Trafficking protein particle complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02280 |
| fragaria_vesca | FvH4_6g08030 |
| malus_domestica | MD12G1203200.v1.1 MD14G1013000.v1.1 |
| prunus_persica | Prupe.6G309100_v2.0.a1 |
| pyrus_communis | pycom12g18970 pycom14g01100 |
| rosa_chinensis | RchiOBHm_Chr3g0457701 |
| rosa_laevigata | RLG00000025193 |
| rosa_multiflora | Rmu_sc0007395.1_g000003 Rmu_sc0028418.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00421560 |
| rosa_rugosa | Rorug03G0022700 |
| rosa_samantha | Rh3AG083400 Rh3CG086200 Rh3DG086800 |
| rosa_wichuraiana | Rw3G007140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 408 |
| AfaI | GTAC | 1 cut(s) | 305 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 161, 385 |
| AgsI | TTSAA | 1 cut(s) | 286 |
| AjnI | CCWGG | 1 cut(s) | 256 |
| AluBI | AGCT | 6 cut(s) | 99, 114, 148, 181, 191, 364 |
| AluI | AGCT | 6 cut(s) | 99, 114, 148, 181, 191, 364 |
| Alw21I | GWGCWC | 2 cut(s) | 183, 366 |
| Alw26I | GTCTC | 1 cut(s) | 284 |
| AlwI | GGATC | 1 cut(s) | 408 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 148 |
| ApeKI | GCWGC | 2 cut(s) | 5, 145 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 329 |
| BanII | GRGCYC | 2 cut(s) | 183, 366 |
| BbsI | GAAGAC | 1 cut(s) | 63 |
| Bbv12I | GWGCWC | 2 cut(s) | 183, 366 |
| BbvI | GCAGC | 2 cut(s) | 17, 157 |
| BccI | CCATC | 2 cut(s) | 76, 334 |
| BciT130I | CCWGG | 1 cut(s) | 258 |
| BcoDI | GTCTC | 1 cut(s) | 284 |
| BisI | GCNGC | 2 cut(s) | 6, 146 |
| BlsI | GCNGC | 2 cut(s) | 7, 147 |
| Bme1390I | CCNGG | 1 cut(s) | 258 |
| BmrFI | CCNGG | 1 cut(s) | 258 |
| BmrI | ACTGGG | 1 cut(s) | 237 |
| BmsI | GCATC | 2 cut(s) | 183, 336 |
| BmuI | ACTGGG | 1 cut(s) | 237 |
| BpiI | GAAGAC | 1 cut(s) | 63 |
| BpuEI | CTTGAG | 1 cut(s) | 121 |
| BsaI | GGTCTC | 1 cut(s) | 284 |
| BsaJI | CCNNGG | 1 cut(s) | 257 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 161, 385 |
| Bse1I | ACTGG | 1 cut(s) | 232 |
| Bse3DI | GCAATG | 1 cut(s) | 208 |
| BseBI | CCWGG | 1 cut(s) | 258 |
| BseDI | CCNNGG | 1 cut(s) | 257 |
| BseGI | GGATG | 1 cut(s) | 87 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 161, 385 |
| BseMI | GCAATG | 1 cut(s) | 208 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BseNI | ACTGG | 1 cut(s) | 232 |
| BseRI | GAGGAG | 1 cut(s) | 173 |
| BseXI | GCAGC | 2 cut(s) | 17, 157 |
| BsiHKAI | GWGCWC | 2 cut(s) | 183, 366 |
| BslFI | GGGAC | 3 cut(s) | 90, 244, 274 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 161, 385 |
| BsmAI | GTCTC | 1 cut(s) | 284 |
| BsmFI | GGGAC | 3 cut(s) | 90, 244, 274 |
| Bso31I | GGTCTC | 1 cut(s) | 284 |
