aspartic-type endopeptidase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g08750 |
| malus_domestica | MD05G1066700.v1.1 MD10G1076600.v1.1 |
| prunus_persica | Prupe.8G097400_v2.0.a1 |
| pyrus_communis | pycom01g11850 pycom05g05770 pycom10g05990 pycom11g13950 |
| rosa_chinensis | RchiOBHm_Chr6g0264211 |
| rosa_laevigata | RLG00000014280 |
| rosa_multiflora | Rmu_co8431547.1_g000001 Rmu_sc0027696.1_g000001 Rmu_sc0027697.1_g000001 |
| rosa_roxburghii | Rroxscaffold_176G00431610 Rroxscaffold_7G00203400 |
| rosa_rugosa | Rorug06G0010100 |
| rosa_samantha | Rh6AG130200 Rh6BG127500 Rh6CG126100 Rh6DG112800 |
| rosa_wichuraiana | Rw6G011340 Rw6G011400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 513, 1413, 2111 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1302, 2603 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3371 |
| AccBSI | CCGCTC | 1 cut(s) | 1686 |
| AccI | GTMKAC | 2 cut(s) | 2075, 3164 |
| AccII | CGCG | 2 cut(s) | 442, 3666 |
| AccIII | TCCGGA | 1 cut(s) | 550 |
| AciI | CCGC | 9 cut(s) | 440, 1257, 1621, 1624, 1684, 1694, 2836, 3046, 3664 |
| AclI | AACGTT | 2 cut(s) | 1746, 1752 |
| AclWI | GGATC | 5 cut(s) | 580, 2577, 2833, 2846, 2846 |
| AcoI | YGGCCR | 2 cut(s) | 748, 1073 |
| AcuI | CTGAAG | 3 cut(s) | 525, 2567, 2820 |
| AcyI | GRCGYC | 1 cut(s) | 1906 |
| AflIII | ACRYGT | 1 cut(s) | 2347 |
| AhlI | ACTAGT | 1 cut(s) | 2078 |
| AjiI | CACGTC | 1 cut(s) | 322 |
| AjnI | CCWGG | 5 cut(s) | 1079, 1870, 1958, 2163, 2417 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 392, 424, 644, 676 |
| AluBI | AGCT | 7 cut(s) | 1493, 1817, 2092, 2524, 2582, 3178, 3855 |
| AluI | AGCT | 7 cut(s) | 1493, 1817, 2092, 2524, 2582, 3178, 3855 |
| Alw26I | GTCTC | 6 cut(s) | 1051, 1456, 1706, 2012, 2046, 3388 |
| AlwI | GGATC | 5 cut(s) | 580, 2577, 2833, 2846, 2846 |
| Ama87I | CYCGRG | 1 cut(s) | 2049 |
| Aor13HI | TCCGGA | 1 cut(s) | 550 |
| AoxI | GGCC | 5 cut(s) | 748, 1073, 1077, 1512, 3747 |
| ApeKI | GCWGC | 4 cut(s) | 1490, 1778, 1817, 2750 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 27 |
| AseI | ATTAAT | 2 cut(s) | 2034, 3810 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 350, 2406 |
| AspLEI | GCGC | 4 cut(s) | 2302, 2760, 3668, 3829 |
| AspS9I | GGNCC | 6 cut(s) | 982, 1259, 1513, 1642, 2068, 3748 |
| AsuC2I | CCSGG | 1 cut(s) | 1342 |
| AsuHPI | GGTGA | 5 cut(s) | 962, 1307, 1431, 2959, 3136 |
| AsuII | TTCGAA | 1 cut(s) | 2516 |
| AsuNHI | GCTAGC | 1 cut(s) | 3800 |
| AvaI | CYCGRG | 1 cut(s) | 2049 |
