Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0011571

Physical Location & Seq

Genomic Coordinates Forward (+)

3223563 .. 3230326

Gene Structure 6764 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG048700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGATCGAATGAGGCCGGTGTATGTTAGGCAGAAGAGCAATTCCAGTGGCACGCCGGGACCGCCAGGTTCGCCGTCGATGGCCTCTCCAATAATGCACCACCATTCAAGGTCGGGGTCCCTTGGATTGAGCGGTGGCAAGAAAGCACAGAACACCAAAGCCGCGGCTCAACGGCTTGCACATGTCATGGCACACAAACCCACCGACGACGACGATGAGGATGAAGACGACCTCTCTATTGATATCGGCTTGTCAAGCGGCACCGGGAGCATCGGACTTGCCGGTGTTGGAAGACCAATTCGGCCTCGCTCGCCGGGGATAAATTCAGTTGGTACTGTTCAAGAGCCACCTTCATCCGCAAGGCCAATAGCACCAGGTGGTCGATCAGCTCTATCTGTCAAGACTGCCCGCTCTGTGGAACCACAACCATCATCAACTCATTCAACGCCAGCTATGCGACCATTTCAGTCCATCAACTCTGTGGAACCACCACCTTCAGCTCATTCAACACCAGCAAGCCGGCCATCTCAGTCCATAAACAATAGACCAATCAACACTCTTGAACAATCACCGTATTCCTTTCGTTCTTCAATGAATAATAAATCATCTCAGTCATCCAGCAATGTTGAACAACCTGGTTCTGCTCGTTCTATGTCAGGCATTAGCTCTACTGAACAACCCCAGTCTCTTCGTCCTTCATTAGCTACACGATCGTCTCAGAGTACTAGTACCAATGAGCAACCAAACTCTGCTCGTTCTATGGCAGCAGCAGCAGCACGTCCACAGTTAGGGACCAAGCCAGTCCACATGGTACCGGCTAGTGTACCTATATCACTTAGGCCGTCCCCTTCTGCAGATACTCCCTCTGAGAGTAGGAGAGATCCGCCAGGACCTATATTATTAAGGCCACCCTCTTCTGCGATGCTATATTCTGACGGTTCAGGTGAAAGTCGGAGAGAGAGAAGGTTGTCTATGGATTTAGGAAATCTGAACCTAAGAGACAGTGGATCTCAGAATTCTTCTGCTTTACAAGATGAGCTTGATATGCTACAGGAAGAAAATGAAAGTTTACTTGAAAAGCTTCGACTTGCAGAAGAGAAGTGTGAGGAAACAGAGGCAAGAGCTCGGCAGCTTGAGAAACAGGTTGCTTCTCTTGGAGAAGGTGTAACGTTGGAAGCACGTCTTCTAAGCAGAAAGGAGGCAGCACTGCAGCAAAGGGAGGCTGCTTTGAGAGTGGCTGCCCAAACTCATGATGATAGAAATGATGAAGCTGAGTCCGAACTGCAAACAATTCGGATTATGACTCAGAGAATGATACTGACTCGTGAAGAGAAGGAAGACGTTGTTTTGAAGAGATCCTGGCTTGCTCGGTACTGGAGTTTATGTGTTGAACATGGTATACATGCTGAGATTGCTACAGCACGATCTGAATTCTGGTCAACTCTTGCTCCTGCACCTGTTGAAGCTGTACTAGAAGCTGGAAAGAAAGCGAGAGAGCAGACAGCTGAGGAGAACAACGATCTATATGAAAGAGAGCATAGTCCAAGGGATTTGAACGAACTCTCGGGAGAGGGAAATATTGAGAACATGCTTTTAGTGGAGCAAGGTCTGCGTGAACTAGCATTATTGAAGGTAGAGGATGCAGTGGCACTTGCAATGGCTCAACATCGACACCGCAATTCAAAATCTGGTTCAGAGGTAAAGCAATCAGCTGATGGACAGTCCGAGGGTTATGAATTGAGCAAAGAGGAGTCTGATGATGTGTTCTTCAAGCAGGCTTGGCTAACATACTTCTGGAGAAGAGCGAAAAATTATGGTCTGGAAGCAGATATAGTAGATGATCGTTTGCAATTCTGGATGAACTGCAACGCCAAGTCACCCACCTCACATGATGCAGTTGATGTTGAACGTGGTCTCAGTGAGCTTAGGAAGTTGGGAATCGAAATCCAACTATGGAAAAAATCGCGCAAAGGGCTTGAGCTTGATTCGATCCCTATAACACGGCAGTCTGACTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

