Rhodanese-like domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09280 |
| fragaria_vesca | FvH4_6g07770 FvH4_6g07770 FvH4_6g07770 |
| malus_domestica | MD04G1192000.v1.1 |
| prunus_persica | Prupe.6G310600_v2.0.a1 Prupe.6G310600_v2.0.a1 |
| pyrus_communis | pycom04g16950 |
| rosa_chinensis | RchiOBHm_Chr3g0457491 |
| rosa_laevigata | RLG00000025219 |
| rosa_multiflora | Rmu_co8113448.1_g000001 Rmu_co8194280.1_g000001 Rmu_sc0007404.1_g000017 |
| rosa_roxburghii | Rroxscaffold_6G00421830 |
| rosa_rugosa | Rorug03G0020500 |
| rosa_samantha | Rh3AG081200 Rh3BG083300 Rh3CG083500 Rh3DG084700 |
| rosa_wichuraiana | Rw3G006960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 785 |
| AccII | CGCG | 2 cut(s) | 162, 492 |
| AciI | CCGC | 8 cut(s) | 160, 176, 236, 281, 324, 1331, 1367, 1933 |
| AclWI | GGATC | 3 cut(s) | 572, 585, 1481 |
| AcoI | YGGCCR | 1 cut(s) | 157 |
| AcsI | RAATTY | 3 cut(s) | 93, 523, 1737 |
| AcuI | CTGAAG | 3 cut(s) | 239, 336, 1071 |
| AcyI | GRCGYC | 1 cut(s) | 183 |
| AfaI | GTAC | 4 cut(s) | 530, 667, 1324, 1499 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 64, 201, 785, 1456, 1574 |
| AgsI | TTSAA | 5 cut(s) | 274, 301, 1053, 1523, 1865 |
| AjnI | CCWGG | 1 cut(s) | 580 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 51, 83, 1656, 1688 |
| AleI | CACNNNNGTG | 1 cut(s) | 1008 |
| Alw21I | GWGCWC | 4 cut(s) | 114, 485, 1248, 1694 |
| Alw26I | GTCTC | 5 cut(s) | 527, 1087, 1114, 1140, 1639 |
| AlwI | GGATC | 3 cut(s) | 572, 585, 1481 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 413, 1747 |
| Ama87I | CYCGRG | 1 cut(s) | 1693 |
| AoxI | GGCC | 4 cut(s) | 157, 1125, 1565, 1930 |
| ApaI | GGGCCC | 1 cut(s) | 1569 |
| ApeKI | GCWGC | 6 cut(s) | 233, 1111, 1504, 1601, 1610, 1613 |
| ApoI | RAATTY | 3 cut(s) | 93, 523, 1737 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 774 |
| AspLEI | GCGC | 1 cut(s) | 492 |
| AspS9I | GGNCC | 3 cut(s) | 1478, 1565, 1566 |
| AsuC2I | CCSGG | 1 cut(s) | 1451 |
| AsuHPI | GGTGA | 5 cut(s) | 109, 184, 387, 812, 1320 |
| AsuII | TTCGAA | 1 cut(s) | 166 |
| AvaI | CYCGRG | 1 cut(s) | 1693 |
| AvaII | GGWCC | 1 cut(s) | 1478 |
| BaeGI | GKGCMC | 2 cut(s) | 1569, 1630 |
| BamHI | GGATCC | 1 cut(s) | 577 |
| BanII | GRGCYC | 4 cut(s) | 114, 971, 1248, 1569 |
| BauI | CACGAG | 1 cut(s) | 1247 |
| BbsI | GAAGAC | 3 cut(s) | 48, 60, 860 |
| Bbv12I | GWGCWC | 4 cut(s) | 114, 485, 1248, 1694 |
| BbvCI | CCTCAGC | 1 cut(s) | 1107 |