| Bsp1286I | GDGCHC | 2 cut(s) | 183, 366 |
| Bsp1407I | TGTACA | 1 cut(s) | 303 |
| Bsp143I | GATC | 3 cut(s) | 48, 202, 400 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspPI | GGATC | 1 cut(s) | 408 |
| BspTNI | GGTCTC | 1 cut(s) | 284 |
| BsrDI | GCAATG | 1 cut(s) | 208 |
| BsrGI | TGTACA | 1 cut(s) | 303 |
| BsrI | ACTGG | 1 cut(s) | 232 |
| BssECI | CCNNGG | 1 cut(s) | 257 |
| BssMI | GATC | 3 cut(s) | 48, 202, 400 |
| Bst2UI | CCWGG | 1 cut(s) | 258 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 127 |
| BstAUI | TGTACA | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 2 cut(s) | 112, 132 |
| BstDEI | CTNAG | 1 cut(s) | 141 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 383 |
| BstF5I | GGATG | 1 cut(s) | 87 |
| BstKTI | GATC | 3 cut(s) | 51, 205, 403 |
| BstMAI | GTCTC | 1 cut(s) | 284 |
| BstMBI | GATC | 3 cut(s) | 48, 202, 400 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 127, 151, 416 |
| BstNI | CCWGG | 1 cut(s) | 258 |
| BstSCI | CCNGG | 1 cut(s) | 256 |
| BstV1I | GCAGC | 2 cut(s) | 17, 157 |
| BstV2I | GAAGAC | 1 cut(s) | 63 |
| BtsCI | GGATG | 1 cut(s) | 87 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 2 cut(s) | 112, 132 |
| CaiI | CAGNNNCTG | 1 cut(s) | 148 |
| Csp6I | GTAC | 1 cut(s) | 304 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 22, 57 |
| CviAII | CATG | 1 cut(s) | 271 |
| CviJI | RGCY | 9 cut(s) | 18, 99, 114, 148, 181, 191, 256, 364, 419 |
| CviKI_1 | RGCY | 9 cut(s) | 18, 99, 114, 148, 181, 191, 256, 364, 419 |
| CviQI | GTAC | 1 cut(s) | 304 |
| DdeI | CTNAG | 1 cut(s) | 141 |
| DpnI | GATC | 3 cut(s) | 50, 204, 402 |
| DpnII | GATC | 3 cut(s) | 48, 202, 400 |
| Ecl136II | GAGCTC | 2 cut(s) | 181, 364 |
| Eco24I | GRGCYC | 2 cut(s) | 183, 366 |
| Eco31I | GGTCTC | 1 cut(s) | 284 |
| Eco32I | GATATC | 2 cut(s) | 159, 373 |
| Eco53kI | GAGCTC | 2 cut(s) | 181, 364 |
| EcoICRI | GAGCTC | 2 cut(s) | 181, 364 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 383 |
| EcoRII | CCWGG | 1 cut(s) | 256 |
| EcoRV | GATATC | 2 cut(s) | 159, 373 |
| EcoT38I | GRGCYC | 2 cut(s) | 183, 366 |
| FaeI | CATG | 1 cut(s) | 274 |
| FaiI | YATR | 9 cut(s) | 22, 66, 128, 272, 291, 297, 315, 336, 353 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 314, 346 |
| FaqI | GGGAC | 3 cut(s) | 90, 244, 274 |
| FatI | CATG | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 146 |
| FokI | GGATG | 1 cut(s) | 94 |
| FriOI | GRGCYC | 2 cut(s) | 183, 366 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 146 |
| GluI | GCNGC | 2 cut(s) | 6, 146 |
| Hin1II | CATG | 1 cut(s) | 274 |
| HindIII | AAGCTT | 1 cut(s) | 112 |
