Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015436

Physical Location & Seq

Genomic Coordinates Forward (+)

131058 .. 132603

Gene Structure 1546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G000700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGAACGACCTGATGACAAAATCCTTCACCAACTATGTGGATCTAAAGAAAGAGGCTATGAAAGATTTGGACCTTGAAGCTGGGCATAATAATGTGGAGATGTCATCTTCCACGACCCATATGCACACCGACCTTGGTCTGTTCTTGGAAGAGGCCGAGAAGGTGAAGCAGGAGATGGGTTCTGTCCGGGACATTCTGGGCCGTCTACAGCAAGCCAACGAAGAGAGCAAGTCCCTCCACAAGTCTGAGGCTTTGCAGTCCTTGCGCAGCAGAATTAATGCGGACATTATGACGGTGCTGAAGAAAACCAGGACTATCAGATCTCAGCTGGAGGACATGGACCGCGCCAACGCCGCCAACAGGAGGCTCTCCGCCTACAAAGAAGGCACCCCGATTTACAGGACCAGAATTGCCGTCACCAACGGACTGCGAAAGAAGCTCAAGGAGCTTATGATGGATTTCCAGGGCCTGAGGCAGAGGATGATGACCGAGTACAAGGAGACTGTGGGGAGACGCTACTTCACGGTGACTGGAGAGCACCCGGATGAGGAGGTTATCGAAAAGATCATCTCGAATGGGGATGGAAACGGCGGCGAGGAGTTTCTTGGGAAGGCCATACAAGAGCATGGGAGGGGAAAGGTGCTGGAAACTGTGGTGGAGATACAGGACAGGCACGACGCGGCGAAGGAGATTGAGAAGAGCCTGCTGGAGCTGCATCAGATATTCTTAGACATGGCTGTGATGGTGGAGGCTCAGGGAGAGCAGATGGATGATATTGAACACCATGTCATGAACGCTTCCCACTATGTGAAGGATGGAACCAAACATCTGAGGACTGCCAAGGGATACCAGAGGAGCAGCAGGAAGTGGATGTGTATTGGAGTCATAATCCTGCTCCTGCTCATTCTTGTCATTGTCATCCCCATTGCCACTAGCTTCGCTAATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0006810 GO:0006887 GO:0006906 GO:0006996 GO:0008150 GO:0009504 GO:0009506 GO:0009524 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0030054 GO:0031201 GO:0031224 GO:0032940 GO:0032991 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046903 GO:0048278 GO:0048284 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0055044 GO:0061024 GO:0061025 GO:0071840 GO:0071944 GO:0090174 GO:0098796 GO:0140056

KEGG Pathways

Metabolic & Signaling

ko04130 ko04721 map04130 map04721

Pfam Domains

Protein Families

SNARE Syntaxin

Protein Analysis

317

Amino Acids

36.0

Weight (kDa)

