pycom01g19750

65-kDa microtubule-associated protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
18318488 .. 18321286
2799 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g19750.7

Sequence Viewer

Length: 1686 bp
ATGGAAACAACATGTGGATCACTTCTGTATGAACTTCAGATAATTTGGAATGAAGTCGGAGAGTCTGACAAAGATAGGGATAAGATGTTGCTCGAGCTTGAGCAGGAGTGTCTAGAAGTATACAGAAGAAAAGTTGACAAGGCAAATCGGTGTAGGGCACAGCTACGGCAGGCAATTGCTGATTCCGAAGCAGAACTTGCAGCAATCTGCTCTGCAATGGGGGAGCGACCGGTACATATTAGGCAGTCTGATCAAAATGCCGGAAGTTTGAAAGAAGAGCTCAGCAAAATAATTCCACAGTTGGAGGAGATGAAGAAAAGAAAATACGACAGGAAAAATAACTTTCTGGAAGTTCTAGAGGAGATACAGAAAATTTCAAGTGAGATTAATGGAAGCACAGATTACAGTTCATCTATACCGGCTGTGGATGAAACTGATTTATCATTGAGAAGGCTTGAAGAATTGCAGAGACATCTACATGGACTCCAAACTGAGAAGAGTGATAGGCTTAAGCAGATACAGGACCACCTGTGTACATTGAACTCACTTTGCTCGGTTCTTGGTATGGACTACAAACAGACAATTAGTGAGGTTCATCCCAGTTTAGTTGATTCAGAAGGAAGCAAGAATATAAGTAATGATACAATTCAGCGGTTGGCTGCTGCAATACAAAAATTGCGGGAGGTTAAATTACAGAGAATGCAGAGGCTTCAAGATCTGGCAACTACCATGTTAGAGCTGTGGAACTTGATGGATACGCCAATTGAGGAGCAACAGATGTTTCAGAATATAACCTGCAATATTGCTGCTTCAGAACATGAGATAACTGAACCAAATACACTCTCTGTGGACTTCATCAATTATGTTGAGGCAGAAGTGTCTCGGTTGGAAGAGTTGAAATCAAGTAAAATGAAAGAGCTTGTTCTTAAGAAGAGGTCAGAGCTAGAGGAAATCTGTAGAAAGACACATATGGTCCTTGAAGCAGATAGTGCAATTGACTACGTAATTGCAGCTATAGAGTCAGGAGATGTGGACCATGCTTGTGTCCTCGATCAAATTGAGCTTCAGGTTGCAAAGGTTAAAGAGGAAGCTTTTAGCAGGAAAGACATACTTGAAAGAGTTGAGAAGTGGTTGTTTGCTTGTGATGAGGAGTGCTGGCTCGAAGAGTATAACAGGGATGAAAACCGATACAATGCTGGAAGAGGAGCTCATCTTACTCTCAAGCGTGCTGAGAAAGCACGTGCTTTGGTTAATAAACTTCCAGCAATGGTGGAAGCATTGGCTTCAAAAACCATATCATGGGAGAAGGAGAGGGGCATTGAGTTCACTTATGATGGTATTCGTCTTCTTTCCATGCTTGAAGAGTATACTATATTACGGGAGGAGAAGGAGCAGGAACGTCGAAGACAGCGGGACCAGAAAAAGATTCAGGGTCAGTTGATAGCTGAGCAAGAGGTACTTTATGGGTCAAAACCAAGTCCTTCAAAACCTCAGAGTGTAAAGAAGGCTCCGAGAATGTCAACTGGAGGTGCAAGCAATAGAAGACTTTCAATGCAAGCTCCTAAACCCGATCCACTTCACTCCATCAAAGGTACTCCGCGTTCAAGAAAGAGTGACCGAGTGAATCCAAATGAGCAATTAAACAATCATCTGGATGATGGCTTTTCATCTTTGTCCACAGGTTAA

Protein Analysis

562

Amino Acids

64.35

Weight (kDa)

5.49

Isoelectric Point (pI)

