Prupe.6G335100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
29112455 .. 29117886
5432 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G335100.1

Sequence Viewer

Length: 2121 bp
ATGGATCGAATGAGGCCGGTGTATGTCAGGCAGAAGAGCGGTAACAGCACCCCCGGACCACCAACCTCGCCAATGAAGTCGCCATTGCACCACCATGGGAGGTCGGGGTCGGTTGGAATGGGGGGTGCCAAGAAAGCGCAGCACACGAAAGCTGCGGCTCAAAGACTTGCACATGTGATGGCCAATAAACCAACTGAGGACGACGATGAGGAGGAGGACGACCTTTCTTATGATCTTAGCAGCTTGTCAAGCAGCACAGGGAGCATCGGACTTGCCGGTGGAAGATCAATGCGCCCTCGCTCCCCAATGTCTGTTCGTACTGTTCAAGATCAACCTACATCTACACGCACAACACCAGGTGGCCGATCATCCCAATCTGTCAATCCTGTGGAACAGCCATCTTCAACTCATTCAACACCAGCTAGCCGATCATATCAGTCCTTAAACCAAGCAGAACAGCCATCATCTGCTCATTCAACGCCAGCAAGCCGACCCTTTCAATCCATCAACACTAAATCCATCAACTCTGCTGCCGAACAACCACATTCTCTTCGTTCTTCGATAGCTACTAGACCATTGCAGCCGTCTAGTTCCAACGAACAACCTACCTCTGCTCGTTCTATGTCAGCCATGAACTCTGTAGAACAACCACATTCTATTCGTTCTGGCATGGCTGCAACTCGATCATCTCAGCCTACCAACTCTGTCGAACAACCTACCTCTGCTCGGTCTATGTCAGCCATGAACTCTGTAGAACAACCATATTCTATCCGTTCTGGCATCGCTACTCGATCATATCAGCCTACCAACTCTGTGGAACAACCTACCTCTGCTCGTTCTTTAGCCACTGCTCGTCCACAATTAGGAACCAAGCCAGTCCACATGGTACCAGCTAGTGTACCTATATCACTTAGGCCACCCTCTTCTGCAGATGGTCCAGTTGATAATCGGAGAGAGCCAGTACCTATATCACTTAGGCCACCCTCTACTGCCATTCTATCAGAAGCTGCTGCAGTTGACAATCGGAGAGATAAAAGGTTGTCAATGGATTTAGGCAGTTTAAACATGAGAGAAACTAGGACTCAGCGTTCTTCTGCTTTACAAGATGAGCTTGATATGCTACAGGAAGAAAATGAGAGTTTACTTGAAAAGCTTCGACTTGCAGAAGAGAGGTATGAGGAAACAGAGGCAAGAGCTCGACAGCTCGAGCAACAGGTTGCTACTCTTGGAGAAGGTGTAACATTAGAAGCCCGTCTTCTAAGCAGAAAGGAGGCAGCACTGCAGCAAAGGGAGGCTGCTTTGAGATTGGCTGCACAAACTCATGGCGGCAGTGGTGGTGGTAGTGGTAGAAATGATGAAGCAGAGTATGAACTGAAATCGCTTCGGATTATGACTCAAAGAATGATACTTACTCGCGAAGAGATGGAAGAGGTGGTCTTGAAGAGATCCTGGCTTGCTCGGTACTGGAGTTTATGTGTTGAACATGGTATTCATGCTGAGATTGCCACATCAAGATATGAATTCTGGTCAGCTCTTGCTCCTCTTCCTGTTGAAGCTGTTTTAGCAGCTGGAGAGAAAGCTAAGGAGGAGATAGAACACAATGATCTAGATATAGATGAAAGAGAAGATAGTCCACGCAATTTGAATGAACTCTCGGGAGAGAGAAACATTGAGAGCATGCTTTTGGTGGAGAAAGGTCTGCGCGAAATAGCTTCATTGAAGGTAGAGGATGCAGTGGCGATGGCGATGGCTCAACATCGACGACCCAGTTCAATGAAAACTGGTCTATCAGAGTTGAAGCTACCAATTGATGGACAGTTTGAAGCATTTGAACTAAGCAAAGAGGAGTCTGAAGATGTGCTTTTCAAGCAGGCTTGGCTTGCATATTTCTGGAGAAGAGCCAAAAACCATGGGGTGGAAGCAGATATAGCAGATGAGCGTTTGCAATTCTGGATCAACCACAACTCCAAATCACCCACCACTTCACATGACGCAGTTGACGTTGAGCGTGGCCTTCTGGAGCTGAAGAAGTTGGGCATTGAAACCCAGTTGTGGAGAGAATCTCGCAAGTGGCTTGAGCATGATTCGATGCATAGAACCCGAAGTCTGTCTGATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

