Rroxscaffold_176G00431610

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000176
OG0009651
Physical Location & Seq
Forward (+)
1467266 .. 1469905
2640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_176G00431610.1

Sequence Viewer

Length: 1500 bp
ATGAAAAATCTCGAATCCTCGAATCACCCAATCCCCAATTCACTCCCAACCGATAAAATGGTCACCGGCGCCGGAGCAGCCTCCTCCAAGAAGCGCCAACGCGCCGTTCACGCCGCCAACTTAACCGCCTCCACCACCTCCTCCTCCTCCACCCGCTCCTCCGCTTCCATCGTCCTCGACATACCCGGCCCCAACCCGATCCACAGACCCCACGACCCTTCCCTCCCTTCCTTCAACGACGTCGCTTCCGCTGACGTCATCCTCCGCCTCTCCGTCGACCCTACCCTCTCAGACCTAACCTCAGATCACTCCCCCGACGACGTCGTTCTGTACCTCCACGCCGCCTGCCTCCGCCGCTGCAAATACTTCGCCGCGCTCTTGTCCGACCGATGGCAGCATCGGAACCAAGACGGCCAGGACGACGTCGTCTCGGCAGCGCCGTATCGGATCAGCCTGGAAGTCCCGCCGGCCCCCGGAGCCATCGAGACCCGCATTTCCGTGCTGCGGCTTCTCTACAGCGACGACGACGATTTCGCCTCCACTATAAACACCGCGGCGGCGGCGATCGAGCTCCTCCCGGTGGCCTTGGAGCTTCTCTTCGAGGACTGCGTGCGGCGCTGCGTCCAGTTCCTCGAGGCCGTGCCGTGGACGGAGGAGGAGGAGAGTCGCGTCCTAGCTCTGGTCCCTTTTTTGAGCGAAGACGAATCGAAGGACCTCCTGGCTAGGGTTTCGGGGACGAACAATTCCAGCGAGGAAATGCTGTATGGTCTGATCACCTCCGTGATTCACAATCCGAACATGGCGTACGTCAAGGCGTTTGTGGCCAAGCTGCTGAGGGAGTTCTCCGCCAGGGGCTCGGCGGAGCGAGTTCTGGAGAGGGCGTTTCAGAGCACCTTCAAGGTGGTCAAGGAGTCCATGGAGGACTACACCAGGCCCGGAGTGAGGGGAGACCACAATGAGACTGAGGCTATCCAGAGGCTGAATTTGCATACGGCTATGACCAATGGGAGGCACCTGCTGTGGCTGGTGGAGAGGATGGTTGAGCTCAGGGTGGCTGATGCCGCGGTCAAGGCTTGGAGCGAGCAGCCATCGTTTACTGCGGATTTGCAGAGGGCGTTTCGTGACGATGCGTGGAGGAATATAGTGCCTGGCCTGCCTGGTGTGTTGCTTCGCTGCACTGCCAAGCTTTCGAGTGCAATTGCTTCCGGTACCATTTTGGTTGCTGCTCAGGTTAGGAAGAAGCTTGTAAATGATTGGCTTCCGGTTCTGATTGTATGCAAAGACAATACATCACCTTTGACGCCAAATAACAGACCCTTATACCTGGACCTGGAAGAGACATTCCTCAAAATCATCTCTACACTGCCGATGTTAGATGCAAAAGAGTTGTTGCAGCAGTGCCTTGTCTTCTCAACCCGAAATTTTGATGATTGCCCGCATTTGGTCATGGCTTTCAACACCTGGTTCCGCCGTGCTGCTCGACCCCCTCAAGGAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

499

Amino Acids

55.33

Weight (kDa)

5.89

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 296 - 492 8e-10 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1023
AasI GACNNNNNNGTC 1 cut(s) 425
AatII GACGTC 4 cut(s) 243, 258, 324, 426
AbsI CCTCGAGG 1 cut(s) 632
Acc36I ACCTGC 1 cut(s) 1023
Acc65I GGTACC 1 cut(s) 1208
AccB1I GGYRCC 3 cut(s) 68, 1011, 1208
AccBSI CCGCTC 1 cut(s) 156
AccI GTMKAC 1 cut(s) 276
AccII CGCG 5 cut(s) 102, 374, 554, 669, 1064
AclWI GGATC 2 cut(s) 193, 455
AcoI YGGCCR 2 cut(s) 412, 822
