No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g04841 |
| malus_domestica | MD02G1047700.v1.1 MD15G1186200.v1.1 |
| prunus_persica | Prupe.3G070100_v2.0.a1 Prupe.7G230500_v2.0.a1 |
| pyrus_communis | pycom02g03990 pycom09g12930 pycom15g16690 |
| rosa_chinensis | RchiOBHm_Chr2g0090511 |
| rosa_roxburghii | Rroxscaffold_2G00151070 |
| rosa_rugosa | Rorug02G0008700 Rorug02G0349200 |
| rosa_samantha | Rh2BG410600 Rh2DG417800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 22 |
| AcsI | RAATTY | 1 cut(s) | 92 |
| AcuI | CTGAAG | 1 cut(s) | 183 |
| AgsI | TTSAA | 1 cut(s) | 112 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 233, 265 |
| AluBI | AGCT | 4 cut(s) | 22, 71, 194, 229 |
| AluI | AGCT | 4 cut(s) | 22, 71, 194, 229 |
| Alw26I | GTCTC | 1 cut(s) | 208 |
| AlwI | GGATC | 1 cut(s) | 22 |
| ApeKI | GCWGC | 2 cut(s) | 19, 194 |
| ApoI | RAATTY | 1 cut(s) | 92 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 30, 62, 137, 169 |
| AsuHPI | GGTGA | 5 cut(s) | 25, 33, 40, 65, 132 |
| BbvI | GCAGC | 2 cut(s) | 31, 181 |
| BcoDI | GTCTC | 1 cut(s) | 208 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BfmI | CTRYAG | 1 cut(s) | 220 |
| BisI | GCNGC | 2 cut(s) | 20, 195 |
| BlsI | GCNGC | 2 cut(s) | 21, 196 |
| BpmI | CTGGAG | 1 cut(s) | 30 |
| BsaJI | CCNNGG | 1 cut(s) | 149 |
| Bse1I | ACTGG | 1 cut(s) | 44 |
| BseDI | CCNNGG | 1 cut(s) | 149 |
| BseMII | CTCAG | 2 cut(s) | 102, 251 |
| BseNI | ACTGG | 1 cut(s) | 44 |
| BseXI | GCAGC | 2 cut(s) | 31, 181 |
| Bsh1285I | CGRYCG | 1 cut(s) | 283 |
| BsiEI | CGRYCG | 1 cut(s) | 283 |
| BsmAI | GTCTC | 1 cut(s) | 208 |
| Bsp143I | GATC | 2 cut(s) | 27, 280 |
| Bsp19I | CCATGG | 1 cut(s) | 149 |
| BspCNI | CTCAG | 2 cut(s) | 101, 250 |
| BspPI | GGATC | 1 cut(s) | 22 |
| BspQI | GCTCTTC | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 44 |
| BssECI | CCNNGG | 1 cut(s) | 149 |
| BssMI | GATC | 2 cut(s) | 27, 280 |
| BssT1I | CCWWGG | 1 cut(s) | 149 |
| Bst4CI | ACNGT | 1 cut(s) | 224 |
| Bst6I | CTCTTC | 1 cut(s) | 131 |
| BstC8I | GCNNGC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 88, 237 |
| BstDSI | CCRYGG | 1 cut(s) | 149 |
| BstKTI | GATC | 2 cut(s) | 30, 283 |
| BstMAI | GTCTC | 1 cut(s) | 208 |
| BstMBI | GATC | 2 cut(s) | 27, 280 |
| BstMCI | CGRYCG | 1 cut(s) | 283 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 130 |
| BstSFI | CTRYAG | 1 cut(s) | 220 |
| BstV1I | GCAGC | 2 cut(s) | 31, 181 |
| BstX2I | RGATCY | 1 cut(s) | 27 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 150 |
| BstYI | RGATCY | 1 cut(s) | 27 |
| BtgI | CCRYGG | 1 cut(s) | 149 |
| BtsIMutI | CAGTG | 2 cut(s) | 155, 229 |
| Cac8I | GCNNGC | 1 cut(s) | 192 |
| CviAII | CATG | 2 cut(s) | 150, 269 |
| CviJI | RGCY | 7 cut(s) | 22, 71, 148, 166, 190, 194, 229 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 71, 148, 166, 190, 194, 229 |
| DdeI | CTNAG | 2 cut(s) | 88, 237 |
| DpnI | GATC | 2 cut(s) | 29, 282 |
