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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g04230 |
| malus_domestica | MD00G1051700.v1.1 MD12G1231500.v1.1 |
| prunus_persica | Prupe.6G335100_v2.0.a1 |
| pyrus_communis | pycom04g19150 pycom12g21430 |
| rosa_chinensis | RchiOBHm_Chr3g0452891 |
| rosa_laevigata | RLG00000025562 |
| rosa_multiflora | Rmu_sc0002823.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00429900 |
| rosa_rugosa | Rorug02G0643400 Rorug02G0643500 Rorug02G0643500 Rorug02G0643500 Rorug02G0643500 |
| rosa_samantha | Rh3AG046200 Rh3BG048700 Rh3CG047300 Rh3DG048300 |
| rosa_wichuraiana | Rw3G003630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 886 |
| AccB1I | GGYRCC | 2 cut(s) | 125, 886 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1811, 1915 |
| AccBSI | CCGCTC | 1 cut(s) | 39 |
| AccII | CGCG | 2 cut(s) | 1416, 1704 |
| AciI | CCGC | 3 cut(s) | 39, 155, 1326 |
| AclWI | GGATC | 3 cut(s) | 12, 1440, 1961 |
| AcoI | YGGCCR | 2 cut(s) | 180, 361 |
| AcsI | RAATTY | 1 cut(s) | 1520 |
| AcuI | CTGAAG | 2 cut(s) | 1872, 2045 |
| AdeI | CACNNNGTG | 1 cut(s) | 359 |
| AfaI | GTAC | 5 cut(s) | 319, 888, 900, 963, 1463 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 726, 863, 1811, 1915, 2052 |
| AflIII | ACRYGT | 1 cut(s) | 172 |
| AjnI | CCWGG | 2 cut(s) | 355, 1448 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1072, 1104 |
| Alw21I | GWGCWC | 1 cut(s) | 1198 |
| AlwI | GGATC | 3 cut(s) | 12, 1440, 1961 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1007 |
| Ama87I | CYCGRG | 2 cut(s) | 1205, 1654 |
| AoxI | GGCC | 6 cut(s) | 14, 180, 361, 914, 977, 2011 |
| ApoI | RAATTY | 1 cut(s) | 1520 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1152 |
| Asp718I | GGTACC | 1 cut(s) | 886 |
| AspLEI | GCGC | 3 cut(s) | 139, 294, 1704 |
| AspS9I | GGNCC | 2 cut(s) | 56, 935 |
| AsuC2I | CCSGG | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 1965 |
| AsuNHI | GCTAGC | 1 cut(s) | 422 |
| AvaI | CYCGRG | 2 cut(s) | 1205, 1654 |
| AvaII | GGWCC | 2 cut(s) | 56, 935 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1453, 1486 |
| BalI | TGGCCA | 1 cut(s) | 182 |
| BanI | GGYRCC | 2 cut(s) | 125, 886 |
| BanII | GRGCYC | 1 cut(s) | 1198 |
| BbsI | GAAGAC | 1 cut(s) | 1247 |
| Bbv12I | GWGCWC | 1 cut(s) | 1198 |
| BceAI | ACGGC | 1 cut(s) | 568 |
| BciT130I | CCWGG | 2 cut(s) | 357, 1450 |
| BcnI | CCSGG | 1 cut(s) | 54 |
| BfaI | CTAG | 6 cut(s) | 423, 570, 588, 894, 1077, 1607 |
| BfmI | CTRYAG | 6 cut(s) | 639, 750, 927, 1011, 1121, 1280 |
| Bme1390I | CCNGG | 3 cut(s) | 54, 357, 1450 |
| Bme18I | GGWCC | 2 cut(s) | 56, 935 |
| BmeT110I | CYCGRG | 2 cut(s) | 1205, 1654 |
| BmgT120I | GGNCC | 2 cut(s) | 56, 935 |
| BmiI | GGNNCC | 3 cut(s) | 127, 868, 888 |
| BmrFI | CCNGG | 3 cut(s) | 54, 357, 1450 |