707

Amino Acids

78.12

Weight (kDa)

6.33

Isoelectric Point (pI)

67.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 886
AccB1I GGYRCC 2 cut(s) 125, 886
AccB7I CCANNNNNTGG 2 cut(s) 1811, 1915
AccBSI CCGCTC 1 cut(s) 39
AccII CGCG 2 cut(s) 1416, 1704
AciI CCGC 3 cut(s) 39, 155, 1326
AclWI GGATC 3 cut(s) 12, 1440, 1961
AcoI YGGCCR 2 cut(s) 180, 361
AcsI RAATTY 1 cut(s) 1520
AcuI CTGAAG 2 cut(s) 1872, 2045
AdeI CACNNNGTG 1 cut(s) 359
AfaI GTAC 5 cut(s) 319, 888, 900, 963, 1463
AfiI CCNNNNNNNGG 5 cut(s) 726, 863, 1811, 1915, 2052
AflIII ACRYGT 1 cut(s) 172
AjnI CCWGG 2 cut(s) 355, 1448
AloI GAACNNNNNNTCC 2 cut(s) 1072, 1104
Alw21I GWGCWC 1 cut(s) 1198
AlwI GGATC 3 cut(s) 12, 1440, 1961
AlwNI CAGNNNCTG 1 cut(s) 1007
Ama87I CYCGRG 2 cut(s) 1205, 1654
AoxI GGCC 6 cut(s) 14, 180, 361, 914, 977, 2011
ApoI RAATTY 1 cut(s) 1520
Asp700I GAANNNNTTC 1 cut(s) 1152
Asp718I GGTACC 1 cut(s) 886
AspLEI GCGC 3 cut(s) 139, 294, 1704
AspS9I GGNCC 2 cut(s) 56, 935
AsuC2I CCSGG 1 cut(s) 54
AsuHPI GGTGA 1 cut(s) 1965
AsuNHI GCTAGC 1 cut(s) 422
AvaI CYCGRG 2 cut(s) 1205, 1654
AvaII GGWCC 2 cut(s) 56, 935
BaeI ACNNNNGTAYC 2 cut(s) 1453, 1486
BalI TGGCCA 1 cut(s) 182
BanI GGYRCC 2 cut(s) 125, 886
BanII GRGCYC 1 cut(s) 1198
BbsI GAAGAC 1 cut(s) 1247
Bbv12I GWGCWC 1 cut(s) 1198
BceAI ACGGC 1 cut(s) 568
BciT130I CCWGG 2 cut(s) 357, 1450
BcnI CCSGG 1 cut(s) 54
BfaI CTAG 6 cut(s) 423, 570, 588, 894, 1077, 1607
BfmI CTRYAG 6 cut(s) 639, 750, 927, 1011, 1121, 1280
Bme1390I CCNGG 3 cut(s) 54, 357, 1450
Bme18I GGWCC 2 cut(s) 56, 935
BmeT110I CYCGRG 2 cut(s) 1205, 1654
BmgT120I GGNCC 2 cut(s) 56, 935
BmiI GGNNCC 3 cut(s) 127, 868, 888
BmrFI CCNGG 3 cut(s) 54, 357, 1450
BmrI ACTGGG 2 cut(s) 1761, 2041
BmsI GCATC 4 cut(s) 273, 789, 1720, 2079
BmtI GCTAGC 1 cut(s) 426
BmuI ACTGGG 2 cut(s) 1761, 2041
