Prupe.6G263700_v2.0.a1

Dynein light chain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
25318326 .. 25320311
1986 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G263700.1

Sequence Viewer

Length: 348 bp
ATGCTGGAAGGAAAAGCTGTGGTGCGAGAAACAGATATGCCACATGCCATGCAGAGCCATGCCATGGAGTTGGCTTACAAGGCTCTTGATCTCCATGAAGTTTCTGACTGTAGATCCATTGCTCACCATATCAAACAGAAGTTTGATGAAGCTTATGGCTCTGCGTGGCACTGTGTGGTTGGCAAAAACTTTGGATCTTGCATCACACATTTGTGTGGGACTTTCATTTTCTTCCATGTGGAGATGATGGAGTTTCTCATATTCAAGGATGGCAAAGACTCTACTGAAAGCAGGGAAGAAGCTATTGGTGTGCTGCAGACGGAAAGCCAAGACAGTGATGATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

116

Amino Acids

12.97

Weight (kDa)

5.08

Isoelectric Point (pI)

44.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016876)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g12840
malus_domestica MD04G1137700.v1.1 MD12G1152600.v1.1
prunus_persica Prupe.6G263700_v2.0.a1
pyrus_communis pycom04g12610
rosa_chinensis RchiOBHm_Chr3g0464841
rosa_laevigata RLG00000024670
rosa_multiflora Rmu_sc0007114.1_g000005
rosa_roxburghii Rroxscaffold_6G00415400
rosa_rugosa Rorug03G0074300
rosa_samantha Rh3BG137100 Rh3CG139700 Rh3DG138500
rosa_wichuraiana Rw3G011200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 64
AclWI GGATC 2 cut(s) 108, 202
AdeI CACNNNGTG 1 cut(s) 175
AfiI CCNNNNNNNGG 1 cut(s) 64
AgsI TTSAA 1 cut(s) 265
AjuI GAANNNNNNNTTGG 2 cut(s) 288, 320
AleI CACNNNNGTG 1 cut(s) 211
AluBI AGCT 3 cut(s) 17, 152, 302
AluI AGCT 3 cut(s) 17, 152, 302
AlwI GGATC 2 cut(s) 108, 202
ApeKI GCWGC 1 cut(s) 313
AsuHPI GGTGA 1 cut(s) 116
BbvI GCAGC 1 cut(s) 300
BccI CCATC 2 cut(s) 241, 263
BfmI CTRYAG 2 cut(s) 109, 314
BisI GCNGC 1 cut(s) 314
BlsI GCNGC 1 cut(s) 315
BmsI GCATC 2 cut(s) 210, 331
BsaJI CCNNGG 1 cut(s) 63
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse3DI GCAATG 1 cut(s) 117
BseDI CCNNGG 1 cut(s) 63
BseGI GGATG 1 cut(s) 274
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMI GCAATG 1 cut(s) 117
BseXI GCAGC 1 cut(s) 300
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 1 cut(s) 64
BsmFI GGGAC 1 cut(s) 232
Bsp143I GATC 3 cut(s) 88, 113, 194
Bsp19I CCATGG 1 cut(s) 63
BspMAI CTGCAG 1 cut(s) 318
BspPI GGATC 2 cut(s) 108, 202
BsrDI GCAATG 1 cut(s) 117
BssECI CCNNGG 1 cut(s) 63
BssMI GATC 3 cut(s) 88, 113, 194
BssT1I CCWWGG 1 cut(s) 63
Bst4CI ACNGT 3 cut(s) 110, 173, 335
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 1 cut(s) 274
BstKTI GATC 3 cut(s) 91, 116, 197
BstMBI GATC 3 cut(s) 88, 113, 194
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNSI RCATGY 1 cut(s) 47