| DpnII | GATC | 2 cut(s) | 27, 280 |
| Eam1104I | CTCTTC | 1 cut(s) | 131 |
| EarI | CTCTTC | 1 cut(s) | 131 |
| Eco130I | CCWWGG | 1 cut(s) | 149 |
| Eco57I | CTGAAG | 1 cut(s) | 183 |
| EcoT14I | CCWWGG | 1 cut(s) | 149 |
| ErhI | CCWWGG | 1 cut(s) | 149 |
| FaeI | CATG | 2 cut(s) | 153, 272 |
| FaiI | YATR | 2 cut(s) | 151, 270 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 104, 136 |
| FatI | CATG | 2 cut(s) | 149, 268 |
| Fnu4HI | GCNGC | 2 cut(s) | 20, 195 |
| Fsp4HI | GCNGC | 2 cut(s) | 20, 195 |
| FspBI | CTAG | 1 cut(s) | 23 |
| GluI | GCNGC | 2 cut(s) | 20, 195 |
| GsuI | CTGGAG | 1 cut(s) | 30 |
| Hin1II | CATG | 2 cut(s) | 153, 272 |
| HphI | GGTGA | 5 cut(s) | 25, 33, 40, 65, 132 |
| Hpy188I | TCNGA | 2 cut(s) | 91, 240 |
| Hpy188III | TCNNGA | 2 cut(s) | 284, 319 |
| HpyAV | CCTTC | 1 cut(s) | 127 |
| HpyCH4III | ACNGT | 1 cut(s) | 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 130 |
| HpyF3I | CTNAG | 2 cut(s) | 88, 237 |
| Hsp92II | CATG | 2 cut(s) | 153, 272 |
| Kzo9I | GATC | 2 cut(s) | 27, 280 |
| LguI | GCTCTTC | 1 cut(s) | 131 |
| LpnPI | CCDG | 3 cut(s) | 57, 89, 204 |
| Lsp1109I | GCAGC | 2 cut(s) | 31, 181 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MaeIII | GTNAC | 2 cut(s) | 46, 153 |
| MalI | GATC | 2 cut(s) | 29, 282 |
| MboI | GATC | 2 cut(s) | 27, 280 |
| MboII | GAAGA | 1 cut(s) | 118 |
| MflI | RGATCY | 1 cut(s) | 27 |
| MluCI | AATT | 3 cut(s) | 92, 180, 272 |
| MnlI | CCTC | 4 cut(s) | 41, 156, 246, 317 |
| MseI | TTAA | 1 cut(s) | 102 |
| MspA1I | CMGCKG | 1 cut(s) | 194 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 130 |
| NcoI | CCATGG | 1 cut(s) | 149 |
| NdeII | GATC | 2 cut(s) | 27, 280 |
| NlaIII | CATG | 2 cut(s) | 153, 272 |
| NmuCI | GTSAC | 2 cut(s) | 46, 153 |
| PciSI | GCTCTTC | 1 cut(s) | 131 |
| PkrI | GCNGC | 2 cut(s) | 21, 196 |
| Ple19I | CGATCG | 1 cut(s) | 283 |
| PsuI | RGATCY | 1 cut(s) | 27 |
| PvuI | CGATCG | 1 cut(s) | 283 |
| PvuII | CAGCTG | 1 cut(s) | 194 |
| SapI | GCTCTTC | 1 cut(s) | 131 |
| SaqAI | TTAA | 1 cut(s) | 102 |
| SatI | GCNGC | 2 cut(s) | 20, 195 |
| Sau3AI | GATC | 2 cut(s) | 27, 280 |
| SetI | ASST | 6 cut(s) | 24, 73, 78, 196, 212, 231 |
| SfcI | CTRYAG | 1 cut(s) | 220 |
| SmlI | CTYRAG | 1 cut(s) | 319 |
| SmoI | CTYRAG | 1 cut(s) | 319 |
| Sse9I | AATT | 3 cut(s) | 92, 180, 272 |
| SspMI | CTAG | 1 cut(s) | 23 |
| StyI | CCWWGG | 1 cut(s) | 149 |
| TaaI | ACNGT | 1 cut(s) | 224 |
| TaqI | TCGA | 3 cut(s) | 265, 279, 283 |
| TasI | AATT | 3 cut(s) | 92, 180, 272 |
| Tru1I | TTAA | 1 cut(s) | 102 |
| Tru9I | TTAA | 1 cut(s) | 102 |
| TscAI | CASTG | 2 cut(s) | 162, 229 |
| TseFI | GTSAC | 2 cut(s) | 46, 153 |
| TseI | GCWGC | 2 cut(s) | 19, 194 |
| Tsp45I | GTSAC | 2 cut(s) | 46, 153 |
| TspDTI | ATGAA | 3 cut(s) | 73, 86, 285 |
| TspRI | CASTG | 2 cut(s) | 162, 229 |
| XapI | RAATTY | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 23 |