| AvaII | GGWCC | 4 cut(s) | 982, 1259, 1642, 2068 |
| BamHI | GGATCC | 1 cut(s) | 2838 |
| BauI | CACGAG | 1 cut(s) | 3398 |
| BbsI | GAAGAC | 1 cut(s) | 1976 |
| BbvI | GCAGC | 4 cut(s) | 1502, 1765, 1804, 2762 |
| BccI | CCATC | 5 cut(s) | 1015, 1869, 2029, 2545, 3468 |
| BceAI | ACGGC | 2 cut(s) | 1781, 2313 |
| BciT130I | CCWGG | 5 cut(s) | 1081, 1872, 1960, 2165, 2419 |
| BcnI | CCSGG | 1 cut(s) | 1342 |
| BcoDI | GTCTC | 6 cut(s) | 1051, 1456, 1706, 2012, 2046, 3388 |
| BcuI | ACTAGT | 1 cut(s) | 2078 |
| BfmI | CTRYAG | 2 cut(s) | 433, 1758 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 747 |
| BglII | AGATCT | 1 cut(s) | 348 |
| BisI | GCNGC | 7 cut(s) | 1491, 1624, 1779, 1818, 2751, 3046, 3664 |
| BlpI | GCTNAGC | 1 cut(s) | 1457 |
| BlsI | GCNGC | 7 cut(s) | 1492, 1625, 1780, 1819, 2752, 3047, 3665 |
| BmcAI | AGTACT | 1 cut(s) | 3030 |
| Bme1390I | CCNGG | 6 cut(s) | 1081, 1342, 1872, 1960, 2165, 2419 |
| Bme18I | GGWCC | 4 cut(s) | 982, 1259, 1642, 2068 |
| BmeT110I | CYCGRG | 1 cut(s) | 2049 |
| BmgBI | CACGTC | 1 cut(s) | 322 |
| BmgT120I | GGNCC | 6 cut(s) | 982, 1259, 1513, 1642, 2068, 3748 |
| BmiI | GGNNCC | 4 cut(s) | 983, 1085, 1643, 2840 |
| BmrFI | CCNGG | 6 cut(s) | 1081, 1342, 1872, 1960, 2165, 2419 |
| BmrI | ACTGGG | 2 cut(s) | 1064, 1563 |
| BmsI | GCATC | 7 cut(s) | 611, 634, 976, 2737, 2837, 2854, 3459 |
| BmtI | GCTAGC | 1 cut(s) | 3804 |
| BmuI | ACTGGG | 2 cut(s) | 1064, 1563 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3400 |
| BpiI | GAAGAC | 1 cut(s) | 1976 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 485, 517 |
| BpmI | CTGGAG | 3 cut(s) | 555, 1102, 2401 |
| Bpu10I | CCTNAGC | 1 cut(s) | 615 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1457 |
| Bpu14I | TTCGAA | 1 cut(s) | 2516 |
| BpuEI | CTTGAG | 3 cut(s) | 1529, 2546, 3483 |
| BpuMI | CCSGG | 1 cut(s) | 1342 |
| Bsa29I | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2125 |
| BsaHI | GRCGYC | 1 cut(s) | 1906 |
| BsaJI | CCNNGG | 9 cut(s) | 1637, 1870, 1958, 2217, 2321, 2397, 2418, 3184, 3370 |
| BsaWI | WCCGGW | 2 cut(s) | 550, 1923 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2997, 3027 |
| Bse118I | RCCGGY | 1 cut(s) | 1075 |
| Bse1I | ACTGG | 7 cut(s) | 538, 769, 1059, 1306, 1558, 2380, 2638 |
| Bse3DI | GCAATG | 4 cut(s) | 1516, 1633, 2760, 3152 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2125 |
| BseAI | TCCGGA | 1 cut(s) | 550 |
| BseBI | CCWGG | 5 cut(s) | 1081, 1872, 1960, 2165, 2419 |