| BbvI | GCAGC | 6 cut(s) | 220, 1098, 1516, 1600, 1613, 1622 |
| BccI | CCATC | 3 cut(s) | 776, 1469, 1568 |
| BceAI | ACGGC | 2 cut(s) | 1112, 1224 |
| BciT130I | CCWGG | 1 cut(s) | 582 |
| BclI | TGATCA | 3 cut(s) | 631, 817, 1909 |
| BcnI | CCSGG | 1 cut(s) | 1451 |
| BcoDI | GTCTC | 5 cut(s) | 527, 1087, 1114, 1140, 1639 |
| BfaI | CTAG | 2 cut(s) | 470, 1928 |
| BfmI | CTRYAG | 3 cut(s) | 429, 452, 1493 |
| BisI | GCNGC | 9 cut(s) | 160, 234, 282, 1112, 1505, 1602, 1611, 1614, 1933 |
| BlpI | GCTNAGC | 2 cut(s) | 1095, 1242 |
| BlsI | GCNGC | 9 cut(s) | 161, 235, 283, 1113, 1506, 1603, 1612, 1615, 1934 |
| Bme1390I | CCNGG | 2 cut(s) | 582, 1451 |
| Bme18I | GGWCC | 1 cut(s) | 1478 |
| BmeT110I | CYCGRG | 1 cut(s) | 1693 |
| BmgT120I | GGNCC | 3 cut(s) | 1478, 1565, 1566 |
| BmiI | GGNNCC | 6 cut(s) | 6, 265, 579, 862, 1566, 1567 |
| BmrFI | CCNGG | 2 cut(s) | 582, 1451 |
| BmrI | ACTGGG | 1 cut(s) | 1668 |
| BmuI | ACTGGG | 1 cut(s) | 1668 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1875 |
| BpiI | GAAGAC | 3 cut(s) | 48, 60, 860 |
| BpmI | CTGGAG | 1 cut(s) | 690 |
| Bpu10I | CCTNAGC | 4 cut(s) | 371, 1107, 1216, 1557 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1095, 1242 |
| Bpu14I | TTCGAA | 1 cut(s) | 166 |
| BpuEI | CTTGAG | 1 cut(s) | 1174 |
| BpuMI | CCSGG | 1 cut(s) | 1451 |
| BsaHI | GRCGYC | 1 cut(s) | 183 |
| BsaI | GGTCTC | 1 cut(s) | 1140 |
| BsaJI | CCNNGG | 5 cut(s) | 154, 259, 1115, 1371, 1783 |
| BsaWI | WCCGGW | 1 cut(s) | 822 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1882, 1912 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 64, 201, 785, 1456, 1574 |
| Bse1I | ACTGG | 3 cut(s) | 673, 1536, 1663 |
| Bse3DI | GCAATG | 4 cut(s) | 228, 1236, 1378, 1611 |
| BseBI | CCWGG | 1 cut(s) | 582 |
| BseDI | CCNNGG | 5 cut(s) | 154, 259, 1115, 1371, 1783 |
| BseGI | GGATG | 4 cut(s) | 520, 933, 1211, 1264 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 64, 201, 785, 1456, 1574 |
| BseMI | GCAATG | 4 cut(s) | 228, 1236, 1378, 1611 |
| BseMII | CTCAG | 5 cut(s) | 1121, 1165, 1233, 1571, 1607 |
| BseNI | ACTGG | 3 cut(s) | 673, 1536, 1663 |
| BseRI | GAGGAG | 4 cut(s) | 143, 1128, 1742, 1745 |
| BseSI | GKGCMC | 2 cut(s) | 1569, 1630 |
| BseX3I | CGGCCG | 1 cut(s) | 157 |
| BseXI | GCAGC | 6 cut(s) | 220, 1098, 1516, 1600, 1613, 1622 |
| BseYI | CCCAGC | 1 cut(s) | 1514 |
| BsgI | GTGCAG | 1 cut(s) | 198 |
| Bsh1236I | CGCG | 2 cut(s) | 162, 492 |
