Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0014232

Physical Location & Seq

Genomic Coordinates Reverse (-)

14973427 .. 14976309

Gene Structure 2883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G129700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 357 bp

ATGGGAGGCAAGTGCCCACACAGAAGCGTCAAGAAAAGGAGATACTCTCACAAGACTCACCGCCGCGCCAAATTCCTCGTCAATGGTGATGATATGGTGTATGATAGTCTGAATAAGGCAGATGAGCAGACGAAGCCATTGCCTCCTGATCAAGATCTCCCTGGGATGGGTCAATTCTACTGTCTTCACTGCGACCGGTACTTCAATAATGCGGCGGTGAGGGATGACCATTTCAAGACAAAGCGTCACAGGAGGCGTGTAAAGCTGCTGATGGAAGCACCACACACCCAGCTGGATGCTGATTTAGCTGCTGGGATGGGTATGCCTGATAATGGTCCCAAGCTTATGTCTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000055 GO:0003674 GO:0005488 GO:0005575 GO:0006403 GO:0006405 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0015031 GO:0015833 GO:0015931 GO:0022613 GO:0030684 GO:0030687 GO:0031503 GO:0032991 GO:0033036 GO:0033750 GO:0034613 GO:0042254 GO:0042886 GO:0043021 GO:0043023 GO:0044085 GO:0044877 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071705 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_jaz

Protein Analysis

119

Amino Acids

13.63

Weight (kDa)

9.63

Isoelectric Point (pI)