| BmrI | ACTGGG | 2 cut(s) | 1761, 2041 |
| BmsI | GCATC | 4 cut(s) | 273, 789, 1720, 2079 |
| BmtI | GCTAGC | 1 cut(s) | 426 |
| BmuI | ACTGGG | 2 cut(s) | 1761, 2041 |
| BpiI | GAAGAC | 1 cut(s) | 1247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2047, 2079 |
| BpmI | CTGGAG | 4 cut(s) | 1486, 1590, 1912, 2039 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1581 |
| BpuEI | CTTGAG | 1 cut(s) | 2096 |
| BpuMI | CCSGG | 1 cut(s) | 54 |
| BsaJI | CCNNGG | 3 cut(s) | 52, 94, 1909 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1221, 1251, 1459, 1489, 1949, 1979 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 726, 863, 1811, 1915, 2052 |
| Bse118I | RCCGGY | 2 cut(s) | 16, 275 |
| Bse1I | ACTGG | 7 cut(s) | 875, 938, 959, 1469, 1767, 1786, 2047 |
| Bse3DI | GCAATG | 2 cut(s) | 83, 575 |
| BseBI | CCWGG | 2 cut(s) | 357, 1450 |
| BseDI | CCNNGG | 3 cut(s) | 52, 94, 1909 |
| BseGI | GGATG | 2 cut(s) | 368, 1735 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 726, 863, 1811, 1915, 2052 |
| BseMI | GCAATG | 2 cut(s) | 83, 575 |
| BseMII | CTCAG | 4 cut(s) | 186, 704, 1097, 1488 |
| BseNI | ACTGG | 7 cut(s) | 875, 938, 959, 1469, 1767, 1786, 2047 |
| BseRI | GAGGAG | 5 cut(s) | 224, 227, 1530, 1601, 1859 |
| BsgI | GTGCAG | 1 cut(s) | 1296 |
| Bsh1236I | CGCG | 2 cut(s) | 1416, 1704 |
| BshFI | GGCC | 6 cut(s) | 16, 182, 363, 916, 979, 2013 |
| BshNI | GGYRCC | 2 cut(s) | 125, 886 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1198 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1205, 1654 |
| BsiSI | CCGG | 3 cut(s) | 17, 54, 276 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 726, 863, 1811, 1915, 2052 |
| BsnI | GGCC | 6 cut(s) | 16, 182, 363, 916, 979, 2013 |
| BsoBI | CYCGRG | 2 cut(s) | 1205, 1654 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1198 |
| Bsp19I | CCATGG | 2 cut(s) | 94, 1909 |
| Bsp68I | TCGCGA | 1 cut(s) | 1416 |
| BspACI | CCGC | 3 cut(s) | 39, 155, 1326 |
| BspANI | GGCC | 6 cut(s) | 16, 182, 363, 916, 979, 2013 |
| BspCNI | CTCAG | 4 cut(s) | 187, 703, 1096, 1489 |
| BspFNI | CGCG | 2 cut(s) | 1416, 1704 |
| BspLI | GGNNCC | 3 cut(s) | 127, 868, 888 |
| BspMAI | CTGCAG | 3 cut(s) | 931, 1015, 1284 |
| BspOI | GCTAGC | 1 cut(s) | 426 |
| BspPI | GGATC | 3 cut(s) | 12, 1440, 1961 |
| BspQI | GCTCTTC | 2 cut(s) | 29, 1891 |
| BspT107I | GGYRCC | 2 cut(s) | 125, 886 |
| BsrBI | CCGCTC | 1 cut(s) | 39 |
| BsrDI | GCAATG | 2 cut(s) | 83, 575 |
| BsrFI | RCCGGY | 2 cut(s) | 16, 275 |
| BsrI | ACTGG | 7 cut(s) | 875, 938, 959, 1469, 1767, 1786, 2047 |
| BssAI | RCCGGY | 2 cut(s) | 16, 275 |
| BssECI | CCNNGG | 3 cut(s) | 52, 94, 1909 |
| BssT1I | CCWWGG | 2 cut(s) | 94, 1909 |
| Bst2UI | CCWGG | 2 cut(s) | 357, 1450 |
| Bst4CI | ACNGT | 2 cut(s) | 322, 1818 |