| Bsh1285I | CGRYCG | 1 cut(s) | 160 |
| BshFI | GGCC | 4 cut(s) | 159, 1127, 1567, 1932 |
| BsiEI | CGRYCG | 1 cut(s) | 160 |
| BsiHKAI | GWGCWC | 4 cut(s) | 114, 485, 1248, 1694 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1693 |
| BsiSI | CCGG | 2 cut(s) | 823, 1451 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 64, 201, 785, 1456, 1574 |
| BsmAI | GTCTC | 5 cut(s) | 527, 1087, 1114, 1140, 1639 |
| BsmI | GAATGC | 2 cut(s) | 326, 1189 |
| BsnI | GGCC | 4 cut(s) | 159, 1127, 1567, 1932 |
| Bso31I | GGTCTC | 1 cut(s) | 1140 |
| BsoBI | CYCGRG | 1 cut(s) | 1693 |
| Bsp119I | TTCGAA | 1 cut(s) | 166 |
| Bsp120I | GGGCCC | 1 cut(s) | 1565 |
| Bsp1286I | GDGCHC | 7 cut(s) | 114, 485, 971, 1248, 1569, 1630, 1694 |
| Bsp1407I | TGTACA | 1 cut(s) | 1322 |
| Bsp143I | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1095, 1242 |
| Bsp19I | CCATGG | 1 cut(s) | 1783 |
| BspACI | CCGC | 8 cut(s) | 160, 176, 236, 281, 324, 1331, 1367, 1933 |
| BspANI | GGCC | 4 cut(s) | 159, 1127, 1567, 1932 |
| BspCNI | CTCAG | 5 cut(s) | 1120, 1164, 1234, 1570, 1606 |
| BspFNI | CGCG | 2 cut(s) | 162, 492 |
| BspHI | TCATGA | 1 cut(s) | 1267 |
| BspLI | GGNNCC | 6 cut(s) | 6, 265, 579, 862, 1566, 1567 |
| BspMAI | CTGCAG | 2 cut(s) | 433, 1497 |
| BspPI | GGATC | 3 cut(s) | 572, 585, 1481 |
| BspQI | GCTCTTC | 1 cut(s) | 119 |
| BspT104I | TTCGAA | 1 cut(s) | 166 |
| BspTNI | GGTCTC | 1 cut(s) | 1140 |
| BsrDI | GCAATG | 4 cut(s) | 228, 1236, 1378, 1611 |
| BsrGI | TGTACA | 1 cut(s) | 1322 |
| BsrI | ACTGG | 3 cut(s) | 673, 1536, 1663 |
| BssECI | CCNNGG | 5 cut(s) | 154, 259, 1115, 1371, 1783 |
| BssMI | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| BssNI | GRCGYC | 1 cut(s) | 183 |
| BssSI | CACGAG | 1 cut(s) | 1247 |
| BssT1I | CCWWGG | 3 cut(s) | 259, 1115, 1783 |
| Bst2BI | CACGAG | 1 cut(s) | 1247 |
| Bst2UI | CCWGG | 1 cut(s) | 582 |
| Bst4CI | ACNGT | 7 cut(s) | 196, 774, 1081, 1300, 1549, 1581, 1847 |
| Bst6I | CTCTTC | 3 cut(s) | 27, 119, 1090 |
| BstACI | GRCGYC | 1 cut(s) | 183 |
| BstAUI | TGTACA | 1 cut(s) | 1322 |
| BstBI | TTCGAA | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 4 cut(s) | 279, 956, 1816, 1827 |
| BstDEI | CTNAG | 9 cut(s) | 371, 937, 1095, 1107, 1151, 1216, 1242, 1557, 1593 |
| BstDSI | CCRYGG | 1 cut(s) | 1783 |
| BstEII | GGTNACC | 1 cut(s) | 364 |
| BstF5I | GGATG | 4 cut(s) | 520, 933, 1211, 1264 |
| BstFNI | CGCG | 2 cut(s) | 162, 492 |
| BstHHI | GCGC | 1 cut(s) | 492 |
