proteasome assembly
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.2G081400_v2.0.a1 Prupe.2G081800_v2.0.a1 Prupe.3G128000_v2.0.a1 Prupe.7G035200_v2.0.a1 Prupe.8G010100_v2.0.a1 Prupe.8G029500_v2.0.a1 Prupe.8G055900_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 41 |
| AcoI | YGGCCR | 1 cut(s) | 417 |
| AcsI | RAATTY | 1 cut(s) | 9 |
| AdeI | CACNNNGTG | 1 cut(s) | 209 |
| AgsI | TTSAA | 3 cut(s) | 287, 394, 488 |
| AjnI | CCWGG | 1 cut(s) | 158 |
| AluBI | AGCT | 1 cut(s) | 339 |
| AluI | AGCT | 1 cut(s) | 339 |
| Alw26I | GTCTC | 1 cut(s) | 81 |
| AoxI | GGCC | 2 cut(s) | 156, 417 |
| ApoI | RAATTY | 1 cut(s) | 9 |
| BalI | TGGCCA | 1 cut(s) | 419 |
| BbsI | GAAGAC | 3 cut(s) | 251, 262, 495 |
| BccI | CCATC | 1 cut(s) | 172 |
| BciT130I | CCWGG | 1 cut(s) | 160 |
| BclI | TGATCA | 1 cut(s) | 225 |
| BcoDI | GTCTC | 1 cut(s) | 81 |
| Bme1390I | CCNGG | 1 cut(s) | 160 |
| BmrFI | CCNGG | 1 cut(s) | 160 |
| BmsI | GCATC | 1 cut(s) | 176 |
| BpiI | GAAGAC | 3 cut(s) | 251, 262, 495 |
| Bsa29I | ATCGAT | 1 cut(s) | 298 |
| BsaAI | YACGTR | 1 cut(s) | 23 |
| Bse3DI | GCAATG | 1 cut(s) | 319 |
| BseBI | CCWGG | 1 cut(s) | 160 |
| BseCI | ATCGAT | 1 cut(s) | 298 |
| BseGI | GGATG | 1 cut(s) | 36 |
| BseMI | GCAATG | 1 cut(s) | 319 |
| BseMII | CTCAG | 1 cut(s) | 114 |
| BshFI | GGCC | 2 cut(s) | 158, 419 |
| BshVI | ATCGAT | 1 cut(s) | 298 |
| BsmAI | GTCTC | 1 cut(s) | 81 |
| BsnI | GGCC | 2 cut(s) | 158, 419 |
| Bsp143I | GATC | 2 cut(s) | 225, 299 |
| BspACI | CCGC | 1 cut(s) | 41 |
| BspANI | GGCC | 2 cut(s) | 158, 419 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspDI | ATCGAT | 1 cut(s) | 298 |
| BsrDI | GCAATG | 1 cut(s) | 319 |
| BssMI | GATC | 2 cut(s) | 225, 299 |
| Bst2UI | CCWGG | 1 cut(s) | 160 |
| Bst4CI | ACNGT | 1 cut(s) | 365 |
| BstBAI | YACGTR | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 3 cut(s) | 165, 326, 373 |
| BstDEI | CTNAG | 2 cut(s) | 123, 206 |
| BstF5I | GGATG | 1 cut(s) | 36 |
| BstKTI | GATC | 2 cut(s) | 228, 302 |
| BstMAI | GTCTC | 1 cut(s) | 81 |
| BstMBI | GATC | 2 cut(s) | 225, 299 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 321 |
| BstNI | CCWGG | 1 cut(s) | 160 |
| BstNSI | RCATGY | 1 cut(s) | 375 |
| BstSCI | CCNGG | 1 cut(s) | 158 |
| BstV2I | GAAGAC | 3 cut(s) | 251, 262, 495 |
| Bsu15I | ATCGAT | 1 cut(s) | 298 |
| BsuRI | GGCC | 2 cut(s) | 158, 419 |
| BsuTUI | ATCGAT | 1 cut(s) | 298 |
| BtsCI | GGATG | 1 cut(s) | 36 |
| Cac8I | GCNNGC | 3 cut(s) | 165, 326, 373 |
| ClaI | ATCGAT | 1 cut(s) | 298 |
| CviAII | CATG | 1 cut(s) | 372 |
| CviJI | RGCY | 5 cut(s) | 158, 163, 222, 339, 419 |
| CviKI_1 | RGCY | 5 cut(s) | 158, 163, 222, 339, 419 |
| DdeI | CTNAG | 2 cut(s) | 123, 206 |
| DpnI | GATC | 2 cut(s) | 227, 301 |
| DpnII | GATC | 2 cut(s) | 225, 299 |
| DraIII | CACNNNGTG | 1 cut(s) | 209 |
