Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006839

Physical Location & Seq

Genomic Coordinates Reverse (-)

18148136 .. 18150882

Gene Structure 2747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G189000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGGGACGAAGAATAATGGAATGGGCAGCTCGGTCTGATTACATGGGCGGCATTCCAAGGAAGATGGTGATCATGGCGGTGGGGGGTTTGGCAAAGGCCGCCGTCTCTTTGCTCAACAACACCACTGTTCACAATGCCGATACACTCCTTCGTCTGGTTCGGTCTCGGCCTCCTGGTGTACCACTCGTCACTGTTAGCAACCACATGTCCACCATGGATGACCCTTTGTTGTGGGGTTTCAAGGGCTTTCCCATCACGGATGCGAAATTGTCTCGGTGGGCTTTGGCTGCCGAGGACATTTGTTTCAAAAGTTCAATGCTTTCTTACTTCTTCAGACTTGGGAAGTGCATACCAATTATACGGGGTGGTGGCATTTATCAAGAACACATGGACGAAGCTCTTGAGCGTTTAAGTGAAGGAGAATGGTTGCATACATTTCCAGAAGGAAAAGTGTCCCAGGAAGATGCACCTATTAGAAGATTGAAATGGGGAACTGCTAGTCTCATTGCTCGTGCTCCTGTGACCCCTATAGTTTTGCCGATTGTCCATACTGGATTTGAACAGCTCTTTGAAGTCCTGGACAATGATGTAAATAAACAGCGGCATTCATGTGGCAGAACTTTATCCATCTATGTGATGCCTGAGAACTTTTATCGTGGTAAAAGGCCTCCTTTTCCATTATGGAATAAGAACATTAAGATAATTGTTGGCGAGCCAATGGAACTTGACCTTCCTAAAATGAGGCAGATGGCAATGTGTCTGTCCCGTAATATTTCACATCCTACTTTAGGATGGCCAAGCACTTGCCCAGGTGGTCTGGATGAGGCAGCACAAAGATGTCTGTACATTGCAATTTCAGAGAAAATCCAAAATGTCATGGAGACCTTGCGAACTTTTGCTAGAAGTTTTTCAAAGTCAAAAGATCAAAATCTTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0007275 GO:0007507 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0016020 GO:0016043 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0032048 GO:0032501 GO:0032502 GO:0035965 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046471 GO:0046486 GO:0048513 GO:0048731 GO:0048856 GO:0061024 GO:0071617 GO:0071704 GO:0071840 GO:0071944 GO:0072359

KEGG Pathways

Metabolic & Signaling

ko00564 ko00790 ko01523 map00564 map00790 map01523

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

313

Amino Acids

35.15

Weight (kDa)

9.27

Isoelectric Point (pI)