| BstKTI | GATC | 7 cut(s) | 580, 604, 634, 710, 820, 1489, 1912 |
| BstMAI | GTCTC | 5 cut(s) | 527, 1087, 1114, 1140, 1639 |
| BstMBI | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| BstMCI | CGRYCG | 1 cut(s) | 160 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 489, 912, 1111, 1217, 1375, 1501, 1607, 1610, 1811 |
| BstNI | CCWGG | 1 cut(s) | 582 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1875 |
| BstPI | GGTNACC | 1 cut(s) | 364 |
| BstSCI | CCNGG | 2 cut(s) | 580, 1449 |
| BstSFI | CTRYAG | 3 cut(s) | 429, 452, 1493 |
| BstSLI | GKGCMC | 2 cut(s) | 1569, 1630 |
| BstUI | CGCG | 2 cut(s) | 162, 492 |
| BstV1I | GCAGC | 6 cut(s) | 220, 1098, 1516, 1600, 1613, 1622 |
| BstV2I | GAAGAC | 3 cut(s) | 48, 60, 860 |
| BstX2I | RGATCY | 1 cut(s) | 577 |
| BstYI | RGATCY | 1 cut(s) | 577 |
| BstZI | CGGCCG | 1 cut(s) | 157 |
| BsuRI | GGCC | 4 cut(s) | 159, 1127, 1567, 1932 |
| BtgI | CCRYGG | 1 cut(s) | 1783 |
| BtsCI | GGATG | 4 cut(s) | 520, 933, 1211, 1264 |
| BtsI | GCAGTG | 1 cut(s) | 1783 |
| BtsIMutI | CAGTG | 3 cut(s) | 215, 1529, 1783 |
| Cac8I | GCNNGC | 4 cut(s) | 279, 956, 1816, 1827 |
| CaiI | CAGNNNCTG | 2 cut(s) | 413, 1747 |
| CciI | TCATGA | 1 cut(s) | 1267 |
| CfoI | GCGC | 1 cut(s) | 492 |
| Cfr13I | GGNCC | 3 cut(s) | 1478, 1565, 1566 |
| CseI | GACGC | 1 cut(s) | 172 |
| Csp6I | GTAC | 4 cut(s) | 529, 666, 1323, 1498 |
| CviAII | CATG | 7 cut(s) | 29, 448, 612, 658, 1169, 1268, 1784 |
| CviQI | GTAC | 4 cut(s) | 529, 666, 1323, 1498 |
| DdeI | CTNAG | 9 cut(s) | 371, 937, 1095, 1107, 1151, 1216, 1242, 1557, 1593 |
| DpnI | GATC | 7 cut(s) | 579, 603, 633, 709, 819, 1488, 1911 |
| DpnII | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| DraI | TTTAAA | 1 cut(s) | 1198 |
| EaeI | YGGCCR | 1 cut(s) | 157 |
| EagI | CGGCCG | 1 cut(s) | 157 |
| Eam1104I | CTCTTC | 3 cut(s) | 27, 119, 1090 |
| EarI | CTCTTC | 3 cut(s) | 27, 119, 1090 |
| Ecl136II | GAGCTC | 2 cut(s) | 112, 1246 |
| EclXI | CGGCCG | 1 cut(s) | 157 |
| Eco130I | CCWWGG | 3 cut(s) | 259, 1115, 1783 |
| Eco24I | GRGCYC | 4 cut(s) | 114, 971, 1248, 1569 |
| Eco31I | GGTCTC | 1 cut(s) | 1140 |
| Eco47I | GGWCC | 1 cut(s) | 1478 |
| Eco52I | CGGCCG | 1 cut(s) | 157 |
| Eco53kI | GAGCTC | 2 cut(s) | 112, 1246 |
| Eco57I | CTGAAG | 3 cut(s) | 239, 336, 1071 |
| Eco88I | CYCGRG | 1 cut(s) | 1693 |
| Eco91I | GGTNACC | 1 cut(s) | 364 |
| EcoICRI | GAGCTC | 2 cut(s) | 112, 1246 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1565, 1566 |