672

Amino Acids

73.66

Weight (kDa)

6.02

Isoelectric Point (pI)

69.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011571)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g04230
malus_domestica	MD00G1051700.v1.1 MD12G1231500.v1.1
prunus_persica	Prupe.6G335100_v2.0.a1
pyrus_communis	pycom04g19150 pycom12g21430
rosa_chinensis	RchiOBHm_Chr3g0452891
rosa_laevigata	RLG00000025562
rosa_multiflora	Rmu_sc0002823.1_g000008
rosa_roxburghii	Rroxscaffold_6G00429900
rosa_rugosa	Rorug02G0643400 Rorug02G0643500 Rorug02G0643500 Rorug02G0643500 Rorug02G0643500
rosa_samantha	Rh3AG046200 Rh3BG048700 Rh3CG047300 Rh3DG048300
rosa_wichuraiana	Rw3G003630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	811
AccB1I	GGYRCC	2 cut(s)	260, 811
AccBSI	CCGCTC	2 cut(s)	132, 411
AccI	GTMKAC	1 cut(s)	1399
AccII	CGCG	2 cut(s)	164, 1966
AciI	CCGC	9 cut(s)	62, 132, 162, 164, 258, 357, 409, 884, 1675
AclI	AACGTT	1 cut(s)	1169
AclWI	GGATC	5 cut(s)	12, 875, 1015, 1350, 1984
AcoI	YGGCCR	1 cut(s)	521
AcsI	RAATTY	3 cut(s)	322, 1015, 1430
AcuI	CTGAAG	1 cut(s)	480
AdeI	CACNNNGTG	1 cut(s)	377
AfaI	GTAC	7 cut(s)	334, 724, 730, 813, 825, 1373, 1470
AfiI	CCNNNNNNNGG	2 cut(s)	415, 788
AflIII	ACRYGT	1 cut(s)	181
AhlI	ACTAGT	1 cut(s)	725
AjiI	CACGTC	2 cut(s)	779, 1181
AjnI	CCWGG	5 cut(s)	64, 373, 634, 886, 1358
Alw21I	GWGCWC	1 cut(s)	1126
Alw26I	GTCTC	4 cut(s)	690, 720, 993, 1919
AlwI	GGATC	5 cut(s)	12, 875, 1015, 1350, 1984
Ama87I	CYCGRG	1 cut(s)	1564
AoxI	GGCC	7 cut(s)	14, 81, 302, 362, 521, 839, 905
ApeKI	GCWGC	9 cut(s)	764, 767, 770, 773, 1129, 1202, 1210, 1223, 1238
ApoI	RAATTY	3 cut(s)	322, 1015, 1430
Asp700I	GAANNNNTTC	1 cut(s)	1080
Asp718I	GGTACC	1 cut(s)	811
AspLEI	GCGC	1 cut(s)	1968
AspS9I	GGNCC	4 cut(s)	59, 117, 792, 890
AsuC2I	CCSGG	3 cut(s)	57, 265, 315
AsuHPI	GGTGA	3 cut(s)	561, 956, 1869
AvaI	CYCGRG	1 cut(s)	1564
AvaII	GGWCC	4 cut(s)	59, 117, 792, 890
BaeI	ACNNNNGTAYC	2 cut(s)	1363, 1396
BanI	GGYRCC	2 cut(s)	260, 811
BanII	GRGCYC	1 cut(s)	1126
BauI	CACGAG	1 cut(s)	1323
BbsI	GAAGAC	4 cut(s)	231, 298, 1175, 1344
