Trafficking protein particle complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58030 |
| fragaria_vesca | FvH4_1g01170 FvH4_1g01170 |
| malus_domestica | MD02G1009800.v1.1 |
| prunus_persica | Prupe.7G260200_v2.0.a1 Prupe.7G260200_v2.0.a1 |
| pyrus_communis | pycom02g00850 pycom15g13890 |
| rosa_chinensis | RchiOBHm_Chr2g0085961 |
| rosa_laevigata | RLG00000015730 |
| rosa_multiflora | Rmu_ssc0000355.1_g000026 |
| rosa_roxburghii | Rroxscaffold_2G00154890 |
| rosa_rugosa | Rorug01G0464700 |
| rosa_samantha | Rh2AG013900 |
| rosa_wichuraiana | Rw2G001230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 542 |
| AcuI | CTGAAG | 1 cut(s) | 570 |
| AdeI | CACNNNGTG | 1 cut(s) | 282 |
| AfaI | GTAC | 5 cut(s) | 29, 119, 347, 498, 558 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 58, 130, 506 |
| AluBI | AGCT | 5 cut(s) | 109, 205, 367, 476, 488 |
| AluI | AGCT | 5 cut(s) | 109, 205, 367, 476, 488 |
| Alw21I | GWGCWC | 1 cut(s) | 369 |
| Alw26I | GTCTC | 1 cut(s) | 233 |
| Ama87I | CYCGRG | 1 cut(s) | 192 |
| AoxI | GGCC | 1 cut(s) | 518 |
| ApoI | RAATTY | 1 cut(s) | 542 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 57, 89 |
| AvaI | CYCGRG | 1 cut(s) | 192 |
| BanII | GRGCYC | 2 cut(s) | 193, 369 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 543, 575 |
| Bbv12I | GWGCWC | 1 cut(s) | 369 |
| BbvCI | CCTCAGC | 1 cut(s) | 53 |
| BceAI | ACGGC | 1 cut(s) | 533 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 503, 537 |
| BciVI | GTATCC | 1 cut(s) | 266 |
| BcoDI | GTCTC | 1 cut(s) | 233 |
| BfmI | CTRYAG | 1 cut(s) | 477 |
| BfuI | GTATCC | 1 cut(s) | 266 |
| BmcAI | AGTACT | 1 cut(s) | 29 |
| BmeT110I | CYCGRG | 1 cut(s) | 192 |
| BmiI | GGNNCC | 1 cut(s) | 409 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BpmI | CTGGAG | 2 cut(s) | 185, 221 |
| Bpu10I | CCTNAGC | 1 cut(s) | 53 |
| BpuEI | CTTGAG | 1 cut(s) | 338 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 230, 260, 414, 444 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 58, 130, 506 |
| Bse1I | ACTGG | 1 cut(s) | 500 |
| Bse3DI | GCAATG | 1 cut(s) | 141 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 58, 130, 506 |
| BseMI | GCAATG | 1 cut(s) | 141 |
| BseMII | CTCAG | 1 cut(s) | 67 |
| BseNI | ACTGG | 1 cut(s) | 500 |
| BsgI | GTGCAG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 520 |
| BsiHKAI | GWGCWC | 1 cut(s) | 369 |
| BsiHKCI | CYCGRG | 1 cut(s) | 192 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 58, 130, 506 |
| BsmAI | GTCTC | 1 cut(s) | 233 |
| BsmI | GAATGC | 1 cut(s) | 92 |
| BsnI | GGCC | 1 cut(s) | 520 |
| BsoBI | CYCGRG | 1 cut(s) | 192 |
| Bsp1286I | GDGCHC | 2 cut(s) | 193, 369 |
| Bsp143I | GATC | 1 cut(s) | 18 |
| BspANI | GGCC | 1 cut(s) | 520 |
| BspCNI | CTCAG | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 409 |
| BsrDI | GCAATG | 1 cut(s) | 141 |
| BsrI | ACTGG | 1 cut(s) | 500 |
| BssMI | GATC | 1 cut(s) | 18 |
| Bst4CI | ACNGT | 2 cut(s) | 280, 461 |
| Bst6I | CTCTTC | 2 cut(s) | 546, 559 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 179, 431 |
| BstDEI | CTNAG | 1 cut(s) | 53 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 56 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstKTI | GATC | 1 cut(s) | 21 |
| BstMAI | GTCTC | 1 cut(s) | 233 |
| BstMBI | GATC | 1 cut(s) | 18 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 179, 188, 431 |
| BstSFI | CTRYAG | 1 cut(s) | 477 |
| BsuI | GTATCC | 1 cut(s) | 266 |
| BsuRI | GGCC | 1 cut(s) | 520 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtsIMutI | CAGTG | 3 cut(s) | 276, 327, 507 |
| Csp6I | GTAC | 5 cut(s) | 28, 118, 346, 497, 557 |
| CviAII | CATG | 3 cut(s) | 335, 349, 403 |
| CviJI | RGCY | 9 cut(s) | 109, 163, 191, 205, 308, 367, 476, 488, 520 |
| CviKI_1 | RGCY | 9 cut(s) | 109, 163, 191, 205, 308, 367, 476, 488, 520 |