| EcoO65I | GGTNACC | 1 cut(s) | 364 |
| EcoRII | CCWGG | 1 cut(s) | 580 |
| EcoT14I | CCWWGG | 3 cut(s) | 259, 1115, 1783 |
| EcoT38I | GRGCYC | 4 cut(s) | 114, 971, 1248, 1569 |
| ErhI | CCWWGG | 3 cut(s) | 259, 1115, 1783 |
| FaeI | CATG | 7 cut(s) | 32, 451, 615, 661, 1172, 1271, 1787 |
| FatI | CATG | 7 cut(s) | 28, 447, 611, 657, 1168, 1267, 1783 |
| FauI | CCCGC | 1 cut(s) | 317 |
| FbaI | TGATCA | 3 cut(s) | 631, 817, 1909 |
| Fnu4HI | GCNGC | 9 cut(s) | 160, 234, 282, 1112, 1505, 1602, 1611, 1614, 1933 |
| FokI | GGATG | 4 cut(s) | 527, 940, 1198, 1271 |
| FriOI | GRGCYC | 4 cut(s) | 114, 971, 1248, 1569 |
| Fsp4HI | GCNGC | 9 cut(s) | 160, 234, 282, 1112, 1505, 1602, 1611, 1614, 1933 |
| FspBI | CTAG | 2 cut(s) | 470, 1928 |
| GlaI | GCGC | 1 cut(s) | 491 |
| GluI | GCNGC | 9 cut(s) | 160, 234, 282, 1112, 1505, 1602, 1611, 1614, 1933 |
| GsaI | CCCAGC | 1 cut(s) | 1518 |
| GsuI | CTGGAG | 1 cut(s) | 690 |
| HaeIII | GGCC | 4 cut(s) | 159, 1127, 1567, 1932 |
| HapII | CCGG | 2 cut(s) | 823, 1451 |
| HgaI | GACGC | 1 cut(s) | 172 |
| HhaI | GCGC | 1 cut(s) | 492 |
| Hin1I | GRCGYC | 1 cut(s) | 183 |
| Hin1II | CATG | 7 cut(s) | 32, 451, 615, 661, 1172, 1271, 1787 |
| Hin6I | GCGC | 1 cut(s) | 490 |
| HinP1I | GCGC | 1 cut(s) | 490 |
| HincII | GTYRAC | 1 cut(s) | 187 |
| HindII | GTYRAC | 1 cut(s) | 187 |
| HindIII | AAGCTT | 1 cut(s) | 1823 |
| HinfI | GANTC | 8 cut(s) | 168, 242, 675, 997, 1155, 1307, 1526, 1871 |
| HpaII | CCGG | 2 cut(s) | 823, 1451 |
| HphI | GGTGA | 5 cut(s) | 109, 184, 387, 812, 1320 |
| Hpy166II | GTNNAC | 2 cut(s) | 187, 330 |
| Hpy188III | TCNNGA | 5 cut(s) | 98, 720, 779, 1268, 1559 |
| Hpy8I | GTNNAC | 2 cut(s) | 187, 330 |
| Hpy99I | CGWCG | 1 cut(s) | 110 |
| HpyAV | CCTTC | 5 cut(s) | 130, 958, 1344, 1635, 1767 |
| HpyCH4III | ACNGT | 7 cut(s) | 196, 774, 1081, 1300, 1549, 1581, 1847 |
| HpyCH4IV | ACGT | 2 cut(s) | 189, 732 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 489, 912, 1111, 1217, 1375, 1501, 1607, 1610, 1811 |
| HpyF3I | CTNAG | 9 cut(s) | 371, 937, 1095, 1107, 1151, 1216, 1242, 1557, 1593 |
| HpySE526I | ACGT | 2 cut(s) | 189, 732 |
| Hsp92I | GRCGYC | 1 cut(s) | 183 |
| Hsp92II | CATG | 7 cut(s) | 32, 451, 615, 661, 1172, 1271, 1787 |
| HspAI | GCGC | 1 cut(s) | 490 |
| Ksp22I | TGATCA | 3 cut(s) | 631, 817, 1909 |
| Kzo9I | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| LguI | GCTCTTC | 1 cut(s) | 119 |
