Prupe.6G257300_v2.0.a1

Haloacid dehalogenase-like hydrolase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
24974285 .. 24977010
2726 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G257300.1

Sequence Viewer

Length: 954 bp
ATGGAACTTAATGTTCGCTTCTTTTTGTCGTCTGCTGAAGGTTTCTTGATCGAAATGGAATTCGACGACCGATACAGGCAAGCTCAGAGGACCAAATACGATTGCCTTCTGTTTGATCTAGATGACACACTATATCCCTACAGTACTGGGATTGCTACAGCATGCAGAAACAATATAGAAGATTATATGGTTGAAAAGCTTGGCATTGAGAGGAGCATAATCCCTGAATTGGGTAACCTGCTGTACAAGAATTATGGAACTACAATGGCTGGTCTCAGGGCTATTGGCTATGACTTTGACTATGATGAATATCACAGTTTTGTCCATGGAAGATTACCTTATGAGAACATAAAACCTGACCCGGTTTTGAGGAACCTTCTGCTGAACCTGCCTTATCGGAAAATCATATTCACAAATGCAGACAAGGTCCATGCTGCTAAAGCACTAAGCAGGCTTGGATTGGAAGACTGTTTTGAAGGGATTATTTGCTTTGAGACCCTCAATCCTACTCACAAAAGCATTGTCTCTGATGATGAAGATGACATTGAGTTTGTGGGACCTGCAGCTGAAGTTCCTGCAACAACAACTAGCAGCTCTCAAATTTTTGACATCATTGGCCATTTTGCTCAACAAAACCCCACTTCCAAATTACCCAAAACACCAATTGTGTGCAAACCATCAGAAGCCGCCATAGAACGGGCTCTCAAGATAGCCAACATTGATCCTCAGAGAACACTGTTCTTTGAAGATAGCGTCCGCAACATACAAGCTGGCAAAAGAGTGGGACTTCAAACTGTGCTGATTGGGACATCCCAGAGAGTTAAAGGCGCAGATTATGCACTAGAAAGCATTCACAACCTCAGGGAAGCACTGCCAGAGCTTTGGGAGGTTGAAATGATATCTGAAGTTCGTTACTCTGGGAAGGTTGCAGTGGAGACATCAGTCACAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

318

Amino Acids

35.78

Weight (kDa)