| BseCI | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| BseDI | CCNNGG | 9 cut(s) | 1637, 1870, 1958, 2217, 2321, 2397, 2418, 3184, 3370 |
| BseGI | GGATG | 9 cut(s) | 288, 904, 1599, 1661, 1859, 1866, 1880, 2092, 2428 |
| BseJI | GATNNNNATC | 1 cut(s) | 2125 |
| BseMI | GCAATG | 4 cut(s) | 1516, 1633, 2760, 3152 |
| BseMII | CTCAG | 4 cut(s) | 2846, 2870, 3201, 3690 |
| BseNI | ACTGG | 7 cut(s) | 538, 769, 1059, 1306, 1558, 2380, 2638 |
| BseXI | GCAGC | 4 cut(s) | 1502, 1765, 1804, 2762 |
| Bsh1236I | CGCG | 2 cut(s) | 442, 3666 |
| Bsh1285I | CGRYCG | 1 cut(s) | 523 |
| BshFI | GGCC | 5 cut(s) | 750, 1075, 1079, 1514, 3749 |
| BshVI | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| BsiEI | CGRYCG | 1 cut(s) | 523 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2049 |
| BsiSI | CCGG | 6 cut(s) | 551, 1076, 1341, 1359, 1924, 3805 |
| BslFI | GGGAC | 1 cut(s) | 995 |
| BsmAI | GTCTC | 6 cut(s) | 1051, 1456, 1706, 2012, 2046, 3388 |
| BsmFI | GGGAC | 1 cut(s) | 995 |
| BsmI | GAATGC | 3 cut(s) | 82, 908, 1599 |
| BsnI | GGCC | 5 cut(s) | 750, 1075, 1079, 1514, 3749 |
| BsoBI | CYCGRG | 1 cut(s) | 2049 |
| Bsp119I | TTCGAA | 1 cut(s) | 2516 |
| Bsp13I | TCCGGA | 1 cut(s) | 550 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1457 |
| Bsp19I | CCATGG | 2 cut(s) | 1637, 2321 |
| BspACI | CCGC | 9 cut(s) | 440, 1257, 1621, 1624, 1684, 1694, 2836, 3046, 3664 |
| BspANI | GGCC | 5 cut(s) | 750, 1075, 1079, 1514, 3749 |
| BspCNI | CTCAG | 4 cut(s) | 2845, 2869, 3202, 3689 |
| BspDI | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| BspEI | TCCGGA | 1 cut(s) | 550 |
| BspFNI | CGCG | 2 cut(s) | 442, 3666 |
| BspHI | TCATGA | 1 cut(s) | 2026 |
| BspLI | GGNNCC | 4 cut(s) | 983, 1085, 1643, 2840 |
| BspOI | GCTAGC | 1 cut(s) | 3804 |
| BspPI | GGATC | 5 cut(s) | 580, 2577, 2833, 2846, 2846 |
| BspT104I | TTCGAA | 1 cut(s) | 2516 |
| BsrBI | CCGCTC | 1 cut(s) | 1686 |
| BsrDI | GCAATG | 4 cut(s) | 1516, 1633, 2760, 3152 |
| BsrFI | RCCGGY | 1 cut(s) | 1075 |
| BsrI | ACTGG | 7 cut(s) | 538, 769, 1059, 1306, 1558, 2380, 2638 |
| BssAI | RCCGGY | 1 cut(s) | 1075 |
| BssECI | CCNNGG | 9 cut(s) | 1637, 1870, 1958, 2217, 2321, 2397, 2418, 3184, 3370 |
| BssNAI | GTATAC | 1 cut(s) | 2076 |
| BssNI | GRCGYC | 1 cut(s) | 1906 |
| BssSI | CACGAG | 1 cut(s) | 3398 |
| BssT1I | CCWWGG | 5 cut(s) | 1637, 2217, 2321, 3184, 3370 |
| Bst1107I | GTATAC | 1 cut(s) | 2076 |
| Bst2BI | CACGAG | 1 cut(s) | 3398 |
| Bst2UI | CCWGG | 5 cut(s) | 1081, 1872, 1960, 2165, 2419 |