| LmnI | GCTCC | 2 cut(s) | 1375, 1598 |
| Lsp1109I | GCAGC | 6 cut(s) | 220, 1098, 1516, 1600, 1613, 1622 |
| MaeI | CTAG | 2 cut(s) | 470, 1928 |
| MaeII | ACGT | 2 cut(s) | 189, 732 |
| MaeIII | GTNAC | 5 cut(s) | 190, 364, 1300, 1778, 1855 |
| MalI | GATC | 7 cut(s) | 579, 603, 633, 709, 819, 1488, 1911 |
| MboI | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| MflI | RGATCY | 1 cut(s) | 577 |
| MhlI | GDGCHC | 7 cut(s) | 114, 485, 971, 1248, 1569, 1630, 1694 |
| MluCI | AATT | 9 cut(s) | 93, 342, 359, 523, 540, 1065, 1271, 1318, 1737 |
| MlyI | GAGTC | 3 cut(s) | 251, 1316, 1865 |
| MmeI | TCCRAC | 2 cut(s) | 156, 492 |
| MroXI | GAANNNNTTC | 1 cut(s) | 774 |
| MseI | TTAA | 4 cut(s) | 1046, 1197, 1715, 1942 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1008 |
| MspA1I | CMGCKG | 3 cut(s) | 1111, 1514, 1613 |
| MspI | CCGG | 2 cut(s) | 823, 1451 |
| MspR9I | CCNGG | 2 cut(s) | 582, 1451 |
| Mva1269I | GAATGC | 2 cut(s) | 326, 1189 |
| MvaI | CCWGG | 1 cut(s) | 582 |
| MvnI | CGCG | 2 cut(s) | 162, 492 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 489, 912, 1111, 1217, 1375, 1501, 1607, 1610, 1811 |
| NciI | CCSGG | 1 cut(s) | 1451 |
| NcoI | CCATGG | 1 cut(s) | 1783 |
| NdeII | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| NlaIII | CATG | 7 cut(s) | 32, 451, 615, 661, 1172, 1271, 1787 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 265, 579, 862, 1566, 1567 |
| NmeAIII | GCCGAG | 1 cut(s) | 135 |
| NmuCI | GTSAC | 3 cut(s) | 190, 1300, 1778 |
| NspV | TTCGAA | 1 cut(s) | 166 |
| OliI | CACNNNNGTG | 1 cut(s) | 1008 |
| PagI | TCATGA | 1 cut(s) | 1267 |
| PciSI | GCTCTTC | 1 cut(s) | 119 |
| PctI | GAATGC | 2 cut(s) | 326, 1189 |
| PdmI | GAANNNNTTC | 1 cut(s) | 774 |
| PfeI | GAWTC | 5 cut(s) | 168, 675, 997, 1155, 1526 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 785 |
| PkrI | GCNGC | 9 cut(s) | 161, 235, 283, 1113, 1506, 1603, 1612, 1615, 1934 |
| PleI | GAGTC | 3 cut(s) | 250, 1315, 1865 |
| PpsI | GAGTC | 3 cut(s) | 250, 1315, 1865 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1875 |
| Psp124BI | GAGCTC | 2 cut(s) | 114, 1248 |
| Psp6I | CCWGG | 1 cut(s) | 580 |
| PspEI | GGTNACC | 1 cut(s) | 364 |
| PspFI | CCCAGC | 1 cut(s) | 1514 |
| PspGI | CCWGG | 1 cut(s) | 580 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 265, 579, 862, 1566, 1567 |
| PspOMI | GGGCCC | 1 cut(s) | 1565 |
| PspPI | GGNCC | 3 cut(s) | 1478, 1565, 1566 |