| Bst6I | CTCTTC | 9 cut(s) | 29, 555, 928, 1161, 1413, 1422, 1436, 1548, 1891 |
| BstC8I | GCNNGC | 7 cut(s) | 424, 483, 487, 1455, 1679, 1872, 1881 |
| BstDSI | CCRYGG | 2 cut(s) | 94, 1909 |
| BstF5I | GGATG | 2 cut(s) | 368, 1735 |
| BstFNI | CGCG | 2 cut(s) | 1416, 1704 |
| BstHHI | GCGC | 3 cut(s) | 139, 294, 1704 |
| BstNI | CCWGG | 2 cut(s) | 357, 1450 |
| BstNSI | RCATGY | 2 cut(s) | 176, 1681 |
| BstSCI | CCNGG | 3 cut(s) | 52, 355, 1448 |
| BstSFI | CTRYAG | 6 cut(s) | 639, 750, 927, 1011, 1121, 1280 |
| BstUI | CGCG | 2 cut(s) | 1416, 1704 |
| BstV2I | GAAGAC | 1 cut(s) | 1247 |
| BstX2I | RGATCY | 1 cut(s) | 1445 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 814 |
| BstYI | RGATCY | 1 cut(s) | 1445 |
| BsuRI | GGCC | 6 cut(s) | 16, 182, 363, 916, 979, 2013 |
| BtgI | CCRYGG | 2 cut(s) | 94, 1909 |
| BtgZI | GCGATG | 3 cut(s) | 766, 1754, 1760 |
| BtsCI | GGATG | 2 cut(s) | 368, 1735 |
| BtsI | GCAGTG | 4 cut(s) | 846, 1277, 1336, 1740 |
| BtsIMutI | CAGTG | 4 cut(s) | 846, 1277, 1336, 1740 |
| BtuMI | TCGCGA | 1 cut(s) | 1416 |
| Cac8I | GCNNGC | 7 cut(s) | 424, 483, 487, 1455, 1679, 1872, 1881 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1007 |
| CfoI | GCGC | 3 cut(s) | 139, 294, 1704 |
| Cfr10I | RCCGGY | 2 cut(s) | 16, 275 |
| Cfr13I | GGNCC | 2 cut(s) | 56, 935 |
| CseI | GACGC | 1 cut(s) | 2000 |
| CsiI | ACCWGGT | 1 cut(s) | 355 |
| Csp6I | GTAC | 5 cut(s) | 318, 887, 899, 962, 1462 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1623, 1658 |
| CviQI | GTAC | 5 cut(s) | 318, 887, 899, 962, 1462 |
| DraI | TTTAAA | 1 cut(s) | 1062 |
| DraIII | CACNNNGTG | 1 cut(s) | 359 |
| EaeI | YGGCCR | 2 cut(s) | 180, 361 |
| Eam1104I | CTCTTC | 9 cut(s) | 29, 555, 928, 1161, 1413, 1422, 1436, 1548, 1891 |
| EarI | CTCTTC | 9 cut(s) | 29, 555, 928, 1161, 1413, 1422, 1436, 1548, 1891 |
| Ecl136II | GAGCTC | 1 cut(s) | 1196 |
| Eco130I | CCWWGG | 2 cut(s) | 94, 1909 |
| Eco24I | GRGCYC | 1 cut(s) | 1198 |
| Eco47I | GGWCC | 2 cut(s) | 56, 935 |
| Eco53kI | GAGCTC | 1 cut(s) | 1196 |
| Eco57I | CTGAAG | 2 cut(s) | 1872, 2045 |
| Eco88I | CYCGRG | 2 cut(s) | 1205, 1654 |
| EcoICRI | GAGCTC | 1 cut(s) | 1196 |
| EcoRI | GAATTC | 1 cut(s) | 1520 |
| EcoRII | CCWGG | 2 cut(s) | 355, 1448 |
| EcoT14I | CCWWGG | 2 cut(s) | 94, 1909 |
| EcoT22I | ATGCAT | 1 cut(s) | 2094 |
| EcoT38I | GRGCYC | 1 cut(s) | 1198 |
| ErhI | CCWWGG | 2 cut(s) | 94, 1909 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1095, 1127, 1239, 1271, 1845, 1877 |
| FokI | GGATG | 2 cut(s) | 355, 1742 |
| FriOI | GRGCYC | 1 cut(s) | 1198 |
| FspBI | CTAG | 6 cut(s) | 423, 570, 588, 894, 1077, 1607 |
| GlaI | GCGC | 3 cut(s) | 138, 293, 1703 |
| GsuI | CTGGAG | 4 cut(s) | 1486, 1590, 1912, 2039 |
| HaeIII | GGCC | 6 cut(s) | 16, 182, 363, 916, 979, 2013 |
| HapII | CCGG | 3 cut(s) | 17, 54, 276 |