4.96

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011735)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 246, 396, 568
AciI CCGC 2 cut(s) 687, 757
AclWI GGATC 1 cut(s) 716
AcoI YGGCCR 1 cut(s) 616
AcsI RAATTY 2 cut(s) 59, 600
AcuI CTGAAG 3 cut(s) 57, 588, 924
AfaI GTAC 2 cut(s) 145, 245
AfiI CCNNNNNNNGG 3 cut(s) 229, 230, 696
AgsI TTSAA 5 cut(s) 194, 476, 746, 791, 893
AluBI AGCT 7 cut(s) 83, 199, 566, 594, 770, 880, 950
AluI AGCT 7 cut(s) 83, 199, 566, 594, 770, 880, 950
Alw26I GTCTC 4 cut(s) 278, 488, 529, 929
AlwI GGATC 1 cut(s) 716
AoxI GGCC 1 cut(s) 616
ApeKI GCWGC 3 cut(s) 434, 563, 591
ApoI RAATTY 2 cut(s) 59, 600
ArsI GACNNNNNNTTYG 4 cut(s) 507, 533, 539, 565
Asp700I GAANNNNTTC 1 cut(s) 849
AspLEI GCGC 1 cut(s) 830
AspS9I GGNCC 3 cut(s) 90, 427, 557
AsuC2I CCSGG 1 cut(s) 362
AvaII GGWCC 3 cut(s) 90, 427, 557
AxyI CCTNAGG 1 cut(s) 860
BalI TGGCCA 1 cut(s) 618
BanII GRGCYC 1 cut(s) 703
BbsI GAAGAC 1 cut(s) 471
BbvI GCAGC 3 cut(s) 421, 575, 603
BccI CCATC 1 cut(s) 685
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 4 cut(s) 278, 488, 529, 929
BfaI CTAG 3 cut(s) 119, 588, 842
BfmI CTRYAG 3 cut(s) 139, 156, 561
BfuAI ACCTGC 3 cut(s) 246, 396, 568
BisI GCNGC 4 cut(s) 435, 564, 592, 687
BlsI GCNGC 4 cut(s) 436, 565, 593, 688
BmcAI AGTACT 1 cut(s) 145
Bme1390I CCNGG 1 cut(s) 362
Bme18I GGWCC 3 cut(s) 90, 427, 557
BmgT120I GGNCC 3 cut(s) 90, 427, 557
BmiI GGNNCC 2 cut(s) 374, 558
BmrFI CCNGG 1 cut(s) 362
BmrI ACTGGG 1 cut(s) 156
BmuI ACTGGG 1 cut(s) 156
BoxI GACNNNNGTC 1 cut(s) 941
BpiI GAAGAC 1 cut(s) 471
BpuEI CTTGAG 1 cut(s) 689
BpuMI CCSGG 1 cut(s) 362
BsaBI GATNNNNATC 1 cut(s) 309
BsaI GGTCTC 2 cut(s) 278, 488
BsaJI CCNNGG 1 cut(s) 325
Bsc4I CCNNNNNNNGG 3 cut(s) 229, 230, 696
Bse1I ACTGG 1 cut(s) 151
Bse21I CCTNAGG 1 cut(s) 860
Bse8I GATNNNNATC 1 cut(s) 309
BseDI CCNNGG 1 cut(s) 325
BseGI GGATG 1 cut(s) 809
BseJI GATNNNNATC 1 cut(s) 309
BseLI CCNNNNNNNGG 3 cut(s) 229, 230, 696
BseMII CTCAG 4 cut(s) 98, 289, 740, 874
BseNI ACTGG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 226
BseXI GCAGC 3 cut(s) 421, 575, 603
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 1 cut(s) 618
BsiEI CGRYCG 1 cut(s) 70
BsiSI CCGG 1 cut(s) 362
BslFI GGGAC 3 cut(s) 570, 798, 820
BslI CCNNNNNNNGG 3 cut(s) 229, 230, 696
BsmAI GTCTC 4 cut(s) 278, 488, 529, 929
BsmFI GGGAC 3 cut(s) 570, 798, 820
BsmI GAATGC 1 cut(s) 849
BsnI GGCC 1 cut(s) 618
Bso31I GGTCTC 2 cut(s) 278, 488
Bsp1286I GDGCHC 1 cut(s) 703
Bsp1407I TGTACA 1 cut(s) 243
Bsp143I GATC 3 cut(s) 48, 115, 721
Bsp19I CCATGG 1 cut(s) 325
BspACI CCGC 2 cut(s) 687, 757
BspANI GGCC 1 cut(s) 618
BspCNI CTCAG 4 cut(s) 97, 288, 739, 873
BspLI GGNNCC 2 cut(s) 374, 558
BspMAI CTGCAG 1 cut(s) 565
BspMI ACCTGC 3 cut(s) 246, 396, 568
BspPI GGATC 1 cut(s) 716
BspTNI GGTCTC 2 cut(s) 278, 488
