Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g07760 |
| malus_domestica | MD10G1084100.v1.1 |
| prunus_persica | Prupe.8G107400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0262091 RchiOBHm_Chr6g0271961 |
| rosa_laevigata | RLG00000014452 |
| rosa_multiflora | Rmu_sc0002510.1_g000009 Rmu_ssc0000125.1_g000022 |
| rosa_roxburghii | Rroxscaffold_7G00207830 |
| rosa_rugosa | Rorug05G0595200 |
| rosa_samantha | Rh6AG115100 Rh6BG109100 Rh6CG106500 Rh6DG097000 |
| rosa_wichuraiana | Rw6G009990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 108 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 374 |
| AcoI | YGGCCR | 1 cut(s) | 300 |
| AcyI | GRCGYC | 1 cut(s) | 109 |
| AfaI | GTAC | 1 cut(s) | 179 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 337, 374, 408 |
| AluBI | AGCT | 6 cut(s) | 49, 103, 220, 226, 399, 433 |
| AluI | AGCT | 6 cut(s) | 49, 103, 220, 226, 399, 433 |
| Alw21I | GWGCWC | 4 cut(s) | 196, 222, 401, 435 |
| Alw26I | GTCTC | 1 cut(s) | 282 |
| AoxI | GGCC | 4 cut(s) | 56, 300, 309, 365 |
| ApeKI | GCWGC | 2 cut(s) | 317, 341 |
| AspLEI | GCGC | 2 cut(s) | 111, 317 |
| BalI | TGGCCA | 1 cut(s) | 302 |
| BanI | GGYRCC | 1 cut(s) | 108 |
| BanII | GRGCYC | 3 cut(s) | 222, 401, 435 |
| Bbv12I | GWGCWC | 4 cut(s) | 196, 222, 401, 435 |
| BbvI | GCAGC | 2 cut(s) | 329, 353 |
| BccI | CCATC | 3 cut(s) | 67, 80, 311 |
| BceAI | ACGGC | 1 cut(s) | 256 |
| BcoDI | GTCTC | 1 cut(s) | 282 |
| BfaI | CTAG | 1 cut(s) | 323 |
| BfoI | RGCGCY | 1 cut(s) | 112 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 308 |
| BisI | GCNGC | 2 cut(s) | 318, 342 |
| BlsI | GCNGC | 2 cut(s) | 319, 343 |
| BmiI | GGNNCC | 1 cut(s) | 110 |
| BmrI | ACTGGG | 1 cut(s) | 107 |
| BmsI | GCATC | 1 cut(s) | 26 |
| BmuI | ACTGGG | 1 cut(s) | 107 |
| BpmI | CTGGAG | 1 cut(s) | 206 |
| Bpu10I | CCTNAGC | 1 cut(s) | 104 |
| BpuEI | CTTGAG | 1 cut(s) | 183 |
| BsaAI | YACGTR | 1 cut(s) | 181 |
| BsaHI | GRCGYC | 1 cut(s) | 109 |
| BsaJI | CCNNGG | 1 cut(s) | 402 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 119, 149 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 337, 374, 408 |
| Bse1I | ACTGG | 2 cut(s) | 113, 379 |
| BseDI | CCNNGG | 1 cut(s) | 402 |
| BseGI | GGATG | 3 cut(s) | 59, 91, 129 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 337, 374, 408 |
| BseMII | CTCAG | 2 cut(s) | 180, 272 |
| BseNI | ACTGG | 2 cut(s) | 113, 379 |
| BseRI | GAGGAG | 1 cut(s) | 186 |
| BseXI | GCAGC | 2 cut(s) | 329, 353 |
| BseYI | CCCAGC | 1 cut(s) | 226 |
| BsgI | GTGCAG | 1 cut(s) | 145 |
| BshFI | GGCC | 4 cut(s) | 58, 302, 311, 367 |
| BshNI | GGYRCC | 1 cut(s) | 108 |
| BsiHKAI | GWGCWC | 4 cut(s) | 196, 222, 401, 435 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 337, 374, 408 |
| BsmAI | GTCTC | 1 cut(s) | 282 |
| BsnI | GGCC | 4 cut(s) | 58, 302, 311, 367 |
| Bsp1286I | GDGCHC | 4 cut(s) | 196, 222, 401, 435 |
| Bsp143I | GATC | 1 cut(s) | 72 |
| BspANI | GGCC | 4 cut(s) | 58, 302, 311, 367 |
| BspCNI | CTCAG | 2 cut(s) | 179, 271 |
| BspLI | GGNNCC | 1 cut(s) | 110 |
| BspQI | GCTCTTC | 1 cut(s) | 210 |