BpiI GAAGAC 1 cut(s) 1247
BplI GAGNNNNNCTC 2 cut(s) 2047, 2079
BpmI CTGGAG 4 cut(s) 1486, 1590, 1912, 2039
Bpu10I CCTNAGC 1 cut(s) 1581
BpuEI CTTGAG 1 cut(s) 2096
BpuMI CCSGG 1 cut(s) 54
BsaJI CCNNGG 3 cut(s) 52, 94, 1909
BsaXI ACNNNNNCTCC 6 cut(s) 1221, 1251, 1459, 1489, 1949, 1979
Bsc4I CCNNNNNNNGG 5 cut(s) 726, 863, 1811, 1915, 2052
Bse118I RCCGGY 2 cut(s) 16, 275
Bse1I ACTGG 7 cut(s) 875, 938, 959, 1469, 1767, 1786, 2047
Bse3DI GCAATG 2 cut(s) 83, 575
BseBI CCWGG 2 cut(s) 357, 1450
BseDI CCNNGG 3 cut(s) 52, 94, 1909
BseGI GGATG 2 cut(s) 368, 1735
BseLI CCNNNNNNNGG 5 cut(s) 726, 863, 1811, 1915, 2052
BseMI GCAATG 2 cut(s) 83, 575
BseMII CTCAG 4 cut(s) 186, 704, 1097, 1488
BseNI ACTGG 7 cut(s) 875, 938, 959, 1469, 1767, 1786, 2047
BseRI GAGGAG 5 cut(s) 224, 227, 1530, 1601, 1859
BsgI GTGCAG 1 cut(s) 1296
Bsh1236I CGCG 2 cut(s) 1416, 1704
BshFI GGCC 6 cut(s) 16, 182, 363, 916, 979, 2013
BshNI GGYRCC 2 cut(s) 125, 886
BsiHKAI GWGCWC 1 cut(s) 1198
BsiHKCI CYCGRG 2 cut(s) 1205, 1654
BsiSI CCGG 3 cut(s) 17, 54, 276
BslI CCNNNNNNNGG 5 cut(s) 726, 863, 1811, 1915, 2052
BsnI GGCC 6 cut(s) 16, 182, 363, 916, 979, 2013
BsoBI CYCGRG 2 cut(s) 1205, 1654
Bsp1286I GDGCHC 1 cut(s) 1198
Bsp19I CCATGG 2 cut(s) 94, 1909
Bsp68I TCGCGA 1 cut(s) 1416
BspACI CCGC 3 cut(s) 39, 155, 1326
BspANI GGCC 6 cut(s) 16, 182, 363, 916, 979, 2013
BspCNI CTCAG 4 cut(s) 187, 703, 1096, 1489
BspFNI CGCG 2 cut(s) 1416, 1704
BspLI GGNNCC 3 cut(s) 127, 868, 888
BspMAI CTGCAG 3 cut(s) 931, 1015, 1284
BspOI GCTAGC 1 cut(s) 426
BspPI GGATC 3 cut(s) 12, 1440, 1961
BspQI GCTCTTC 2 cut(s) 29, 1891
BspT107I GGYRCC 2 cut(s) 125, 886
BsrBI CCGCTC 1 cut(s) 39
BsrDI GCAATG 2 cut(s) 83, 575
BsrFI RCCGGY 2 cut(s) 16, 275
BsrI ACTGG 7 cut(s) 875, 938, 959, 1469, 1767, 1786, 2047
BssAI RCCGGY 2 cut(s) 16, 275
BssECI CCNNGG 3 cut(s) 52, 94, 1909
BssT1I CCWWGG 2 cut(s) 94, 1909
Bst2UI CCWGG 2 cut(s) 357, 1450
Bst4CI ACNGT 2 cut(s) 322, 1818
Bst6I CTCTTC 9 cut(s) 29, 555, 928, 1161, 1413, 1422, 1436, 1548, 1891
BstC8I GCNNGC 7 cut(s) 424, 483, 487, 1455, 1679, 1872, 1881
BstDSI CCRYGG 2 cut(s) 94, 1909
