Lipase (class 3)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07400 |
| fragaria_vesca | FvH4_2g17990 FvH4_2g17990 FvH4_2g17990 |
| malus_domestica | MD05G1163900.v1.1 MD10G1153600.v1.1 |
| prunus_persica | Prupe.8G192400_v2.0.a1 Prupe.8G192400_v2.0.a1 Prupe.8G192400_v2.0.a1 Prupe.8G192400_v2.0.a1 Prupe.8G192400_v2.0.a1 Prupe.8G192400_v2.0.a1 |
| pyrus_communis | pycom05g15310 pycom10g13260 |
| rosa_chinensis | RchiOBHm_Chr6g0283291 |
| rosa_laevigata | RLG00000012833 |
| rosa_multiflora | Rmu_sc0013038.1_g000013 |
| rosa_roxburghii | Rroxscaffold_7G00185590 |
| rosa_rugosa | Rorug06G0152900 |
| rosa_samantha | Rh6AG265400 Rh6BG268400 Rh6CG267500 Rh6DG261100 |
| rosa_wichuraiana | Rw6G023000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1011 |
| AarI | CACCTGC | 1 cut(s) | 425 |
| Acc36I | ACCTGC | 3 cut(s) | 319, 425, 709 |
| AccB1I | GGYRCC | 2 cut(s) | 230, 973 |
| AccI | GTMKAC | 1 cut(s) | 697 |
| AccII | CGCG | 3 cut(s) | 23, 330, 2979 |
| AclWI | GGATC | 8 cut(s) | 80, 175, 188, 408, 1558, 1823, 2523, 2536 |
| AcoI | YGGCCR | 1 cut(s) | 137 |
| AcsI | RAATTY | 9 cut(s) | 604, 1205, 1495, 2153, 2386, 2442, 2583, 2612, 2998 |
| AcuI | CTGAAG | 4 cut(s) | 119, 1764, 2088, 2160 |
| AcyI | GRCGYC | 1 cut(s) | 231 |
| AdeI | CACNNNGTG | 1 cut(s) | 770 |
| AflII | CTTAAG | 1 cut(s) | 1337 |
| AjnI | CCWGG | 3 cut(s) | 186, 261, 1810 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1933, 1965 |
| AleI | CACNNNNGTG | 1 cut(s) | 121 |
| Alw21I | GWGCWC | 4 cut(s) | 2005, 2100, 2629, 2770 |
| AlwI | GGATC | 8 cut(s) | 80, 175, 188, 408, 1558, 1823, 2523, 2536 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1256, 1730, 2330, 2398, 3080 |
| Ama87I | CYCGRG | 1 cut(s) | 377 |
| AoxI | GGCC | 8 cut(s) | 112, 137, 240, 348, 1711, 2409, 2807, 3040 |
| ApaI | GGGCCC | 1 cut(s) | 116 |
| ApoI | RAATTY | 9 cut(s) | 604, 1205, 1495, 2153, 2386, 2442, 2583, 2612, 2998 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1376, 1408, 2604, 2636 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1578, 1926, 2829 |
| AspLEI | GCGC | 6 cut(s) | 23, 37, 201, 233, 332, 2881 |
| AspS9I | GGNCC | 7 cut(s) | 112, 113, 283, 552, 1133, 1972, 2108 |
| AsuC2I | CCSGG | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 5 cut(s) | 449, 995, 1371, 1647, 1826 |
| AvaI | CYCGRG | 1 cut(s) | 377 |
| AvaII | GGWCC | 5 cut(s) | 283, 552, 1133, 1972, 2108 |
| AxyI | CCTNAGG | 1 cut(s) | 2118 |
| BaeGI | GKGCMC | 2 cut(s) | 116, 1035 |