| BspT107I | GGYRCC | 1 cut(s) | 108 |
| BsrI | ACTGG | 2 cut(s) | 113, 379 |
| BssECI | CCNNGG | 1 cut(s) | 402 |
| BssMI | GATC | 1 cut(s) | 72 |
| BssNI | GRCGYC | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 1 cut(s) | 402 |
| Bst6I | CTCTTC | 1 cut(s) | 210 |
| BstACI | GRCGYC | 1 cut(s) | 109 |
| BstBAI | YACGTR | 1 cut(s) | 181 |
| BstC8I | GCNNGC | 1 cut(s) | 313 |
| BstDEI | CTNAG | 3 cut(s) | 104, 166, 258 |
| BstF5I | GGATG | 3 cut(s) | 59, 91, 129 |
| BstH2I | RGCGCY | 1 cut(s) | 112 |
| BstHHI | GCGC | 2 cut(s) | 111, 317 |
| BstKTI | GATC | 1 cut(s) | 75 |
| BstMAI | GTCTC | 1 cut(s) | 282 |
| BstMBI | GATC | 1 cut(s) | 72 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 55, 100, 159, 308, 317, 323 |
| BstSNI | TACGTA | 1 cut(s) | 181 |
| BstV1I | GCAGC | 2 cut(s) | 329, 353 |
| BsuRI | GGCC | 4 cut(s) | 58, 302, 311, 367 |
| BtsCI | GGATG | 3 cut(s) | 59, 91, 129 |
| Cac8I | GCNNGC | 1 cut(s) | 313 |
| CfoI | GCGC | 2 cut(s) | 111, 317 |
| Csp6I | GTAC | 1 cut(s) | 178 |
| CviAII | CATG | 5 cut(s) | 175, 189, 247, 385, 394 |
| CviQI | GTAC | 1 cut(s) | 178 |
| DdeI | CTNAG | 3 cut(s) | 104, 166, 258 |
| DinI | GGCGCC | 1 cut(s) | 110 |
| DpnI | GATC | 1 cut(s) | 74 |
| DpnII | GATC | 1 cut(s) | 72 |
| EaeI | YGGCCR | 1 cut(s) | 300 |
| Eam1104I | CTCTTC | 1 cut(s) | 210 |
| EarI | CTCTTC | 1 cut(s) | 210 |
| Ecl136II | GAGCTC | 3 cut(s) | 220, 399, 433 |
| Eco105I | TACGTA | 1 cut(s) | 181 |
| Eco130I | CCWWGG | 1 cut(s) | 402 |
| Eco24I | GRGCYC | 3 cut(s) | 222, 401, 435 |
| Eco53kI | GAGCTC | 3 cut(s) | 220, 399, 433 |
| EcoICRI | GAGCTC | 3 cut(s) | 220, 399, 433 |
| EcoT14I | CCWWGG | 1 cut(s) | 402 |
| EcoT38I | GRGCYC | 3 cut(s) | 222, 401, 435 |
| EgeI | GGCGCC | 1 cut(s) | 110 |
| EheI | GGCGCC | 1 cut(s) | 110 |
| ErhI | CCWWGG | 1 cut(s) | 402 |
| FaeI | CATG | 5 cut(s) | 178, 192, 250, 388, 397 |
| FaiI | YATR | 7 cut(s) | 32, 53, 176, 190, 248, 386, 395 |
| FatI | CATG | 5 cut(s) | 174, 188, 246, 384, 393 |
| Fnu4HI | GCNGC | 2 cut(s) | 318, 342 |
| FokI | GGATG | 3 cut(s) | 46, 98, 116 |
| FriOI | GRGCYC | 3 cut(s) | 222, 401, 435 |
| Fsp4HI | GCNGC | 2 cut(s) | 318, 342 |
| FspBI | CTAG | 1 cut(s) | 323 |
| GlaI | GCGC | 2 cut(s) | 110, 316 |
| GluI | GCNGC | 2 cut(s) | 318, 342 |
| GsaI | CCCAGC | 1 cut(s) | 230 |
| GsuI | CTGGAG | 1 cut(s) | 206 |
| HaeII | RGCGCY | 1 cut(s) | 112 |
| HaeIII | GGCC | 4 cut(s) | 58, 302, 311, 367 |
| HhaI | GCGC | 2 cut(s) | 111, 317 |
| Hin1I | GRCGYC | 1 cut(s) | 109 |
| Hin1II | CATG | 5 cut(s) | 178, 192, 250, 388, 397 |
| Hin6I | GCGC | 2 cut(s) | 109, 315 |
| HinP1I | GCGC | 2 cut(s) | 109, 315 |
| HincII | GTYRAC | 1 cut(s) | 382 |
| HindII | GTYRAC | 1 cut(s) | 382 |
| HinfI | GANTC | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 2 cut(s) | 79, 382 |
| Hpy188I | TCNGA | 2 cut(s) | 169, 337 |
| Hpy8I | GTNNAC | 2 cut(s) | 79, 382 |
| HpyCH4IV | ACGT | 1 cut(s) | 180 |
| HpyCH4V | TGCA | 3 cut(s) | 17, 44, 162 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 55, 100, 159, 308, 317, 323 |
| HpyF3I | CTNAG | 3 cut(s) | 104, 166, 258 |