6.48

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08560
fragaria_vesca	FvH4_7g04270
malus_domestica	MD12G1000200.v1.1
prunus_persica	Prupe.7G000700_v2.0.a1
pyrus_communis	pycom12g00030
rosa_chinensis	RchiOBHm_Chr1g0329221
rosa_laevigata	RLG00000029909
rosa_multiflora	Rmu_sc0000203.1_g000003 Rmu_sc0010272.1_g000006
rosa_roxburghii	Rroxscaffold_4G00321310
rosa_rugosa	Rorug01G0077200
rosa_samantha	Rh1AG096200 Rh1BG077000 Rh1CG093000 Rh1DG099500
rosa_wichuraiana	Rw1G007450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	266
AccB1I	GGYRCC	1 cut(s)	386
AccI	GTMKAC	1 cut(s)	205
AccII	CGCG	2 cut(s)	345, 680
AciI	CCGC	6 cut(s)	281, 343, 354, 372, 591, 680
AclWI	GGATC	1 cut(s)	48
AcuI	CTGAAG	1 cut(s)	320
AdeI	CACNNNGTG	1 cut(s)	808
AfaI	GTAC	1 cut(s)	494
AfiI	CCNNNNNNNGG	3 cut(s)	360, 363, 547
AgsI	TTSAA	2 cut(s)	77, 779
AjnI	CCWGG	2 cut(s)	308, 462
AluBI	AGCT	6 cut(s)	80, 328, 439, 448, 712, 936
AluI	AGCT	6 cut(s)	80, 328, 439, 448, 712, 936
Alw21I	GWGCWC	1 cut(s)	540
Alw26I	GTCTC	2 cut(s)	494, 505
AlwI	GGATC	1 cut(s)	48
AlwNI	CAGNNNCTG	1 cut(s)	469
AoxI	GGCC	4 cut(s)	153, 199, 466, 612
ApeKI	GCWGC	3 cut(s)	267, 712, 858
AseI	ATTAAT	1 cut(s)	276
AspLEI	GCGC	2 cut(s)	267, 347
AspS9I	GGNCC	5 cut(s)	70, 199, 340, 402, 466
AsuC2I	CCSGG	2 cut(s)	188, 542
AsuHPI	GGTGA	4 cut(s)	19, 175, 409, 538
AvaII	GGWCC	3 cut(s)	70, 340, 402
AxyI	CCTNAGG	1 cut(s)	470
BanI	GGYRCC	1 cut(s)	386
Bbv12I	GWGCWC	1 cut(s)	540
BbvI	GCAGC	3 cut(s)	279, 699, 870
BccI	CCATC	6 cut(s)	169, 448, 575, 736, 760, 809
BceAI	ACGGC	3 cut(s)	186, 398, 604
BcgI	CGANNNNNNTGC	2 cut(s)	103, 137
BciT130I	CCWGG	2 cut(s)	310, 464
BciVI	GTATCC	1 cut(s)	839
BcnI	CCSGG	2 cut(s)	188, 542
BcoDI	GTCTC	2 cut(s)	494, 505
BfaI	CTAG	1 cut(s)	933
BfmI	CTRYAG	1 cut(s)	206
BfuI	GTATCC	1 cut(s)	839
BglII	AGATCT	1 cut(s)	320
BisI	GCNGC	6 cut(s)	268, 354, 592, 681, 713, 859
BlsI	GCNGC	6 cut(s)	269, 355, 593, 682, 714, 860
Bme1390I	CCNGG	4 cut(s)	188, 310, 464, 542
Bme18I	GGWCC	3 cut(s)	70, 340, 402
BmgT120I	GGNCC	5 cut(s)	70, 199, 340, 402, 466
BmiI	GGNNCC	2 cut(s)	388, 820
BmrFI	CCNGG	4 cut(s)	188, 310, 464, 542
BmsI	GCATC	1 cut(s)	724
BoxI	GACNNNNGTC	1 cut(s)	135
BpmI	CTGGAG	3 cut(s)	350, 552, 728
Bpu10I	CCTNAGC	1 cut(s)	753
BpuEI	CTTGAG	1 cut(s)	425
BpuMI	CCSGG	2 cut(s)	188, 542
BsaJI	CCNNGG	3 cut(s)	133, 463, 840
Bsc4I	CCNNNNNNNGG	3 cut(s)	360, 363, 547