| BamHI | GGATCC | 2 cut(s) | 180, 2528 |
| BanI | GGYRCC | 2 cut(s) | 230, 973 |
| BanII | GRGCYC | 2 cut(s) | 116, 2005 |
| BauI | CACGAG | 3 cut(s) | 684, 2352, 2946 |
| BbsI | GAAGAC | 1 cut(s) | 1198 |
| Bbv12I | GWGCWC | 4 cut(s) | 2005, 2100, 2629, 2770 |
| BccI | CCATC | 7 cut(s) | 1319, 1418, 1791, 2026, 2119, 2138, 2880 |
| BceAI | ACGGC | 5 cut(s) | 124, 172, 218, 518, 2585 |
| BciT130I | CCWGG | 3 cut(s) | 188, 263, 1812 |
| BcnI | CCSGG | 1 cut(s) | 164 |
| BfaI | CTAG | 3 cut(s) | 788, 1053, 2919 |
| BfmI | CTRYAG | 5 cut(s) | 119, 1269, 1679, 1697, 3012 |
| BfoI | RGCGCY | 2 cut(s) | 202, 234 |
| BfrI | CTTAAG | 1 cut(s) | 1337 |
| BfuAI | ACCTGC | 3 cut(s) | 319, 425, 709 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 239 |
| BglII | AGATCT | 1 cut(s) | 967 |
| BmcAI | AGTACT | 3 cut(s) | 786, 1051, 1529 |
| Bme1390I | CCNGG | 4 cut(s) | 164, 188, 263, 1812 |
| Bme18I | GGWCC | 5 cut(s) | 283, 552, 1133, 1972, 2108 |
| BmeT110I | CYCGRG | 1 cut(s) | 377 |
| BmgT120I | GGNCC | 7 cut(s) | 112, 113, 283, 552, 1133, 1972, 2108 |
| BmrFI | CCNGG | 4 cut(s) | 164, 188, 263, 1812 |
| BmrI | ACTGGG | 2 cut(s) | 2718, 2831 |
| BmuI | ACTGGG | 2 cut(s) | 2718, 2831 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1544 |
| BpiI | GAAGAC | 1 cut(s) | 1198 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 78, 110 |
| BpmI | CTGGAG | 4 cut(s) | 245, 1174, 1743, 2763 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2991 |
| BpuEI | CTTGAG | 2 cut(s) | 2258, 2970 |
| BpuMI | CCSGG | 1 cut(s) | 164 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1582, 2454 |
| BsaHI | GRCGYC | 1 cut(s) | 231 |
| BsaI | GGTCTC | 1 cut(s) | 301 |
| BsaJI | CCNNGG | 6 cut(s) | 140, 534, 2281, 2588, 3031, 3043 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 236, 266, 593, 623, 1953, 1983 |
| Bse118I | RCCGGY | 1 cut(s) | 658 |
| Bse1I | ACTGG | 9 cut(s) | 1760, 1855, 1907, 2172, 2565, 2662, 2724, 2746, 2837 |
| Bse21I | CCTNAGG | 1 cut(s) | 2118 |
| Bse3DI | GCAATG | 2 cut(s) | 1709, 2964 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1582, 2454 |
| BseBI | CCWGG | 3 cut(s) | 188, 263, 1812 |
| BseDI | CCNNGG | 6 cut(s) | 140, 534, 2281, 2588, 3031, 3043 |
| BseJI | GATNNNNATC | 2 cut(s) | 1582, 2454 |
| BseMI | GCAATG | 2 cut(s) | 1709, 2964 |
| BseMII | CTCAG | 1 cut(s) | 2109 |
| BseNI | ACTGG | 9 cut(s) | 1760, 1855, 1907, 2172, 2565, 2662, 2724, 2746, 2837 |
| BseRI | GAGGAG | 1 cut(s) | 1779 |
| BseSI | GKGCMC | 2 cut(s) | 116, 1035 |