| CviQI | GTAC | 5 cut(s) | 28, 118, 346, 497, 557 |
| DdeI | CTNAG | 1 cut(s) | 53 |
| DpnI | GATC | 1 cut(s) | 20 |
| DpnII | GATC | 1 cut(s) | 18 |
| DraIII | CACNNNGTG | 1 cut(s) | 282 |
| Eam1104I | CTCTTC | 2 cut(s) | 546, 559 |
| EarI | CTCTTC | 2 cut(s) | 546, 559 |
| Ecl136II | GAGCTC | 1 cut(s) | 367 |
| Eco24I | GRGCYC | 2 cut(s) | 193, 369 |
| Eco53kI | GAGCTC | 1 cut(s) | 367 |
| Eco57I | CTGAAG | 1 cut(s) | 570 |
| Eco88I | CYCGRG | 1 cut(s) | 192 |
| EcoICRI | GAGCTC | 1 cut(s) | 367 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 56 |
| EcoT38I | GRGCYC | 2 cut(s) | 193, 369 |
| FaeI | CATG | 3 cut(s) | 338, 352, 406 |
| FaiI | YATR | 6 cut(s) | 180, 216, 273, 336, 350, 404 |
| FatI | CATG | 3 cut(s) | 334, 348, 402 |
| FokI | GGATG | 1 cut(s) | 182 |
| FriOI | GRGCYC | 2 cut(s) | 193, 369 |
| GsuI | CTGGAG | 2 cut(s) | 185, 221 |
| HaeIII | GGCC | 1 cut(s) | 520 |
| Hin1II | CATG | 3 cut(s) | 338, 352, 406 |
| HincII | GTYRAC | 1 cut(s) | 136 |
| HindII | GTYRAC | 1 cut(s) | 136 |
| HinfI | GANTC | 2 cut(s) | 311, 391 |
| Hpy166II | GTNNAC | 2 cut(s) | 136, 376 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 1 cut(s) | 200 |
| Hpy8I | GTNNAC | 2 cut(s) | 136, 376 |
| HpyAV | CCTTC | 4 cut(s) | 153, 228, 280, 355 |
| HpyCH4III | ACNGT | 2 cut(s) | 280, 461 |
| HpyCH4V | TGCA | 4 cut(s) | 92, 115, 173, 271 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 179, 188, 431 |
| HpyF3I | CTNAG | 1 cut(s) | 53 |
| Hsp92II | CATG | 3 cut(s) | 338, 352, 406 |
| Kzo9I | GATC | 1 cut(s) | 18 |
| LmnI | GCTCC | 5 cut(s) | 106, 202, 364, 372, 422 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeIII | GTNAC | 1 cut(s) | 481 |
| MalI | GATC | 1 cut(s) | 20 |
| MboI | GATC | 1 cut(s) | 18 |
| MboII | GAAGA | 4 cut(s) | 28, 350, 563, 576 |
| MhlI | GDGCHC | 2 cut(s) | 193, 369 |
| MluCI | AATT | 3 cut(s) | 415, 438, 542 |
| MnlI | CCTC | 7 cut(s) | 50, 62, 64, 160, 499, 531, 547 |
| MseI | TTAA | 1 cut(s) | 414 |
| MslI | CAYNNNNRTG | 1 cut(s) | 339 |
| MspA1I | CMGCKG | 1 cut(s) | 476 |
| Mva1269I | GAATGC | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 179, 188, 431 |
| NdeII | GATC | 1 cut(s) | 18 |
| NlaIII | CATG | 3 cut(s) | 338, 352, 406 |
| NlaIV | GGNNCC | 1 cut(s) | 409 |
| NmeAIII | GCCGAG | 1 cut(s) | 172 |
| PaeR7I | CTCGAG | 1 cut(s) | 192 |
| PctI | GAATGC | 1 cut(s) | 92 |
| PfeI | GAWTC | 2 cut(s) | 311, 391 |
| Psp124BI | GAGCTC | 1 cut(s) | 369 |
| PspN4I | GGNNCC | 1 cut(s) | 409 |
| PspXI | VCTCGAGB | 1 cut(s) | 192 |
| PvuII | CAGCTG | 1 cut(s) | 476 |
| RsaI | GTAC | 5 cut(s) | 29, 119, 347, 498, 558 |
| RsaNI | GTAC | 5 cut(s) | 28, 118, 346, 497, 557 |
| RseI | CAYNNNNRTG | 1 cut(s) | 339 |
| SacI | GAGCTC | 1 cut(s) | 369 |
| SaqAI | TTAA | 1 cut(s) | 414 |
| Sau3AI | GATC | 1 cut(s) | 18 |
| ScaI | AGTACT | 1 cut(s) | 29 |
| SduI | GDGCHC | 2 cut(s) | 193, 369 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SfcI | CTRYAG | 1 cut(s) | 477 |
| Sfr274I | CTCGAG | 1 cut(s) | 192 |
| SlaI | CTCGAG | 1 cut(s) | 192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 339 |
| SmlI | CTYRAG | 2 cut(s) | 192, 317 |
| SmoI | CTYRAG | 2 cut(s) | 192, 317 |
| Sse9I | AATT | 3 cut(s) | 415, 438, 542 |
| SstI | GAGCTC | 1 cut(s) | 369 |
| TaaI | ACNGT | 2 cut(s) | 280, 461 |
| TaqI | TCGA | 4 cut(s) | 42, 193, 389, 523 |
| TasI | AATT | 3 cut(s) | 415, 438, 542 |
| TatI | WGTACW | 3 cut(s) | 27, 117, 345 |
| TfiI | GAWTC | 2 cut(s) | 311, 391 |
| Tru1I | TTAA | 1 cut(s) | 414 |
| Tru9I | TTAA | 1 cut(s) | 414 |
| TscAI | CASTG | 3 cut(s) | 283, 334, 507 |
| TspDTI | ATGAA | 1 cut(s) | 351 |
| TspRI | CASTG | 3 cut(s) | 283, 334, 507 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 56 |
| XapI | RAATTY | 1 cut(s) | 542 |
| XhoI | CTCGAG | 1 cut(s) | 192 |
| ZrmI | AGTACT | 1 cut(s) | 29 |