Bbv12I	GWGCWC	1 cut(s)	1126
BbvCI	CCTCAGC	1 cut(s)	1506
BbvI	GCAGC	9 cut(s)	776, 779, 782, 785, 1141, 1210, 1214, 1222, 1225
BccI	CCATC	5 cut(s)	73, 436, 479, 532, 1709
BceAI	ACGGC	3 cut(s)	58, 188, 826
BcgI	CGANNNNNNTGC	2 cut(s)	1274, 1308
BciT130I	CCWGG	5 cut(s)	66, 375, 636, 888, 1360
BcnI	CCSGG	3 cut(s)	57, 265, 315
BcoDI	GTCTC	4 cut(s)	690, 720, 993, 1919
BcuI	ACTAGT	1 cut(s)	725
BfaI	CTAG	4 cut(s)	726, 819, 1472, 1619
BfmI	CTRYAG	4 cut(s)	852, 1049, 1208, 1416
BmcAI	AGTACT	1 cut(s)	724
Bme1390I	CCNGG	8 cut(s)	57, 66, 265, 315, 375, 636, 888, 1360
Bme18I	GGWCC	4 cut(s)	59, 117, 792, 890
BmeT110I	CYCGRG	1 cut(s)	1564
BmgBI	CACGTC	2 cut(s)	779, 1181
BmgT120I	GGNCC	4 cut(s)	59, 117, 792, 890
BmiI	GGNNCC	8 cut(s)	60, 118, 119, 262, 420, 486, 793, 813
BmrFI	CCNGG	8 cut(s)	57, 66, 265, 315, 375, 636, 888, 1360
BmrI	ACTGGG	1 cut(s)	676
BmsI	GCATC	4 cut(s)	279, 912, 1630, 1882
BmuI	ACTGGG	1 cut(s)	676
BpiI	GAAGAC	4 cut(s)	231, 298, 1175, 1344
BpmI	CTGGAG	2 cut(s)	1396, 1816
Bpu10I	CCTNAGC	2 cut(s)	1506, 1925
BpuEI	CTTGAG	2 cut(s)	1154, 1997
BpuMI	CCSGG	3 cut(s)	57, 265, 315
BsaI	GGTCTC	1 cut(s)	1919
BsaJI	CCNNGG	5 cut(s)	121, 162, 314, 1544, 1725
BsaXI	ACNNNNNCTCC	6 cut(s)	1149, 1179, 1369, 1399, 1432, 1462
Bsc4I	CCNNNNNNNGG	2 cut(s)	415, 788
Bse118I	RCCGGY	4 cut(s)	16, 281, 519, 814
Bse1I	ACTGG	4 cut(s)	45, 682, 800, 1379
Bse3DI	GCAATG	2 cut(s)	628, 1662
BseBI	CCWGG	5 cut(s)	66, 375, 636, 888, 1360
BseDI	CCNNGG	5 cut(s)	121, 162, 314, 1544, 1725
BseGI	GGATG	5 cut(s)	226, 353, 614, 1645, 1863
BseLI	CCNNNNNNNGG	2 cut(s)	415, 788
BseMI	GCAATG	2 cut(s)	628, 1662
BseNI	ACTGG	4 cut(s)	45, 682, 800, 1379
BseRI	GAGGAG	2 cut(s)	1523, 1763
BseXI	GCAGC	9 cut(s)	776, 779, 782, 785, 1141, 1210, 1214, 1222, 1225
BsgI	GTGCAG	1 cut(s)	1437
Bsh1236I	CGCG	2 cut(s)	164, 1966
Bsh1285I	CGRYCG	1 cut(s)	713
BshFI	GGCC	7 cut(s)	16, 83, 304, 364, 523, 841, 907
BshNI	GGYRCC	2 cut(s)	260, 811
BsiEI	CGRYCG	1 cut(s)	713
BsiHKAI	GWGCWC	1 cut(s)	1126
BsiHKCI	CYCGRG	1 cut(s)	1564
BsiSI	CCGG	7 cut(s)	17, 56, 264, 282, 314, 520, 815
BslFI	GGGAC	4 cut(s)	72, 103, 805, 829
BslI	CCNNNNNNNGG	2 cut(s)	415, 788
BsmAI	GTCTC	4 cut(s)	690, 720, 993, 1919
BsmBI	CGTCTC	1 cut(s)	720