| HgaI | GACGC | 1 cut(s) | 2000 |
| HhaI | GCGC | 3 cut(s) | 139, 294, 1704 |
| Hin6I | GCGC | 3 cut(s) | 137, 292, 1702 |
| HinP1I | GCGC | 3 cut(s) | 137, 292, 1702 |
| HincII | GTYRAC | 2 cut(s) | 1018, 1999 |
| HindII | GTYRAC | 2 cut(s) | 1018, 1999 |
| HindIII | AAGCTT | 1 cut(s) | 1151 |
| HinfI | GANTC | 5 cut(s) | 1081, 1393, 1847, 2060, 2084 |
| HpaII | CCGG | 3 cut(s) | 17, 54, 276 |
| HphI | GGTGA | 1 cut(s) | 1965 |
| Hpy166II | GTNNAC | 7 cut(s) | 857, 880, 899, 1018, 1142, 1634, 1999 |
| Hpy188I | TCNGA | 9 cut(s) | 269, 951, 1003, 1026, 1386, 1792, 1852, 2113, 2120 |
| Hpy188III | TCNNGA | 9 cut(s) | 326, 1415, 1438, 1512, 1607, 1656, 1891, 1951, 2018 |
| Hpy8I | GTNNAC | 7 cut(s) | 857, 880, 899, 1018, 1142, 1634, 1999 |
| Hpy99I | CGWCG | 2 cut(s) | 206, 1764 |
| HpyAV | CCTTC | 3 cut(s) | 1226, 1714, 2024 |
| HpyCH4III | ACNGT | 2 cut(s) | 322, 1818 |
| HpyCH4IV | ACGT | 1 cut(s) | 2001 |
| HpySE526I | ACGT | 1 cut(s) | 2001 |
| HspAI | GCGC | 3 cut(s) | 137, 292, 1702 |
| KpnI | GGTACC | 1 cut(s) | 890 |
| LguI | GCTCTTC | 2 cut(s) | 29, 1891 |
| LmnI | GCTCC | 4 cut(s) | 261, 305, 1543, 2020 |
| LweI | GCATC | 4 cut(s) | 273, 789, 1720, 2079 |
| MabI | ACCWGGT | 1 cut(s) | 355 |
| MaeI | CTAG | 6 cut(s) | 423, 570, 588, 894, 1077, 1607 |
| MaeII | ACGT | 1 cut(s) | 2001 |
| MaeIII | GTNAC | 2 cut(s) | 41, 1237 |
| MbiI | CCGCTC | 1 cut(s) | 39 |
| MfeI | CAATTG | 1 cut(s) | 1806 |
| MflI | RGATCY | 1 cut(s) | 1445 |
| MhlI | GDGCHC | 1 cut(s) | 1198 |
| MlsI | TGGCCA | 1 cut(s) | 182 |
| MluCI | AATT | 5 cut(s) | 860, 1520, 1639, 1806, 1946 |
| MluNI | TGGCCA | 1 cut(s) | 182 |
| MlyI | GAGTC | 3 cut(s) | 1075, 1387, 1856 |
| MmeI | TCCRAC | 2 cut(s) | 94, 618 |
| Mox20I | TGGCCA | 1 cut(s) | 182 |
| Mph1103I | ATGCAT | 1 cut(s) | 2094 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1152 |
| MscI | TGGCCA | 1 cut(s) | 182 |
| MseI | TTAA | 2 cut(s) | 443, 1061 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| Msp20I | TGGCCA | 1 cut(s) | 182 |
| MspA1I | CMGCKG | 1 cut(s) | 1568 |
| MspI | CCGG | 3 cut(s) | 17, 54, 276 |
| MspR9I | CCNGG | 3 cut(s) | 54, 357, 1450 |
| MssI | GTTTAAAC | 1 cut(s) | 1062 |
| MunI | CAATTG | 1 cut(s) | 1806 |
| MvaI | CCWGG | 2 cut(s) | 357, 1450 |
| MvnI | CGCG | 2 cut(s) | 1416, 1704 |
| NciI | CCSGG | 1 cut(s) | 54 |
| NcoI | CCATGG | 2 cut(s) | 94, 1909 |
| NheI | GCTAGC | 1 cut(s) | 422 |
| NlaIV | GGNNCC | 3 cut(s) | 127, 868, 888 |
| NruI | TCGCGA | 1 cut(s) | 1416 |
| NsiI | ATGCAT | 1 cut(s) | 2094 |
| NspI | RCATGY | 2 cut(s) | 176, 1681 |
| PaeI | GCATGC | 1 cut(s) | 1681 |
| PaeR7I | CTCGAG | 1 cut(s) | 1205 |
| PciI | ACATGT | 1 cut(s) | 172 |
| PciSI | GCTCTTC | 2 cut(s) | 29, 1891 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1998 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1152 |