50.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78690 AT1G78690 AT1G78690 AT1G78690 AT1G78690
fragaria_vesca	FvH4_1g09860 FvH4_1g09860
malus_domestica	MD02G1106200.v1.1 MD15G1226000.v1.1
prunus_persica	Prupe.7G189000_v2.0.a1 Prupe.7G189000_v2.0.a1 Prupe.7G189000_v2.0.a1
pyrus_communis	pycom02g08400 pycom15g20090
rosa_chinensis	RchiOBHm_Chr2g0096581
rosa_laevigata	RLG00000016651
rosa_multiflora	Rmu_sc0004096.1_g000003 Rmu_sc0014659.1_g000002
rosa_roxburghii	Rroxscaffold_2G00145520
rosa_rugosa	Rorug02G0058800 Rorug02G0058900
rosa_samantha	Rh2AG105900 Rh2BG108400 Rh2CG110200 Rh2DG109000
rosa_wichuraiana	Rw2G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	48, 77, 99, 601
AcoI	YGGCCR	1 cut(s)	794
AcuI	CTGAAG	1 cut(s)	316
AfaI	GTAC	2 cut(s)	180, 845
AfiI	CCNNNNNNNGG	2 cut(s)	154, 788
AflIII	ACRYGT	1 cut(s)	204
AgsI	TTSAA	7 cut(s)	241, 307, 315, 484, 560, 572, 912
AjnI	CCWGG	4 cut(s)	172, 456, 576, 808
AluBI	AGCT	3 cut(s)	29, 398, 565
AluI	AGCT	3 cut(s)	29, 398, 565
Alw21I	GWGCWC	1 cut(s)	517
Alw26I	GTCTC	5 cut(s)	109, 168, 276, 506, 875
AoxI	GGCC	4 cut(s)	96, 167, 665, 794
ApeKI	GCWGC	3 cut(s)	26, 287, 827
Asp700I	GAANNNNTTC	1 cut(s)	907
AsuHPI	GGTGA	1 cut(s)	79
BalI	TGGCCA	1 cut(s)	796
BauI	CACGAG	1 cut(s)	510
Bbv12I	GWGCWC	1 cut(s)	517
BbvI	GCAGC	3 cut(s)	38, 274, 839
BccI	CCATC	5 cut(s)	58, 260, 635, 742, 786
BceAI	ACGGC	1 cut(s)	86
BciT130I	CCWGG	4 cut(s)	174, 458, 578, 810
BclI	TGATCA	1 cut(s)	69
BcoDI	GTCTC	5 cut(s)	109, 168, 276, 506, 875
BfaI	CTAG	3 cut(s)	498, 900, 937
BfmI	CTRYAG	1 cut(s)	528
BisI	GCNGC	6 cut(s)	27, 49, 99, 288, 602, 828
BlsI	GCNGC	6 cut(s)	28, 50, 100, 289, 603, 829
Bme1390I	CCNGG	4 cut(s)	174, 458, 578, 810
BmrFI	CCNGG	4 cut(s)	174, 458, 578, 810
BmsI	GCATC	3 cut(s)	250, 454, 627
BpuEI	CTTGAG	1 cut(s)	422
BsaBI	GATNNNNATC	2 cut(s)	68, 927
BsaI	GGTCTC	2 cut(s)	168, 875
BsaJI	CCNNGG	5 cut(s)	56, 213, 291, 456, 808
Bsc4I	CCNNNNNNNGG	2 cut(s)	154, 788
Bse1I	ACTGG	1 cut(s)	556
Bse3DI	GCAATG	3 cut(s)	504, 759, 846
Bse8I	GATNNNNATC	2 cut(s)	68, 927
BseBI	CCWGG	4 cut(s)	174, 458, 578, 810
BseDI	CCNNGG	5 cut(s)	56, 213, 291, 456, 808
BseGI	GGATG	5 cut(s)	223, 265, 778, 797, 826
BseJI	GATNNNNATC	2 cut(s)	68, 927
BseLI	CCNNNNNNNGG	2 cut(s)	154, 788
BseMI	GCAATG	3 cut(s)	504, 759, 846
BseMII	CTCAG	1 cut(s)	633
BseNI	ACTGG	1 cut(s)	556
BseXI	GCAGC	3 cut(s)	38, 274, 839
BshFI	GGCC	4 cut(s)	98, 169, 667, 796
BsiHKAI	GWGCWC	1 cut(s)	517
BslFI	GGGAC	3 cut(s)	18, 439, 748
BslI	CCNNNNNNNGG	2 cut(s)	154, 788
BsmAI	GTCTC	5 cut(s)	109, 168, 276, 506, 875
BsmBI	CGTCTC	1 cut(s)	109
BsmFI	GGGAC	3 cut(s)	18, 439, 748
BsmI	GAATGC	2 cut(s)	51, 604
BsnI	GGCC	4 cut(s)	98, 169, 667, 796