BsmFI	GGGAC	4 cut(s)	72, 103, 805, 829
BsnI	GGCC	7 cut(s)	16, 83, 304, 364, 523, 841, 907
Bso31I	GGTCTC	1 cut(s)	1919
BsoBI	CYCGRG	1 cut(s)	1564
Bsp1286I	GDGCHC	1 cut(s)	1126
BspACI	CCGC	9 cut(s)	62, 132, 162, 164, 258, 357, 409, 884, 1675
BspANI	GGCC	7 cut(s)	16, 83, 304, 364, 523, 841, 907
BspFNI	CGCG	2 cut(s)	164, 1966
BspHI	TCATGA	1 cut(s)	1249
BspLI	GGNNCC	8 cut(s)	60, 118, 119, 262, 420, 486, 793, 813
BspMAI	CTGCAG	2 cut(s)	856, 1212
BspPI	GGATC	5 cut(s)	12, 875, 1015, 1350, 1984
BspQI	GCTCTTC	2 cut(s)	29, 1795
BspT107I	GGYRCC	2 cut(s)	260, 811
BspTNI	GGTCTC	1 cut(s)	1919
BsrBI	CCGCTC	2 cut(s)	132, 411
BsrDI	GCAATG	2 cut(s)	628, 1662
BsrFI	RCCGGY	4 cut(s)	16, 281, 519, 814
BsrI	ACTGG	4 cut(s)	45, 682, 800, 1379
BssAI	RCCGGY	4 cut(s)	16, 281, 519, 814
BssECI	CCNNGG	5 cut(s)	121, 162, 314, 1544, 1725
BssNAI	GTATAC	1 cut(s)	1400
BssSI	CACGAG	1 cut(s)	1323
BssT1I	CCWWGG	2 cut(s)	121, 1544
Bst1107I	GTATAC	1 cut(s)	1400
Bst2BI	CACGAG	1 cut(s)	1323
Bst2UI	CCWGG	5 cut(s)	66, 375, 636, 888, 1360
Bst4CI	ACNGT	6 cut(s)	337, 573, 786, 938, 1004, 1722
Bst6I	CTCTTC	7 cut(s)	29, 693, 919, 1089, 1323, 1346, 1795
BstAPI	GCANNNNNTGC	1 cut(s)	1609
BstC8I	GCNNGC	9 cut(s)	53, 177, 311, 409, 450, 517, 521, 1365, 1776
BstDSI	CCRYGG	1 cut(s)	162
BstF5I	GGATG	5 cut(s)	226, 353, 614, 1645, 1863
BstFNI	CGCG	2 cut(s)	164, 1966
BstHHI	GCGC	1 cut(s)	1968
BstMAI	GTCTC	4 cut(s)	690, 720, 993, 1919
BstMCI	CGRYCG	1 cut(s)	713
BstNI	CCWGG	5 cut(s)	66, 375, 636, 888, 1360
BstNSI	RCATGY	3 cut(s)	185, 1406, 1591
BstSCI	CCNGG	8 cut(s)	55, 64, 263, 313, 373, 634, 886, 1358
BstSFI	CTRYAG	4 cut(s)	852, 1049, 1208, 1416
BstUI	CGCG	2 cut(s)	164, 1966
BstV1I	GCAGC	9 cut(s)	776, 779, 782, 785, 1141, 1210, 1214, 1222, 1225
BstV2I	GAAGAC	4 cut(s)	231, 298, 1175, 1344
BstX2I	RGATCY	3 cut(s)	880, 1007, 1355
BstYI	RGATCY	3 cut(s)	880, 1007, 1355
BstZ17I	GTATAC	1 cut(s)	1400
BsuRI	GGCC	7 cut(s)	16, 83, 304, 364, 523, 841, 907
BtgI	CCRYGG	1 cut(s)	162
BtgZI	GCGATG	1 cut(s)	935
BtrI	CACGTC	2 cut(s)	779, 1181
BtsCI	GGATG	5 cut(s)	226, 353, 614, 1645, 1863
BtsI	GCAGTG	2 cut(s)	1205, 1650
BtsIMutI	CAGTG	5 cut(s)	52, 1009, 1205, 1650, 1924
Cac8I	GCNNGC	9 cut(s)	53, 177, 311, 409, 450, 517, 521, 1365, 1776