| Bst6I | CTCTTC | 4 cut(s) | 1958, 3146, 3645, 3814 |
| BstACI | GRCGYC | 1 cut(s) | 1906 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1138, 3885 |
| BstBI | TTCGAA | 1 cut(s) | 2516 |
| BstC8I | GCNNGC | 9 cut(s) | 427, 612, 1077, 1148, 1670, 1830, 2869, 3802, 3857 |
| BstDSI | CCRYGG | 3 cut(s) | 1637, 2321, 2397 |
| BstEII | GGTNACC | 1 cut(s) | 2221 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1963 |
| BstF5I | GGATG | 9 cut(s) | 288, 904, 1599, 1661, 1859, 1866, 1880, 2092, 2428 |
| BstFNI | CGCG | 2 cut(s) | 442, 3666 |
| BstHHI | GCGC | 4 cut(s) | 2302, 2760, 3668, 3829 |
| BstMAI | GTCTC | 6 cut(s) | 1051, 1456, 1706, 2012, 2046, 3388 |
| BstMCI | CGRYCG | 1 cut(s) | 523 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 747, 1138, 1147, 3885 |
| BstNI | CCWGG | 5 cut(s) | 1081, 1872, 1960, 2165, 2419 |
| BstNSI | RCATGY | 8 cut(s) | 614, 1150, 1400, 1672, 1828, 2351, 2443, 3052 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3400 |
| BstPI | GGTNACC | 1 cut(s) | 2221 |
| BstSCI | CCNGG | 6 cut(s) | 1079, 1340, 1870, 1958, 2163, 2417 |
| BstSFI | CTRYAG | 2 cut(s) | 433, 1758 |
| BstUI | CGCG | 2 cut(s) | 442, 3666 |
| BstV1I | GCAGC | 4 cut(s) | 1502, 1765, 1804, 2762 |
| BstV2I | GAAGAC | 1 cut(s) | 1976 |
| BstX2I | RGATCY | 4 cut(s) | 348, 572, 2569, 2838 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 799 |
| BstYI | RGATCY | 4 cut(s) | 348, 572, 2569, 2838 |
| BstZ17I | GTATAC | 1 cut(s) | 2076 |
| Bsu15I | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| BsuRI | GGCC | 5 cut(s) | 750, 1075, 1079, 1514, 3749 |
| BsuTUI | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| BtgI | CCRYGG | 3 cut(s) | 1637, 2321, 2397 |
| BtgZI | GCGATG | 1 cut(s) | 3487 |
| BtrI | CACGTC | 1 cut(s) | 322 |
| BtsCI | GGATG | 9 cut(s) | 288, 904, 1599, 1661, 1859, 1866, 1880, 2092, 2428 |
| BtsIMutI | CAGTG | 2 cut(s) | 246, 1220 |
| Cac8I | GCNNGC | 9 cut(s) | 427, 612, 1077, 1148, 1670, 1830, 2869, 3802, 3857 |
| CciI | TCATGA | 1 cut(s) | 2026 |
| CfoI | GCGC | 4 cut(s) | 2302, 2760, 3668, 3829 |
| Cfr10I | RCCGGY | 1 cut(s) | 1075 |
| Cfr13I | GGNCC | 6 cut(s) | 982, 1259, 1513, 1642, 2068, 3748 |
| ClaI | ATCGAT | 4 cut(s) | 2119, 2129, 3246, 3409 |
| CseI | GACGC | 2 cut(s) | 1914, 2897 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1302, 2603 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1302, 2603 |
| EaeI | YGGCCR | 2 cut(s) | 748, 1073 |
| Eam1104I | CTCTTC | 4 cut(s) | 1958, 3146, 3645, 3814 |
| EarI | CTCTTC | 4 cut(s) | 1958, 3146, 3645, 3814 |