BstF5I GGATG 2 cut(s) 368, 1735
BstFNI CGCG 2 cut(s) 1416, 1704
BstHHI GCGC 3 cut(s) 139, 294, 1704
BstNI CCWGG 2 cut(s) 357, 1450
BstNSI RCATGY 2 cut(s) 176, 1681
BstSCI CCNGG 3 cut(s) 52, 355, 1448
BstSFI CTRYAG 6 cut(s) 639, 750, 927, 1011, 1121, 1280
BstUI CGCG 2 cut(s) 1416, 1704
BstV2I GAAGAC 1 cut(s) 1247
BstX2I RGATCY 1 cut(s) 1445
BstXI CCANNNNNNTGG 1 cut(s) 814
BstYI RGATCY 1 cut(s) 1445
BsuRI GGCC 6 cut(s) 16, 182, 363, 916, 979, 2013
BtgI CCRYGG 2 cut(s) 94, 1909
BtgZI GCGATG 3 cut(s) 766, 1754, 1760
BtsCI GGATG 2 cut(s) 368, 1735
BtsI GCAGTG 4 cut(s) 846, 1277, 1336, 1740
BtsIMutI CAGTG 4 cut(s) 846, 1277, 1336, 1740
BtuMI TCGCGA 1 cut(s) 1416
Cac8I GCNNGC 7 cut(s) 424, 483, 487, 1455, 1679, 1872, 1881
CaiI CAGNNNCTG 1 cut(s) 1007
CfoI GCGC 3 cut(s) 139, 294, 1704
Cfr10I RCCGGY 2 cut(s) 16, 275
Cfr13I GGNCC 2 cut(s) 56, 935
CseI GACGC 1 cut(s) 2000
CsiI ACCWGGT 1 cut(s) 355
Csp6I GTAC 5 cut(s) 318, 887, 899, 962, 1462
CspCI CAANNNNNGTGG 2 cut(s) 1623, 1658
CviQI GTAC 5 cut(s) 318, 887, 899, 962, 1462
DraI TTTAAA 1 cut(s) 1062
DraIII CACNNNGTG 1 cut(s) 359
EaeI YGGCCR 2 cut(s) 180, 361
Eam1104I CTCTTC 9 cut(s) 29, 555, 928, 1161, 1413, 1422, 1436, 1548, 1891
EarI CTCTTC 9 cut(s) 29, 555, 928, 1161, 1413, 1422, 1436, 1548, 1891
Ecl136II GAGCTC 1 cut(s) 1196
Eco130I CCWWGG 2 cut(s) 94, 1909
Eco24I GRGCYC 1 cut(s) 1198
Eco47I GGWCC 2 cut(s) 56, 935
Eco53kI GAGCTC 1 cut(s) 1196
Eco57I CTGAAG 2 cut(s) 1872, 2045
Eco88I CYCGRG 2 cut(s) 1205, 1654
EcoICRI GAGCTC 1 cut(s) 1196
EcoRI GAATTC 1 cut(s) 1520
EcoRII CCWGG 2 cut(s) 355, 1448
EcoT14I CCWWGG 2 cut(s) 94, 1909
EcoT22I ATGCAT 1 cut(s) 2094
EcoT38I GRGCYC 1 cut(s) 1198
ErhI CCWWGG 2 cut(s) 94, 1909
FalI AAGNNNNNCTT 6 cut(s) 1095, 1127, 1239, 1271, 1845, 1877
FokI GGATG 2 cut(s) 355, 1742
FriOI GRGCYC 1 cut(s) 1198
FspBI CTAG 6 cut(s) 423, 570, 588, 894, 1077, 1607
GlaI GCGC 3 cut(s) 138, 293, 1703
GsuI CTGGAG 4 cut(s) 1486, 1590, 1912, 2039
HaeIII GGCC 6 cut(s) 16, 182, 363, 916, 979, 2013
HapII CCGG 3 cut(s) 17, 54, 276
HgaI GACGC 1 cut(s) 2000
HhaI GCGC 3 cut(s) 139, 294, 1704
