Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0015877

Physical Location & Seq

Genomic Coordinates Forward (+)

18631199 .. 18633884

Gene Structure 2686 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G192300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 651 bp

ATGGAGGAAGAGGTAGGAGGAGAAGAGTACTTGTTCAAGGTGGTGCTGATAGGAGACTCGGCAGTGGGCAAGTCGAACCTGCTTTCGCGGTTCGCTCGAAACGAGTTCGACCCCAACAACAAGGCCACAATTGGGGTTGAGTTTCTGACCCAGGAATTGGAAATCGATGGAAAAATGGTGAAGGCCCAGATCTGGGACACTGCTGGTCAAGAACGCTTCAGGGCTGTGACCTCTGCTTACTATAGAGGCGCTGTTGGTGCTCTTATTGTCTATGATATCAGTAGGAAGACCACCTTTGAGAGTGTCAAGCGCTGGCTCGATGAGCTTACCACTCATTGCGAAACAACAGTAGCAAGGATGTTGGTAGGAAATAAGTGTGATTTGGAGGATATCAGGGATGTGAGCGTGGAAGATGGCAAAAGCCTTGCAGAAGAAGAAGGCCTATTCTTCATGGAGACTTCTGCACTGAATGCTACCAACGTTCAAACGGCTTTCGAGATGGTTATCCGGGAGATTTACAGCAATGTCAGCAGGAAAGTCCTAAATTCCGATTCCTACAAGGCCGAGTTATCTGTCAATCGAGTAAACCTGGTGAAAAATGGGGCAGACTCAAGGAAAAGTCGGATGAATCTCTCGTGTTGTGCTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005798 GO:0005802 GO:0005829 GO:0005886 GO:0006810 GO:0006891 GO:0006950 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0012505 GO:0016020 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0031410 GO:0031982 GO:0031984 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0048219 GO:0050896 GO:0051179 GO:0051234 GO:0071944 GO:0097159 GO:0097367 GO:0097708 GO:0098791 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04144 ko04961 ko04962 ko04972 map04144 map04961 map04962 map04972

Pfam Domains

Protein Families

Ras

Protein Analysis

217

Amino Acids

24.14

Weight (kDa)

5.0

Isoelectric Point (pI)