| PstI | CTGCAG | 2 cut(s) | 433, 1497 |
| PstNI | CAGNNNCTG | 2 cut(s) | 413, 1747 |
| PsuI | RGATCY | 1 cut(s) | 577 |
| PvuII | CAGCTG | 3 cut(s) | 1111, 1514, 1613 |
| RsaI | GTAC | 4 cut(s) | 530, 667, 1324, 1499 |
| RsaNI | GTAC | 4 cut(s) | 529, 666, 1323, 1498 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1008 |
| SacI | GAGCTC | 2 cut(s) | 114, 1248 |
| SapI | GCTCTTC | 1 cut(s) | 119 |
| SaqAI | TTAA | 4 cut(s) | 1046, 1197, 1715, 1942 |
| SatI | GCNGC | 9 cut(s) | 160, 234, 282, 1112, 1505, 1602, 1611, 1614, 1933 |
| Sau3AI | GATC | 7 cut(s) | 577, 601, 631, 707, 817, 1486, 1909 |
| Sau96I | GGNCC | 3 cut(s) | 1478, 1565, 1566 |
| SchI | GAGTC | 3 cut(s) | 251, 1316, 1865 |
| ScrFI | CCNGG | 2 cut(s) | 582, 1451 |
| SduI | GDGCHC | 7 cut(s) | 114, 485, 971, 1248, 1569, 1630, 1694 |
| SfcI | CTRYAG | 3 cut(s) | 429, 452, 1493 |
| SfuI | TTCGAA | 1 cut(s) | 166 |
| SinI | GGWCC | 1 cut(s) | 1478 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1008 |
| SmlI | CTYRAG | 1 cut(s) | 1189 |
| SmoI | CTYRAG | 1 cut(s) | 1189 |
| Sse9I | AATT | 9 cut(s) | 93, 342, 359, 523, 540, 1065, 1271, 1318, 1737 |
| SsiI | CCGC | 8 cut(s) | 160, 176, 236, 281, 324, 1331, 1367, 1933 |
| SspI | AATATT | 1 cut(s) | 853 |
| SspMI | CTAG | 2 cut(s) | 470, 1928 |
| SstI | GAGCTC | 2 cut(s) | 114, 1248 |
| StyD4I | CCNGG | 2 cut(s) | 580, 1449 |
| StyI | CCWWGG | 3 cut(s) | 259, 1115, 1783 |
| TaaI | ACNGT | 7 cut(s) | 196, 774, 1081, 1300, 1549, 1581, 1847 |
| TaiI | ACGT | 2 cut(s) | 192, 735 |
| TaqI | TCGA | 4 cut(s) | 105, 166, 245, 1177 |
| TasI | AATT | 9 cut(s) | 93, 342, 359, 523, 540, 1065, 1271, 1318, 1737 |
| TatI | WGTACW | 2 cut(s) | 665, 1322 |
| TauI | GCSGC | 3 cut(s) | 162, 284, 1935 |
| TfiI | GAWTC | 5 cut(s) | 168, 675, 997, 1155, 1526 |
| Tru1I | TTAA | 4 cut(s) | 1046, 1197, 1715, 1942 |
| Tru9I | TTAA | 4 cut(s) | 1046, 1197, 1715, 1942 |
| TscAI | CASTG | 3 cut(s) | 222, 1536, 1783 |
| TseFI | GTSAC | 3 cut(s) | 190, 1300, 1778 |
| TseI | GCWGC | 6 cut(s) | 233, 1111, 1504, 1601, 1610, 1613 |
| Tsp45I | GTSAC | 3 cut(s) | 190, 1300, 1778 |
| TspDTI | ATGAA | 6 cut(s) | 45, 431, 1270, 1284, 1326, 1724 |
| TspGWI | ACGGA | 1 cut(s) | 899 |
| TspRI | CASTG | 3 cut(s) | 222, 1536, 1783 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 785 |
| VpaK11BI | GGWCC | 1 cut(s) | 1478 |
| XapI | RAATTY | 3 cut(s) | 93, 523, 1737 |
| XmnI | GAANNNNTTC | 1 cut(s) | 774 |
| XspI | CTAG | 2 cut(s) | 470, 1928 |