Hin6I GCGC 3 cut(s) 137, 292, 1702
HinP1I GCGC 3 cut(s) 137, 292, 1702
HincII GTYRAC 2 cut(s) 1018, 1999
HindII GTYRAC 2 cut(s) 1018, 1999
HindIII AAGCTT 1 cut(s) 1151
HinfI GANTC 5 cut(s) 1081, 1393, 1847, 2060, 2084
HpaII CCGG 3 cut(s) 17, 54, 276
HphI GGTGA 1 cut(s) 1965
Hpy166II GTNNAC 7 cut(s) 857, 880, 899, 1018, 1142, 1634, 1999
Hpy188I TCNGA 9 cut(s) 269, 951, 1003, 1026, 1386, 1792, 1852, 2113, 2120
Hpy188III TCNNGA 9 cut(s) 326, 1415, 1438, 1512, 1607, 1656, 1891, 1951, 2018
Hpy8I GTNNAC 7 cut(s) 857, 880, 899, 1018, 1142, 1634, 1999
Hpy99I CGWCG 2 cut(s) 206, 1764
HpyAV CCTTC 3 cut(s) 1226, 1714, 2024
HpyCH4III ACNGT 2 cut(s) 322, 1818
HpyCH4IV ACGT 1 cut(s) 2001
HpySE526I ACGT 1 cut(s) 2001
HspAI GCGC 3 cut(s) 137, 292, 1702
KpnI GGTACC 1 cut(s) 890
LguI GCTCTTC 2 cut(s) 29, 1891
LmnI GCTCC 4 cut(s) 261, 305, 1543, 2020
LweI GCATC 4 cut(s) 273, 789, 1720, 2079
MabI ACCWGGT 1 cut(s) 355
MaeI CTAG 6 cut(s) 423, 570, 588, 894, 1077, 1607
MaeII ACGT 1 cut(s) 2001
MaeIII GTNAC 2 cut(s) 41, 1237
MbiI CCGCTC 1 cut(s) 39
MfeI CAATTG 1 cut(s) 1806
MflI RGATCY 1 cut(s) 1445
MhlI GDGCHC 1 cut(s) 1198
MlsI TGGCCA 1 cut(s) 182
MluCI AATT 5 cut(s) 860, 1520, 1639, 1806, 1946
MluNI TGGCCA 1 cut(s) 182
MlyI GAGTC 3 cut(s) 1075, 1387, 1856
MmeI TCCRAC 2 cut(s) 94, 618
Mox20I TGGCCA 1 cut(s) 182
Mph1103I ATGCAT 1 cut(s) 2094
MroXI GAANNNNTTC 1 cut(s) 1152
MscI TGGCCA 1 cut(s) 182
MseI TTAA 2 cut(s) 443, 1061
MslI CAYNNNNRTG 1 cut(s) 93
Msp20I TGGCCA 1 cut(s) 182
MspA1I CMGCKG 1 cut(s) 1568
MspI CCGG 3 cut(s) 17, 54, 276
MspR9I CCNGG 3 cut(s) 54, 357, 1450
MssI GTTTAAAC 1 cut(s) 1062
MunI CAATTG 1 cut(s) 1806
MvaI CCWGG 2 cut(s) 357, 1450
MvnI CGCG 2 cut(s) 1416, 1704
NciI CCSGG 1 cut(s) 54
NcoI CCATGG 2 cut(s) 94, 1909
NheI GCTAGC 1 cut(s) 422
NlaIV GGNNCC 3 cut(s) 127, 868, 888
NruI TCGCGA 1 cut(s) 1416
NsiI ATGCAT 1 cut(s) 2094
NspI RCATGY 2 cut(s) 176, 1681
PaeI GCATGC 1 cut(s) 1681
PaeR7I CTCGAG 1 cut(s) 1205
PciI ACATGT 1 cut(s) 172
PciSI GCTCTTC 2 cut(s) 29, 1891
PcsI WCGNNNNNNNCGW 1 cut(s) 1998
PdmI GAANNNNTTC 1 cut(s) 1152
PfeI GAWTC 2 cut(s) 2060, 2084