| Eco130I | CCWWGG | 5 cut(s) | 1637, 2217, 2321, 3184, 3370 |
| Eco47I | GGWCC | 4 cut(s) | 982, 1259, 1642, 2068 |
| Eco57I | CTGAAG | 3 cut(s) | 525, 2567, 2820 |
| Eco88I | CYCGRG | 1 cut(s) | 2049 |
| Eco91I | GGTNACC | 1 cut(s) | 2221 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1963 |
| EcoO109I | RGGNCCY | 2 cut(s) | 982, 1642 |
| EcoO65I | GGTNACC | 1 cut(s) | 2221 |
| EcoRII | CCWGG | 5 cut(s) | 1079, 1870, 1958, 2163, 2417 |
| EcoT14I | CCWWGG | 5 cut(s) | 1637, 2217, 2321, 3184, 3370 |
| EcoT22I | ATGCAT | 1 cut(s) | 3326 |
| ErhI | CCWWGG | 5 cut(s) | 1637, 2217, 2321, 3184, 3370 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 335, 367, 2702, 2734 |
| FaqI | GGGAC | 1 cut(s) | 995 |
| FauI | CCCGC | 2 cut(s) | 1628, 1687 |
| FauNDI | CATATG | 3 cut(s) | 594, 1068, 1308 |
| FblI | GTMKAC | 2 cut(s) | 2075, 3164 |
| Fnu4HI | GCNGC | 7 cut(s) | 1491, 1624, 1779, 1818, 2751, 3046, 3664 |
| FokI | GGATG | 9 cut(s) | 295, 911, 1606, 1668, 1853, 1866, 1887, 2099, 2435 |
| FseI | GGCCGGCC | 1 cut(s) | 1079 |
| Fsp4HI | GCNGC | 7 cut(s) | 1491, 1624, 1779, 1818, 2751, 3046, 3664 |
| GlaI | GCGC | 4 cut(s) | 2301, 2759, 3667, 3828 |
| GluI | GCNGC | 7 cut(s) | 1491, 1624, 1779, 1818, 2751, 3046, 3664 |
| GsuI | CTGGAG | 3 cut(s) | 555, 1102, 2401 |
| HaeIII | GGCC | 5 cut(s) | 750, 1075, 1079, 1514, 3749 |
| HapII | CCGG | 6 cut(s) | 551, 1076, 1341, 1359, 1924, 3805 |
| HgaI | GACGC | 2 cut(s) | 1914, 2897 |
| HhaI | GCGC | 4 cut(s) | 2302, 2760, 3668, 3829 |
| Hin1I | GRCGYC | 1 cut(s) | 1906 |
| Hin6I | GCGC | 4 cut(s) | 2300, 2758, 3666, 3827 |
| HinP1I | GCGC | 4 cut(s) | 2300, 2758, 3666, 3827 |
| HincII | GTYRAC | 5 cut(s) | 1750, 1864, 2494, 3089, 3868 |
| HindII | GTYRAC | 5 cut(s) | 1750, 1864, 2494, 3089, 3868 |
| HindIII | AAGCTT | 1 cut(s) | 2522 |
| HpaI | GTTAAC | 1 cut(s) | 1750 |
| HpaII | CCGG | 6 cut(s) | 551, 1076, 1341, 1359, 1924, 3805 |
| HphI | GGTGA | 5 cut(s) | 962, 1307, 1431, 2959, 3136 |
| Hpy99I | CGWCG | 2 cut(s) | 175, 1378 |
| HpyAV | CCTTC | 5 cut(s) | 241, 1646, 2596, 2795, 2957 |
| HpyCH4IV | ACGT | 9 cut(s) | 173, 321, 482, 1538, 1746, 1752, 1842, 2792, 3786 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 747, 1138, 1147, 3885 |
| HpySE526I | ACGT | 9 cut(s) | 173, 321, 482, 1538, 1746, 1752, 1842, 2792, 3786 |
| Hsp92I | GRCGYC | 1 cut(s) | 1906 |
| HspAI | GCGC | 4 cut(s) | 2300, 2758, 3666, 3827 |
| Kpn2I | TCCGGA | 1 cut(s) | 550 |
| KroI | GCCGGC | 1 cut(s) | 1075 |