CciI	TCATGA	1 cut(s)	1249
CfoI	GCGC	1 cut(s)	1968
Cfr10I	RCCGGY	4 cut(s)	16, 281, 519, 814
Cfr13I	GGNCC	4 cut(s)	59, 117, 792, 890
Cfr42I	CCGCGG	1 cut(s)	165
CsiI	ACCWGGT	2 cut(s)	373, 634
Csp6I	GTAC	7 cut(s)	333, 723, 729, 812, 824, 1372, 1469
CspCI	CAANNNNNGTGG	2 cut(s)	28, 63
CviAII	CATG	8 cut(s)	182, 187, 808, 1250, 1394, 1403, 1588, 1889
CviQI	GTAC	7 cut(s)	333, 723, 729, 812, 824, 1372, 1469
DraIII	CACNNNGTG	1 cut(s)	377
EaeI	YGGCCR	1 cut(s)	521
Eam1104I	CTCTTC	7 cut(s)	29, 693, 919, 1089, 1323, 1346, 1795
EarI	CTCTTC	7 cut(s)	29, 693, 919, 1089, 1323, 1346, 1795
EciI	GGCGGA	1 cut(s)	873
Ecl136II	GAGCTC	1 cut(s)	1124
Eco130I	CCWWGG	2 cut(s)	121, 1544
Eco24I	GRGCYC	1 cut(s)	1126
Eco31I	GGTCTC	1 cut(s)	1919
Eco32I	GATATC	1 cut(s)	244
Eco47I	GGWCC	4 cut(s)	59, 117, 792, 890
Eco53kI	GAGCTC	1 cut(s)	1124
Eco57I	CTGAAG	1 cut(s)	480
Eco88I	CYCGRG	1 cut(s)	1564
EcoICRI	GAGCTC	1 cut(s)	1124
EcoO109I	RGGNCCY	2 cut(s)	117, 890
EcoRI	GAATTC	2 cut(s)	1015, 1430
EcoRII	CCWGG	5 cut(s)	64, 373, 634, 886, 1358
EcoRV	GATATC	1 cut(s)	244
EcoT14I	CCWWGG	2 cut(s)	121, 1544
EcoT38I	GRGCYC	1 cut(s)	1126
ErhI	CCWWGG	2 cut(s)	121, 1544
Esp3I	CGTCTC	1 cut(s)	720
FaeI	CATG	8 cut(s)	185, 190, 811, 1253, 1397, 1406, 1591, 1892
FalI	AAGNNNNNCTT	4 cut(s)	1023, 1055, 1167, 1199
FaqI	GGGAC	4 cut(s)	72, 103, 805, 829
FatI	CATG	8 cut(s)	181, 186, 807, 1249, 1393, 1402, 1587, 1888
FauI	CCCGC	1 cut(s)	416
FblI	GTMKAC	1 cut(s)	1399
FokI	GGATG	5 cut(s)	233, 340, 601, 1652, 1870
FriOI	GRGCYC	1 cut(s)	1126
FspBI	CTAG	4 cut(s)	726, 819, 1472, 1619
GlaI	GCGC	1 cut(s)	1967
GsuI	CTGGAG	2 cut(s)	1396, 1816
HaeIII	GGCC	7 cut(s)	16, 83, 304, 364, 523, 841, 907
HapII	CCGG	7 cut(s)	17, 56, 264, 282, 314, 520, 815
HhaI	GCGC	1 cut(s)	1968
Hin1II	CATG	8 cut(s)	185, 190, 811, 1253, 1397, 1406, 1591, 1892
Hin6I	GCGC	1 cut(s)	1966
HinP1I	GCGC	1 cut(s)	1966
HincII	GTYRAC	1 cut(s)	1440
HindII	GTYRAC	1 cut(s)	1440
HindIII	AAGCTT	1 cut(s)	1079
HinfI	GANTC	6 cut(s)	1274, 1303, 1321, 1751, 1938, 1985
HpaII	CCGG	7 cut(s)	17, 56, 264, 282, 314, 520, 815
HphI	GGTGA	3 cut(s)	561, 956, 1869
Hpy166II	GTNNAC	7 cut(s)	782, 805, 824, 1070, 1400, 1440, 1616
Hpy188III	TCNNGA	9 cut(s)	341, 400, 560, 1250, 1325, 1566, 1795, 1820, 1855
