proteasome assembly
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.2G081400_v2.0.a1 Prupe.2G081800_v2.0.a1 Prupe.3G128000_v2.0.a1 Prupe.7G035200_v2.0.a1 Prupe.8G010100_v2.0.a1 Prupe.8G029500_v2.0.a1 Prupe.8G055900_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AdeI | CACNNNGTG | 1 cut(s) | 134 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 317 |
| AjnI | CCWGG | 1 cut(s) | 83 |
| AluBI | AGCT | 1 cut(s) | 181 |
| AluI | AGCT | 1 cut(s) | 181 |
| Alw26I | GTCTC | 1 cut(s) | 262 |
| AoxI | GGCC | 1 cut(s) | 81 |
| BbsI | GAAGAC | 3 cut(s) | 227, 238, 269 |
| BccI | CCATC | 1 cut(s) | 97 |
| BciT130I | CCWGG | 1 cut(s) | 85 |
| BclI | TGATCA | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 262 |
| BfaI | CTAG | 2 cut(s) | 170, 330 |
| Bme1390I | CCNGG | 1 cut(s) | 85 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 317 |
| BmrFI | CCNGG | 1 cut(s) | 85 |
| BmsI | GCATC | 2 cut(s) | 101, 195 |
| BpiI | GAAGAC | 3 cut(s) | 227, 238, 269 |
| Bse3DI | GCAATG | 1 cut(s) | 291 |
| BseBI | CCWGG | 1 cut(s) | 85 |
| BseMI | GCAATG | 1 cut(s) | 291 |
| BseYI | CCCAGC | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 83 |
| BsmAI | GTCTC | 1 cut(s) | 262 |
| BsmBI | CGTCTC | 1 cut(s) | 262 |
| BsnI | GGCC | 1 cut(s) | 83 |
| Bsp143I | GATC | 1 cut(s) | 150 |
| BspANI | GGCC | 1 cut(s) | 83 |
| BsrDI | GCAATG | 1 cut(s) | 291 |
| BssMI | GATC | 1 cut(s) | 150 |
| Bst2UI | CCWGG | 1 cut(s) | 85 |
| Bst4CI | ACNGT | 2 cut(s) | 217, 315 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 298 |
| BstDEI | CTNAG | 1 cut(s) | 131 |
| BstKTI | GATC | 1 cut(s) | 153 |
| BstMAI | GTCTC | 1 cut(s) | 262 |
| BstMBI | GATC | 1 cut(s) | 150 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 293 |
| BstNI | CCWGG | 1 cut(s) | 85 |
| BstSCI | CCNGG | 1 cut(s) | 83 |
| BstV2I | GAAGAC | 3 cut(s) | 227, 238, 269 |
| BsuRI | GGCC | 1 cut(s) | 83 |
| BtsIMutI | CAGTG | 1 cut(s) | 213 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 298 |
| CseI | GACGC | 1 cut(s) | 322 |
| CviAII | CATG | 1 cut(s) | 44 |
| CviJI | RGCY | 5 cut(s) | 83, 88, 147, 169, 181 |
| CviKI_1 | RGCY | 5 cut(s) | 83, 88, 147, 169, 181 |
| DdeI | CTNAG | 1 cut(s) | 131 |
| DpnI | GATC | 1 cut(s) | 152 |
| DpnII | GATC | 1 cut(s) | 150 |
| DraIII | CACNNNGTG | 1 cut(s) | 134 |
| DriI | GACNNNNNGTC | 1 cut(s) | 317 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 317 |
| EcoRII | CCWGG | 1 cut(s) | 83 |
| Esp3I | CGTCTC | 1 cut(s) | 262 |
| FaeI | CATG | 1 cut(s) | 47 |
| FaiI | YATR | 4 cut(s) | 13, 45, 197, 221 |
| FatI | CATG | 1 cut(s) | 43 |
| FbaI | TGATCA | 1 cut(s) | 150 |
| FspBI | CTAG | 2 cut(s) | 170, 330 |
| GsaI | CCCAGC | 1 cut(s) | 23 |
| HaeIII | GGCC | 1 cut(s) | 83 |
| HgaI | GACGC | 1 cut(s) | 322 |
| Hin1II | CATG | 1 cut(s) | 47 |
| HincII | GTYRAC | 1 cut(s) | 175 |
| HindII | GTYRAC | 1 cut(s) | 175 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| HinfI | GANTC | 1 cut(s) | 32 |
| Hpy166II | GTNNAC | 2 cut(s) | 175, 193 |
| Hpy188I | TCNGA | 3 cut(s) | 124, 262, 341 |
| Hpy8I | GTNNAC | 2 cut(s) | 175, 193 |
| Hpy99I | CGWCG | 3 cut(s) | 257, 315, 338 |
| HpyAV | CCTTC | 2 cut(s) | 74, 159 |
| HpyCH4III | ACNGT | 2 cut(s) | 217, 315 |
| HpyCH4V | TGCA | 2 cut(s) | 92, 296 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 293 |
| HpyF3I | CTNAG | 1 cut(s) | 131 |
| Hsp92II | CATG | 1 cut(s) | 47 |
| Ksp22I | TGATCA | 1 cut(s) | 150 |
| Kzo9I | GATC | 1 cut(s) | 150 |
| LpnPI | CCDG | 4 cut(s) | 33, 70, 97, 129 |
| LweI | GCATC | 2 cut(s) | 101, 195 |
| MaeI | CTAG | 2 cut(s) | 170, 330 |
| MalI | GATC | 1 cut(s) | 152 |
| MboI | GATC | 1 cut(s) | 150 |
| MboII | GAAGA | 5 cut(s) | 176, 227, 238, 241, 269 |
| MnlI | CCTC | 3 cut(s) | 73, 249, 291 |
| MseI | TTAA | 1 cut(s) | 267 |
| MspR9I | CCNGG | 1 cut(s) | 85 |
| MvaI | CCWGG | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 293 |
| NdeII | GATC | 1 cut(s) | 150 |
| NlaIII | CATG | 1 cut(s) | 47 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 249 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| Psp6I | CCWGG | 1 cut(s) | 83 |
| PspFI | CCCAGC | 1 cut(s) | 19 |
| PspGI | CCWGG | 1 cut(s) | 83 |
| SaqAI | TTAA | 1 cut(s) | 267 |
| Sau3AI | GATC | 1 cut(s) | 150 |
| ScrFI | CCNGG | 1 cut(s) | 85 |
| SetI | ASST | 1 cut(s) | 183 |
| SfaNI | GCATC | 2 cut(s) | 101, 195 |
| SspMI | CTAG | 2 cut(s) | 170, 330 |
| StyD4I | CCNGG | 1 cut(s) | 83 |
| TaaI | ACNGT | 2 cut(s) | 217, 315 |
| TaqI | TCGA | 2 cut(s) | 35, 67 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| Tru1I | TTAA | 1 cut(s) | 267 |
| Tru9I | TTAA | 1 cut(s) | 267 |
| TscAI | CASTG | 1 cut(s) | 220 |
| TspDTI | ATGAA | 1 cut(s) | 280 |
| TspRI | CASTG | 1 cut(s) | 220 |
| XspI | CTAG | 2 cut(s) | 170, 330 |