| BseYI | CCCAGC | 1 cut(s) | 879 |
| BsgI | GTGCAG | 1 cut(s) | 3093 |
| Bsh1236I | CGCG | 3 cut(s) | 23, 330, 2979 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1548, 1586 |
| BshFI | GGCC | 8 cut(s) | 114, 139, 242, 350, 1713, 2411, 2809, 3042 |
| BshNI | GGYRCC | 2 cut(s) | 230, 973 |
| BsiEI | CGRYCG | 2 cut(s) | 1548, 1586 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2005, 2100, 2629, 2770 |
| BsiHKCI | CYCGRG | 1 cut(s) | 377 |
| BsiSI | CCGG | 3 cut(s) | 163, 175, 659 |
| BslFI | GGGAC | 2 cut(s) | 565, 1146 |
| BsmBI | CGTCTC | 3 cut(s) | 38, 256, 2194 |
| BsmFI | GGGAC | 2 cut(s) | 565, 1146 |
| BsmI | GAATGC | 3 cut(s) | 901, 957, 1588 |
| BsnI | GGCC | 8 cut(s) | 114, 139, 242, 350, 1713, 2411, 2809, 3042 |
| Bso31I | GGTCTC | 1 cut(s) | 301 |
| BsoBI | CYCGRG | 1 cut(s) | 377 |
| Bsp120I | GGGCCC | 1 cut(s) | 112 |
| Bsp1286I | GDGCHC | 6 cut(s) | 116, 1035, 2005, 2100, 2629, 2770 |
| Bsp1407I | TGTACA | 3 cut(s) | 714, 1138, 1871 |
| BspANI | GGCC | 8 cut(s) | 114, 139, 242, 350, 1713, 2411, 2809, 3042 |
| BspCNI | CTCAG | 1 cut(s) | 2110 |
| BspFNI | CGCG | 3 cut(s) | 23, 330, 2979 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspMAI | CTGCAG | 4 cut(s) | 123, 1683, 1701, 3016 |
| BspMI | ACCTGC | 3 cut(s) | 319, 425, 709 |
| BspPI | GGATC | 8 cut(s) | 80, 175, 188, 408, 1558, 1823, 2523, 2536 |
| BspT107I | GGYRCC | 2 cut(s) | 230, 973 |
| BspTI | CTTAAG | 1 cut(s) | 1337 |
| BspTNI | GGTCTC | 1 cut(s) | 301 |
| BsrDI | GCAATG | 2 cut(s) | 1709, 2964 |
| BsrFI | RCCGGY | 1 cut(s) | 658 |
| BsrGI | TGTACA | 3 cut(s) | 714, 1138, 1871 |
| BsrI | ACTGG | 9 cut(s) | 1760, 1855, 1907, 2172, 2565, 2662, 2724, 2746, 2837 |
| BssAI | RCCGGY | 1 cut(s) | 658 |
| BssECI | CCNNGG | 6 cut(s) | 140, 534, 2281, 2588, 3031, 3043 |
| BssNAI | GTATAC | 1 cut(s) | 698 |
| BssNI | GRCGYC | 1 cut(s) | 231 |
| BssSI | CACGAG | 3 cut(s) | 684, 2352, 2946 |
| BssT1I | CCWWGG | 4 cut(s) | 2281, 2588, 3031, 3043 |
| Bst1107I | GTATAC | 1 cut(s) | 698 |
| Bst2BI | CACGAG | 3 cut(s) | 684, 2352, 2946 |
| Bst2UI | CCWGG | 3 cut(s) | 188, 263, 1812 |
| Bst4CI | ACNGT | 5 cut(s) | 416, 1270, 1299, 1732, 2188 |
| Bst6I | CTCTTC | 2 cut(s) | 1954, 2862 |
| BstACI | GRCGYC | 1 cut(s) | 231 |
| BstAFI | CTTAAG | 1 cut(s) | 1337 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2651, 3080 |
| BstAUI | TGTACA | 3 cut(s) | 714, 1138, 1871 |
| BstC8I | GCNNGC | 8 cut(s) | 209, 723, 1035, 2248, 2544, 2955, 2974, 3040 |
