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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g24120 |
| prunus_persica | Prupe.8G247400_v2.0.a1 |
| pyrus_communis | pycom11g25860 |
| rosa_chinensis | RchiOBHm_Chr6g0291921 |
| rosa_laevigata | RLG00000012078 |
| rosa_roxburghii | Rroxscaffold_7G00175620 |
| rosa_rugosa | Rorug06G0221800 |
| rosa_samantha | Rh6AG335400 Rh6BG342800 Rh6CG349000 Rh6DG335700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 136 |
| AcsI | RAATTY | 1 cut(s) | 231 |
| AcuI | CTGAAG | 1 cut(s) | 170 |
| AfaI | GTAC | 1 cut(s) | 182 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 163, 202, 379 |
| AgsI | TTSAA | 6 cut(s) | 230, 263, 326, 407, 500, 513 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 379, 411 |
| AluBI | AGCT | 2 cut(s) | 352, 605 |
| AluI | AGCT | 2 cut(s) | 352, 605 |
| AlwI | GGATC | 1 cut(s) | 136 |
| AoxI | GGCC | 3 cut(s) | 109, 536, 622 |
| ApeKI | GCWGC | 1 cut(s) | 149 |
| ApoI | RAATTY | 1 cut(s) | 231 |
| AspS9I | GGNCC | 3 cut(s) | 273, 293, 335 |
| AsuHPI | GGTGA | 3 cut(s) | 46, 358, 482 |
| AsuNHI | GCTAGC | 1 cut(s) | 484 |
| AvaII | GGWCC | 3 cut(s) | 273, 293, 335 |
| AxyI | CCTNAGG | 1 cut(s) | 106 |
| BauI | CACGAG | 1 cut(s) | 339 |
| BbvI | GCAGC | 1 cut(s) | 161 |
| BccI | CCATC | 1 cut(s) | 120 |
| BfaI | CTAG | 2 cut(s) | 81, 485 |
| BisI | GCNGC | 1 cut(s) | 150 |
| BlsI | GCNGC | 1 cut(s) | 151 |
| Bme18I | GGWCC | 3 cut(s) | 273, 293, 335 |
| BmgT120I | GGNCC | 3 cut(s) | 273, 293, 335 |
| BmiI | GGNNCC | 4 cut(s) | 275, 294, 336, 384 |
| BmsI | GCATC | 2 cut(s) | 45, 568 |
| BmtI | GCTAGC | 1 cut(s) | 488 |
| BoxI | GACNNNNGTC | 1 cut(s) | 333 |
| BpmI | CTGGAG | 1 cut(s) | 179 |
| BpuEI | CTTGAG | 1 cut(s) | 108 |
| BsaJI | CCNNGG | 1 cut(s) | 632 |
| BsaWI | WCCGGW | 1 cut(s) | 202 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 163, 202, 379 |
| Bse21I | CCTNAGG | 1 cut(s) | 106 |
| Bse3DI | GCAATG | 2 cut(s) | 75, 495 |
| BseDI | CCNNGG | 1 cut(s) | 632 |
| BseGI | GGATG | 2 cut(s) | 112, 368 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 163, 202, 379 |
| BseMI | GCAATG | 2 cut(s) | 75, 495 |
| BseRI | GAGGAG | 1 cut(s) | 625 |
| BseXI | GCAGC | 1 cut(s) | 161 |
| BseYI | CCCAGC | 2 cut(s) | 24, 145 |
| BshFI | GGCC | 3 cut(s) | 111, 538, 624 |
| BsiSI | CCGG | 1 cut(s) | 203 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 163, 202, 379 |
| BsnI | GGCC | 3 cut(s) | 111, 538, 624 |
| Bsp143I | GATC | 1 cut(s) | 141 |
| BspANI | GGCC | 3 cut(s) | 111, 538, 624 |
