Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015517

Physical Location & Seq

Genomic Coordinates Reverse (-)

15623832 .. 15625505

Gene Structure 1674 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G140700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGATCCAAGAACTGTTTGGCGGTGCAGGCCTTAGTAACATAGCAGGAGGAGGAGAGAGGAAATTAATCTCCATTCATGGTGGTACAACTTCTTCTCCTTCTCTTTCTCCTTCACAATCTCCTTCTTCTTCCACAACTACTACAACCACCGCGACCGCCACGACGACTACGACTACAGGTGAGAACTTGAGATGCCCGAGATGCGATTCTTCCAACACCAAATTCTGCTACTACAACAACTACAACCTTACTCAGCCCCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACAAAAGGAGGAGCTCTCCGGAATGTCCCAATTGGCGGTGGCTGCAGAAAAAACAAGAGTGCTACCGTGTCAACGACTCCCATAGGCAAGGCCGCCTCGGGGAAGTTGAAAATGGTTGCATCGGAAATTGGAAGGTCAGGATTCAGCGGGGGGTTCGACAACGATGTCCAAGCAAGCCCAATACTATGGGGCTCCCCTCAGAATTCTCATTTACTAGCCCTACTAAGAGCCAGTCATCAAAATCAAAACCCTAACCCTAACCCTAATCCTATATGCAATTCTGTAAATGTGAAGGAAGAGGGGGCTATGAATATGATTGGATCCCACATGATGACCACTGAGCCAGCAATGAGCACTGCTCGAACTCTGGGGTTGGATCCAGTGTGCCAGGCTCCTTCACTTGGTCTGTGCAGCTCTTTCTGGAGAAACAACAACCAAAATCAACAACCTCCACACCACAACCAACAAAACGGCTTCCCAGTTGGTCATGAGGTGCAAAGCAATATTGGAATTCAAGAACTGTTTCAGAGGCTAAGATCATCGTCGTCGTCATCATCAGGAGGTTATTATTCTGATCATTTAAATAATGTGGTTATGTCATCTTCTTCTTCTACATCCTCCATTTTGGATTCAACTCCGGCTGTTGGTGGCGGCGAAATGGGCTACTGGAACCCGGCATTTACAGCCTGGTCGTCAGATCTTCCCACAACCAACGGTGCATATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010016 GO:0010052 GO:0010103 GO:0010118 GO:0010374 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032881 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097159 GO:0140110 GO:1901363 GO:1902066 GO:1902680 GO:1903338 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-Dof

Protein Analysis

340

Amino Acids

36.0

Weight (kDa)

8.98

Isoelectric Point (pI)