| BstDEI | CTNAG | 6 cut(s) | 1177, 1568, 1993, 2118, 2991, 3096 |
| BstDSI | CCRYGG | 2 cut(s) | 140, 534 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1662 |
| BstFNI | CGCG | 3 cut(s) | 23, 330, 2979 |
| BstH2I | RGCGCY | 2 cut(s) | 202, 234 |
| BstHHI | GCGC | 6 cut(s) | 23, 37, 201, 233, 332, 2881 |
| BstMCI | CGRYCG | 2 cut(s) | 1548, 1586 |
| BstNI | CCWGG | 3 cut(s) | 188, 263, 1812 |
| BstNSI | RCATGY | 2 cut(s) | 2057, 2957 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1544 |
| BstSCI | CCNGG | 4 cut(s) | 162, 186, 261, 1810 |
| BstSFI | CTRYAG | 5 cut(s) | 119, 1269, 1679, 1697, 3012 |
| BstSLI | GKGCMC | 2 cut(s) | 116, 1035 |
| BstUI | CGCG | 3 cut(s) | 23, 330, 2979 |
| BstV2I | GAAGAC | 1 cut(s) | 1198 |
| BstX2I | RGATCY | 5 cut(s) | 180, 967, 1550, 1828, 2528 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 123, 1895 |
| BstYI | RGATCY | 5 cut(s) | 180, 967, 1550, 1828, 2528 |
| BstZ17I | GTATAC | 1 cut(s) | 698 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2118 |
| BsuRI | GGCC | 8 cut(s) | 114, 139, 242, 350, 1713, 2411, 2809, 3042 |
| BtgI | CCRYGG | 2 cut(s) | 140, 534 |
| BtgZI | GCGATG | 1 cut(s) | 155 |
| BtsI | GCAGTG | 4 cut(s) | 116, 128, 783, 1407 |
| BveI | ACCTGC | 3 cut(s) | 319, 425, 709 |
| Cac8I | GCNNGC | 8 cut(s) | 209, 723, 1035, 2248, 2544, 2955, 2974, 3040 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1256, 1730, 2330, 2398, 3080 |
| CciI | TCATGA | 1 cut(s) | 523 |
| CfoI | GCGC | 6 cut(s) | 23, 37, 201, 233, 332, 2881 |
| Cfr10I | RCCGGY | 1 cut(s) | 658 |
| Cfr13I | GGNCC | 7 cut(s) | 112, 113, 283, 552, 1133, 1972, 2108 |
| CsiI | ACCWGGT | 1 cut(s) | 1810 |
| DdeI | CTNAG | 6 cut(s) | 1177, 1568, 1993, 2118, 2991, 3096 |
| DinI | GGCGCC | 1 cut(s) | 232 |
| DraIII | CACNNNGTG | 1 cut(s) | 770 |
| EaeI | YGGCCR | 1 cut(s) | 137 |
| Eam1104I | CTCTTC | 2 cut(s) | 1954, 2862 |
| EarI | CTCTTC | 2 cut(s) | 1954, 2862 |
| EciI | GGCGGA | 1 cut(s) | 443 |
| Ecl136II | GAGCTC | 1 cut(s) | 2003 |
| Eco130I | CCWWGG | 4 cut(s) | 2281, 2588, 3031, 3043 |
| Eco147I | AGGCCT | 1 cut(s) | 2809 |
| Eco24I | GRGCYC | 2 cut(s) | 116, 2005 |
| Eco31I | GGTCTC | 1 cut(s) | 301 |
| Eco32I | GATATC | 1 cut(s) | 1846 |
| Eco47I | GGWCC | 5 cut(s) | 283, 552, 1133, 1972, 2108 |
| Eco53kI | GAGCTC | 1 cut(s) | 2003 |
| Eco57I | CTGAAG | 4 cut(s) | 119, 1764, 2088, 2160 |
| Eco81I | CCTNAGG | 1 cut(s) | 2118 |
| Eco88I | CYCGRG | 1 cut(s) | 377 |