AcsI RAATTY 2 cut(s) 982, 1420
AcyI GRCGYC 6 cut(s) 69, 240, 255, 321, 423, 1301
AfaI GTAC 3 cut(s) 332, 806, 1210
AgsI TTSAA 3 cut(s) 235, 898, 1456
AjuI GAANNNNNNNTTGG 4 cut(s) 22, 54, 90, 122
AleI CACNNNNGTG 1 cut(s) 779
AluBI AGCT 7 cut(s) 571, 592, 677, 829, 1045, 1186, 1243
AluI AGCT 7 cut(s) 571, 592, 677, 829, 1045, 1186, 1243
Alw21I GWGCWC 3 cut(s) 573, 893, 1047
Alw26I GTCTC 5 cut(s) 433, 479, 942, 953, 1331
AlwI GGATC 2 cut(s) 193, 455
AlwNI CAGNNNCTG 1 cut(s) 979
Ama87I CYCGRG 1 cut(s) 632
AoxI GGCC 8 cut(s) 187, 412, 468, 582, 636, 822, 932, 1150
ApoI RAATTY 2 cut(s) 982, 1420
ArsI GACNNNNNNTTYG 2 cut(s) 515, 547
Asp718I GGTACC 1 cut(s) 1208
AspLEI GCGC 6 cut(s) 71, 96, 104, 376, 439, 618
AspS9I GGNCC 6 cut(s) 188, 469, 682, 712, 933, 1327
AsuC2I CCSGG 4 cut(s) 186, 474, 578, 936
AsuHPI GGTGA 4 cut(s) 17, 55, 766, 1284
AvaI CYCGRG 1 cut(s) 632
AvaII GGWCC 3 cut(s) 682, 712, 1327
BalI TGGCCA 1 cut(s) 824
BanI GGYRCC 3 cut(s) 68, 1011, 1208
BanII GRGCYC 3 cut(s) 573, 857, 1047
BbsI GAAGAC 2 cut(s) 705, 1399
Bbv12I GWGCWC 3 cut(s) 573, 893, 1047
BbvCI CCTCAGC 1 cut(s) 833
BccI CCATC 5 cut(s) 176, 384, 488, 1030, 1096
BceAI ACGGC 7 cut(s) 89, 424, 427, 623, 628, 1008, 1455
BcgI CGANNNNNNTGC 2 cut(s) 349, 383
BclI TGATCA 1 cut(s) 771
BcnI CCSGG 4 cut(s) 186, 474, 578, 936
BcoDI GTCTC 5 cut(s) 433, 479, 942, 953, 1331
BfaI CTAG 3 cut(s) 674, 723, 1498
BfmI CTRYAG 1 cut(s) 514
BfoI RGCGCY 4 cut(s) 72, 97, 440, 619
BfuAI ACCTGC 1 cut(s) 1023
Bme18I GGWCC 3 cut(s) 682, 712, 1327
BmeT110I CYCGRG 1 cut(s) 632
BmgT120I GGNCC 6 cut(s) 188, 469, 682, 712, 933, 1327
BmiI GGNNCC 9 cut(s) 70, 190, 404, 471, 478, 684, 1013, 1210, 1466
BmsI GCATC 4 cut(s) 406, 1048, 1117, 1366
BpiI GAAGAC 2 cut(s) 705, 1399
BpmI CTGGAG 1 cut(s) 893
Bpu10I CCTNAGC 3 cut(s) 833, 1046, 1227
BpuEI CTTGAG 1 cut(s) 1473
BpuMI CCSGG 4 cut(s) 186, 474, 578, 936
BsaHI GRCGYC 6 cut(s) 69, 240, 255, 321, 423, 1301
BsaI GGTCTC 2 cut(s) 479, 942
BsaJI CCNNGG 7 cut(s) 472, 552, 585, 644, 849, 915, 1062
BsaWI WCCGGW 2 cut(s) 1205, 1261
BsaXI ACNNNNNCTCC 2 cut(s) 866, 896
Bse118I RCCGGY 2 cut(s) 65, 466
Bse1I ACTGG 1 cut(s) 625
BseDI CCNNGG 7 cut(s) 472, 552, 585, 644, 849, 915, 1062
BseGI GGATG 2 cut(s) 258, 1041
BseMII CTCAG 6 cut(s) 303, 315, 824, 954, 1060, 1241
BseNI ACTGG 1 cut(s) 625
BseRI GAGGAG 9 cut(s) 73, 130, 133, 136, 148, 563, 668, 671, 674