56.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 803
AccB7I CCANNNNNTGG 1 cut(s) 1299
AccI GTMKAC 2 cut(s) 120, 1367
AccII CGCG 1 cut(s) 1600
AciI CCGC 4 cut(s) 652, 679, 1411, 1598
AclWI GGATC 2 cut(s) 25, 1565
AcsI RAATTY 1 cut(s) 372
AcuI CTGAAG 3 cut(s) 20, 795, 1049
AcvI CACGTG 1 cut(s) 1241
AfaI GTAC 4 cut(s) 234, 535, 1458, 1594
AfiI CCNNNNNNNGG 1 cut(s) 1299
AflII CTTAAG 2 cut(s) 509, 926
AflIII ACRYGT 1 cut(s) 11
AgeI ACCGGT 1 cut(s) 229
Alw21I GWGCWC 2 cut(s) 282, 1210
Alw26I GTCTC 2 cut(s) 463, 885
AlwI GGATC 2 cut(s) 25, 1565
Ama87I CYCGRG 1 cut(s) 92
ApeKI GCWGC 5 cut(s) 200, 659, 662, 806, 1010
ApoI RAATTY 1 cut(s) 372
AseI ATTAAT 1 cut(s) 387
AsiGI ACCGGT 1 cut(s) 229
Asp700I GAANNNNTTC 1 cut(s) 1546
AspS9I GGNCC 4 cut(s) 523, 973, 1033, 1414
AvaI CYCGRG 1 cut(s) 92
AvaII GGWCC 4 cut(s) 523, 973, 1033, 1414
BaeGI GKGCMC 1 cut(s) 160
BanII GRGCYC 2 cut(s) 282, 1210
BbrPI CACGTG 1 cut(s) 1241
BbsI GAAGAC 3 cut(s) 1337, 1411, 1549
Bbv12I GWGCWC 2 cut(s) 282, 1210
BbvI GCAGC 5 cut(s) 212, 646, 649, 793, 1022
BccI CCATC 4 cut(s) 745, 1328, 1592, 1652
BceAI ACGGC 1 cut(s) 182
BcgI CGANNNNNNTGC 2 cut(s) 1382, 1416
BciVI GTATCC 1 cut(s) 748
BclI TGATCA 1 cut(s) 250
BcoDI GTCTC 2 cut(s) 463, 885
BfaI CTAG 3 cut(s) 113, 356, 944
BfmI CTRYAG 2 cut(s) 955, 1014
BfrI CTTAAG 2 cut(s) 509, 926
BfuAI ACCTGC 1 cut(s) 803
BfuI GTATCC 1 cut(s) 748
BglII AGATCT 1 cut(s) 715
BisI GCNGC 5 cut(s) 201, 660, 663, 807, 1011
BlpI GCTNAGC 2 cut(s) 281, 1446
BlsI GCNGC 5 cut(s) 202, 661, 664, 808, 1012
Bme18I GGWCC 4 cut(s) 523, 973, 1033, 1414
BmeT110I CYCGRG 1 cut(s) 92
BmgT120I GGNCC 4 cut(s) 523, 973, 1033, 1414
BmiI GGNNCC 2 cut(s) 1415, 1509
BmrI ACTGGG 1 cut(s) 594
BmuI ACTGGG 1 cut(s) 594
BpiI GAAGAC 3 cut(s) 1337, 1411, 1549
BpmI CTGGAG 1 cut(s) 1545
Bpu1102I GCTNAGC 2 cut(s) 281, 1446
BpuEI CTTGAG 2 cut(s) 119, 1205
BsaAI YACGTR 2 cut(s) 1003, 1241
BsaWI WCCGGW 1 cut(s) 229
BsaXI ACNNNNNCTCC 2 cut(s) 468, 498
Bsc4I CCNNNNNNNGG 1 cut(s) 1299
Bse118I RCCGGY 2 cut(s) 229, 418
Bse1I ACTGG 2 cut(s) 600, 1528
Bse3DI GCAATG 2 cut(s) 222, 1272
BseGI GGATG 4 cut(s) 433, 595, 1183, 1660
BseLI CCNNNNNNNGG 1 cut(s) 1299
BseMI GCAATG 2 cut(s) 222, 1272
BseMII CTCAG 5 cut(s) 295, 483, 1221, 1437, 1505
BseNI ACTGG 2 cut(s) 600, 1528
BseRI GAGGAG 6 cut(s) 320, 374, 782, 1163, 1218, 1397
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 5 cut(s) 212, 646, 649, 793, 1022