Bse1I	ACTGG	1 cut(s)	535
Bse21I	CCTNAGG	1 cut(s)	470
Bse3DI	GCAATG	1 cut(s)	924
BseBI	CCWGG	2 cut(s)	310, 464
BseDI	CCNNGG	3 cut(s)	133, 463, 840
BseGI	GGATG	7 cut(s)	486, 550, 586, 775, 820, 876, 918
BseLI	CCNNNNNNNGG	3 cut(s)	360, 363, 547
BseMI	GCAATG	1 cut(s)	924
BseMII	CTCAG	5 cut(s)	237, 338, 461, 767, 821
BseNI	ACTGG	1 cut(s)	535
BseRI	GAGGAG	3 cut(s)	563, 611, 868
BseXI	GCAGC	3 cut(s)	279, 699, 870
BseYI	CCCAGC	1 cut(s)	80
Bsh1236I	CGCG	2 cut(s)	345, 680
BshFI	GGCC	4 cut(s)	155, 201, 468, 614
BshNI	GGYRCC	1 cut(s)	386
BsiHKAI	GWGCWC	1 cut(s)	540
BsiSI	CCGG	2 cut(s)	187, 542
BslFI	GGGAC	2 cut(s)	203, 217
BslI	CCNNNNNNNGG	3 cut(s)	360, 363, 547
BsmAI	GTCTC	2 cut(s)	494, 505
BsmBI	CGTCTC	1 cut(s)	505
BsmFI	GGGAC	2 cut(s)	203, 217
BsnI	GGCC	4 cut(s)	155, 201, 468, 614
Bsp1286I	GDGCHC	1 cut(s)	540
Bsp143I	GATC	3 cut(s)	40, 320, 564
BspACI	CCGC	6 cut(s)	281, 343, 354, 372, 591, 680
BspANI	GGCC	4 cut(s)	155, 201, 468, 614
BspCNI	CTCAG	5 cut(s)	238, 337, 462, 766, 822
BspFNI	CGCG	2 cut(s)	345, 680
BspHI	TCATGA	1 cut(s)	789
BspLI	GGNNCC	2 cut(s)	388, 820
BspPI	GGATC	1 cut(s)	48
BspQI	GCTCTTC	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	386
BsrDI	GCAATG	1 cut(s)	924
BsrI	ACTGG	1 cut(s)	535
BssECI	CCNNGG	3 cut(s)	133, 463, 840
BssMI	GATC	3 cut(s)	40, 320, 564
BssT1I	CCWWGG	2 cut(s)	133, 840
Bst2UI	CCWGG	2 cut(s)	310, 464
Bst4CI	ACNGT	4 cut(s)	295, 505, 526, 652
Bst6I	CTCTTC	3 cut(s)	144, 216, 692
BstAPI	GCANNNNNTGC	1 cut(s)	262
BstC8I	GCNNGC	2 cut(s)	213, 704
BstDEI	CTNAG	6 cut(s)	246, 324, 470, 727, 753, 830
BstF5I	GGATG	7 cut(s)	486, 550, 586, 775, 820, 876, 918
BstFNI	CGCG	2 cut(s)	345, 680
BstHHI	GCGC	2 cut(s)	267, 347
BstKTI	GATC	3 cut(s)	43, 323, 567
BstMAI	GTCTC	2 cut(s)	494, 505
BstMBI	GATC	3 cut(s)	40, 320, 564
BstMWI	GCNNNNNNNGC	5 cut(s)	262, 353, 436, 445, 712
BstNI	CCWGG	2 cut(s)	310, 464
BstPAI	GACNNNNGTC	1 cut(s)	135
BstSCI	CCNGG	4 cut(s)	186, 308, 462, 540
BstSFI	CTRYAG	1 cut(s)	206
BstUI	CGCG	2 cut(s)	345, 680
BstV1I	GCAGC	3 cut(s)	279, 699, 870
BstX2I	RGATCY	2 cut(s)	40, 320
BstXI	CCANNNNNNTGG	1 cut(s)	37
BstYI	RGATCY	2 cut(s)	40, 320
Bsu36I	CCTNAGG	1 cut(s)	470
BsuI	GTATCC	1 cut(s)	839
BsuRI	GGCC	4 cut(s)	155, 201, 468, 614
BtsCI	GGATG	7 cut(s)	486, 550, 586, 775, 820, 876, 918
Cac8I	GCNNGC	2 cut(s)	213, 704
CaiI	CAGNNNCTG	1 cut(s)	469
CciI	TCATGA	1 cut(s)	789