58.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015517)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g14970
malus_domestica	MD02G1163500.v1.1 MD15G1276300.v1.1
prunus_persica	Prupe.7G140700_v2.0.a1
pyrus_communis	pycom02g12950 pycom15g23940
rosa_chinensis	RchiOBHm_Chr2g0104031
rosa_laevigata	RLG00000017279
rosa_multiflora	Rmu_sc0001720.1_g000009
rosa_roxburghii	Rroxscaffold_2G00139190
rosa_rugosa	Rorug02G0118700
rosa_samantha	Rh2AG168000 Rh2BG175000 Rh2CG173800 Rh2DG173500
rosa_wichuraiana	Rw2G013140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	455
Acc36I	ACCTGC	1 cut(s)	284
AccII	CGCG	1 cut(s)	152
AccIII	TCCGGA	1 cut(s)	309
AclWI	GGATC	4 cut(s)	606, 619, 662, 675
AcsI	RAATTY	3 cut(s)	221, 493, 801
AfaI	GTAC	1 cut(s)	85
AfiI	CCNNNNNNNGG	4 cut(s)	326, 390, 692, 935
AgsI	TTSAA	3 cut(s)	400, 806, 924
AjnI	CCWGG	2 cut(s)	678, 977
AjuI	GAANNNNNNNTTGG	2 cut(s)	206, 238
AluBI	AGCT	2 cut(s)	305, 705
AluI	AGCT	2 cut(s)	305, 705
Alw21I	GWGCWC	2 cut(s)	307, 647
AlwI	GGATC	4 cut(s)	606, 619, 662, 675
Ama87I	CYCGRG	2 cut(s)	196, 388
Aor13HI	TCCGGA	1 cut(s)	309
AoxI	GGCC	2 cut(s)	28, 381
ApeKI	GCWGC	2 cut(s)	333, 702
ApoI	RAATTY	3 cut(s)	221, 493, 801
AseI	ATTAAT	1 cut(s)	65
Asp700I	GAANNNNTTC	1 cut(s)	813
AsuC2I	CCSGG	1 cut(s)	965
AsuHPI	GGTGA	1 cut(s)	191
AvaI	CYCGRG	2 cut(s)	196, 388
BamHI	GGATCC	2 cut(s)	611, 667
BanII	GRGCYC	2 cut(s)	307, 485
BarI	GAAGNNNNNNTAC	2 cut(s)	76, 108
Bbv12I	GWGCWC	2 cut(s)	307, 647
BbvI	GCAGC	2 cut(s)	320, 714
BceAI	ACGGC	1 cut(s)	778
BciT130I	CCWGG	2 cut(s)	680, 979
BclI	TGATCA	1 cut(s)	865
BcnI	CCSGG	1 cut(s)	965
BfaI	CTAG	1 cut(s)	506
BfmI	CTRYAG	2 cut(s)	174, 334
BfuAI	ACCTGC	1 cut(s)	284
BglII	AGATCT	1 cut(s)	988
BisI	GCNGC	6 cut(s)	280, 283, 334, 384, 703, 943
BlsI	GCNGC	6 cut(s)	281, 284, 335, 385, 704, 944
Bme1390I	CCNGG	3 cut(s)	680, 965, 979
BmeT110I	CYCGRG	2 cut(s)	196, 388
BmiI	GGNNCC	5 cut(s)	484, 613, 669, 684, 962
BmrFI	CCNGG	3 cut(s)	680, 965, 979
BmrI	ACTGGG	1 cut(s)	764
BmsI	GCATC	3 cut(s)	182, 191, 419
BmuI	ACTGGG	1 cut(s)	764
BplI	GAGNNNNNCTC	4 cut(s)	291, 323, 634, 666
BpmI	CTGGAG	1 cut(s)	733
BpuEI	CTTGAG	1 cut(s)	208
BpuMI	CCSGG	1 cut(s)	965
BsaJI	CCNNGG	1 cut(s)	387
BsaWI	WCCGGW	1 cut(s)	309
BsaXI	ACNNNNNCTCC	2 cut(s)	79, 109
Bsc4I	CCNNNNNNNGG	4 cut(s)	326, 390, 692, 935
Bse1I	ACTGG	5 cut(s)	293, 522, 671, 770, 962