Bsh1236I CGCG 1 cut(s) 1600
Bsh1285I CGRYCG 1 cut(s) 230
BshTI ACCGGT 1 cut(s) 229
BsiEI CGRYCG 1 cut(s) 230
BsiHKAI GWGCWC 2 cut(s) 282, 1210
BsiHKCI CYCGRG 1 cut(s) 92
BsiSI CCGG 3 cut(s) 230, 261, 419
BslFI GGGAC 1 cut(s) 1427
BslI CCNNNNNNNGG 1 cut(s) 1299
BsmAI GTCTC 2 cut(s) 463, 885
BsmFI GGGAC 1 cut(s) 1427
BsmI GAATGC 1 cut(s) 705
BsoBI CYCGRG 1 cut(s) 92
Bsp1286I GDGCHC 3 cut(s) 160, 282, 1210
Bsp1407I TGTACA 1 cut(s) 533
Bsp143I GATC 5 cut(s) 17, 250, 715, 1051, 1570
Bsp1720I GCTNAGC 2 cut(s) 281, 1446
BspACI CCGC 4 cut(s) 652, 679, 1411, 1598
BspCNI CTCAG 5 cut(s) 294, 484, 1222, 1438, 1504
BspFNI CGCG 1 cut(s) 1600
BspLI GGNNCC 2 cut(s) 1415, 1509
BspMI ACCTGC 1 cut(s) 803
BspPI GGATC 2 cut(s) 25, 1565
BspQI GCTCTTC 1 cut(s) 270
BspTI CTTAAG 2 cut(s) 509, 926
BsrDI GCAATG 2 cut(s) 222, 1272
BsrFI RCCGGY 2 cut(s) 229, 418
BsrGI TGTACA 1 cut(s) 533
BsrI ACTGG 2 cut(s) 600, 1528
BssAI RCCGGY 2 cut(s) 229, 418
BssMI GATC 5 cut(s) 17, 250, 715, 1051, 1570
BssNAI GTATAC 2 cut(s) 121, 1368
Bst1107I GTATAC 2 cut(s) 121, 1368
Bst4CI ACNGT 2 cut(s) 300, 407
Bst6I CTCTTC 7 cut(s) 270, 491, 885, 926, 1158, 1195, 1356
BstAFI CTTAAG 2 cut(s) 509, 926
BstAPI GCANNNNNTGC 2 cut(s) 197, 989
BstAUI TGTACA 1 cut(s) 533
BstBAI YACGTR 2 cut(s) 1003, 1241
BstC8I GCNNGC 5 cut(s) 171, 1157, 1227, 1534, 1557
BstDEI CTNAG 5 cut(s) 281, 492, 1230, 1446, 1491
BstF5I GGATG 4 cut(s) 433, 595, 1183, 1660
BstFNI CGCG 1 cut(s) 1600
BstKTI GATC 5 cut(s) 20, 253, 718, 1054, 1573
BstMAI GTCTC 2 cut(s) 463, 885
BstMBI GATC 5 cut(s) 17, 250, 715, 1051, 1570
BstMCI CGRYCG 1 cut(s) 230
BstMWI GCNNNNNNNGC 3 cut(s) 197, 989, 1235
BstNSI RCATGY 1 cut(s) 15
BstSFI CTRYAG 2 cut(s) 955, 1014
BstSLI GKGCMC 1 cut(s) 160
BstSNI TACGTA 1 cut(s) 1003
BstUI CGCG 1 cut(s) 1600
BstV1I GCAGC 5 cut(s) 212, 646, 649, 793, 1022
BstV2I GAAGAC 3 cut(s) 1337, 1411, 1549
BstX2I RGATCY 1 cut(s) 715
BstYI RGATCY 1 cut(s) 715
BstZ17I GTATAC 2 cut(s) 121, 1368
BsuI GTATCC 1 cut(s) 748
BtsCI GGATG 4 cut(s) 433, 595, 1183, 1660
BveI ACCTGC 1 cut(s) 803
Cac8I GCNNGC 5 cut(s) 171, 1157, 1227, 1534, 1557
Cfr10I RCCGGY 2 cut(s) 229, 418
Cfr13I GGNCC 4 cut(s) 523, 973, 1033, 1414
Csp6I GTAC 4 cut(s) 233, 534, 1457, 1593
CspAI ACCGGT 1 cut(s) 229
CviAII CATG 7 cut(s) 12, 479, 730, 818, 1037, 1299, 1354
CviQI GTAC 4 cut(s) 233, 534, 1457, 1593
DdeI CTNAG 5 cut(s) 281, 492, 1230, 1446, 1491