33.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07410
fragaria_vesca	FvH4_2g17980
malus_domestica	MD05G1163800.v1.1
prunus_persica	Prupe.8G192300_v2.0.a1
pyrus_communis	pycom05g15300 pycom10g13250
rosa_chinensis	RchiOBHm_Chr6g0283281
rosa_laevigata	RLG00000012834
rosa_roxburghii	Rroxscaffold_7G00185600
rosa_rugosa	Rorug06G0152800
rosa_samantha	Rh6AG265300 Rh6BG268300 Rh6CG267600 Rh6DG261000
rosa_wichuraiana	Rw6G022990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	87
AccB7I	CCANNNNNTGG	1 cut(s)	157
AccII	CGCG	1 cut(s)	88
AciI	CCGC	1 cut(s)	88
AclI	AACGTT	1 cut(s)	480
AcsI	RAATTY	1 cut(s)	544
AcuI	CTGAAG	1 cut(s)	202
AfaI	GTAC	1 cut(s)	29
AfeI	AGCGCT	1 cut(s)	311
AfiI	CCNNNNNNNGG	4 cut(s)	132, 157, 192, 193
AgsI	TTSAA	2 cut(s)	37, 485
AjnI	CCWGG	2 cut(s)	150, 588
AluBI	AGCT	1 cut(s)	325
AluI	AGCT	1 cut(s)	325
Alw21I	GWGCWC	1 cut(s)	262
Alw26I	GTCTC	2 cut(s)	48, 449
Aor51HI	AGCGCT	1 cut(s)	311
AoxI	GGCC	4 cut(s)	123, 183, 439, 561
ApoI	RAATTY	1 cut(s)	544
AspLEI	GCGC	2 cut(s)	251, 312
AspS9I	GGNCC	1 cut(s)	184
AsuC2I	CCSGG	1 cut(s)	509
AsuHPI	GGTGA	2 cut(s)	190, 604
BauI	CACGAG	1 cut(s)	634
BbsI	GAAGAC	1 cut(s)	293
Bbv12I	GWGCWC	1 cut(s)	262
BccI	CCATC	3 cut(s)	161, 407, 493
BceAI	ACGGC	1 cut(s)	504
BciT130I	CCWGG	2 cut(s)	152, 590
BcnI	CCSGG	1 cut(s)	509
BcoDI	GTCTC	2 cut(s)	48, 449
BfmI	CTRYAG	1 cut(s)	241
BfoI	RGCGCY	2 cut(s)	252, 313
BfuAI	ACCTGC	1 cut(s)	87
BglII	AGATCT	1 cut(s)	189
BmcAI	AGTACT	1 cut(s)	29
Bme1390I	CCNGG	3 cut(s)	152, 509, 590
BmgT120I	GGNCC	1 cut(s)	184
BmrFI	CCNGG	3 cut(s)	152, 509, 590
BpiI	GAAGAC	1 cut(s)	293
BpuEI	CTTGAG	1 cut(s)	595
BpuMI	CCSGG	1 cut(s)	509
Bsa29I	ATCGAT	1 cut(s)	165
BsaBI	GATNNNNATC	1 cut(s)	503
BsaJI	CCNNGG	1 cut(s)	150
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 157, 192, 193
Bse3DI	GCAATG	2 cut(s)	334, 529
Bse8I	GATNNNNATC	1 cut(s)	503
BseBI	CCWGG	2 cut(s)	152, 590
BseCI	ATCGAT	1 cut(s)	165
BseDI	CCNNGG	1 cut(s)	150
BseGI	GGATG	3 cut(s)	363, 403, 630
BseJI	GATNNNNATC	1 cut(s)	503
BseLI	CCNNNNNNNGG	4 cut(s)	132, 157, 192, 193
BseMI	GCAATG	2 cut(s)	334, 529
BseRI	GAGGAG	1 cut(s)	33
BsgI	GTGCAG	1 cut(s)	447
Bsh1236I	CGCG	1 cut(s)	88
BshFI	GGCC	4 cut(s)	125, 185, 441, 563
BshVI	ATCGAT	1 cut(s)	165
BsiHKAI	GWGCWC	1 cut(s)	262
BsiSI	CCGG	1 cut(s)	508
BslFI	GGGAC	1 cut(s)	209
BslI	CCNNNNNNNGG	4 cut(s)	132, 157, 192, 193
BsmAI	GTCTC	2 cut(s)	48, 449
BsmFI	GGGAC	1 cut(s)	209