BsrGI TGTACA 1 cut(s) 243
BsrI ACTGG 1 cut(s) 151
BssECI CCNNGG 1 cut(s) 325
BssMI GATC 3 cut(s) 48, 115, 721
BssT1I CCWWGG 1 cut(s) 325
Bst4CI ACNGT 5 cut(s) 143, 317, 470, 738, 796
BstAPI GCANNNNNTGC 1 cut(s) 836
BstAUI TGTACA 1 cut(s) 243
BstC8I GCNNGC 4 cut(s) 81, 163, 452, 772
BstDEI CTNAG 6 cut(s) 84, 275, 446, 726, 860, 951
BstDSI CCRYGG 1 cut(s) 325
BstEII GGTNACC 1 cut(s) 233
BstF5I GGATG 1 cut(s) 809
BstHHI GCGC 1 cut(s) 830
BstKTI GATC 3 cut(s) 51, 118, 724
BstMAI GTCTC 4 cut(s) 278, 488, 529, 929
BstMBI GATC 3 cut(s) 48, 115, 721
BstMCI CGRYCG 1 cut(s) 70
BstMWI GCNNNNNNNGC 3 cut(s) 388, 440, 836
BstNSI RCATGY 1 cut(s) 165
BstPAI GACNNNNGTC 1 cut(s) 941
BstPI GGTNACC 1 cut(s) 233
BstSCI CCNGG 1 cut(s) 360
BstSFI CTRYAG 3 cut(s) 139, 156, 561
BstV1I GCAGC 3 cut(s) 421, 575, 603
BstV2I GAAGAC 1 cut(s) 471
BstXI CCANNNNNNTGG 1 cut(s) 882
Bsu36I CCTNAGG 1 cut(s) 860
BsuRI GGCC 1 cut(s) 618
BtgI CCRYGG 1 cut(s) 325
BtsCI GGATG 1 cut(s) 809
BtsI GCAGTG 2 cut(s) 869, 936
BtsIMutI CAGTG 3 cut(s) 734, 869, 936
BveI ACCTGC 3 cut(s) 246, 396, 568
Cac8I GCNNGC 4 cut(s) 81, 163, 452, 772
CfoI GCGC 1 cut(s) 830
Cfr13I GGNCC 3 cut(s) 90, 427, 557
CseI GACGC 1 cut(s) 742
Csp6I GTAC 2 cut(s) 144, 244
CviAII CATG 3 cut(s) 162, 326, 431
CviQI GTAC 2 cut(s) 144, 244
DdeI CTNAG 6 cut(s) 84, 275, 446, 726, 860, 951
DpnI GATC 3 cut(s) 50, 117, 723
DpnII GATC 3 cut(s) 48, 115, 721
EaeI YGGCCR 1 cut(s) 616
Eco130I CCWWGG 1 cut(s) 325
Eco24I GRGCYC 1 cut(s) 703
Eco31I GGTCTC 2 cut(s) 278, 488
Eco32I GATATC 1 cut(s) 900
Eco47I GGWCC 3 cut(s) 90, 427, 557
Eco57I CTGAAG 3 cut(s) 57, 588, 924
Eco81I CCTNAGG 1 cut(s) 860
Eco91I GGTNACC 1 cut(s) 233
EcoO109I RGGNCCY 1 cut(s) 557
EcoO65I GGTNACC 1 cut(s) 233
EcoRI GAATTC 1 cut(s) 59
EcoRV GATATC 1 cut(s) 900
EcoT14I CCWWGG 1 cut(s) 325
EcoT38I GRGCYC 1 cut(s) 703
ErhI CCWWGG 1 cut(s) 325
FaeI CATG 3 cut(s) 165, 329, 434
FalI AAGNNNNNCTT 2 cut(s) 322, 354
FaqI GGGAC 3 cut(s) 570, 798, 820
FatI CATG 3 cut(s) 161, 325, 430
Fnu4HI GCNGC 4 cut(s) 435, 564, 592, 687
FokI GGATG 1 cut(s) 796
FriOI GRGCYC 1 cut(s) 703
Fsp4HI GCNGC 4 cut(s) 435, 564, 592, 687
FspBI CTAG 3 cut(s) 119, 588, 842
GlaI GCGC 1 cut(s) 829
GluI GCNGC 4 cut(s) 435, 564, 592, 687
HaeIII GGCC 1 cut(s) 618
HapII CCGG 1 cut(s) 362
HgaI GACGC 1 cut(s) 742
HhaI GCGC 1 cut(s) 830
Hin1II CATG 3 cut(s) 165, 329, 434
Hin6I GCGC 1 cut(s) 828
HinP1I GCGC 1 cut(s) 828
HindIII AAGCTT 1 cut(s) 197
HpaII CCGG 1 cut(s) 362
Hpy188I TCNGA 6 cut(s) 87, 399, 529, 682, 729, 904
Hpy188III TCNNGA 3 cut(s) 46, 119, 706
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 5 cut(s) 32, 116, 386, 470, 916
HpyCH4III ACNGT 5 cut(s) 143, 317, 470, 738, 796
HpyCH4V TGCA 7 cut(s) 165, 419, 563, 578, 672, 839, 929
HpyF10VI GCNNNNNNNGC 3 cut(s) 388, 440, 836