BsgI GTGCAG 1 cut(s) 1159
Bsh1236I CGCG 5 cut(s) 102, 374, 554, 669, 1064
Bsh1285I CGRYCG 2 cut(s) 388, 567
BshFI GGCC 8 cut(s) 189, 414, 470, 584, 638, 824, 934, 1152
BshNI GGYRCC 3 cut(s) 68, 1011, 1208
BsiEI CGRYCG 2 cut(s) 388, 567
BsiHKAI GWGCWC 3 cut(s) 573, 893, 1047
BsiHKCI CYCGRG 1 cut(s) 632
BsiSI CCGG 9 cut(s) 66, 72, 186, 467, 474, 578, 936, 1206, 1262
BsiWI CGTACG 1 cut(s) 804
BslFI GGGAC 3 cut(s) 446, 668, 748
BsmAI GTCTC 5 cut(s) 433, 479, 942, 953, 1331
BsmBI CGTCTC 1 cut(s) 433
BsmFI GGGAC 3 cut(s) 446, 668, 748
BsnI GGCC 8 cut(s) 189, 414, 470, 584, 638, 824, 934, 1152
Bso31I GGTCTC 2 cut(s) 479, 942
BsoBI CYCGRG 1 cut(s) 632
Bsp1286I GDGCHC 4 cut(s) 573, 857, 893, 1047
Bsp143I GATC 5 cut(s) 198, 304, 447, 564, 771
Bsp19I CCATGG 1 cut(s) 915
BspANI GGCC 8 cut(s) 189, 414, 470, 584, 638, 824, 934, 1152
BspCNI CTCAG 6 cut(s) 302, 314, 825, 955, 1059, 1240
BspFNI CGCG 5 cut(s) 102, 374, 554, 669, 1064
BspLI GGNNCC 9 cut(s) 70, 190, 404, 471, 478, 684, 1013, 1210, 1466
BspMI ACCTGC 1 cut(s) 1023
BspPI GGATC 2 cut(s) 193, 455
BspT107I GGYRCC 3 cut(s) 68, 1011, 1208
BspTNI GGTCTC 2 cut(s) 479, 942
BsrBI CCGCTC 1 cut(s) 156
BsrFI RCCGGY 2 cut(s) 65, 466
BsrI ACTGG 1 cut(s) 625
BssAI RCCGGY 2 cut(s) 65, 466
BssECI CCNNGG 7 cut(s) 472, 552, 585, 644, 849, 915, 1062
BssMI GATC 5 cut(s) 198, 304, 447, 564, 771
BssNI GRCGYC 6 cut(s) 69, 240, 255, 321, 423, 1301
BssT1I CCWWGG 2 cut(s) 585, 915
Bst6I CTCTTC 2 cut(s) 602, 1329
BstACI GRCGYC 6 cut(s) 69, 240, 255, 321, 423, 1301
BstC8I GCNNGC 6 cut(s) 346, 468, 611, 1082, 1154, 1436
BstDEI CTNAG 6 cut(s) 289, 301, 833, 963, 1046, 1227
BstDSI CCRYGG 4 cut(s) 552, 644, 915, 1062
BstEII GGTNACC 1 cut(s) 61
BstF5I GGATG 2 cut(s) 258, 1041
BstFNI CGCG 5 cut(s) 102, 374, 554, 669, 1064
BstH2I RGCGCY 4 cut(s) 72, 97, 440, 619
BstHHI GCGC 6 cut(s) 71, 96, 104, 376, 439, 618
BstKTI GATC 5 cut(s) 201, 307, 450, 567, 774
BstMAI GTCTC 5 cut(s) 433, 479, 942, 953, 1331
BstMBI GATC 5 cut(s) 198, 304, 447, 564, 771
BstMCI CGRYCG 2 cut(s) 388, 567
BstPI GGTNACC 1 cut(s) 61
BstSFI CTRYAG 1 cut(s) 514
BstUI CGCG 5 cut(s) 102, 374, 554, 669, 1064
BstV2I GAAGAC 2 cut(s) 705, 1399
BsuRI GGCC 8 cut(s) 189, 414, 470, 584, 638, 824, 934, 1152
BtgI CCRYGG 4 cut(s) 552, 644, 915, 1062
BtsCI GGATG 2 cut(s) 258, 1041
BtsI GCAGTG 3 cut(s) 1176, 1361, 1403