BstSFI CTRYAG 2 cut(s) 109, 314
BstV1I GCAGC 1 cut(s) 300
BstX2I RGATCY 2 cut(s) 113, 194
BstXI CCANNNNNNTGG 1 cut(s) 70
BstYI RGATCY 2 cut(s) 113, 194
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 1 cut(s) 274
BtsIMutI CAGTG 2 cut(s) 169, 340
CviAII CATG 6 cut(s) 44, 49, 59, 64, 95, 236
CviJI RGCY 8 cut(s) 17, 57, 74, 83, 152, 159, 302, 327
CviKI_1 RGCY 8 cut(s) 17, 57, 74, 83, 152, 159, 302, 327
DpnI GATC 3 cut(s) 90, 115, 196
DpnII GATC 3 cut(s) 88, 113, 194
DraIII CACNNNGTG 1 cut(s) 175
Eco130I CCWWGG 1 cut(s) 63
EcoT14I CCWWGG 1 cut(s) 63
EcoT22I ATGCAT 1 cut(s) 346
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 6 cut(s) 47, 52, 62, 67, 98, 239
FaqI GGGAC 1 cut(s) 232
FatI CATG 6 cut(s) 43, 48, 58, 63, 94, 235
Fnu4HI GCNGC 1 cut(s) 314
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 1 cut(s) 314
GluI GCNGC 1 cut(s) 314
Hin1II CATG 6 cut(s) 47, 52, 62, 67, 98, 239
HindIII AAGCTT 1 cut(s) 150
HinfI GANTC 1 cut(s) 278
HphI GGTGA 1 cut(s) 116
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 1 cut(s) 86
HpyCH4III ACNGT 3 cut(s) 110, 173, 335
HpyCH4V TGCA 4 cut(s) 52, 201, 316, 344
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
Hsp92II CATG 6 cut(s) 47, 52, 62, 67, 98, 239
Kzo9I GATC 3 cut(s) 88, 113, 194
LpnPI CCDG 1 cut(s) 277
Lsp1109I GCAGC 1 cut(s) 300
LweI GCATC 2 cut(s) 210, 331
MalI GATC 3 cut(s) 90, 115, 196
MboI GATC 3 cut(s) 88, 113, 194
MboII GAAGA 2 cut(s) 223, 308
MflI RGATCY 2 cut(s) 113, 194
MlyI GAGTC 1 cut(s) 272
Mph1103I ATGCAT 1 cut(s) 346
MslI CAYNNNNRTG 2 cut(s) 211, 213
MwoI GCNNNNNNNGC 1 cut(s) 80
NcoI CCATGG 1 cut(s) 63
NdeII GATC 3 cut(s) 88, 113, 194
NlaIII CATG 6 cut(s) 47, 52, 62, 67, 98, 239
NsiI ATGCAT 1 cut(s) 346
NspI RCATGY 1 cut(s) 47
OliI CACNNNNGTG 1 cut(s) 211
PflMI CCANNNNNTGG 1 cut(s) 64
PkrI GCNGC 1 cut(s) 315
PleI GAGTC 1 cut(s) 272
PpsI GAGTC 1 cut(s) 272
PstI CTGCAG 1 cut(s) 318
PsuI RGATCY 2 cut(s) 113, 194
RseI CAYNNNNRTG 2 cut(s) 211, 213
SatI GCNGC 1 cut(s) 314
Sau3AI GATC 3 cut(s) 88, 113, 194
SchI GAGTC 1 cut(s) 272
SetI ASST 3 cut(s) 19, 154, 304
SfaNI GCATC 2 cut(s) 210, 331
SfcI CTRYAG 2 cut(s) 109, 314
SmiMI CAYNNNNRTG 2 cut(s) 211, 213
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 3 cut(s) 110, 173, 335
TscAI CASTG 2 cut(s) 176, 340
TseI GCWGC 1 cut(s) 313
TspDTI ATGAA 3 cut(s) 111, 162, 214
TspGWI ACGGA 1 cut(s) 335
TspRI CASTG 2 cut(s) 176, 340
Van91I CCANNNNNTGG 1 cut(s) 64
XceI RCATGY 1 cut(s) 47
Zsp2I ATGCAT 1 cut(s) 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.