DpnI GATC 5 cut(s) 19, 252, 717, 1053, 1572
DpnII GATC 5 cut(s) 17, 250, 715, 1051, 1570
Eam1104I CTCTTC 7 cut(s) 270, 491, 885, 926, 1158, 1195, 1356
EarI CTCTTC 7 cut(s) 270, 491, 885, 926, 1158, 1195, 1356
Ecl136II GAGCTC 2 cut(s) 280, 1208
Eco105I TACGTA 1 cut(s) 1003
Eco24I GRGCYC 2 cut(s) 282, 1210
Eco47I GGWCC 4 cut(s) 523, 973, 1033, 1414
Eco53kI GAGCTC 2 cut(s) 280, 1208
Eco57I CTGAAG 3 cut(s) 20, 795, 1049
Eco72I CACGTG 1 cut(s) 1241
Eco88I CYCGRG 1 cut(s) 92
EcoICRI GAGCTC 2 cut(s) 280, 1208
EcoT38I GRGCYC 2 cut(s) 282, 1210
FaeI CATG 7 cut(s) 15, 482, 733, 821, 1040, 1302, 1357
FalI AAGNNNNNCTT 6 cut(s) 180, 212, 1095, 1127, 1443, 1475
FaqI GGGAC 1 cut(s) 1427
FatI CATG 7 cut(s) 11, 478, 729, 817, 1036, 1298, 1353
FauI CCCGC 2 cut(s) 672, 1404
FauNDI CATATG 1 cut(s) 969
FbaI TGATCA 1 cut(s) 250
FblI GTMKAC 2 cut(s) 120, 1367
Fnu4HI GCNGC 5 cut(s) 201, 660, 663, 807, 1011
FokI GGATG 4 cut(s) 440, 582, 1190, 1667
FriOI GRGCYC 2 cut(s) 282, 1210
Fsp4HI GCNGC 5 cut(s) 201, 660, 663, 807, 1011
FspBI CTAG 3 cut(s) 113, 356, 944
GluI GCNGC 5 cut(s) 201, 660, 663, 807, 1011
GsuI CTGGAG 1 cut(s) 1545
HapII CCGG 3 cut(s) 230, 261, 419
Hin1II CATG 7 cut(s) 15, 482, 733, 821, 1040, 1302, 1357
HincII GTYRAC 2 cut(s) 136, 1521
HindII GTYRAC 2 cut(s) 136, 1521
HindIII AAGCTT 1 cut(s) 1089
HinfI GANTC 7 cut(s) 62, 182, 483, 611, 1019, 1426, 1624
HpaII CCGG 3 cut(s) 230, 261, 419
Hpy166II GTNNAC 9 cut(s) 121, 136, 534, 850, 1033, 1326, 1368, 1521, 1677
Hpy188III TCNNGA 7 cut(s) 113, 347, 356, 713, 1023, 1605, 1652
Hpy8I GTNNAC 9 cut(s) 121, 136, 534, 850, 1033, 1326, 1368, 1521, 1677
Hpy99I CGWCG 1 cut(s) 1404
HpyAV CCTTC 6 cut(s) 444, 611, 1300, 1381, 1491, 1498
HpyCH4III ACNGT 2 cut(s) 300, 407
HpyCH4IV ACGT 3 cut(s) 1002, 1240, 1399
HpyF10VI GCNNNNNNNGC 3 cut(s) 197, 989, 1235
HpyF3I CTNAG 5 cut(s) 281, 492, 1230, 1446, 1491
HpySE526I ACGT 3 cut(s) 1002, 1240, 1399
Hsp92II CATG 7 cut(s) 15, 482, 733, 821, 1040, 1302, 1357
Ksp22I TGATCA 1 cut(s) 250
Kzo9I GATC 5 cut(s) 17, 250, 715, 1051, 1570
LguI GCTCTTC 1 cut(s) 270
LmnI GCTCC 6 cut(s) 223, 769, 1205, 1390, 1513, 1564
Lsp1109I GCAGC 5 cut(s) 212, 646, 649, 793, 1022
MaeI CTAG 3 cut(s) 113, 356, 944
MaeII ACGT 3 cut(s) 1002, 1240, 1399
MaeIII GTNAC 1 cut(s) 1613
MalI GATC 5 cut(s) 19, 252, 717, 1053, 1572
MboI GATC 5 cut(s) 17, 250, 715, 1051, 1570
MfeI CAATTG 3 cut(s) 174, 762, 993
MflI RGATCY 1 cut(s) 715