58.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36930
fragaria_vesca	FvH4_6g16440
malus_domestica	MD00G1155400.v1.1 MD12G1112600.v1.1
prunus_persica	Prupe.7G129700_v2.0.a1 Prupe.7G129700_v2.0.a1
pyrus_communis	pycom04g08760
rosa_chinensis	RchiOBHm_Chr3g0470301
rosa_laevigata	RLG00000024280
rosa_multiflora	Rmu_sc0002659.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410970
rosa_rugosa	Rorug03G0108000
rosa_samantha	Rh3AG157700 Rh3BG182000 Rh3CG172700 Rh3DG192900
rosa_wichuraiana	Rw3G015000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	66
AciI	CCGC	4 cut(s)	61, 64, 212, 215
AcsI	RAATTY	1 cut(s)	71
AfaI	GTAC	1 cut(s)	200
AfiI	CCNNNNNNNGG	3 cut(s)	166, 167, 332
AgeI	ACCGGT	1 cut(s)	195
AgsI	TTSAA	2 cut(s)	205, 235
AhdI	GACNNNNNGTC	1 cut(s)	243
AjnI	CCWGG	1 cut(s)	160
AluBI	AGCT	4 cut(s)	265, 292, 308, 343
AluI	AGCT	4 cut(s)	265, 292, 308, 343
ApeKI	GCWGC	2 cut(s)	265, 308
ApoI	RAATTY	1 cut(s)	71
ArsI	GACNNNNNNTTYG	2 cut(s)	63, 95
AsiGI	ACCGGT	1 cut(s)	195
AspLEI	GCGC	1 cut(s)	68
AspS9I	GGNCC	1 cut(s)	335
AsuHPI	GGTGA	3 cut(s)	50, 98, 229
AvaII	GGWCC	1 cut(s)	335
BaeGI	GKGCMC	1 cut(s)	17
BbsI	GAAGAC	1 cut(s)	176
BbvI	GCAGC	2 cut(s)	252, 295
BccI	CCATC	3 cut(s)	160, 265, 310
BcgI	CGANNNNNNTGC	2 cut(s)	121, 155
BciT130I	CCWGG	1 cut(s)	162
BclI	TGATCA	1 cut(s)	148
BglII	AGATCT	1 cut(s)	154
BisI	GCNGC	4 cut(s)	64, 213, 266, 309
BlsI	GCNGC	4 cut(s)	65, 214, 267, 310
Bme1390I	CCNGG	1 cut(s)	162
Bme18I	GGWCC	1 cut(s)	335
BmeRI	GACNNNNNGTC	1 cut(s)	243
BmgT120I	GGNCC	1 cut(s)	335
BmiI	GGNNCC	1 cut(s)	337
BmrFI	CCNGG	1 cut(s)	162
BmsI	GCATC	1 cut(s)	286
BpiI	GAAGAC	1 cut(s)	176
BplI	GAGNNNNNCTC	2 cut(s)	31, 63
BsaBI	GATNNNNATC	1 cut(s)	153
BsaJI	CCNNGG	2 cut(s)	160, 161
BsaWI	WCCGGW	1 cut(s)	195
Bsc4I	CCNNNNNNNGG	3 cut(s)	166, 167, 332
Bse118I	RCCGGY	1 cut(s)	195
Bse3DI	GCAATG	1 cut(s)	137
Bse8I	GATNNNNATC	1 cut(s)	153
BseBI	CCWGG	1 cut(s)	162
BseDI	CCNNGG	2 cut(s)	160, 161
BseGI	GGATG	4 cut(s)	171, 229, 301, 321
BseJI	GATNNNNATC	1 cut(s)	153
BseLI	CCNNNNNNNGG	3 cut(s)	166, 167, 332
BseMI	GCAATG	1 cut(s)	137
BseSI	GKGCMC	1 cut(s)	17
BseXI	GCAGC	2 cut(s)	252, 295
BseYI	CCCAGC	2 cut(s)	288, 311
Bsh1236I	CGCG	1 cut(s)	66
Bsh1285I	CGRYCG	1 cut(s)	196
BshTI	ACCGGT	1 cut(s)	195
BsiEI	CGRYCG	1 cut(s)	196
BsiSI	CCGG	1 cut(s)	196
BslFI	GGGAC	1 cut(s)	321
BslI	CCNNNNNNNGG	3 cut(s)	166, 167, 332
BsmFI	GGGAC	1 cut(s)	321
Bsp1286I	GDGCHC	1 cut(s)	17
Bsp143I	GATC	2 cut(s)	148, 154
BspACI	CCGC	4 cut(s)	61, 64, 212, 215
BspFNI	CGCG	1 cut(s)	66
BspLI	GGNNCC	1 cut(s)	337
BsrDI	GCAATG	1 cut(s)	137
BsrFI	RCCGGY	1 cut(s)	195
BssAI	RCCGGY	1 cut(s)	195
BssECI	CCNNGG	2 cut(s)	160, 161
BssMI	GATC	2 cut(s)	148, 154
Bst2UI	CCWGG	1 cut(s)	162
Bst4CI	ACNGT	1 cut(s)	182
BstF5I	GGATG	4 cut(s)	171, 229, 301, 321
BstFNI	CGCG	1 cut(s)	66
BstHHI	GCGC	1 cut(s)	68
BstKTI	GATC	2 cut(s)	151, 157
BstMBI	GATC	2 cut(s)	148, 154
BstMCI	CGRYCG	1 cut(s)	196
BstMWI	GCNNNNNNNGC	3 cut(s)	133, 262, 305
BstNI	CCWGG	1 cut(s)	162
BstSCI	CCNGG	1 cut(s)	160
BstSLI	GKGCMC	1 cut(s)	17
BstUI	CGCG	1 cut(s)	66