Bse3DI	GCAATG	1 cut(s)	645
BseAI	TCCGGA	1 cut(s)	309
BseBI	CCWGG	2 cut(s)	680, 979
BseDI	CCNNGG	1 cut(s)	387
BseGI	GGATG	1 cut(s)	905
BseLI	CCNNNNNNNGG	4 cut(s)	326, 390, 692, 935
BseMI	GCAATG	1 cut(s)	645
BseMII	CTCAG	3 cut(s)	266, 503, 621
BseNI	ACTGG	5 cut(s)	293, 522, 671, 770, 962
BseRI	GAGGAG	3 cut(s)	63, 66, 315
BseXI	GCAGC	2 cut(s)	320, 714
BsgI	GTGCAG	2 cut(s)	45, 721
Bsh1236I	CGCG	1 cut(s)	152
Bsh1285I	CGRYCG	1 cut(s)	156
BshFI	GGCC	2 cut(s)	30, 383
BsiEI	CGRYCG	1 cut(s)	156
BsiHKAI	GWGCWC	2 cut(s)	307, 647
BsiHKCI	CYCGRG	2 cut(s)	196, 388
BsiSI	CCGG	3 cut(s)	310, 929, 965
BslFI	GGGAC	1 cut(s)	302
BslI	CCNNNNNNNGG	4 cut(s)	326, 390, 692, 935
BsmFI	GGGAC	1 cut(s)	302
BsnI	GGCC	2 cut(s)	30, 383
BsoBI	CYCGRG	2 cut(s)	196, 388
Bsp1286I	GDGCHC	3 cut(s)	307, 485, 647
Bsp13I	TCCGGA	1 cut(s)	309
Bsp143I	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
BspANI	GGCC	2 cut(s)	30, 383
BspCNI	CTCAG	3 cut(s)	265, 502, 622
BspEI	TCCGGA	1 cut(s)	309
BspFNI	CGCG	1 cut(s)	152
BspHI	TCATGA	1 cut(s)	778
BspLI	GGNNCC	5 cut(s)	484, 613, 669, 684, 962
BspMAI	CTGCAG	1 cut(s)	338
BspMI	ACCTGC	1 cut(s)	284
BspPI	GGATC	4 cut(s)	606, 619, 662, 675
BsrDI	GCAATG	1 cut(s)	645
BsrI	ACTGG	5 cut(s)	293, 522, 671, 770, 962
BssECI	CCNNGG	1 cut(s)	387
BssMI	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
Bst2UI	CCWGG	2 cut(s)	680, 979
Bst4CI	ACNGT	4 cut(s)	15, 358, 813, 1007
Bst6I	CTCTTC	1 cut(s)	582
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstC8I	GCNNGC	3 cut(s)	28, 466, 636
BstDEI	CTNAG	6 cut(s)	32, 252, 489, 515, 630, 824
BstF5I	GGATG	1 cut(s)	905
BstFNI	CGCG	1 cut(s)	152
BstKTI	GATC	6 cut(s)	6, 614, 670, 830, 868, 991
BstMBI	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
BstMCI	CGRYCG	1 cut(s)	156
BstMWI	GCNNNNNNNGC	7 cut(s)	27, 201, 267, 276, 333, 951, 974
BstNI	CCWGG	2 cut(s)	680, 979
BstSCI	CCNGG	3 cut(s)	678, 963, 977
BstSFI	CTRYAG	2 cut(s)	174, 334
BstUI	CGCG	1 cut(s)	152
BstV1I	GCAGC	2 cut(s)	320, 714
BstX2I	RGATCY	3 cut(s)	611, 667, 988
BstXI	CCANNNNNNTGG	1 cut(s)	477
BstYI	RGATCY	3 cut(s)	611, 667, 988
BsuRI	GGCC	2 cut(s)	30, 383
BtsCI	GGATG	1 cut(s)	905
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	3 cut(s)	627, 645, 678
BveI	ACCTGC	1 cut(s)	284
Cac8I	GCNNGC	3 cut(s)	28, 466, 636
CciI	TCATGA	1 cut(s)	778
Csp6I	GTAC	1 cut(s)	84
CviAII	CATG	3 cut(s)	77, 619, 779