Bso31I	GGTCTC	2 cut(s)	168, 875
Bsp1286I	GDGCHC	1 cut(s)	517
Bsp1407I	TGTACA	1 cut(s)	843
Bsp143I	GATC	2 cut(s)	69, 922
Bsp19I	CCATGG	1 cut(s)	213
BspACI	CCGC	4 cut(s)	48, 77, 99, 601
BspANI	GGCC	4 cut(s)	98, 169, 667, 796
BspCNI	CTCAG	1 cut(s)	634
BspTNI	GGTCTC	2 cut(s)	168, 875
BsrDI	GCAATG	3 cut(s)	504, 759, 846
BsrGI	TGTACA	1 cut(s)	843
BsrI	ACTGG	1 cut(s)	556
BssECI	CCNNGG	5 cut(s)	56, 213, 291, 456, 808
BssMI	GATC	2 cut(s)	69, 922
BssSI	CACGAG	1 cut(s)	510
BssT1I	CCWWGG	2 cut(s)	56, 213
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	4 cut(s)	174, 458, 578, 810
Bst4CI	ACNGT	2 cut(s)	127, 193
BstAUI	TGTACA	1 cut(s)	843
BstC8I	GCNNGC	1 cut(s)	713
BstDEI	CTNAG	1 cut(s)	642
BstDSI	CCRYGG	1 cut(s)	213
BstENI	CCTNNNNNAGG	1 cut(s)	786
BstF5I	GGATG	5 cut(s)	223, 265, 778, 797, 826
BstKTI	GATC	2 cut(s)	72, 925
BstMAI	GTCTC	5 cut(s)	109, 168, 276, 506, 875
BstMBI	GATC	2 cut(s)	69, 922
BstMWI	GCNNNNNNNGC	2 cut(s)	98, 287
BstNI	CCWGG	4 cut(s)	174, 458, 578, 810
BstNSI	RCATGY	1 cut(s)	208
BstSCI	CCNGG	4 cut(s)	172, 456, 576, 808
BstSFI	CTRYAG	1 cut(s)	528
BstV1I	GCAGC	3 cut(s)	38, 274, 839
BsuRI	GGCC	4 cut(s)	98, 169, 667, 796
BtgI	CCRYGG	1 cut(s)	213
BtsCI	GGATG	5 cut(s)	223, 265, 778, 797, 826
BtsIMutI	CAGTG	2 cut(s)	123, 189
Cac8I	GCNNGC	1 cut(s)	713
Csp6I	GTAC	2 cut(s)	179, 844
CviAII	CATG	7 cut(s)	43, 73, 205, 214, 388, 609, 877
CviQI	GTAC	2 cut(s)	179, 844
DdeI	CTNAG	1 cut(s)	642
DpnI	GATC	2 cut(s)	71, 924
DpnII	GATC	2 cut(s)	69, 922
EaeI	YGGCCR	1 cut(s)	794
Eco130I	CCWWGG	2 cut(s)	56, 213
Eco147I	AGGCCT	1 cut(s)	667
Eco31I	GGTCTC	2 cut(s)	168, 875
Eco57I	CTGAAG	1 cut(s)	316
EcoNI	CCTNNNNNAGG	1 cut(s)	786
EcoRII	CCWGG	4 cut(s)	172, 456, 576, 808
EcoT14I	CCWWGG	2 cut(s)	56, 213
ErhI	CCWWGG	2 cut(s)	56, 213
Esp3I	CGTCTC	1 cut(s)	109
FaeI	CATG	7 cut(s)	46, 76, 208, 217, 391, 612, 880
FalI	AAGNNNNNCTT	2 cut(s)	655, 687
FaqI	GGGAC	3 cut(s)	18, 439, 748
FatI	CATG	7 cut(s)	42, 72, 204, 213, 387, 608, 876
FbaI	TGATCA	1 cut(s)	69
Fnu4HI	GCNGC	6 cut(s)	27, 49, 99, 288, 602, 828
FokI	GGATG	5 cut(s)	230, 272, 765, 804, 833
Fsp4HI	GCNGC	6 cut(s)	27, 49, 99, 288, 602, 828
FspBI	CTAG	3 cut(s)	498, 900, 937
GluI	GCNGC	6 cut(s)	27, 49, 99, 288, 602, 828
HaeIII	GGCC	4 cut(s)	98, 169, 667, 796
Hin1II	CATG	7 cut(s)	46, 76, 208, 217, 391, 612, 880
HphI	GGTGA	1 cut(s)	79
Hpy166II	GTNNAC	3 cut(s)	130, 179, 210
Hpy188I	TCNGA	3 cut(s)	37, 335, 859
Hpy188III	TCNNGA	4 cut(s)	380, 401, 440, 818
Hpy8I	GTNNAC	3 cut(s)	130, 179, 210
HpyAV	CCTTC	4 cut(s)	158, 410, 437, 740
HpyCH4III	ACNGT	2 cut(s)	127, 193
HpyCH4V	TGCA	4 cut(s)	348, 430, 467, 851
HpyF10VI	GCNNNNNNNGC	2 cut(s)	98, 287
HpyF3I	CTNAG	1 cut(s)	642