Hpy8I	GTNNAC	7 cut(s)	782, 805, 824, 1070, 1400, 1440, 1616
Hpy99I	CGWCG	4 cut(s)	79, 209, 212, 215
HpyAV	CCTTC	8 cut(s)	360, 504, 705, 858, 957, 1154, 1327, 1624
HpyCH4III	ACNGT	6 cut(s)	337, 573, 786, 938, 1004, 1722
HpyCH4IV	ACGT	5 cut(s)	778, 1169, 1180, 1341, 1909
HpySE526I	ACGT	5 cut(s)	778, 1169, 1180, 1341, 1909
Hsp92II	CATG	8 cut(s)	185, 190, 811, 1253, 1397, 1406, 1591, 1892
HspAI	GCGC	1 cut(s)	1966
KflI	GGGWCCC	1 cut(s)	117
KpnI	GGTACC	1 cut(s)	815
KroI	GCCGGC	1 cut(s)	519
KroNI	GCCGGC	1 cut(s)	521
KspI	CCGCGG	1 cut(s)	165
LguI	GCTCTTC	2 cut(s)	29, 1795
LmnI	GCTCC	3 cut(s)	267, 1453, 1600
Lsp1109I	GCAGC	9 cut(s)	776, 779, 782, 785, 1141, 1210, 1214, 1222, 1225
LweI	GCATC	4 cut(s)	279, 912, 1630, 1882
MabI	ACCWGGT	2 cut(s)	373, 634
MaeI	CTAG	4 cut(s)	726, 819, 1472, 1619
MaeII	ACGT	5 cut(s)	778, 1169, 1180, 1341, 1909
MaeIII	GTNAC	2 cut(s)	1165, 1875
MbiI	CCGCTC	2 cut(s)	132, 411
MflI	RGATCY	3 cut(s)	880, 1007, 1355
MhlI	GDGCHC	1 cut(s)	1126
MlyI	GAGTC	4 cut(s)	1283, 1297, 1315, 1760
MmeI	TCCRAC	4 cut(s)	268, 932, 1152, 1972
MroNI	GCCGGC	1 cut(s)	519
MroXI	GAANNNNTTC	1 cut(s)	1080
MseI	TTAA	1 cut(s)	902
MspA1I	CMGCKG	3 cut(s)	164, 1505, 1712
MspI	CCGG	7 cut(s)	17, 56, 264, 282, 314, 520, 815
MspR9I	CCNGG	8 cut(s)	57, 66, 265, 315, 375, 636, 888, 1360
MvaI	CCWGG	5 cut(s)	66, 375, 636, 888, 1360
MvnI	CGCG	2 cut(s)	164, 1966
NaeI	GCCGGC	1 cut(s)	521
NciI	CCSGG	3 cut(s)	57, 265, 315
NgoMIV	GCCGGC	1 cut(s)	519
NlaIII	CATG	8 cut(s)	185, 190, 811, 1253, 1397, 1406, 1591, 1892
NlaIV	GGNNCC	8 cut(s)	60, 118, 119, 262, 420, 486, 793, 813
NmeAIII	GCCGAG	1 cut(s)	1105
NmuCI	GTSAC	1 cut(s)	1875
NspI	RCATGY	3 cut(s)	185, 1406, 1591
PagI	TCATGA	1 cut(s)	1249
PciI	ACATGT	1 cut(s)	181
PciSI	GCTCTTC	2 cut(s)	29, 1795
PdiI	GCCGGC	1 cut(s)	521
PdmI	GAANNNNTTC	1 cut(s)	1080
PfeI	GAWTC	2 cut(s)	1938, 1985
Ple19I	CGATCG	1 cut(s)	713
PleI	GAGTC	4 cut(s)	1282, 1297, 1315, 1759
PpsI	GAGTC	4 cut(s)	1282, 1297, 1315, 1759
PpuMI	RGGWCCY	2 cut(s)	117, 890
PscI	ACATGT	1 cut(s)	181
Psp124BI	GAGCTC	1 cut(s)	1126
Psp1406I	AACGTT	1 cut(s)	1169
Psp5II	RGGWCCY	2 cut(s)	117, 890
Psp6I	CCWGG	5 cut(s)	64, 373, 634, 886, 1358
PspGI	CCWGG	5 cut(s)	64, 373, 634, 886, 1358