BtsIMutI CAGTG 3 cut(s) 1176, 1361, 1403
BveI ACCTGC 1 cut(s) 1023
Cac8I GCNNGC 6 cut(s) 346, 468, 611, 1082, 1154, 1436
CaiI CAGNNNCTG 1 cut(s) 979
CfoI GCGC 6 cut(s) 71, 96, 104, 376, 439, 618
Cfr10I RCCGGY 2 cut(s) 65, 466
Cfr13I GGNCC 6 cut(s) 188, 469, 682, 712, 933, 1327
Cfr42I CCGCGG 2 cut(s) 555, 1065
CseI GACGC 3 cut(s) 610, 658, 1309
CsiI ACCWGGT 1 cut(s) 1460
Csp6I GTAC 3 cut(s) 331, 805, 1209
CviAII CATG 3 cut(s) 799, 916, 1447
CviQI GTAC 3 cut(s) 331, 805, 1209
DdeI CTNAG 6 cut(s) 289, 301, 833, 963, 1046, 1227
DinI GGCGCC 1 cut(s) 70
DpnI GATC 5 cut(s) 200, 306, 449, 566, 773
DpnII GATC 5 cut(s) 198, 304, 447, 564, 771
DrdI GACNNNNNNGTC 1 cut(s) 425
DseDI GACNNNNNNGTC 1 cut(s) 425
EaeI YGGCCR 2 cut(s) 412, 822
Eam1104I CTCTTC 2 cut(s) 602, 1329
EarI CTCTTC 2 cut(s) 602, 1329
EciI GGCGGA 5 cut(s) 254, 341, 835, 875, 1457
Ecl136II GAGCTC 2 cut(s) 571, 1045
Eco130I CCWWGG 2 cut(s) 585, 915
Eco24I GRGCYC 3 cut(s) 573, 857, 1047
Eco31I GGTCTC 2 cut(s) 479, 942
Eco47I GGWCC 3 cut(s) 682, 712, 1327
Eco53kI GAGCTC 2 cut(s) 571, 1045
Eco88I CYCGRG 1 cut(s) 632
Eco91I GGTNACC 1 cut(s) 61
EcoICRI GAGCTC 2 cut(s) 571, 1045
EcoO109I RGGNCCY 1 cut(s) 712
EcoO65I GGTNACC 1 cut(s) 61
EcoT14I CCWWGG 2 cut(s) 585, 915
EcoT38I GRGCYC 3 cut(s) 573, 857, 1047
EgeI GGCGCC 1 cut(s) 70
EheI GGCGCC 1 cut(s) 70
ErhI CCWWGG 2 cut(s) 585, 915
Esp3I CGTCTC 1 cut(s) 433
FaeI CATG 3 cut(s) 802, 919, 1450
FaqI GGGAC 3 cut(s) 446, 668, 748
FatI CATG 3 cut(s) 798, 915, 1446
FauI CCCGC 4 cut(s) 161, 471, 497, 1443
FbaI TGATCA 1 cut(s) 771
FblI GTMKAC 1 cut(s) 276
FokI GGATG 2 cut(s) 245, 1048
FriOI GRGCYC 3 cut(s) 573, 857, 1047
FspBI CTAG 3 cut(s) 674, 723, 1498
GlaI GCGC 6 cut(s) 70, 95, 103, 375, 438, 617
GsuI CTGGAG 1 cut(s) 893
HaeII RGCGCY 4 cut(s) 72, 97, 440, 619
HaeIII GGCC 8 cut(s) 189, 414, 470, 584, 638, 824, 934, 1152
HapII CCGG 9 cut(s) 66, 72, 186, 467, 474, 578, 936, 1206, 1262
HgaI GACGC 3 cut(s) 610, 658, 1309
HhaI GCGC 6 cut(s) 71, 96, 104, 376, 439, 618
Hin1I GRCGYC 6 cut(s) 69, 240, 255, 321, 423, 1301
Hin1II CATG 3 cut(s) 802, 919, 1450
Hin6I GCGC 6 cut(s) 69, 94, 102, 374, 437, 616
HinP1I GCGC 6 cut(s) 69, 94, 102, 374, 437, 616
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 2 cut(s) 1184, 1241
HinfI GANTC 7 cut(s) 14, 22, 664, 704, 784, 911, 1494
HpaII CCGG 9 cut(s) 66, 72, 186, 467, 474, 578, 936, 1206, 1262