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	4 cut(s)	125, 185, 441, 563
Bsp1286I	GDGCHC	1 cut(s)	262
Bsp143I	GATC	1 cut(s)	189
BspACI	CCGC	1 cut(s)	88
BspANI	GGCC	4 cut(s)	125, 185, 441, 563
BspDI	ATCGAT	1 cut(s)	165
BspFNI	CGCG	1 cut(s)	88
BspMI	ACCTGC	1 cut(s)	87
BsrDI	GCAATG	2 cut(s)	334, 529
BssECI	CCNNGG	1 cut(s)	150
BssMI	GATC	1 cut(s)	189
BssSI	CACGAG	1 cut(s)	634
Bst2BI	CACGAG	1 cut(s)	634
Bst2UI	CCWGG	2 cut(s)	152, 590
Bst4CI	ACNGT	1 cut(s)	349
Bst6I	CTCTTC	2 cut(s)	3, 18
BstAPI	GCANNNNNTGC	1 cut(s)	470
BstC8I	GCNNGC	1 cut(s)	314
BstF5I	GGATG	3 cut(s)	363, 403, 630
BstFNI	CGCG	1 cut(s)	88
BstH2I	RGCGCY	2 cut(s)	252, 313
BstHHI	GCGC	2 cut(s)	251, 312
BstKTI	GATC	1 cut(s)	192
BstMAI	GTCTC	2 cut(s)	48, 449
BstMBI	GATC	1 cut(s)	189
BstMWI	GCNNNNNNNGC	4 cut(s)	257, 322, 470, 528
BstNI	CCWGG	2 cut(s)	152, 590
BstSCI	CCNGG	3 cut(s)	150, 507, 588
BstSFI	CTRYAG	1 cut(s)	241
BstUI	CGCG	1 cut(s)	88
BstV2I	GAAGAC	1 cut(s)	293
BstX2I	RGATCY	1 cut(s)	189
BstYI	RGATCY	1 cut(s)	189
Bsu15I	ATCGAT	1 cut(s)	165
BsuRI	GGCC	4 cut(s)	125, 185, 441, 563
BsuTUI	ATCGAT	1 cut(s)	165
BtsCI	GGATG	3 cut(s)	363, 403, 630
BtsI	GCAGTG	2 cut(s)	69, 198
BtsIMutI	CAGTG	3 cut(s)	69, 198, 464
BveI	ACCTGC	1 cut(s)	87
Cac8I	GCNNGC	1 cut(s)	314
CfoI	GCGC	2 cut(s)	251, 312
Cfr13I	GGNCC	1 cut(s)	184
ClaI	ATCGAT	1 cut(s)	165
CsiI	ACCWGGT	1 cut(s)	588
Csp6I	GTAC	1 cut(s)	28
CviAII	CATG	1 cut(s)	451
CviJI	RGCY	9 cut(s)	125, 185, 224, 316, 325, 423, 441, 491, 563
CviKI_1	RGCY	9 cut(s)	125, 185, 224, 316, 325, 423, 441, 491, 563
CviQI	GTAC	1 cut(s)	28
DpnI	GATC	1 cut(s)	191
DpnII	GATC	1 cut(s)	189
Eam1104I	CTCTTC	2 cut(s)	3, 18
EarI	CTCTTC	2 cut(s)	3, 18
Eco147I	AGGCCT	1 cut(s)	441
Eco32I	GATATC	2 cut(s)	277, 391
Eco47III	AGCGCT	1 cut(s)	311
Eco57I	CTGAAG	1 cut(s)	202
EcoRII	CCWGG	2 cut(s)	150, 588
EcoRV	GATATC	2 cut(s)	277, 391
FaeI	CATG	1 cut(s)	454
FaiI	YATR	3 cut(s)	243, 273, 452
FalI	AAGNNNNNCTT	2 cut(s)	278, 310
FaqI	GGGAC	1 cut(s)	209
FatI	CATG	1 cut(s)	450
FokI	GGATG	3 cut(s)	370, 410, 637
GlaI	GCGC	2 cut(s)	250, 311
HaeII	RGCGCY	2 cut(s)	252, 313
HaeIII	GGCC	4 cut(s)	125, 185, 441, 563
HapII	CCGG	1 cut(s)	508
HhaI	GCGC	2 cut(s)	251, 312
Hin1II	CATG	1 cut(s)	454
Hin6I	GCGC	2 cut(s)	249, 310
HinP1I	GCGC	2 cut(s)	249, 310
HinfI	GANTC	4 cut(s)	56, 551, 608, 628
HpaII	CCGG	1 cut(s)	508
HphI	GGTGA	2 cut(s)	190, 604
Hpy166II	GTNNAC	1 cut(s)	586
Hpy188I	TCNGA	3 cut(s)	147, 550, 624
Hpy188III	TCNNGA	2 cut(s)	209, 496
