73, 747, 774, 903, 1318, 1319, 1333, 1440
PspOMI GGGCCC 1 cut(s) 1316
PspPI GGNCC 3 cut(s) 54, 1316, 1317
PstI CTGCAG 2 cut(s) 868, 1696
PstNI CAGNNNCTG 1 cut(s) 1520
PsuI RGATCY 4 cut(s) 460, 745, 956, 1628
PteI GCGCGC 1 cut(s) 126
RsaI GTAC 4 cut(s) 785, 1047, 1213, 1658
RsaNI GTAC 4 cut(s) 784, 1046, 1212, 1657
RseI CAYNNNNRTG 2 cut(s) 285, 1326
SacI GAGCTC 2 cut(s) 264, 432
SaqAI TTAA 9 cut(s) 317, 393, 525, 738, 1251, 1377, 1476, 1503, 1698
Sau3AI GATC 9 cut(s) 25, 460, 517, 728, 745, 956, 979, 1201, 1628
Sau96I GGNCC 3 cut(s) 54, 1316, 1317
ScaI AGTACT 1 cut(s) 1658
SchI GAGTC 1 cut(s) 1407
ScrFI CCNGG 1 cut(s) 1105
SduI GDGCHC 7 cut(s) 164, 264, 311, 432, 904, 1320, 1678
SfaNI GCATC 3 cut(s) 235, 606, 787
SfcI CTRYAG 2 cut(s) 864, 1692
SfuI TTCGAA 1 cut(s) 761
SmiMI CAYNNNNRTG 2 cut(s) 285, 1326
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
SsiI CCGC 2 cut(s) 837, 1752
SspMI CTAG 1 cut(s) 453
SstI GAGCTC 2 cut(s) 264, 432
StyD4I CCNGG 1 cut(s) 1103
TaaI ACNGT 5 cut(s) 788, 1091, 1313, 1387, 1618
TaiI ACGT 4 cut(s) 137, 278, 736, 1141
TaqI TCGA 8 cut(s) 28, 183, 516, 761, 871, 953, 1709, 1724
TatI WGTACW 2 cut(s) 1045, 1656
TauI GCSGC 1 cut(s) 839
TfiI GAWTC 6 cut(s) 478, 1024, 1189, 1229, 1622, 1685
Tru1I TTAA 9 cut(s) 317, 393, 525, 738, 1251, 1377, 1476, 1503, 1698
Tru9I TTAA 9 cut(s) 317, 393, 525, 738, 1251, 1377, 1476, 1503, 1698
TseFI GTSAC 2 cut(s) 232, 1489
Tsp45I GTSAC 2 cut(s) 232, 1489
TspGWI ACGGA 2 cut(s) 62, 1727
Van91I CCANNNNNTGG 2 cut(s) 63, 420
VneI GTGCAC 1 cut(s) 160
XapI RAATTY 7 cut(s) 335, 512, 554, 757, 932, 998, 1180
XmiI GTMKAC 1 cut(s) 86
XmnI GAANNNNTTC 2 cut(s) 568, 1437
XspI CTAG 1 cut(s) 453
ZrmI AGTACT 1 cut(s) 1658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.