| EcoICRI | GAGCTC | 1 cut(s) | 2003 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1662 |
| EcoO109I | RGGNCCY | 2 cut(s) | 112, 1133 |
| EcoRI | GAATTC | 2 cut(s) | 2442, 2583 |
| EcoRII | CCWGG | 3 cut(s) | 186, 261, 1810 |
| EcoRV | GATATC | 1 cut(s) | 1846 |
| EcoT14I | CCWWGG | 4 cut(s) | 2281, 2588, 3031, 3043 |
| EcoT22I | ATGCAT | 2 cut(s) | 869, 2055 |
| EcoT38I | GRGCYC | 2 cut(s) | 116, 2005 |
| EgeI | GGCGCC | 1 cut(s) | 232 |
| EheI | GGCGCC | 1 cut(s) | 232 |
| ErhI | CCWWGG | 4 cut(s) | 2281, 2588, 3031, 3043 |
| Esp3I | CGTCTC | 3 cut(s) | 38, 256, 2194 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 338, 370, 2453, 2485 |
| FaqI | GGGAC | 2 cut(s) | 565, 1146 |
| FauI | CCCGC | 2 cut(s) | 1042, 2541 |
| FauNDI | CATATG | 3 cut(s) | 1372, 1462, 2713 |
| FblI | GTMKAC | 1 cut(s) | 697 |
| FriOI | GRGCYC | 2 cut(s) | 116, 2005 |
| FspBI | CTAG | 3 cut(s) | 788, 1053, 2919 |
| GlaI | GCGC | 6 cut(s) | 22, 36, 200, 232, 331, 2880 |
| GsaI | CCCAGC | 1 cut(s) | 883 |
| GsuI | CTGGAG | 4 cut(s) | 245, 1174, 1743, 2763 |
| HaeII | RGCGCY | 2 cut(s) | 202, 234 |
| HaeIII | GGCC | 8 cut(s) | 114, 139, 242, 350, 1713, 2411, 2809, 3042 |
| HapII | CCGG | 3 cut(s) | 163, 175, 659 |
| HhaI | GCGC | 6 cut(s) | 23, 37, 201, 233, 332, 2881 |
| Hin1I | GRCGYC | 1 cut(s) | 231 |
| Hin6I | GCGC | 6 cut(s) | 21, 35, 199, 231, 330, 2879 |
| HinP1I | GCGC | 6 cut(s) | 21, 35, 199, 231, 330, 2879 |
| HincII | GTYRAC | 2 cut(s) | 1539, 2851 |
| HindII | GTYRAC | 2 cut(s) | 1539, 2851 |
| HindIII | AAGCTT | 1 cut(s) | 2774 |
| HpaII | CCGG | 3 cut(s) | 163, 175, 659 |
| HphI | GGTGA | 5 cut(s) | 449, 995, 1371, 1647, 1826 |
| Hpy166II | GTNNAC | 7 cut(s) | 301, 337, 698, 1539, 1874, 1972, 2851 |
| Hpy8I | GTNNAC | 7 cut(s) | 301, 337, 698, 1539, 1874, 1972, 2851 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyAV | CCTTC | 7 cut(s) | 94, 402, 466, 1467, 1960, 2135, 2336 |
| HpyCH4III | ACNGT | 5 cut(s) | 416, 1270, 1299, 1732, 2188 |
| HpyCH4IV | ACGT | 3 cut(s) | 405, 443, 1093 |
| HpyF3I | CTNAG | 6 cut(s) | 1177, 1568, 1993, 2118, 2991, 3096 |
| HpySE526I | ACGT | 3 cut(s) | 405, 443, 1093 |
| Hsp92I | GRCGYC | 1 cut(s) | 231 |
| HspAI | GCGC | 6 cut(s) | 21, 35, 199, 231, 330, 2879 |
| KasI | GGCGCC | 1 cut(s) | 230 |
| MabI | ACCWGGT | 1 cut(s) | 1810 |
| MaeI | CTAG | 3 cut(s) | 788, 1053, 2919 |
| MaeII | ACGT | 3 cut(s) | 405, 443, 1093 |
| MaeIII | GTNAC | 7 cut(s) | 541, 758, 950, 1377, 1509, 2226, 2602 |
| MfeI | CAATTG | 2 cut(s) | 1115, 2646 |