CfoI	GCGC	2 cut(s)	267, 347
Cfr13I	GGNCC	5 cut(s)	70, 199, 340, 402, 466
CseI	GACGC	2 cut(s)	522, 686
Csp6I	GTAC	1 cut(s)	493
CviAII	CATG	5 cut(s)	337, 626, 733, 785, 790
CviQI	GTAC	1 cut(s)	493
DdeI	CTNAG	6 cut(s)	246, 324, 470, 727, 753, 830
DpnI	GATC	3 cut(s)	42, 322, 566
DpnII	GATC	3 cut(s)	40, 320, 564
DraIII	CACNNNGTG	1 cut(s)	808
Eam1104I	CTCTTC	3 cut(s)	144, 216, 692
EarI	CTCTTC	3 cut(s)	144, 216, 692
EciI	GGCGGA	1 cut(s)	361
Eco130I	CCWWGG	2 cut(s)	133, 840
Eco47I	GGWCC	3 cut(s)	70, 340, 402
Eco57I	CTGAAG	1 cut(s)	320
Eco81I	CCTNAGG	1 cut(s)	470
EcoO109I	RGGNCCY	1 cut(s)	466
EcoRII	CCWGG	2 cut(s)	308, 462
EcoT14I	CCWWGG	2 cut(s)	133, 840
ErhI	CCWWGG	2 cut(s)	133, 840
Esp3I	CGTCTC	1 cut(s)	505
FaeI	CATG	5 cut(s)	340, 629, 736, 788, 793
FaqI	GGGAC	2 cut(s)	203, 217
FatI	CATG	5 cut(s)	336, 625, 732, 784, 789
FauNDI	CATATG	1 cut(s)	120
FblI	GTMKAC	1 cut(s)	205
Fnu4HI	GCNGC	6 cut(s)	268, 354, 592, 681, 713, 859
FokI	GGATG	7 cut(s)	493, 557, 593, 782, 827, 883, 905
Fsp4HI	GCNGC	6 cut(s)	268, 354, 592, 681, 713, 859
FspBI	CTAG	1 cut(s)	933
FspI	TGCGCA	1 cut(s)	266
GlaI	GCGC	2 cut(s)	266, 346
GluI	GCNGC	6 cut(s)	268, 354, 592, 681, 713, 859
GsaI	CCCAGC	1 cut(s)	84
GsuI	CTGGAG	3 cut(s)	350, 552, 728
HaeIII	GGCC	4 cut(s)	155, 201, 468, 614
HapII	CCGG	2 cut(s)	187, 542
HgaI	GACGC	2 cut(s)	522, 686
HhaI	GCGC	2 cut(s)	267, 347
Hin1II	CATG	5 cut(s)	340, 629, 736, 788, 793
Hin6I	GCGC	2 cut(s)	265, 345
HinP1I	GCGC	2 cut(s)	265, 345
HinfI	GANTC	1 cut(s)	882
HpaII	CCGG	2 cut(s)	187, 542
HphI	GGTGA	4 cut(s)	19, 175, 409, 538
Hpy166II	GTNNAC	1 cut(s)	206
Hpy188I	TCNGA	4 cut(s)	247, 320, 720, 831
Hpy188III	TCNNGA	3 cut(s)	571, 790, 948
Hpy8I	GTNNAC	1 cut(s)	206
Hpy99I	CGWCG	1 cut(s)	680
HpyAV	CCTTC	6 cut(s)	34, 154, 377, 604, 679, 805
HpyCH4III	ACNGT	4 cut(s)	295, 505, 526, 652
HpyCH4V	TGCA	3 cut(s)	124, 256, 715
HpyF10VI	GCNNNNNNNGC	5 cut(s)	262, 353, 436, 445, 712
HpyF3I	CTNAG	6 cut(s)	246, 324, 470, 727, 753, 830
Hsp92II	CATG	5 cut(s)	340, 629, 736, 788, 793
HspAI	GCGC	2 cut(s)	265, 345
Kzo9I	GATC	3 cut(s)	40, 320, 564
LguI	GCTCTTC	1 cut(s)	692
LmnI	GCTCC	4 cut(s)	445, 709, 855, 900
Lsp1109I	GCAGC	3 cut(s)	279, 699, 870
LweI	GCATC	1 cut(s)	724
MaeI	CTAG	1 cut(s)	933
MaeIII	GTNAC	2 cut(s)	415, 526
MalI	GATC	3 cut(s)	42, 322, 566
MboI	GATC	3 cut(s)	40, 320, 564
MboII	GAAGA	5 cut(s)	99, 161, 233, 313, 709