BstV1I	GCAGC	2 cut(s)	252, 295
BstV2I	GAAGAC	1 cut(s)	176
BstX2I	RGATCY	1 cut(s)	154
BstYI	RGATCY	1 cut(s)	154
BtsCI	GGATG	4 cut(s)	171, 229, 301, 321
BtsI	GCAGTG	1 cut(s)	187
BtsIMutI	CAGTG	1 cut(s)	187
CfoI	GCGC	1 cut(s)	68
Cfr10I	RCCGGY	1 cut(s)	195
Cfr13I	GGNCC	1 cut(s)	335
CseI	GACGC	2 cut(s)	16, 233
Csp6I	GTAC	1 cut(s)	199
CspAI	ACCGGT	1 cut(s)	195
CviJI	RGCY	5 cut(s)	136, 265, 292, 308, 343
CviKI_1	RGCY	5 cut(s)	136, 265, 292, 308, 343
CviQI	GTAC	1 cut(s)	199
DpnI	GATC	2 cut(s)	150, 156
DpnII	GATC	2 cut(s)	148, 154
DriI	GACNNNNNGTC	1 cut(s)	243
Eam1105I	GACNNNNNGTC	1 cut(s)	243
Eco47I	GGWCC	1 cut(s)	335
EcoRII	CCWGG	1 cut(s)	160
FaiI	YATR	4 cut(s)	95, 102, 323, 347
FaqI	GGGAC	1 cut(s)	321
FbaI	TGATCA	1 cut(s)	148
Fnu4HI	GCNGC	4 cut(s)	64, 213, 266, 309
FokI	GGATG	4 cut(s)	178, 236, 308, 328
Fsp4HI	GCNGC	4 cut(s)	64, 213, 266, 309
GlaI	GCGC	1 cut(s)	67
GluI	GCNGC	4 cut(s)	64, 213, 266, 309
GsaI	CCCAGC	2 cut(s)	292, 315
HapII	CCGG	1 cut(s)	196
HgaI	GACGC	2 cut(s)	16, 233
HhaI	GCGC	1 cut(s)	68
Hin6I	GCGC	1 cut(s)	66
HinP1I	GCGC	1 cut(s)	66
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	1 cut(s)	55
HpaII	CCGG	1 cut(s)	196
HphI	GGTGA	3 cut(s)	50, 98, 229
Hpy188I	TCNGA	2 cut(s)	111, 356
Hpy188III	TCNNGA	4 cut(s)	31, 146, 152, 235
HpyCH4III	ACNGT	1 cut(s)	182
HpyF10VI	GCNNNNNNNGC	3 cut(s)	133, 262, 305
HspAI	GCGC	1 cut(s)	66
Ksp22I	TGATCA	1 cut(s)	148
Kzo9I	GATC	2 cut(s)	148, 154
LpnPI	CCDG	9 cut(s)	147, 159, 174, 209, 235, 278, 297, 302, 339
Lsp1109I	GCAGC	2 cut(s)	252, 295
LweI	GCATC	1 cut(s)	286
MaeIII	GTNAC	1 cut(s)	245
MalI	GATC	2 cut(s)	150, 156
MboI	GATC	2 cut(s)	148, 154
MboII	GAAGA	1 cut(s)	176
MflI	RGATCY	1 cut(s)	154
MhlI	GDGCHC	1 cut(s)	17
MluCI	AATT	2 cut(s)	71, 173
MlyI	GAGTC	1 cut(s)	49
MnlI	CCTC	4 cut(s)	86, 153, 213, 246
MspA1I	CMGCKG	1 cut(s)	292
MspI	CCGG	1 cut(s)	196
MspR9I	CCNGG	1 cut(s)	162
MvaI	CCWGG	1 cut(s)	162
MvnI	CGCG	1 cut(s)	66
MwoI	GCNNNNNNNGC	3 cut(s)	133, 262, 305
NdeII	GATC	2 cut(s)	148, 154
NlaIV	GGNNCC	1 cut(s)	337
NmuCI	GTSAC	1 cut(s)	245
PasI	CCCWGGG	1 cut(s)	161
PinAI	ACCGGT	1 cut(s)	195
PkrI	GCNGC	4 cut(s)	65, 214, 267, 310
PleI	GAGTC	1 cut(s)	49
PpsI	GAGTC	1 cut(s)	49
Psp6I	CCWGG	1 cut(s)	160
PspFI	CCCAGC	2 cut(s)	288, 311
PspGI	CCWGG	1 cut(s)	160
PspN4I	GGNNCC	1 cut(s)	337
PspPI	GGNCC	1 cut(s)	335
PsuI	RGATCY	1 cut(s)	154
PvuII	CAGCTG	1 cut(s)	292
RsaI	GTAC	1 cut(s)	200
RsaNI	GTAC	1 cut(s)	199
SatI	GCNGC	4 cut(s)	64, 213, 266, 309
Sau3AI	GATC	2 cut(s)	148, 154
Sau96I	GGNCC	1 cut(s)	335
SchI	GAGTC	1 cut(s)	49
ScrFI	CCNGG	1 cut(s)	162
SduI	GDGCHC	1 cut(s)	17
SetI	ASST	4 cut(s)	267, 294, 310, 345
SfaNI	GCATC	1 cut(s)	286
SinI	GGWCC	1 cut(s)	335
Sse9I	AATT	2 cut(s)	71, 173
SsiI	CCGC	4 cut(s)	61, 64, 212, 215
StyD4I	CCNGG	1 cut(s)	160
TaaI	ACNGT	1 cut(s)	182
TasI	AATT	2 cut(s)	71, 173
TauI	GCSGC	2 cut(s)	66, 215
TscAI	CASTG	1 cut(s)	194
TseFI	GTSAC	1 cut(s)	245
TseI	GCWGC	2 cut(s)	265, 308
Tsp45I	GTSAC	1 cut(s)	245
TspRI	CASTG	1 cut(s)	194
VpaK11BI	GGWCC	1 cut(s)	335
XapI	RAATTY	1 cut(s)	71

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.