| MflI | RGATCY | 5 cut(s) | 180, 967, 1550, 1828, 2528 |
| MhlI | GDGCHC | 6 cut(s) | 116, 1035, 2005, 2100, 2629, 2770 |
| Mly113I | GGCGCC | 1 cut(s) | 231 |
| MlyI | GAGTC | 3 cut(s) | 239, 1763, 1998 |
| MmeI | TCCRAC | 4 cut(s) | 279, 1528, 1978, 2097 |
| Mph1103I | ATGCAT | 2 cut(s) | 869, 2055 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1578, 1926, 2829 |
| MslI | CAYNNNNRTG | 4 cut(s) | 121, 528, 1011, 1061 |
| MspA1I | CMGCKG | 2 cut(s) | 1037, 3017 |
| MspCI | CTTAAG | 1 cut(s) | 1337 |
| MspI | CCGG | 3 cut(s) | 163, 175, 659 |
| MspR9I | CCNGG | 4 cut(s) | 164, 188, 263, 1812 |
| MunI | CAATTG | 2 cut(s) | 1115, 2646 |
| Mva1269I | GAATGC | 3 cut(s) | 901, 957, 1588 |
| MvaI | CCWGG | 3 cut(s) | 188, 263, 1812 |
| MvnI | CGCG | 3 cut(s) | 23, 330, 2979 |
| NarI | GGCGCC | 1 cut(s) | 231 |
| NciI | CCSGG | 1 cut(s) | 164 |
| NdeI | CATATG | 3 cut(s) | 1372, 1462, 2713 |
| NmeAIII | GCCGAG | 1 cut(s) | 83 |
| NmuCI | GTSAC | 3 cut(s) | 758, 1377, 1509 |
| NsiI | ATGCAT | 2 cut(s) | 869, 2055 |
| NspI | RCATGY | 2 cut(s) | 2057, 2957 |
| OliI | CACNNNNGTG | 1 cut(s) | 121 |
| PaeI | GCATGC | 1 cut(s) | 2957 |
| PaeR7I | CTCGAG | 1 cut(s) | 377 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PaqCI | CACCTGC | 1 cut(s) | 425 |
| PceI | AGGCCT | 1 cut(s) | 2809 |
| PctI | GAATGC | 3 cut(s) | 901, 957, 1588 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1578, 1926, 2829 |
| PfeI | GAWTC | 9 cut(s) | 623, 1253, 1623, 1922, 2042, 2069, 2314, 2372, 2981 |
| PflFI | GACNNNGTC | 1 cut(s) | 248 |
| PfoI | TCCNGGA | 1 cut(s) | 261 |
| Ple19I | CGATCG | 1 cut(s) | 1586 |
| PleI | GAGTC | 3 cut(s) | 239, 1762, 1997 |
| PluTI | GGCGCC | 1 cut(s) | 234 |
| PpsI | GAGTC | 3 cut(s) | 239, 1762, 1997 |
| PpuMI | RGGWCCY | 1 cut(s) | 1133 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1544 |
| PsiI | TTATAA | 1 cut(s) | 1011 |
| Psp124BI | GAGCTC | 1 cut(s) | 2005 |
| Psp5II | RGGWCCY | 1 cut(s) | 1133 |
| Psp6I | CCWGG | 3 cut(s) | 186, 261, 1810 |
| PspFI | CCCAGC | 1 cut(s) | 879 |
| PspGI | CCWGG | 3 cut(s) | 186, 261, 1810 |
| PspOMI | GGGCCC | 1 cut(s) | 112 |
| PspPI | GGNCC | 7 cut(s) | 112, 113, 283, 552, 1133, 1972, 2108 |
| PspPPI | RGGWCCY | 1 cut(s) | 1133 |
| PstI | CTGCAG | 4 cut(s) | 123, 1683, 1701, 3016 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1256, 1730, 2330, 2398, 3080 |
| PsuI | RGATCY | 5 cut(s) | 180, 967, 1550, 1828, 2528 |
| PsyI | GACNNNGTC | 1 cut(s) | 248 |
| PvuI | CGATCG | 1 cut(s) | 1586 |