HphI GGTGA 4 cut(s) 17, 55, 766, 1284
Hpy166II GTNNAC 4 cut(s) 109, 277, 648, 1095
Hpy188I TCNGA 9 cut(s) 292, 304, 385, 402, 447, 771, 795, 888, 1269
Hpy188III TCNNGA 5 cut(s) 11, 484, 872, 973, 1121
Hpy8I GTNNAC 4 cut(s) 109, 277, 648, 1095
HpyAV CCTTC 5 cut(s) 228, 237, 241, 703, 904
HpyCH4IV ACGT 5 cut(s) 240, 255, 321, 423, 807
HpyCH4V TGCA 8 cut(s) 360, 988, 1108, 1176, 1196, 1278, 1379, 1393
HpyF3I CTNAG 6 cut(s) 289, 301, 833, 963, 1046, 1227
HpySE526I ACGT 5 cut(s) 240, 255, 321, 423, 807
Hsp92I GRCGYC 6 cut(s) 69, 240, 255, 321, 423, 1301
Hsp92II CATG 3 cut(s) 802, 919, 1450
HspAI GCGC 6 cut(s) 69, 94, 102, 374, 437, 616
KasI GGCGCC 1 cut(s) 68
KpnI GGTACC 1 cut(s) 1212
KroI GCCGGC 1 cut(s) 466
KroNI GCCGGC 1 cut(s) 468
Ksp22I TGATCA 1 cut(s) 771
KspI CCGCGG 2 cut(s) 555, 1065
Kzo9I GATC 5 cut(s) 198, 304, 447, 564, 771
LmnI GCTCC 7 cut(s) 74, 161, 476, 576, 589, 862, 1077
LweI GCATC 4 cut(s) 406, 1048, 1117, 1366
MabI ACCWGGT 1 cut(s) 1460
MaeI CTAG 3 cut(s) 674, 723, 1498
MaeII ACGT 5 cut(s) 240, 255, 321, 423, 807
MaeIII GTNAC 2 cut(s) 61, 1121
MalI GATC 5 cut(s) 200, 306, 449, 566, 773
MbiI CCGCTC 1 cut(s) 156
MboI GATC 5 cut(s) 198, 304, 447, 564, 771
MboII GAAGA 5 cut(s) 589, 710, 1249, 1346, 1399
MfeI CAATTG 1 cut(s) 1197
MhlI GDGCHC 4 cut(s) 573, 857, 893, 1047
MlsI TGGCCA 1 cut(s) 824
MluCI AATT 5 cut(s) 37, 742, 982, 1197, 1420
MluNI TGGCCA 1 cut(s) 824
Mly113I GGCGCC 1 cut(s) 69
MlyI GAGTC 2 cut(s) 673, 920
MmeI TCCRAC 1 cut(s) 408
Mox20I TGGCCA 1 cut(s) 824
MroNI GCCGGC 1 cut(s) 466
MscI TGGCCA 1 cut(s) 824
MseI TTAA 1 cut(s) 122
MslI CAYNNNNRTG 2 cut(s) 497, 779
Msp20I TGGCCA 1 cut(s) 824
MspA1I CMGCKG 4 cut(s) 251, 357, 554, 1064
MspI CCGG 9 cut(s) 66, 72, 186, 467, 474, 578, 936, 1206, 1262
MunI CAATTG 1 cut(s) 1197
MvnI CGCG 5 cut(s) 102, 374, 554, 669, 1064
NaeI GCCGGC 1 cut(s) 468
NarI GGCGCC 1 cut(s) 69
NciI CCSGG 4 cut(s) 186, 474, 578, 936
NcoI CCATGG 1 cut(s) 915
NdeII GATC 5 cut(s) 198, 304, 447, 564, 771
NgoMIV GCCGGC 1 cut(s) 466
NlaIII CATG 3 cut(s) 802, 919, 1450
NlaIV GGNNCC 9 cut(s) 70, 190, 404, 471, 478, 684, 1013, 1210, 1466
NmeAIII GCCGAG 2 cut(s) 410, 836
NmuCI GTSAC 2 cut(s) 61, 1121
OliI CACNNNNGTG 1 cut(s) 779
PaeR7I CTCGAG 1 cut(s) 632
PaqCI CACCTGC 1 cut(s) 1023
PcsI WCGNNNNNNNCGW 3 cut(s) 417, 437, 606
PdiI GCCGGC 1 cut(s) 468
