Prupe.6G344500_v2.0.a1

Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
29608762 .. 29610733
1972 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G344500.1

Sequence Viewer

Length: 381 bp
ATGCAACAGGGTGGAGGATCTGAAACGGAGGTGACATGGGAAGACCAGCAGAACATCAACAAATTTGGCAGATTGAATAACCGGTTTCACGAGCTCCAGGACGAGATCAAATTTGCCAAGGAATCAAATGAGAATCTGGAGGATGCAAGCAATGAGTTGATTCTCACTGATGAGGAGGTGGTCCGGTTCCAGATAGGTGAAGTGTTTGCCCATGTGCCAAAAGAAGAAGTGGAGAGCAGGATCGAAGAGATGAAAGAGGTGACGAGCAAAAATTTAGAGAAACTTGAGGAAGAGAAGGAATCTATTCTTGCACAGATGGCCGAATTGAAGCAAATTTTGTATGGAAAGTTCAAGGACTCCATCAATCTAGAGGAGGATTAA
Functional Annotation

Protein Analysis

127

Amino Acids

14.71

Weight (kDa)

4.46

Isoelectric Point (pI)

60.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015230)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08780
fragaria_vesca FvH4_6g02700
malus_domestica MD04G1225700.v1.1 MD12G1242900.v1.1
prunus_persica Prupe.6G344500_v2.0.a1
pyrus_communis pycom12g22190
rosa_chinensis RchiOBHm_Chr3g0450701
rosa_laevigata RLG00000025709
rosa_multiflora Rmu_sc0000078.1_g000033
rosa_roxburghii Rroxscaffold_6G00428360
rosa_rugosa Rorug02G0629800
rosa_samantha Rh3AG030600 Rh3BG031100 Rh3CG029900 Rh3DG030700
rosa_wichuraiana Rw3G002360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 25, 248
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 4 cut(s) 62, 110, 271, 333
AgeI ACCGGT 1 cut(s) 81
AgsI TTSAA 3 cut(s) 76, 328, 352
AjnI CCWGG 1 cut(s) 96
AluBI AGCT 1 cut(s) 94
AluI AGCT 1 cut(s) 94
Alw21I GWGCWC 1 cut(s) 96
AlwI GGATC 2 cut(s) 25, 248
AoxI GGCC 1 cut(s) 318
ApoI RAATTY 4 cut(s) 62, 110, 271, 333
AsiGI ACCGGT 1 cut(s) 81
Asp700I GAANNNNTTC 1 cut(s) 303
AspS9I GGNCC 1 cut(s) 181
AsuHPI GGTGA 3 cut(s) 43, 209, 271
AvaII GGWCC 1 cut(s) 181
BanII GRGCYC 1 cut(s) 96
BauI CACGAG 1 cut(s) 89
BbsI GAAGAC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 96
BccI CCATC 2 cut(s) 310, 368
BciT130I CCWGG 1 cut(s) 98
BfaI CTAG 1 cut(s) 368
Bme1390I CCNGG 1 cut(s) 98
Bme18I GGWCC 1 cut(s) 181
BmgT120I GGNCC 1 cut(s) 181
BmiI GGNNCC 1 cut(s) 188
BmrFI CCNGG 1 cut(s) 98
BmsI GCATC 1 cut(s) 133
BpiI GAAGAC 1 cut(s) 48
BpmI CTGGAG 2 cut(s) 80, 158
BpuEI CTTGAG 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 117
BsaWI WCCGGW 2 cut(s) 81, 183
Bse118I RCCGGY 1 cut(s) 81
Bse3DI GCAATG 1 cut(s) 157
BseBI CCWGG 1 cut(s) 98
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 148
BseMI GCAATG 1 cut(s) 157
BseRI GAGGAG 1 cut(s) 188
BshFI GGCC 1 cut(s) 320
BshTI ACCGGT 1 cut(s) 81
BsiHKAI GWGCWC 1 cut(s) 96
BsiSI CCGG 2 cut(s) 82, 184
BsnI GGCC 1 cut(s) 320
Bsp1286I GDGCHC 1 cut(s) 96
Bsp143I GATC 3 cut(s) 17, 105, 240
BspANI GGCC 1 cut(s) 320
BspLI GGNNCC 1 cut(s) 188
BspPI GGATC 2 cut(s) 25, 248
BsrDI GCAATG 1 cut(s) 157
BsrFI RCCGGY 1 cut(s) 81
BssAI RCCGGY 1 cut(s) 81
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 3 cut(s) 17, 105, 240
BssSI CACGAG 1 cut(s) 89
BssT1I CCWWGG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 89
Bst2UI CCWGG 1 cut(s) 98
Bst6I CTCTTC 2 cut(s) 240, 285
BstC8I GCNNGC 1 cut(s) 148
BstF5I GGATG 1 cut(s) 148
BstKTI GATC 3 cut(s) 20, 108, 243
BstMBI GATC 3 cut(s) 17, 105, 240
BstMWI GCNNNNNNNGC 1 cut(s) 317
BstNI CCWGG 1 cut(s) 98
BstSCI CCNGG 1 cut(s) 96
BstV2I GAAGAC 1 cut(s) 48
BstX2I RGATCY 1 cut(s) 17
BstYI RGATCY 1 cut(s) 17
BsuRI GGCC 1 cut(s) 320