| PfeI | GAWTC | 2 cut(s) | 2060, 2084 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1811, 1915 |
| PleI | GAGTC | 3 cut(s) | 1075, 1387, 1855 |
| PmeI | GTTTAAAC | 1 cut(s) | 1062 |
| PpsI | GAGTC | 3 cut(s) | 1075, 1387, 1855 |
| PscI | ACATGT | 1 cut(s) | 172 |
| Psp124BI | GAGCTC | 1 cut(s) | 1198 |
| Psp6I | CCWGG | 2 cut(s) | 355, 1448 |
| PspGI | CCWGG | 2 cut(s) | 355, 1448 |
| PspN4I | GGNNCC | 3 cut(s) | 127, 868, 888 |
| PspPI | GGNCC | 2 cut(s) | 56, 935 |
| PspXI | VCTCGAGB | 1 cut(s) | 1205 |
| PstI | CTGCAG | 3 cut(s) | 931, 1015, 1284 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1007 |
| PsuI | RGATCY | 1 cut(s) | 1445 |
| PvuII | CAGCTG | 1 cut(s) | 1568 |
| RruI | TCGCGA | 1 cut(s) | 1416 |
| RsaI | GTAC | 5 cut(s) | 319, 888, 900, 963, 1463 |
| RsaNI | GTAC | 5 cut(s) | 318, 887, 899, 962, 1462 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SacI | GAGCTC | 1 cut(s) | 1198 |
| SapI | GCTCTTC | 2 cut(s) | 29, 1891 |
| SaqAI | TTAA | 2 cut(s) | 443, 1061 |
| Sau96I | GGNCC | 2 cut(s) | 56, 935 |
| SchI | GAGTC | 3 cut(s) | 1075, 1387, 1856 |
| ScrFI | CCNGG | 3 cut(s) | 54, 357, 1450 |
| SduI | GDGCHC | 1 cut(s) | 1198 |
| SexAI | ACCWGGT | 1 cut(s) | 355 |
| SfaNI | GCATC | 4 cut(s) | 273, 789, 1720, 2079 |
| SfcI | CTRYAG | 6 cut(s) | 639, 750, 927, 1011, 1121, 1280 |
| Sfr274I | CTCGAG | 1 cut(s) | 1205 |
| SinI | GGWCC | 2 cut(s) | 56, 935 |
| SlaI | CTCGAG | 1 cut(s) | 1205 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| SmlI | CTYRAG | 2 cut(s) | 1205, 2075 |
| SmoI | CTYRAG | 2 cut(s) | 1205, 2075 |
| SphI | GCATGC | 1 cut(s) | 1681 |
| Sse9I | AATT | 5 cut(s) | 860, 1520, 1639, 1806, 1946 |
| SsiI | CCGC | 3 cut(s) | 39, 155, 1326 |
| SspMI | CTAG | 6 cut(s) | 423, 570, 588, 894, 1077, 1607 |
| SstI | GAGCTC | 1 cut(s) | 1198 |
| StyD4I | CCNGG | 3 cut(s) | 52, 355, 1448 |
| StyI | CCWWGG | 2 cut(s) | 94, 1909 |
| TaaI | ACNGT | 2 cut(s) | 322, 1818 |
| TaiI | ACGT | 1 cut(s) | 2004 |
| TaqII | GACCGA | 1 cut(s) | 717 |
| TasI | AATT | 5 cut(s) | 860, 1520, 1639, 1806, 1946 |
| TauI | GCSGC | 2 cut(s) | 158, 1329 |
| TfiI | GAWTC | 2 cut(s) | 2060, 2084 |
| Tru1I | TTAA | 2 cut(s) | 443, 1061 |
| Tru9I | TTAA | 2 cut(s) | 443, 1061 |
| TscAI | CASTG | 4 cut(s) | 853, 1284, 1336, 1740 |
| TspGWI | ACGGA | 1 cut(s) | 761 |
| TspRI | CASTG | 4 cut(s) | 853, 1284, 1336, 1740 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1811, 1915 |
| VpaK11BI | GGWCC | 2 cut(s) | 56, 935 |
| XapI | RAATTY | 1 cut(s) | 1520 |
| XbaI | TCTAGA | 1 cut(s) | 1606 |
| XceI | RCATGY | 2 cut(s) | 176, 1681 |
| XhoI | CTCGAG | 1 cut(s) | 1205 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1152 |
| XspI | CTAG | 6 cut(s) | 423, 570, 588, 894, 1077, 1607 |
| Zsp2I | ATGCAT | 1 cut(s) | 2094 |