CviQI	GTAC	1 cut(s)	84
DdeI	CTNAG	6 cut(s)	32, 252, 489, 515, 630, 824
DpnI	GATC	6 cut(s)	5, 613, 669, 829, 867, 990
DpnII	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
DraI	TTTAAA	1 cut(s)	873
DrdI	GACNNNNNNGTC	1 cut(s)	455
DseDI	GACNNNNNNGTC	1 cut(s)	455
Eam1104I	CTCTTC	1 cut(s)	582
EarI	CTCTTC	1 cut(s)	582
Ecl136II	GAGCTC	1 cut(s)	305
Eco147I	AGGCCT	1 cut(s)	30
Eco24I	GRGCYC	2 cut(s)	307, 485
Eco53kI	GAGCTC	1 cut(s)	305
Eco88I	CYCGRG	2 cut(s)	196, 388
EcoICRI	GAGCTC	1 cut(s)	305
EcoRI	GAATTC	2 cut(s)	493, 801
EcoRII	CCWGG	2 cut(s)	678, 977
EcoT38I	GRGCYC	2 cut(s)	307, 485
FaeI	CATG	3 cut(s)	80, 622, 782
FaqI	GGGAC	1 cut(s)	302
FatI	CATG	3 cut(s)	76, 618, 778
FauI	CCCGC	2 cut(s)	266, 431
FbaI	TGATCA	1 cut(s)	865
Fnu4HI	GCNGC	6 cut(s)	280, 283, 334, 384, 703, 943
FokI	GGATG	1 cut(s)	892
FriOI	GRGCYC	2 cut(s)	307, 485
Fsp4HI	GCNGC	6 cut(s)	280, 283, 334, 384, 703, 943
FspBI	CTAG	1 cut(s)	506
GluI	GCNGC	6 cut(s)	280, 283, 334, 384, 703, 943
GsuI	CTGGAG	1 cut(s)	733
HaeIII	GGCC	2 cut(s)	30, 383
HapII	CCGG	3 cut(s)	310, 929, 965
Hin1II	CATG	3 cut(s)	80, 622, 782
HincII	GTYRAC	1 cut(s)	363
HindII	GTYRAC	1 cut(s)	363
HinfI	GANTC	4 cut(s)	206, 367, 432, 920
HpaII	CCGG	3 cut(s)	310, 929, 965
HphI	GGTGA	1 cut(s)	191
Hpy166II	GTNNAC	1 cut(s)	363
Hpy188I	TCNGA	5 cut(s)	415, 492, 819, 865, 988
Hpy188III	TCNNGA	6 cut(s)	310, 429, 712, 779, 806, 849
Hpy8I	GTNNAC	1 cut(s)	363
Hpy99I	CGWCG	3 cut(s)	166, 838, 841
HpyAV	CCTTC	6 cut(s)	108, 120, 132, 417, 577, 696
HpyCH4III	ACNGT	4 cut(s)	15, 358, 813, 1007
HpyCH4V	TGCA	8 cut(s)	26, 270, 336, 410, 567, 702, 787, 1010
HpyF10VI	GCNNNNNNNGC	7 cut(s)	27, 201, 267, 276, 333, 951, 974
HpyF3I	CTNAG	6 cut(s)	32, 252, 489, 515, 630, 824
Hsp92II	CATG	3 cut(s)	80, 622, 782
Kpn2I	TCCGGA	1 cut(s)	309
Ksp22I	TGATCA	1 cut(s)	865
Kzo9I	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
LmnI	GCTCC	3 cut(s)	302, 488, 688
Lsp1109I	GCAGC	2 cut(s)	320, 714
LweI	GCATC	3 cut(s)	182, 191, 419
MaeI	CTAG	1 cut(s)	506
MaeIII	GTNAC	1 cut(s)	35
MalI	GATC	6 cut(s)	5, 613, 669, 829, 867, 990
MboI	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
MboII	GAAGA	9 cut(s)	84, 117, 120, 201, 599, 885, 888, 891, 983
MfeI	CAATTG	1 cut(s)	321
MflI	RGATCY	3 cut(s)	611, 667, 988
MhlI	GDGCHC	3 cut(s)	307, 485, 647
MluCI	AATT	7 cut(s)	62, 221, 321, 417, 493, 568, 801