| HpySE526I | ACGT | 1 cut(s) | 180 |
| Hsp92I | GRCGYC | 1 cut(s) | 109 |
| Hsp92II | CATG | 5 cut(s) | 178, 192, 250, 388, 397 |
| HspAI | GCGC | 2 cut(s) | 109, 315 |
| KasI | GGCGCC | 1 cut(s) | 108 |
| Kzo9I | GATC | 1 cut(s) | 72 |
| LguI | GCTCTTC | 1 cut(s) | 210 |
| LmnI | GCTCC | 3 cut(s) | 199, 225, 404 |
| LpnPI | CCDG | 6 cut(s) | 126, 212, 236, 284, 325, 360 |
| Lsp1109I | GCAGC | 2 cut(s) | 329, 353 |
| LweI | GCATC | 1 cut(s) | 26 |
| MaeI | CTAG | 1 cut(s) | 323 |
| MaeII | ACGT | 1 cut(s) | 180 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MalI | GATC | 1 cut(s) | 74 |
| MboI | GATC | 1 cut(s) | 72 |
| MboII | GAAGA | 2 cut(s) | 12, 227 |
| MhlI | GDGCHC | 4 cut(s) | 196, 222, 401, 435 |
| MlsI | TGGCCA | 1 cut(s) | 302 |
| MluCI | AATT | 2 cut(s) | 26, 426 |
| MluNI | TGGCCA | 1 cut(s) | 302 |
| Mly113I | GGCGCC | 1 cut(s) | 109 |
| MlyI | GAGTC | 1 cut(s) | 179 |
| MnlI | CCTC | 8 cut(s) | 31, 143, 167, 175, 207, 331, 400, 407 |
| Mox20I | TGGCCA | 1 cut(s) | 302 |
| MscI | TGGCCA | 1 cut(s) | 302 |
| MslI | CAYNNNNRTG | 1 cut(s) | 84 |
| Msp20I | TGGCCA | 1 cut(s) | 302 |
| MspA1I | CMGCKG | 1 cut(s) | 226 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 55, 100, 159, 308, 317, 323 |
| NarI | GGCGCC | 1 cut(s) | 109 |
| NdeII | GATC | 1 cut(s) | 72 |
| NlaIII | CATG | 5 cut(s) | 178, 192, 250, 388, 397 |
| NlaIV | GGNNCC | 1 cut(s) | 110 |
| PciSI | GCTCTTC | 1 cut(s) | 210 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 269 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 374 |
| PkrI | GCNGC | 2 cut(s) | 319, 343 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PluTI | GGCGCC | 1 cut(s) | 112 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| Ppu21I | YACGTR | 1 cut(s) | 181 |
| Psp124BI | GAGCTC | 3 cut(s) | 222, 401, 435 |
| PspFI | CCCAGC | 1 cut(s) | 226 |
| PspN4I | GGNNCC | 1 cut(s) | 110 |
| PvuII | CAGCTG | 1 cut(s) | 226 |
| RsaI | GTAC | 1 cut(s) | 179 |
| RsaNI | GTAC | 1 cut(s) | 178 |
| RseI | CAYNNNNRTG | 1 cut(s) | 84 |
| SacI | GAGCTC | 3 cut(s) | 222, 401, 435 |
| SapI | GCTCTTC | 1 cut(s) | 210 |
| SatI | GCNGC | 2 cut(s) | 318, 342 |
| Sau3AI | GATC | 1 cut(s) | 72 |
| SchI | GAGTC | 1 cut(s) | 179 |
| SduI | GDGCHC | 4 cut(s) | 196, 222, 401, 435 |
| SetI | ASST | 8 cut(s) | 51, 105, 167, 183, 222, 228, 401, 435 |
| SfaNI | GCATC | 1 cut(s) | 26 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 308 |
| SfoI | GGCGCC | 1 cut(s) | 110 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 84 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| SnaBI | TACGTA | 1 cut(s) | 181 |
| Sse9I | AATT | 2 cut(s) | 26, 426 |
| SspDI | GGCGCC | 1 cut(s) | 108 |
| SspMI | CTAG | 1 cut(s) | 323 |
| SstI | GAGCTC | 3 cut(s) | 222, 401, 435 |
| StyI | CCWWGG | 1 cut(s) | 402 |
| TaiI | ACGT | 1 cut(s) | 183 |
| TaqI | TCGA | 1 cut(s) | 263 |
| TasI | AATT | 2 cut(s) | 26, 426 |
| TseI | GCWGC | 2 cut(s) | 317, 341 |
| TspDTI | ATGAA | 3 cut(s) | 19, 228, 345 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 374 |
| XspI | CTAG | 1 cut(s) | 323 |