PspN4I	GGNNCC	8 cut(s)	60, 118, 119, 262, 420, 486, 793, 813
PspPI	GGNCC	4 cut(s)	59, 117, 792, 890
PspPPI	RGGWCCY	2 cut(s)	117, 890
PsrI	GAACNNNNNNTAC	2 cut(s)	1383, 1415
PstI	CTGCAG	2 cut(s)	856, 1212
PsuI	RGATCY	3 cut(s)	880, 1007, 1355
PvuI	CGATCG	1 cut(s)	713
PvuII	CAGCTG	2 cut(s)	1505, 1712
RsaI	GTAC	7 cut(s)	334, 724, 730, 813, 825, 1373, 1470
RsaNI	GTAC	7 cut(s)	333, 723, 729, 812, 824, 1372, 1469
SacI	GAGCTC	1 cut(s)	1126
SacII	CCGCGG	1 cut(s)	165
SapI	GCTCTTC	2 cut(s)	29, 1795
SaqAI	TTAA	1 cut(s)	902
Sau96I	GGNCC	4 cut(s)	59, 117, 792, 890
ScaI	AGTACT	1 cut(s)	724
SchI	GAGTC	4 cut(s)	1283, 1297, 1315, 1760
ScrFI	CCNGG	8 cut(s)	57, 66, 265, 315, 375, 636, 888, 1360
SduI	GDGCHC	1 cut(s)	1126
SexAI	ACCWGGT	2 cut(s)	373, 634
SfaNI	GCATC	4 cut(s)	279, 912, 1630, 1882
SfcI	CTRYAG	4 cut(s)	852, 1049, 1208, 1416
Sfr303I	CCGCGG	1 cut(s)	165
SgrBI	CCGCGG	1 cut(s)	165
SinI	GGWCC	4 cut(s)	59, 117, 792, 890
SmlI	CTYRAG	2 cut(s)	1133, 1976
SmoI	CTYRAG	2 cut(s)	1133, 1976
SpeI	ACTAGT	1 cut(s)	725
SsiI	CCGC	9 cut(s)	62, 132, 162, 164, 258, 357, 409, 884, 1675
SspI	AATATT	1 cut(s)	1579
SspMI	CTAG	4 cut(s)	726, 819, 1472, 1619
SstI	GAGCTC	1 cut(s)	1126
StyD4I	CCNGG	8 cut(s)	55, 64, 263, 313, 373, 634, 886, 1358
StyI	CCWWGG	2 cut(s)	121, 1544
TaaI	ACNGT	6 cut(s)	337, 573, 786, 938, 1004, 1722
TaiI	ACGT	5 cut(s)	781, 1172, 1183, 1344, 1912
TaqI	TCGA	7 cut(s)	7, 77, 382, 1084, 1669, 1941, 1988
TatI	WGTACW	2 cut(s)	722, 1468
TauI	GCSGC	3 cut(s)	164, 167, 261
TfiI	GAWTC	2 cut(s)	1938, 1985
Tru1I	TTAA	1 cut(s)	902
Tru9I	TTAA	1 cut(s)	902
TscAI	CASTG	5 cut(s)	52, 1009, 1212, 1650, 1924
TseFI	GTSAC	1 cut(s)	1875
TseI	GCWGC	9 cut(s)	764, 767, 770, 773, 1129, 1202, 1210, 1223, 1238
Tsp45I	GTSAC	1 cut(s)	1875
TspDTI	ATGAA	9 cut(s)	237, 342, 608, 687, 1077, 1281, 1542, 1749, 1874
TspRI	CASTG	5 cut(s)	52, 1009, 1212, 1650, 1924
VpaK11BI	GGWCC	4 cut(s)	59, 117, 792, 890
XapI	RAATTY	3 cut(s)	322, 1015, 1430
XceI	RCATGY	3 cut(s)	185, 1406, 1591
XcmI	CCANNNNNNNNNTGG	1 cut(s)	478
XmiI	GTMKAC	1 cut(s)	1399
XmnI	GAANNNNTTC	1 cut(s)	1080
XspI	CTAG	4 cut(s)	726, 819, 1472, 1619
ZrmI	AGTACT	1 cut(s)	724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.