| Hpy166II | GTNNAC | 1 cut(s) | 306 |
| Hpy188III | TCNNGA | 2 cut(s) | 75, 283 |
| Hpy8I | GTNNAC | 1 cut(s) | 306 |
| HpyAV | CCTTC | 3 cut(s) | 269, 340, 391 |
| HpyCH4V | TGCA | 2 cut(s) | 110, 130 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 127, 151, 416 |
| HpyF3I | CTNAG | 1 cut(s) | 141 |
| Hsp92II | CATG | 1 cut(s) | 274 |
| Kzo9I | GATC | 3 cut(s) | 48, 202, 400 |
| LmnI | GCTCC | 1 cut(s) | 186 |
| LpnPI | CCDG | 6 cut(s) | 24, 213, 243, 270, 371, 392 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 157 |
| LweI | GCATC | 2 cut(s) | 183, 336 |
| MalI | GATC | 3 cut(s) | 50, 204, 402 |
| MboI | GATC | 3 cut(s) | 48, 202, 400 |
| MboII | GAAGA | 3 cut(s) | 43, 63, 197 |
| MhlI | GDGCHC | 2 cut(s) | 183, 366 |
| MluCI | AATT | 2 cut(s) | 9, 299 |
| MnlI | CCTC | 2 cut(s) | 96, 194 |
| MroXI | GAANNNNTTC | 1 cut(s) | 329 |
| MseI | TTAA | 1 cut(s) | 320 |
| MslI | CAYNNNNRTG | 1 cut(s) | 294 |
| MspA1I | CMGCKG | 1 cut(s) | 148 |
| MspR9I | CCNGG | 1 cut(s) | 258 |
| MvaI | CCWGG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 127, 151, 416 |
| NdeII | GATC | 3 cut(s) | 48, 202, 400 |
| NlaIII | CATG | 1 cut(s) | 274 |
| PdmI | GAANNNNTTC | 1 cut(s) | 329 |
| PkrI | GCNGC | 2 cut(s) | 7, 147 |
| Psp124BI | GAGCTC | 2 cut(s) | 183, 366 |
| Psp6I | CCWGG | 1 cut(s) | 256 |
| PspGI | CCWGG | 1 cut(s) | 256 |
| PstNI | CAGNNNCTG | 1 cut(s) | 148 |
| PvuII | CAGCTG | 1 cut(s) | 148 |
| RsaI | GTAC | 1 cut(s) | 305 |
| RsaNI | GTAC | 1 cut(s) | 304 |
| RseI | CAYNNNNRTG | 1 cut(s) | 294 |
| SacI | GAGCTC | 2 cut(s) | 183, 366 |
| SaqAI | TTAA | 1 cut(s) | 320 |
| SatI | GCNGC | 2 cut(s) | 6, 146 |
| Sau3AI | GATC | 3 cut(s) | 48, 202, 400 |
| ScrFI | CCNGG | 1 cut(s) | 258 |
| SduI | GDGCHC | 2 cut(s) | 183, 366 |
| SetI | ASST | 9 cut(s) | 43, 101, 116, 150, 183, 193, 280, 366, 381 |
| SfaNI | GCATC | 2 cut(s) | 183, 336 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 294 |
| SmlI | CTYRAG | 1 cut(s) | 100 |
| SmoI | CTYRAG | 1 cut(s) | 100 |
| Sse9I | AATT | 2 cut(s) | 9, 299 |
| SstI | GAGCTC | 2 cut(s) | 183, 366 |
| StyD4I | CCNGG | 1 cut(s) | 256 |
| TaqI | TCGA | 2 cut(s) | 177, 201 |
| TasI | AATT | 2 cut(s) | 9, 299 |
| TatI | WGTACW | 1 cut(s) | 303 |
| Tru1I | TTAA | 1 cut(s) | 320 |
| Tru9I | TTAA | 1 cut(s) | 320 |
| TscAI | CASTG | 1 cut(s) | 232 |
| TseI | GCWGC | 2 cut(s) | 5, 145 |
| TspDTI | ATGAA | 2 cut(s) | 197, 312 |
| TspGWI | ACGGA | 1 cut(s) | 94 |
| TspRI | CASTG | 1 cut(s) | 232 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 383 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 224 |
| XmnI | GAANNNNTTC | 1 cut(s) | 329 |