| BspHI | TCATGA | 1 cut(s) | 63 |
| BspLI | GGNNCC | 4 cut(s) | 275, 294, 336, 384 |
| BspOI | GCTAGC | 1 cut(s) | 488 |
| BspPI | GGATC | 1 cut(s) | 136 |
| BsrDI | GCAATG | 2 cut(s) | 75, 495 |
| BssECI | CCNNGG | 1 cut(s) | 632 |
| BssMI | GATC | 1 cut(s) | 141 |
| BssSI | CACGAG | 1 cut(s) | 339 |
| BssT1I | CCWWGG | 1 cut(s) | 632 |
| Bst2BI | CACGAG | 1 cut(s) | 339 |
| Bst6I | CTCTTC | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 1 cut(s) | 486 |
| BstDEI | CTNAG | 2 cut(s) | 106, 642 |
| BstF5I | GGATG | 2 cut(s) | 112, 368 |
| BstKTI | GATC | 1 cut(s) | 144 |
| BstMBI | GATC | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 535 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 333 |
| BstV1I | GCAGC | 1 cut(s) | 161 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 32 |
| Bsu36I | CCTNAGG | 1 cut(s) | 106 |
| BsuRI | GGCC | 3 cut(s) | 111, 538, 624 |
| BtsCI | GGATG | 2 cut(s) | 112, 368 |
| Cac8I | GCNNGC | 1 cut(s) | 486 |
| CciI | TCATGA | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 3 cut(s) | 273, 293, 335 |
| CseI | GACGC | 1 cut(s) | 490 |
| Csp6I | GTAC | 1 cut(s) | 181 |
| CviAII | CATG | 3 cut(s) | 64, 270, 548 |
| CviQI | GTAC | 1 cut(s) | 181 |
| DdeI | CTNAG | 2 cut(s) | 106, 642 |
| DpnI | GATC | 1 cut(s) | 143 |
| DpnII | GATC | 1 cut(s) | 141 |
| Eam1104I | CTCTTC | 1 cut(s) | 386 |
| EarI | CTCTTC | 1 cut(s) | 386 |
| Eco130I | CCWWGG | 1 cut(s) | 632 |
| Eco32I | GATATC | 1 cut(s) | 639 |
| Eco47I | GGWCC | 3 cut(s) | 273, 293, 335 |
| Eco57I | CTGAAG | 1 cut(s) | 170 |
| Eco81I | CCTNAGG | 1 cut(s) | 106 |
| EcoRV | GATATC | 1 cut(s) | 639 |
| EcoT14I | CCWWGG | 1 cut(s) | 632 |
| ErhI | CCWWGG | 1 cut(s) | 632 |
| FaeI | CATG | 3 cut(s) | 67, 273, 551 |
| FaiI | YATR | 8 cut(s) | 65, 140, 179, 271, 549, 563, 608, 621 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 625 |
| FatI | CATG | 3 cut(s) | 63, 269, 547 |
| Fnu4HI | GCNGC | 1 cut(s) | 150 |
| FokI | GGATG | 2 cut(s) | 99, 355 |
| Fsp4HI | GCNGC | 1 cut(s) | 150 |
| FspBI | CTAG | 2 cut(s) | 81, 485 |
| GluI | GCNGC | 1 cut(s) | 150 |
| GsaI | CCCAGC | 2 cut(s) | 28, 149 |
| GsuI | CTGGAG | 1 cut(s) | 179 |
| HaeIII | GGCC | 3 cut(s) | 111, 538, 624 |
| HapII | CCGG | 1 cut(s) | 203 |
| HgaI | GACGC | 1 cut(s) | 490 |
| Hin1II | CATG | 3 cut(s) | 67, 273, 551 |
| HincII | GTYRAC | 1 cut(s) | 480 |
| HindII | GTYRAC | 1 cut(s) | 480 |
| HinfI | GANTC | 4 cut(s) | 212, 226, 266, 322 |
| HpaII | CCGG | 1 cut(s) | 203 |