BtsCI GGATG 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 1 cut(s) 148
Cfr10I RCCGGY 1 cut(s) 81
Cfr13I GGNCC 1 cut(s) 181
CspAI ACCGGT 1 cut(s) 81
CviAII CATG 2 cut(s) 36, 212
CviJI RGCY 2 cut(s) 94, 320
CviKI_1 RGCY 2 cut(s) 94, 320
DpnI GATC 3 cut(s) 19, 107, 242
DpnII GATC 3 cut(s) 17, 105, 240
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 2 cut(s) 240, 285
EarI CTCTTC 2 cut(s) 240, 285
Ecl136II GAGCTC 1 cut(s) 94
Eco130I CCWWGG 1 cut(s) 117
Eco24I GRGCYC 1 cut(s) 96
Eco47I GGWCC 1 cut(s) 181
Eco53kI GAGCTC 1 cut(s) 94
EcoICRI GAGCTC 1 cut(s) 94
EcoRII CCWGG 1 cut(s) 96
EcoT14I CCWWGG 1 cut(s) 117
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 2 cut(s) 39, 215
FaiI YATR 3 cut(s) 37, 213, 342
FatI CATG 2 cut(s) 35, 211
FokI GGATG 1 cut(s) 155
FriOI GRGCYC 1 cut(s) 96
FspBI CTAG 1 cut(s) 368
GsuI CTGGAG 2 cut(s) 80, 158
HaeIII GGCC 1 cut(s) 320
HapII CCGG 2 cut(s) 82, 184
Hin1II CATG 2 cut(s) 39, 215
HinfI GANTC 5 cut(s) 122, 133, 160, 299, 356
HpaII CCGG 2 cut(s) 82, 184
HphI GGTGA 3 cut(s) 43, 209, 271
Hpy188I TCNGA 1 cut(s) 22
Hpy188III TCNNGA 4 cut(s) 89, 137, 190, 368
HpyAV CCTTC 1 cut(s) 289
HpyCH4V TGCA 3 cut(s) 4, 146, 311
HpyF10VI GCNNNNNNNGC 1 cut(s) 317
Hsp92II CATG 2 cut(s) 39, 215
Kzo9I GATC 3 cut(s) 17, 105, 240
LmnI GCTCC 1 cut(s) 99
LpnPI CCDG 8 cut(s) 59, 83, 95, 110, 122, 197, 203, 223
LweI GCATC 1 cut(s) 133
MaeI CTAG 1 cut(s) 368
MaeIII GTNAC 2 cut(s) 31, 259
MalI GATC 3 cut(s) 19, 107, 242
MboI GATC 3 cut(s) 17, 105, 240
MboII GAAGA 4 cut(s) 53, 236, 257, 302
MflI RGATCY 1 cut(s) 17
MhlI GDGCHC 1 cut(s) 96
MluCI AATT 5 cut(s) 62, 110, 271, 323, 333
MlyI GAGTC 1 cut(s) 350
MnlI CCTC 9 cut(s) 8, 22, 133, 166, 169, 250, 280, 364, 367
MroXI GAANNNNTTC 1 cut(s) 303
MseI TTAA 1 cut(s) 379
MspI CCGG 2 cut(s) 82, 184
MspR9I CCNGG 1 cut(s) 98
MvaI CCWGG 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 317
NdeII GATC 3 cut(s) 17, 105, 240
NlaIII CATG 2 cut(s) 39, 215
NlaIV GGNNCC 1 cut(s) 188
NmuCI GTSAC 2 cut(s) 31, 259
PdmI GAANNNNTTC 1 cut(s) 303
PfeI GAWTC 4 cut(s) 122, 133, 160, 299
PfoI TCCNGGA 1 cut(s) 96
PinAI ACCGGT 1 cut(s) 81
PleI GAGTC 1 cut(s) 350
PpsI GAGTC 1 cut(s) 350
Psp124BI GAGCTC 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 96
PspGI CCWGG 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 188
PspPI GGNCC 1 cut(s) 181
PsrI GAACNNNNNNTAC 2 cut(s) 332, 364
PsuI RGATCY 1 cut(s) 17
SacI GAGCTC 1 cut(s) 96
SaqAI TTAA 1 cut(s) 379
Sau3AI GATC 3 cut(s) 17, 105, 240
Sau96I GGNCC 1 cut(s) 181
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 1 cut(s) 98
SduI GDGCHC 1 cut(s) 96
SetI ASST 5 cut(s) 33, 96, 180, 199, 261
SfaNI GCATC 1 cut(s) 133
SinI GGWCC 1 cut(s) 181
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 5 cut(s) 62, 110, 271, 323, 333
SspMI CTAG 1 cut(s) 368
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 1 cut(s) 96
StyI CCWWGG 1 cut(s) 117
TaqI TCGA 1 cut(s) 243
TasI AATT 5 cut(s) 62, 110, 271, 323, 333
TfiI GAWTC 4 cut(s) 122, 133, 160, 299
Tru1I TTAA 1 cut(s) 379
Tru9I TTAA 1 cut(s) 379
TscAI CASTG 1 cut(s) 172
TseFI GTSAC 2 cut(s) 31, 259
Tsp45I GTSAC 2 cut(s) 31, 259
TspDTI ATGAA 1 cut(s) 266
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 1 cut(s) 172
VpaK11BI GGWCC 1 cut(s) 181
XapI RAATTY 4 cut(s) 62, 110, 271, 333
XbaI TCTAGA 1 cut(s) 367
XmnI GAANNNNTTC 1 cut(s) 303
XspI CTAG 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.