PfeI GAWTC 5 cut(s) 14, 22, 704, 784, 1494
Pfl23II CGTACG 1 cut(s) 804
PflFI GACNNNGTC 3 cut(s) 320, 422, 425
Ple19I CGATCG 1 cut(s) 567
PleI GAGTC 2 cut(s) 672, 919
PluTI GGCGCC 1 cut(s) 72
PpsI GAGTC 2 cut(s) 672, 919
PpuMI RGGWCCY 1 cut(s) 712
Psp124BI GAGCTC 2 cut(s) 573, 1047
Psp5II RGGWCCY 1 cut(s) 712
PspEI GGTNACC 1 cut(s) 61
PspLI CGTACG 1 cut(s) 804
PspN4I GGNNCC 9 cut(s) 70, 190, 404, 471, 478, 684, 1013, 1210, 1466
PspPI GGNCC 6 cut(s) 188, 469, 682, 712, 933, 1327
PspPPI RGGWCCY 1 cut(s) 712
PspXI VCTCGAGB 1 cut(s) 632
PsrI GAACNNNNNNTAC 2 cut(s) 788, 820
PstNI CAGNNNCTG 1 cut(s) 979
PsyI GACNNNGTC 3 cut(s) 320, 422, 425
PvuI CGATCG 1 cut(s) 567
RsaI GTAC 3 cut(s) 332, 806, 1210
RsaNI GTAC 3 cut(s) 331, 805, 1209
RseI CAYNNNNRTG 2 cut(s) 497, 779
SacI GAGCTC 2 cut(s) 573, 1047
SacII CCGCGG 2 cut(s) 555, 1065
SalI GTCGAC 1 cut(s) 275
SaqAI TTAA 1 cut(s) 122
Sau3AI GATC 5 cut(s) 198, 304, 447, 564, 771
Sau96I GGNCC 6 cut(s) 188, 469, 682, 712, 933, 1327
SchI GAGTC 2 cut(s) 673, 920
SduI GDGCHC 4 cut(s) 573, 857, 893, 1047
SexAI ACCWGGT 1 cut(s) 1460
SfaNI GCATC 4 cut(s) 406, 1048, 1117, 1366
SfcI CTRYAG 1 cut(s) 514
SfoI GGCGCC 1 cut(s) 70
Sfr274I CTCGAG 1 cut(s) 632
Sfr303I CCGCGG 2 cut(s) 555, 1065
SgrAI CRCCGGYG 1 cut(s) 65
SgrBI CCGCGG 2 cut(s) 555, 1065
SinI GGWCC 3 cut(s) 682, 712, 1327
SlaI CTCGAG 1 cut(s) 632
SmiMI CAYNNNNRTG 2 cut(s) 497, 779
SmlI CTYRAG 2 cut(s) 632, 1488
SmoI CTYRAG 2 cut(s) 632, 1488
Sse9I AATT 5 cut(s) 37, 742, 982, 1197, 1420
SspDI GGCGCC 1 cut(s) 68
SspMI CTAG 3 cut(s) 674, 723, 1498
SstI GAGCTC 2 cut(s) 573, 1047
StyI CCWWGG 2 cut(s) 585, 915
TaiI ACGT 5 cut(s) 243, 258, 324, 426, 810
TaqII GACCGA 1 cut(s) 402
TasI AATT 5 cut(s) 37, 742, 982, 1197, 1420
TfiI GAWTC 5 cut(s) 14, 22, 704, 784, 1494
Tru1I TTAA 1 cut(s) 122
Tru9I TTAA 1 cut(s) 122
TscAI CASTG 3 cut(s) 1183, 1368, 1403
TseFI GTSAC 2 cut(s) 61, 1121
Tsp45I GTSAC 2 cut(s) 61, 1121
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 4 cut(s) 262, 487, 665, 769
TspRI CASTG 3 cut(s) 1183, 1368, 1403
Tth111I GACNNNGTC 3 cut(s) 320, 422, 425
VpaK11BI GGWCC 3 cut(s) 682, 712, 1327
XapI RAATTY 2 cut(s) 982, 1420
XhoI CTCGAG 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 276
XspI CTAG 3 cut(s) 674, 723, 1498
ZraI GACGTC 4 cut(s) 241, 256, 322, 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.