| EaeI | YGGCCR | 1 cut(s) | 417 |
| EcoRII | CCWGG | 1 cut(s) | 158 |
| FaeI | CATG | 1 cut(s) | 375 |
| FaiI | YATR | 4 cut(s) | 26, 373, 379, 457 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 323, 355 |
| FatI | CATG | 1 cut(s) | 371 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FbaI | TGATCA | 1 cut(s) | 225 |
| FokI | GGATG | 1 cut(s) | 23 |
| HaeIII | GGCC | 2 cut(s) | 158, 419 |
| Hin1II | CATG | 1 cut(s) | 375 |
| HindIII | AAGCTT | 1 cut(s) | 337 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 199, 245 |
| Hpy99I | CGWCG | 1 cut(s) | 281 |
| HpyAV | CCTTC | 1 cut(s) | 149 |
| HpyCH4III | ACNGT | 1 cut(s) | 365 |
| HpyCH4IV | ACGT | 3 cut(s) | 17, 22, 381 |
| HpyCH4V | TGCA | 4 cut(s) | 78, 167, 324, 371 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 321 |
| HpyF3I | CTNAG | 2 cut(s) | 123, 206 |
| HpySE526I | ACGT | 3 cut(s) | 17, 22, 381 |
| Hsp92II | CATG | 1 cut(s) | 375 |
| Ksp22I | TGATCA | 1 cut(s) | 225 |
| Kzo9I | GATC | 2 cut(s) | 225, 299 |
| LpnPI | CCDG | 5 cut(s) | 135, 145, 172, 204, 401 |
| LweI | GCATC | 1 cut(s) | 176 |
| MaeII | ACGT | 3 cut(s) | 17, 22, 381 |
| MaeIII | GTNAC | 2 cut(s) | 18, 359 |
| MalI | GATC | 2 cut(s) | 227, 301 |
| MboI | GATC | 2 cut(s) | 225, 299 |
| MboII | GAAGA | 5 cut(s) | 251, 262, 265, 297, 500 |
| MlsI | TGGCCA | 1 cut(s) | 419 |
| MluCI | AATT | 2 cut(s) | 9, 91 |
| MluNI | TGGCCA | 1 cut(s) | 419 |
| MmeI | TCCRAC | 2 cut(s) | 38, 504 |
| MnlI | CCTC | 3 cut(s) | 148, 273, 461 |
| Mox20I | TGGCCA | 1 cut(s) | 419 |
| MscI | TGGCCA | 1 cut(s) | 419 |
| MseI | TTAA | 1 cut(s) | 291 |
| Msp20I | TGGCCA | 1 cut(s) | 419 |
| MspR9I | CCNGG | 1 cut(s) | 160 |
| MvaI | CCWGG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 321 |
| NdeII | GATC | 2 cut(s) | 225, 299 |
| NlaIII | CATG | 1 cut(s) | 375 |
| NmuCI | GTSAC | 1 cut(s) | 18 |
| NspI | RCATGY | 1 cut(s) | 375 |
| PaeI | GCATGC | 1 cut(s) | 375 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 273 |
| Ppu21I | YACGTR | 1 cut(s) | 23 |
| Psp6I | CCWGG | 1 cut(s) | 158 |
| PspGI | CCWGG | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 291 |
| Sau3AI | GATC | 2 cut(s) | 225, 299 |
| ScrFI | CCNGG | 1 cut(s) | 160 |
| SetI | ASST | 7 cut(s) | 20, 25, 336, 341, 384, 410, 501 |
| SfaNI | GCATC | 1 cut(s) | 176 |
| SphI | GCATGC | 1 cut(s) | 375 |
| Sse9I | AATT | 2 cut(s) | 9, 91 |
| SsiI | CCGC | 1 cut(s) | 41 |
| StyD4I | CCNGG | 1 cut(s) | 158 |
| TaaI | ACNGT | 1 cut(s) | 365 |
| TaiI | ACGT | 3 cut(s) | 20, 25, 384 |
| TaqI | TCGA | 2 cut(s) | 142, 298 |
| TasI | AATT | 2 cut(s) | 9, 91 |
| Tru1I | TTAA | 1 cut(s) | 291 |
| Tru9I | TTAA | 1 cut(s) | 291 |
| TseFI | GTSAC | 1 cut(s) | 18 |
| Tsp45I | GTSAC | 1 cut(s) | 18 |
| TspDTI | ATGAA | 2 cut(s) | 308, 332 |
| XapI | RAATTY | 1 cut(s) | 9 |
| XceI | RCATGY | 1 cut(s) | 375 |