MlyI	GAGTC	1 cut(s)	361
MmeI	TCCRAC	2 cut(s)	237, 645
MroI	TCCGGA	1 cut(s)	309
MroXI	GAANNNNTTC	1 cut(s)	813
MseI	TTAA	3 cut(s)	65, 872, 1018
MspA1I	CMGCKG	1 cut(s)	438
MspI	CCGG	3 cut(s)	310, 929, 965
MspR9I	CCNGG	3 cut(s)	680, 965, 979
MunI	CAATTG	1 cut(s)	321
MvaI	CCWGG	2 cut(s)	680, 979
MvnI	CGCG	1 cut(s)	152
MwoI	GCNNNNNNNGC	7 cut(s)	27, 201, 267, 276, 333, 951, 974
NciI	CCSGG	1 cut(s)	965
NdeII	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
NlaIII	CATG	3 cut(s)	80, 622, 782
NlaIV	GGNNCC	5 cut(s)	484, 613, 669, 684, 962
PagI	TCATGA	1 cut(s)	778
PceI	AGGCCT	1 cut(s)	30
PcsI	WCGNNNNNNNCGW	1 cut(s)	167
PdmI	GAANNNNTTC	1 cut(s)	813
PfeI	GAWTC	3 cut(s)	206, 432, 920
PkrI	GCNGC	6 cut(s)	281, 284, 335, 385, 704, 944
PleI	GAGTC	1 cut(s)	361
PpsI	GAGTC	1 cut(s)	361
PshBI	ATTAAT	1 cut(s)	65
Psp124BI	GAGCTC	1 cut(s)	307
Psp6I	CCWGG	2 cut(s)	678, 977
PspGI	CCWGG	2 cut(s)	678, 977
PspN4I	GGNNCC	5 cut(s)	484, 613, 669, 684, 962
PstI	CTGCAG	1 cut(s)	338
PsuI	RGATCY	3 cut(s)	611, 667, 988
RsaI	GTAC	1 cut(s)	85
RsaNI	GTAC	1 cut(s)	84
SacI	GAGCTC	1 cut(s)	307
SaqAI	TTAA	3 cut(s)	65, 872, 1018
SatI	GCNGC	6 cut(s)	280, 283, 334, 384, 703, 943
Sau3AI	GATC	6 cut(s)	3, 611, 667, 827, 865, 988
SchI	GAGTC	1 cut(s)	361
ScrFI	CCNGG	3 cut(s)	680, 965, 979
SduI	GDGCHC	3 cut(s)	307, 485, 647
SetI	ASST	9 cut(s)	181, 249, 278, 307, 428, 707, 742, 786, 856
SfaNI	GCATC	3 cut(s)	182, 191, 419
SfcI	CTRYAG	2 cut(s)	174, 334
SmiI	ATTTAAAT	1 cut(s)	873
SmlI	CTYRAG	1 cut(s)	187
SmoI	CTYRAG	1 cut(s)	187
Sse9I	AATT	7 cut(s)	62, 221, 321, 417, 493, 568, 801
SseBI	AGGCCT	1 cut(s)	30
SspI	AATATT	1 cut(s)	796
SspMI	CTAG	1 cut(s)	506
SstI	GAGCTC	1 cut(s)	307
StuI	AGGCCT	1 cut(s)	30
StyD4I	CCNGG	3 cut(s)	678, 963, 977
SwaI	ATTTAAAT	1 cut(s)	873
TaaI	ACNGT	4 cut(s)	15, 358, 813, 1007
TaqI	TCGA	2 cut(s)	447, 652
TasI	AATT	7 cut(s)	62, 221, 321, 417, 493, 568, 801
TauI	GCSGC	4 cut(s)	282, 285, 386, 945
TfiI	GAWTC	3 cut(s)	206, 432, 920
Tru1I	TTAA	3 cut(s)	65, 872, 1018
Tru9I	TTAA	3 cut(s)	65, 872, 1018
TscAI	CASTG	3 cut(s)	634, 652, 678
TseI	GCWGC	2 cut(s)	333, 702
TspDTI	ATGAA	2 cut(s)	65, 614
TspRI	CASTG	3 cut(s)	634, 652, 678
VspI	ATTAAT	1 cut(s)	65
XapI	RAATTY	3 cut(s)	221, 493, 801
XcmI	CCANNNNNNNNNTGG	1 cut(s)	14
XmnI	GAANNNNTTC	1 cut(s)	813
XspI	CTAG	1 cut(s)	506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.