MflI	RGATCY	2 cut(s)	40, 320
MhlI	GDGCHC	1 cut(s)	540
MluCI	AATT	3 cut(s)	273, 408, 943
MlyI	GAGTC	1 cut(s)	891
MseI	TTAA	1 cut(s)	276
MslI	CAYNNNNRTG	3 cut(s)	90, 543, 737
MspA1I	CMGCKG	1 cut(s)	328
MspI	CCGG	2 cut(s)	187, 542
MspR9I	CCNGG	4 cut(s)	188, 310, 464, 542
MvaI	CCWGG	2 cut(s)	310, 464
MvnI	CGCG	2 cut(s)	345, 680
MwoI	GCNNNNNNNGC	5 cut(s)	262, 353, 436, 445, 712
NciI	CCSGG	2 cut(s)	188, 542
NdeI	CATATG	1 cut(s)	120
NdeII	GATC	3 cut(s)	40, 320, 564
NlaIII	CATG	5 cut(s)	340, 629, 736, 788, 793
NlaIV	GGNNCC	2 cut(s)	388, 820
NmeAIII	GCCGAG	1 cut(s)	181
NmuCI	GTSAC	2 cut(s)	415, 526
NsbI	TGCGCA	1 cut(s)	266
PagI	TCATGA	1 cut(s)	789
PciSI	GCTCTTC	1 cut(s)	692
PfoI	TCCNGGA	1 cut(s)	186
PkrI	GCNGC	6 cut(s)	269, 355, 593, 682, 714, 860
PleI	GAGTC	1 cut(s)	890
PpsI	GAGTC	1 cut(s)	890
PshAI	GACNNNNGTC	1 cut(s)	135
PshBI	ATTAAT	1 cut(s)	276
Psp6I	CCWGG	2 cut(s)	308, 462
PspFI	CCCAGC	1 cut(s)	80
PspGI	CCWGG	2 cut(s)	308, 462
PspN4I	GGNNCC	2 cut(s)	388, 820
PspPI	GGNCC	5 cut(s)	70, 199, 340, 402, 466
PstNI	CAGNNNCTG	1 cut(s)	469
PsuI	RGATCY	2 cut(s)	40, 320
PvuII	CAGCTG	1 cut(s)	328
RsaI	GTAC	1 cut(s)	494
RsaNI	GTAC	1 cut(s)	493
RseI	CAYNNNNRTG	3 cut(s)	90, 543, 737
SapI	GCTCTTC	1 cut(s)	692
SaqAI	TTAA	1 cut(s)	276
SatI	GCNGC	6 cut(s)	268, 354, 592, 681, 713, 859
Sau3AI	GATC	3 cut(s)	40, 320, 564
Sau96I	GGNCC	5 cut(s)	70, 199, 340, 402, 466
SchI	GAGTC	1 cut(s)	891
ScrFI	CCNGG	4 cut(s)	188, 310, 464, 542
SduI	GDGCHC	1 cut(s)	540
SfaNI	GCATC	1 cut(s)	724
SfcI	CTRYAG	1 cut(s)	206
SinI	GGWCC	3 cut(s)	70, 340, 402
SmiMI	CAYNNNNRTG	3 cut(s)	90, 543, 737
SmlI	CTYRAG	1 cut(s)	440
SmoI	CTYRAG	1 cut(s)	440
Sse9I	AATT	3 cut(s)	273, 408, 943
SsiI	CCGC	6 cut(s)	281, 343, 354, 372, 591, 680
SspMI	CTAG	1 cut(s)	933
StyD4I	CCNGG	4 cut(s)	186, 308, 462, 540
StyI	CCWWGG	2 cut(s)	133, 840
TaaI	ACNGT	4 cut(s)	295, 505, 526, 652
TaqI	TCGA	2 cut(s)	558, 572
TaqII	GACCGA	1 cut(s)	503
TasI	AATT	3 cut(s)	273, 408, 943
TatI	WGTACW	1 cut(s)	492
TauI	GCSGC	3 cut(s)	356, 594, 683
Tru1I	TTAA	1 cut(s)	276
Tru9I	TTAA	1 cut(s)	276
TseFI	GTSAC	2 cut(s)	415, 526
TseI	GCWGC	3 cut(s)	267, 712, 858
Tsp45I	GTSAC	2 cut(s)	415, 526
TspDTI	ATGAA	3 cut(s)	17, 74, 806
TspGWI	ACGGA	1 cut(s)	438
VpaK11BI	GGWCC	3 cut(s)	70, 340, 402
VspI	ATTAAT	1 cut(s)	276
XmiI	GTMKAC	1 cut(s)	205
XspI	CTAG	1 cut(s)	933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.