| KroNI | GCCGGC | 1 cut(s) | 1077 |
| KspAI | GTTAAC | 1 cut(s) | 1750 |
| LmnI | GCTCC | 3 cut(s) | 434, 1083, 3279 |
| Lsp1109I | GCAGC | 4 cut(s) | 1502, 1765, 1804, 2762 |
| LweI | GCATC | 7 cut(s) | 611, 634, 976, 2737, 2837, 2854, 3459 |
| MaeII | ACGT | 9 cut(s) | 173, 321, 482, 1538, 1746, 1752, 1842, 2792, 3786 |
| MbiI | CCGCTC | 1 cut(s) | 1686 |
| MflI | RGATCY | 4 cut(s) | 348, 572, 2569, 2838 |
| MlyI | GAGTC | 4 cut(s) | 1195, 1869, 2958, 3390 |
| MmeI | TCCRAC | 5 cut(s) | 1270, 1873, 1895, 2866, 3924 |
| Mph1103I | ATGCAT | 1 cut(s) | 3326 |
| MroI | TCCGGA | 1 cut(s) | 550 |
| MroNI | GCCGGC | 1 cut(s) | 1075 |
| MroXI | GAANNNNTTC | 2 cut(s) | 350, 2406 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1592, 1707, 1983 |
| MspA1I | CMGCKG | 2 cut(s) | 1817, 2836 |
| MspI | CCGG | 6 cut(s) | 551, 1076, 1341, 1359, 1924, 3805 |
| MspR9I | CCNGG | 6 cut(s) | 1081, 1342, 1872, 1960, 2165, 2419 |
| Mva1269I | GAATGC | 3 cut(s) | 82, 908, 1599 |
| MvaI | CCWGG | 5 cut(s) | 1081, 1872, 1960, 2165, 2419 |
| MvnI | CGCG | 2 cut(s) | 442, 3666 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 747, 1138, 1147, 3885 |
| NaeI | GCCGGC | 1 cut(s) | 1077 |
| NciI | CCSGG | 1 cut(s) | 1342 |
| NcoI | CCATGG | 2 cut(s) | 1637, 2321 |
| NdeI | CATATG | 3 cut(s) | 594, 1068, 1308 |
| NgoMIV | GCCGGC | 1 cut(s) | 1075 |
| NheI | GCTAGC | 1 cut(s) | 3800 |
| NlaIV | GGNNCC | 4 cut(s) | 983, 1085, 1643, 2840 |
| NmuCI | GTSAC | 3 cut(s) | 56, 1700, 3787 |
| NsiI | ATGCAT | 1 cut(s) | 3326 |
| NspI | RCATGY | 8 cut(s) | 614, 1150, 1400, 1672, 1828, 2351, 2443, 3052 |
| NspV | TTCGAA | 1 cut(s) | 2516 |
| PaeI | GCATGC | 3 cut(s) | 614, 1150, 1672 |
| PagI | TCATGA | 1 cut(s) | 2026 |
| PciI | ACATGT | 1 cut(s) | 2347 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1007 |
| PctI | GAATGC | 3 cut(s) | 82, 908, 1599 |
| PdiI | GCCGGC | 1 cut(s) | 1077 |
| PdmI | GAANNNNTTC | 2 cut(s) | 350, 2406 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3371 |
| PfoI | TCCNGGA | 1 cut(s) | 1340 |
| PkrI | GCNGC | 7 cut(s) | 1492, 1625, 1780, 1819, 2752, 3047, 3665 |
| Ple19I | CGATCG | 1 cut(s) | 523 |
| PleI | GAGTC | 4 cut(s) | 1195, 1868, 2958, 3390 |
| PpsI | GAGTC | 4 cut(s) | 1195, 1868, 2958, 3390 |
| PpuMI | RGGWCCY | 2 cut(s) | 982, 1642 |
| PscI | ACATGT | 1 cut(s) | 2347 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3400 |
| PshBI | ATTAAT | 2 cut(s) | 2034, 3810 |
| PsiI | TTATAA | 3 cut(s) | 513, 1413, 2111 |
| Psp1406I | AACGTT | 2 cut(s) | 1746, 1752 |