HpyF3I CTNAG 6 cut(s) 84, 275, 446, 726, 860, 951
Hsp92II CATG 3 cut(s) 165, 329, 434
HspAI GCGC 1 cut(s) 828
Kzo9I GATC 3 cut(s) 48, 115, 721
LmnI GCTCC 1 cut(s) 213
Lsp1109I GCAGC 3 cut(s) 421, 575, 603
MaeI CTAG 3 cut(s) 119, 588, 842
MaeIII GTNAC 3 cut(s) 233, 911, 943
MalI GATC 3 cut(s) 50, 117, 723
MboI GATC 3 cut(s) 48, 115, 721
MboII GAAGA 5 cut(s) 191, 342, 476, 548, 758
MfeI CAATTG 1 cut(s) 663
MhlI GDGCHC 1 cut(s) 703
MlsI TGGCCA 1 cut(s) 618
MluCI AATT 6 cut(s) 59, 227, 250, 600, 647, 663
MluNI TGGCCA 1 cut(s) 618
MnlI CCTC 7 cut(s) 81, 204, 363, 509, 735, 869, 880
Mox20I TGGCCA 1 cut(s) 618
MroXI GAANNNNTTC 1 cut(s) 849
MscI TGGCCA 1 cut(s) 618
MseI TTAA 2 cut(s) 9, 822
Msp20I TGGCCA 1 cut(s) 618
MspA1I CMGCKG 1 cut(s) 566
MspI CCGG 1 cut(s) 362
MspR9I CCNGG 1 cut(s) 362
MunI CAATTG 1 cut(s) 663
Mva1269I GAATGC 1 cut(s) 849
MwoI GCNNNNNNNGC 3 cut(s) 388, 440, 836
NciI CCSGG 1 cut(s) 362
NcoI CCATGG 1 cut(s) 325
NdeII GATC 3 cut(s) 48, 115, 721
NlaIII CATG 3 cut(s) 165, 329, 434
NlaIV GGNNCC 2 cut(s) 374, 558
NmuCI GTSAC 1 cut(s) 943
NspI RCATGY 1 cut(s) 165
PaeI GCATGC 1 cut(s) 165
PctI GAATGC 1 cut(s) 849
PdmI GAANNNNTTC 1 cut(s) 849
PflFI GACNNNGTC 1 cut(s) 425
PkrI GCNGC 4 cut(s) 436, 565, 593, 688
PpuMI RGGWCCY 1 cut(s) 557
PshAI GACNNNNGTC 1 cut(s) 941
Psp5II RGGWCCY 1 cut(s) 557
PspEI GGTNACC 1 cut(s) 233
PspN4I GGNNCC 2 cut(s) 374, 558
PspPI GGNCC 3 cut(s) 90, 427, 557
PspPPI RGGWCCY 1 cut(s) 557
PstI CTGCAG 1 cut(s) 565
PsyI GACNNNGTC 1 cut(s) 425
PvuII CAGCTG 1 cut(s) 566
RsaI GTAC 2 cut(s) 145, 245
RsaNI GTAC 2 cut(s) 144, 244
SaqAI TTAA 2 cut(s) 9, 822
SatI GCNGC 4 cut(s) 435, 564, 592, 687
Sau3AI GATC 3 cut(s) 48, 115, 721
Sau96I GGNCC 3 cut(s) 90, 427, 557
ScaI AGTACT 1 cut(s) 145
ScrFI CCNGG 1 cut(s) 362
SduI GDGCHC 1 cut(s) 703
SfcI CTRYAG 3 cut(s) 139, 156, 561
SinI GGWCC 3 cut(s) 90, 427, 557
SmlI CTYRAG 1 cut(s) 704
SmoI CTYRAG 1 cut(s) 704
SphI GCATGC 1 cut(s) 165
Sse9I AATT 6 cut(s) 59, 227, 250, 600, 647, 663
SsiI CCGC 2 cut(s) 687, 757
SspMI CTAG 3 cut(s) 119, 588, 842
StyD4I CCNGG 1 cut(s) 360
StyI CCWWGG 1 cut(s) 325
TaaI ACNGT 5 cut(s) 143, 317, 470, 738, 796
TaqI TCGA 2 cut(s) 51, 63
TaqII GACCGA 1 cut(s) 84
TasI AATT 6 cut(s) 59, 227, 250, 600, 647, 663
TatI WGTACW 2 cut(s) 143, 243
TauI GCSGC 1 cut(s) 689
Tru1I TTAA 2 cut(s) 9, 822
Tru9I TTAA 2 cut(s) 9, 822
TscAI CASTG 3 cut(s) 741, 876, 936
TseFI GTSAC 1 cut(s) 943
TseI GCWGC 3 cut(s) 434, 563, 591
Tsp45I GTSAC 1 cut(s) 943
TspDTI ATGAA 2 cut(s) 321, 549
TspRI CASTG 3 cut(s) 741, 876, 936
Tth111I GACNNNGTC 1 cut(s) 425
VpaK11BI GGWCC 3 cut(s) 90, 427, 557
XapI RAATTY 2 cut(s) 59, 600
XbaI TCTAGA 1 cut(s) 118
XceI RCATGY 1 cut(s) 165
XmnI GAANNNNTTC 1 cut(s) 849
XspI CTAG 3 cut(s) 119, 588, 842
ZrmI AGTACT 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.