Hsp92II	CATG	7 cut(s)	46, 76, 208, 217, 391, 612, 880
Ksp22I	TGATCA	1 cut(s)	69
Kzo9I	GATC	2 cut(s)	69, 922
LmnI	GCTCC	1 cut(s)	520
Lsp1109I	GCAGC	3 cut(s)	38, 274, 839
LweI	GCATC	3 cut(s)	250, 454, 627
MaeI	CTAG	3 cut(s)	498, 900, 937
MaeIII	GTNAC	2 cut(s)	187, 520
MalI	GATC	2 cut(s)	71, 924
MboI	GATC	2 cut(s)	69, 922
MboII	GAAGA	5 cut(s)	21, 73, 322, 473, 489
MhlI	GDGCHC	1 cut(s)	517
MlsI	TGGCCA	1 cut(s)	796
MluCI	AATT	4 cut(s)	266, 354, 702, 852
MluNI	TGGCCA	1 cut(s)	796
MnlI	CCTC	5 cut(s)	180, 286, 678, 735, 817
Mox20I	TGGCCA	1 cut(s)	796
MroXI	GAANNNNTTC	1 cut(s)	907
MscI	TGGCCA	1 cut(s)	796
MseI	TTAA	2 cut(s)	410, 696
MslI	CAYNNNNRTG	4 cut(s)	77, 609, 632, 835
Msp20I	TGGCCA	1 cut(s)	796
MspA1I	CMGCKG	1 cut(s)	601
MspR9I	CCNGG	4 cut(s)	174, 458, 578, 810
Mva1269I	GAATGC	2 cut(s)	51, 604
MvaI	CCWGG	4 cut(s)	174, 458, 578, 810
MwoI	GCNNNNNNNGC	2 cut(s)	98, 287
NcoI	CCATGG	1 cut(s)	213
NdeII	GATC	2 cut(s)	69, 922
NlaIII	CATG	7 cut(s)	46, 76, 208, 217, 391, 612, 880
NmeAIII	GCCGAG	2 cut(s)	145, 316
NmuCI	GTSAC	2 cut(s)	187, 520
NspI	RCATGY	1 cut(s)	208
PceI	AGGCCT	1 cut(s)	667
PciI	ACATGT	1 cut(s)	204
PctI	GAATGC	2 cut(s)	51, 604
PdmI	GAANNNNTTC	1 cut(s)	907
PfoI	TCCNGGA	1 cut(s)	576
PkrI	GCNGC	6 cut(s)	28, 50, 100, 289, 603, 829
PscI	ACATGT	1 cut(s)	204
Psp6I	CCWGG	4 cut(s)	172, 456, 576, 808
PspGI	CCWGG	4 cut(s)	172, 456, 576, 808
RsaI	GTAC	2 cut(s)	180, 845
RsaNI	GTAC	2 cut(s)	179, 844
RseI	CAYNNNNRTG	4 cut(s)	77, 609, 632, 835
SaqAI	TTAA	2 cut(s)	410, 696
SatI	GCNGC	6 cut(s)	27, 49, 99, 288, 602, 828
Sau3AI	GATC	2 cut(s)	69, 922
ScrFI	CCNGG	4 cut(s)	174, 458, 578, 810
SduI	GDGCHC	1 cut(s)	517
SetI	ASST	7 cut(s)	31, 400, 472, 567, 732, 814, 887
SfaNI	GCATC	3 cut(s)	250, 454, 627
SfcI	CTRYAG	1 cut(s)	528
SmiMI	CAYNNNNRTG	4 cut(s)	77, 609, 632, 835
SmlI	CTYRAG	1 cut(s)	401
SmoI	CTYRAG	1 cut(s)	401
Sse9I	AATT	4 cut(s)	266, 354, 702, 852
SseBI	AGGCCT	1 cut(s)	667
SsiI	CCGC	4 cut(s)	48, 77, 99, 601
SspI	AATATT	1 cut(s)	772
SspMI	CTAG	3 cut(s)	498, 900, 937
StuI	AGGCCT	1 cut(s)	667
StyD4I	CCNGG	4 cut(s)	172, 456, 576, 808
StyI	CCWWGG	2 cut(s)	56, 213
TaaI	ACNGT	2 cut(s)	127, 193
TaqII	GACCGA	2 cut(s)	21, 150
TasI	AATT	4 cut(s)	266, 354, 702, 852
TatI	WGTACW	1 cut(s)	843
TauI	GCSGC	3 cut(s)	51, 101, 604
Tru1I	TTAA	2 cut(s)	410, 696
Tru9I	TTAA	2 cut(s)	410, 696
TscAI	CASTG	2 cut(s)	130, 196
TseFI	GTSAC	2 cut(s)	187, 520
TseI	GCWGC	3 cut(s)	26, 287, 827
Tsp45I	GTSAC	2 cut(s)	187, 520
TspDTI	ATGAA	1 cut(s)	597
TspGWI	ACGGA	1 cut(s)	272
TspRI	CASTG	2 cut(s)	130, 196
XagI	CCTNNNNNAGG	1 cut(s)	786
XceI	RCATGY	1 cut(s)	208
XmnI	GAANNNNTTC	1 cut(s)	907
XspI	CTAG	3 cut(s)	498, 900, 937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.