PflMI CCANNNNNTGG 2 cut(s) 1811, 1915
PleI GAGTC 3 cut(s) 1075, 1387, 1855
PmeI GTTTAAAC 1 cut(s) 1062
PpsI GAGTC 3 cut(s) 1075, 1387, 1855
PscI ACATGT 1 cut(s) 172
Psp124BI GAGCTC 1 cut(s) 1198
Psp6I CCWGG 2 cut(s) 355, 1448
PspGI CCWGG 2 cut(s) 355, 1448
PspN4I GGNNCC 3 cut(s) 127, 868, 888
PspPI GGNCC 2 cut(s) 56, 935
PspXI VCTCGAGB 1 cut(s) 1205
PstI CTGCAG 3 cut(s) 931, 1015, 1284
PstNI CAGNNNCTG 1 cut(s) 1007
PsuI RGATCY 1 cut(s) 1445
PvuII CAGCTG 1 cut(s) 1568
RruI TCGCGA 1 cut(s) 1416
RsaI GTAC 5 cut(s) 319, 888, 900, 963, 1463
RsaNI GTAC 5 cut(s) 318, 887, 899, 962, 1462
RseI CAYNNNNRTG 1 cut(s) 93
SacI GAGCTC 1 cut(s) 1198
SapI GCTCTTC 2 cut(s) 29, 1891
SaqAI TTAA 2 cut(s) 443, 1061
Sau96I GGNCC 2 cut(s) 56, 935
SchI GAGTC 3 cut(s) 1075, 1387, 1856
ScrFI CCNGG 3 cut(s) 54, 357, 1450
SduI GDGCHC 1 cut(s) 1198
SexAI ACCWGGT 1 cut(s) 355
SfaNI GCATC 4 cut(s) 273, 789, 1720, 2079
SfcI CTRYAG 6 cut(s) 639, 750, 927, 1011, 1121, 1280
Sfr274I CTCGAG 1 cut(s) 1205
SinI GGWCC 2 cut(s) 56, 935
SlaI CTCGAG 1 cut(s) 1205
SmiMI CAYNNNNRTG 1 cut(s) 93
SmlI CTYRAG 2 cut(s) 1205, 2075
SmoI CTYRAG 2 cut(s) 1205, 2075
SphI GCATGC 1 cut(s) 1681
Sse9I AATT 5 cut(s) 860, 1520, 1639, 1806, 1946
SsiI CCGC 3 cut(s) 39, 155, 1326
SspMI CTAG 6 cut(s) 423, 570, 588, 894, 1077, 1607
SstI GAGCTC 1 cut(s) 1198
StyD4I CCNGG 3 cut(s) 52, 355, 1448
StyI CCWWGG 2 cut(s) 94, 1909
TaaI ACNGT 2 cut(s) 322, 1818
TaiI ACGT 1 cut(s) 2004
TaqII GACCGA 1 cut(s) 717
TasI AATT 5 cut(s) 860, 1520, 1639, 1806, 1946
TauI GCSGC 2 cut(s) 158, 1329
TfiI GAWTC 2 cut(s) 2060, 2084
Tru1I TTAA 2 cut(s) 443, 1061
Tru9I TTAA 2 cut(s) 443, 1061
TscAI CASTG 4 cut(s) 853, 1284, 1336, 1740
TspGWI ACGGA 1 cut(s) 761
TspRI CASTG 4 cut(s) 853, 1284, 1336, 1740
Van91I CCANNNNNTGG 2 cut(s) 1811, 1915
VpaK11BI GGWCC 2 cut(s) 56, 935
XapI RAATTY 1 cut(s) 1520
XbaI TCTAGA 1 cut(s) 1606
XceI RCATGY 2 cut(s) 176, 1681
XhoI CTCGAG 1 cut(s) 1205
XmnI GAANNNNTTC 1 cut(s) 1152
XspI CTAG 6 cut(s) 423, 570, 588, 894, 1077, 1607
Zsp2I ATGCAT 1 cut(s) 2094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.