Hpy8I	GTNNAC	1 cut(s)	586
HpyAV	CCTTC	2 cut(s)	175, 431
HpyCH4III	ACNGT	1 cut(s)	349
HpyCH4IV	ACGT	1 cut(s)	480
HpyCH4V	TGCA	2 cut(s)	428, 464
HpyF10VI	GCNNNNNNNGC	4 cut(s)	257, 322, 470, 528
HpySE526I	ACGT	1 cut(s)	480
Hsp92II	CATG	1 cut(s)	454
HspAI	GCGC	2 cut(s)	249, 310
Kzo9I	GATC	1 cut(s)	189
MabI	ACCWGGT	1 cut(s)	588
MaeII	ACGT	1 cut(s)	480
MaeIII	GTNAC	1 cut(s)	226
MalI	GATC	1 cut(s)	191
MboI	GATC	1 cut(s)	189
MboII	GAAGA	7 cut(s)	20, 35, 298, 422, 439, 443, 446
MfeI	CAATTG	1 cut(s)	129
MflI	RGATCY	1 cut(s)	189
MhlI	GDGCHC	1 cut(s)	262
MluCI	AATT	3 cut(s)	129, 155, 544
MlyI	GAGTC	2 cut(s)	50, 602
MmeI	TCCRAC	1 cut(s)	602
MnlI	CCTC	5 cut(s)	4, 11, 239, 241, 379
MspI	CCGG	1 cut(s)	508
MspR9I	CCNGG	3 cut(s)	152, 509, 590
MunI	CAATTG	1 cut(s)	129
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	2 cut(s)	152, 590
MvnI	CGCG	1 cut(s)	88
MwoI	GCNNNNNNNGC	4 cut(s)	257, 322, 470, 528
NciI	CCSGG	1 cut(s)	509
NdeII	GATC	1 cut(s)	189
NlaIII	CATG	1 cut(s)	454
NmeAIII	GCCGAG	2 cut(s)	38, 589
NmuCI	GTSAC	1 cut(s)	226
PceI	AGGCCT	1 cut(s)	441
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	1 cut(s)	475
PfeI	GAWTC	2 cut(s)	551, 628
PflMI	CCANNNNNTGG	1 cut(s)	157
PfoI	TCCNGGA	1 cut(s)	507
PleI	GAGTC	2 cut(s)	50, 602
PpsI	GAGTC	2 cut(s)	50, 602
Psp1406I	AACGTT	1 cut(s)	480
Psp6I	CCWGG	2 cut(s)	150, 588
PspGI	CCWGG	2 cut(s)	150, 588
PspPI	GGNCC	1 cut(s)	184
PsuI	RGATCY	1 cut(s)	189
RsaI	GTAC	1 cut(s)	29
RsaNI	GTAC	1 cut(s)	28
Sau3AI	GATC	1 cut(s)	189
Sau96I	GGNCC	1 cut(s)	184
ScaI	AGTACT	1 cut(s)	29
SchI	GAGTC	2 cut(s)	50, 602
ScrFI	CCNGG	3 cut(s)	152, 509, 590
SduI	GDGCHC	1 cut(s)	262
SetI	ASST	8 cut(s)	15, 42, 81, 233, 296, 327, 483, 591
SexAI	ACCWGGT	1 cut(s)	588
SfcI	CTRYAG	1 cut(s)	241
SmlI	CTYRAG	1 cut(s)	610
SmoI	CTYRAG	1 cut(s)	610
Sse9I	AATT	3 cut(s)	129, 155, 544
SseBI	AGGCCT	1 cut(s)	441
SsiI	CCGC	1 cut(s)	88
StuI	AGGCCT	1 cut(s)	441
StyD4I	CCNGG	3 cut(s)	150, 507, 588
TaaI	ACNGT	1 cut(s)	349
TaiI	ACGT	1 cut(s)	483
TaqI	TCGA	7 cut(s)	74, 97, 108, 165, 318, 495, 580
TasI	AATT	3 cut(s)	129, 155, 544
TatI	WGTACW	1 cut(s)	27
TfiI	GAWTC	2 cut(s)	551, 628
TscAI	CASTG	3 cut(s)	69, 205, 471
TseFI	GTSAC	1 cut(s)	226
Tsp45I	GTSAC	1 cut(s)	226
TspDTI	ATGAA	2 cut(s)	439, 641
TspRI	CASTG	3 cut(s)	69, 205, 471
Van91I	CCANNNNNTGG	1 cut(s)	157
XapI	RAATTY	1 cut(s)	544
ZrmI	AGTACT	1 cut(s)	29

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.