| HphI | GGTGA | 3 cut(s) | 46, 358, 482 |
| Hpy166II | GTNNAC | 3 cut(s) | 283, 338, 480 |
| Hpy188I | TCNGA | 3 cut(s) | 174, 577, 591 |
| Hpy188III | TCNNGA | 4 cut(s) | 64, 125, 196, 326 |
| Hpy8I | GTNNAC | 3 cut(s) | 283, 338, 480 |
| HpyAV | CCTTC | 3 cut(s) | 30, 67, 194 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 554 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 535 |
| HpyF3I | CTNAG | 2 cut(s) | 106, 642 |
| Hsp92II | CATG | 3 cut(s) | 67, 273, 551 |
| Kzo9I | GATC | 1 cut(s) | 141 |
| LmnI | GCTCC | 1 cut(s) | 382 |
| LpnPI | CCDG | 8 cut(s) | 31, 38, 42, 153, 159, 173, 209, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 161 |
| LweI | GCATC | 2 cut(s) | 45, 568 |
| MaeI | CTAG | 2 cut(s) | 81, 485 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MalI | GATC | 1 cut(s) | 143 |
| MboI | GATC | 1 cut(s) | 141 |
| MboII | GAAGA | 6 cut(s) | 275, 403, 419, 445, 457, 512 |
| MluCI | AATT | 2 cut(s) | 117, 231 |
| MnlI | CCTC | 9 cut(s) | 132, 157, 247, 307, 337, 487, 519, 603, 606 |
| MspI | CCGG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 535 |
| NdeII | GATC | 1 cut(s) | 141 |
| NheI | GCTAGC | 1 cut(s) | 484 |
| NlaIII | CATG | 3 cut(s) | 67, 273, 551 |
| NlaIV | GGNNCC | 4 cut(s) | 275, 294, 336, 384 |
| NmuCI | GTSAC | 1 cut(s) | 100 |
| PagI | TCATGA | 1 cut(s) | 63 |
| PfeI | GAWTC | 4 cut(s) | 212, 226, 266, 322 |
| PkrI | GCNGC | 1 cut(s) | 151 |
| PshAI | GACNNNNGTC | 1 cut(s) | 333 |
| PspFI | CCCAGC | 2 cut(s) | 24, 145 |
| PspN4I | GGNNCC | 4 cut(s) | 275, 294, 336, 384 |
| PspPI | GGNCC | 3 cut(s) | 273, 293, 335 |
| RsaI | GTAC | 1 cut(s) | 182 |
| RsaNI | GTAC | 1 cut(s) | 181 |
| SatI | GCNGC | 1 cut(s) | 150 |
| Sau3AI | GATC | 1 cut(s) | 141 |
| Sau96I | GGNCC | 3 cut(s) | 273, 293, 335 |
| SetI | ASST | 7 cut(s) | 59, 107, 186, 348, 354, 498, 607 |
| SfaNI | GCATC | 2 cut(s) | 45, 568 |
| SinI | GGWCC | 3 cut(s) | 273, 293, 335 |
| SmlI | CTYRAG | 2 cut(s) | 123, 626 |
| SmoI | CTYRAG | 2 cut(s) | 123, 626 |
| Sse9I | AATT | 2 cut(s) | 117, 231 |
| SspMI | CTAG | 2 cut(s) | 81, 485 |
| StyI | CCWWGG | 1 cut(s) | 632 |
| TaqI | TCGA | 1 cut(s) | 398 |
| TasI | AATT | 2 cut(s) | 117, 231 |
| TfiI | GAWTC | 4 cut(s) | 212, 226, 266, 322 |
| TseFI | GTSAC | 1 cut(s) | 100 |
| TseI | GCWGC | 1 cut(s) | 149 |
| Tsp45I | GTSAC | 1 cut(s) | 100 |
| TspDTI | ATGAA | 4 cut(s) | 49, 80, 536, 582 |
| VpaK11BI | GGWCC | 3 cut(s) | 273, 293, 335 |
| XapI | RAATTY | 1 cut(s) | 231 |
| XspI | CTAG | 2 cut(s) | 81, 485 |