| Psp5II | RGGWCCY | 2 cut(s) | 982, 1642 |
| Psp6I | CCWGG | 5 cut(s) | 1079, 1870, 1958, 2163, 2417 |
| PspEI | GGTNACC | 1 cut(s) | 2221 |
| PspGI | CCWGG | 5 cut(s) | 1079, 1870, 1958, 2163, 2417 |
| PspN4I | GGNNCC | 4 cut(s) | 983, 1085, 1643, 2840 |
| PspPI | GGNCC | 6 cut(s) | 982, 1259, 1513, 1642, 2068, 3748 |
| PspPPI | RGGWCCY | 2 cut(s) | 982, 1642 |
| PsuI | RGATCY | 4 cut(s) | 348, 572, 2569, 2838 |
| PvuI | CGATCG | 1 cut(s) | 523 |
| PvuII | CAGCTG | 1 cut(s) | 1817 |
| RigI | GGCCGGCC | 1 cut(s) | 1079 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1592, 1707, 1983 |
| SatI | GCNGC | 7 cut(s) | 1491, 1624, 1779, 1818, 2751, 3046, 3664 |
| Sau96I | GGNCC | 6 cut(s) | 982, 1259, 1513, 1642, 2068, 3748 |
| ScaI | AGTACT | 1 cut(s) | 3030 |
| SchI | GAGTC | 4 cut(s) | 1195, 1869, 2958, 3390 |
| ScrFI | CCNGG | 6 cut(s) | 1081, 1342, 1872, 1960, 2165, 2419 |
| SfaNI | GCATC | 7 cut(s) | 611, 634, 976, 2737, 2837, 2854, 3459 |
| SfcI | CTRYAG | 2 cut(s) | 433, 1758 |
| SfuI | TTCGAA | 1 cut(s) | 2516 |
| SinI | GGWCC | 4 cut(s) | 982, 1259, 1642, 2068 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1592, 1707, 1983 |
| SmlI | CTYRAG | 3 cut(s) | 1508, 2525, 3498 |
| SmoI | CTYRAG | 3 cut(s) | 1508, 2525, 3498 |
| SpeI | ACTAGT | 1 cut(s) | 2078 |
| SphI | GCATGC | 3 cut(s) | 614, 1150, 1672 |
| SsiI | CCGC | 9 cut(s) | 440, 1257, 1621, 1624, 1684, 1694, 2836, 3046, 3664 |
| SspI | AATATT | 3 cut(s) | 542, 724, 3837 |
| StyD4I | CCNGG | 6 cut(s) | 1079, 1340, 1870, 1958, 2163, 2417 |
| StyI | CCWWGG | 5 cut(s) | 1637, 2217, 2321, 3184, 3370 |
| TaiI | ACGT | 9 cut(s) | 176, 324, 485, 1541, 1749, 1755, 1845, 2795, 3789 |
| TatI | WGTACW | 5 cut(s) | 495, 2732, 3028, 3256, 3628 |
| TauI | GCSGC | 3 cut(s) | 1626, 3048, 3666 |
| TscAI | CASTG | 2 cut(s) | 246, 1220 |
| TseFI | GTSAC | 3 cut(s) | 56, 1700, 3787 |
| TseI | GCWGC | 4 cut(s) | 1490, 1778, 1817, 2750 |
| Tsp45I | GTSAC | 3 cut(s) | 56, 1700, 3787 |
| TspGWI | ACGGA | 2 cut(s) | 2414, 3104 |
| TspRI | CASTG | 2 cut(s) | 246, 1220 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3371 |
| VpaK11BI | GGWCC | 4 cut(s) | 982, 1259, 1642, 2068 |
| VspI | ATTAAT | 2 cut(s) | 2034, 3810 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1963 |
| XceI | RCATGY | 8 cut(s) | 614, 1150, 1400, 1672, 1828, 2351, 2443, 3052 |
| XmiI | GTMKAC | 2 cut(s) | 2075, 3164 |
| XmnI | GAANNNNTTC | 2 cut(s) | 350, 2406 |
| ZrmI | AGTACT | 1 cut(s) | 3030 |
| Zsp2I | ATGCAT | 1 cut(s) | 3326 |