| PvuII | CAGCTG | 1 cut(s) | 3017 |
| RseI | CAYNNNNRTG | 4 cut(s) | 121, 528, 1011, 1061 |
| SacI | GAGCTC | 1 cut(s) | 2005 |
| Sau96I | GGNCC | 7 cut(s) | 112, 113, 283, 552, 1133, 1972, 2108 |
| ScaI | AGTACT | 3 cut(s) | 786, 1051, 1529 |
| SchI | GAGTC | 3 cut(s) | 239, 1763, 1998 |
| ScrFI | CCNGG | 4 cut(s) | 164, 188, 263, 1812 |
| SduI | GDGCHC | 6 cut(s) | 116, 1035, 2005, 2100, 2629, 2770 |
| SexAI | ACCWGGT | 1 cut(s) | 1810 |
| SfcI | CTRYAG | 5 cut(s) | 119, 1269, 1679, 1697, 3012 |
| SfoI | GGCGCC | 1 cut(s) | 232 |
| Sfr274I | CTCGAG | 1 cut(s) | 377 |
| SinI | GGWCC | 5 cut(s) | 283, 552, 1133, 1972, 2108 |
| SlaI | CTCGAG | 1 cut(s) | 377 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 121, 528, 1011, 1061 |
| SmlI | CTYRAG | 5 cut(s) | 377, 1337, 2237, 2985, 3085 |
| SmoI | CTYRAG | 5 cut(s) | 377, 1337, 2237, 2985, 3085 |
| SphI | GCATGC | 1 cut(s) | 2957 |
| SseBI | AGGCCT | 1 cut(s) | 2809 |
| SspDI | GGCGCC | 1 cut(s) | 230 |
| SspI | AATATT | 2 cut(s) | 2299, 2308 |
| SspMI | CTAG | 3 cut(s) | 788, 1053, 2919 |
| SstI | GAGCTC | 1 cut(s) | 2005 |
| StuI | AGGCCT | 1 cut(s) | 2809 |
| StyD4I | CCNGG | 4 cut(s) | 162, 186, 261, 1810 |
| StyI | CCWWGG | 4 cut(s) | 2281, 2588, 3031, 3043 |
| TaaI | ACNGT | 5 cut(s) | 416, 1270, 1299, 1732, 2188 |
| TaiI | ACGT | 3 cut(s) | 408, 446, 1096 |
| TaqI | TCGA | 7 cut(s) | 378, 574, 626, 632, 1582, 1752, 2458 |
| TaqII | GACCGA | 3 cut(s) | 506, 569, 1534 |
| TatI | WGTACW | 7 cut(s) | 474, 714, 784, 1049, 1138, 1527, 1871 |
| TauI | GCSGC | 6 cut(s) | 153, 204, 207, 231, 2903, 2979 |
| TfiI | GAWTC | 9 cut(s) | 623, 1253, 1623, 1922, 2042, 2069, 2314, 2372, 2981 |
| TseFI | GTSAC | 3 cut(s) | 758, 1377, 1509 |
| Tsp45I | GTSAC | 3 cut(s) | 758, 1377, 1509 |
| TspGWI | ACGGA | 3 cut(s) | 238, 1995, 2123 |
| Tth111I | GACNNNGTC | 1 cut(s) | 248 |
| Vha464I | CTTAAG | 1 cut(s) | 1337 |
| VpaK11BI | GGWCC | 5 cut(s) | 283, 552, 1133, 1972, 2108 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1662 |
| XapI | RAATTY | 9 cut(s) | 604, 1205, 1495, 2153, 2386, 2442, 2583, 2612, 2998 |
| XceI | RCATGY | 2 cut(s) | 2057, 2957 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 887 |
| XhoI | CTCGAG | 1 cut(s) | 377 |
| XmiI | GTMKAC | 1 cut(s) | 697 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1578, 1926, 2829 |
| XspI | CTAG | 3 cut(s) | 788, 1053, 2919 |
| ZrmI | AGTACT | 3 cut(s) | 786, 1051, 1529 |
| Zsp2I | ATGCAT | 2 cut(s) | 869, 2055 |