MhlI GDGCHC 3 cut(s) 160, 282, 1210
MlyI GAGTC 3 cut(s) 71, 477, 1028
MmeI TCCRAC 3 cut(s) 37, 282, 867
MroXI GAANNNNTTC 1 cut(s) 1546
MseI TTAA 8 cut(s) 387, 510, 687, 927, 1080, 1251, 1640, 1684
MslI CAYNNNNRTG 3 cut(s) 477, 1041, 1653
MspA1I CMGCKG 2 cut(s) 652, 1411
MspCI CTTAAG 2 cut(s) 509, 926
MspI CCGG 3 cut(s) 230, 261, 419
MunI CAATTG 3 cut(s) 174, 762, 993
Mva1269I GAATGC 1 cut(s) 705
MvnI CGCG 1 cut(s) 1600
MwoI GCNNNNNNNGC 3 cut(s) 197, 989, 1235
NdeI CATATG 1 cut(s) 969
NdeII GATC 5 cut(s) 17, 250, 715, 1051, 1570
NlaIII CATG 7 cut(s) 15, 482, 733, 821, 1040, 1302, 1357
NlaIV GGNNCC 2 cut(s) 1415, 1509
NmuCI GTSAC 1 cut(s) 1613
NspI RCATGY 1 cut(s) 15
PaeR7I CTCGAG 1 cut(s) 92
PciI ACATGT 1 cut(s) 11
PciSI GCTCTTC 1 cut(s) 270
PctI GAATGC 1 cut(s) 705
PdmI GAANNNNTTC 1 cut(s) 1546
PfeI GAWTC 4 cut(s) 182, 611, 1426, 1624
PflMI CCANNNNNTGG 1 cut(s) 1299
PinAI ACCGGT 1 cut(s) 229
PkrI GCNGC 5 cut(s) 202, 661, 664, 808, 1012
PleI GAGTC 3 cut(s) 70, 477, 1027
PmaCI CACGTG 1 cut(s) 1241
PmlI CACGTG 1 cut(s) 1241
PpsI GAGTC 3 cut(s) 70, 477, 1027
Ppu21I YACGTR 2 cut(s) 1003, 1241
PscI ACATGT 1 cut(s) 11
PshBI ATTAAT 1 cut(s) 387
Psp124BI GAGCTC 2 cut(s) 282, 1210
PspCI CACGTG 1 cut(s) 1241
PspN4I GGNNCC 2 cut(s) 1415, 1509
PspPI GGNCC 4 cut(s) 523, 973, 1033, 1414
PspXI VCTCGAGB 1 cut(s) 92
PsrI GAACNNNNNNTAC 2 cut(s) 1585, 1617
PsuI RGATCY 1 cut(s) 715
RsaI GTAC 4 cut(s) 234, 535, 1458, 1594
RsaNI GTAC 4 cut(s) 233, 534, 1457, 1593
RseI CAYNNNNRTG 3 cut(s) 477, 1041, 1653
SacI GAGCTC 2 cut(s) 282, 1210
SapI GCTCTTC 1 cut(s) 270
SaqAI TTAA 8 cut(s) 387, 510, 687, 927, 1080, 1251, 1640, 1684
SatI GCNGC 5 cut(s) 201, 660, 663, 807, 1011
Sau3AI GATC 5 cut(s) 17, 250, 715, 1051, 1570
Sau96I GGNCC 4 cut(s) 523, 973, 1033, 1414
SchI GAGTC 3 cut(s) 71, 477, 1028
SduI GDGCHC 3 cut(s) 160, 282, 1210
SfcI CTRYAG 2 cut(s) 955, 1014
Sfr274I CTCGAG 1 cut(s) 92
SinI GGWCC 4 cut(s) 523, 973, 1033, 1414
SlaI CTCGAG 1 cut(s) 92
SmiMI CAYNNNNRTG 3 cut(s) 477, 1041, 1653
SmlI CTYRAG 5 cut(s) 92, 98, 509, 926, 1220
SmoI CTYRAG 5 cut(s) 92, 98, 509, 926, 1220
SnaBI TACGTA 1 cut(s) 1003
SsiI CCGC 4 cut(s) 652, 679, 1411, 1598
SspI AATATT 1 cut(s) 802
SspMI CTAG 3 cut(s) 113, 356, 944
SstI GAGCTC 2 cut(s) 282, 1210
TaaI ACNGT 2 cut(s) 300, 407
TaiI ACGT 3 cut(s) 1005, 1243, 1402
TaqI TCGA 4 cut(s) 93, 1050, 1161, 1402
TaqII GACCGA 1 cut(s) 1632
TatI WGTACW 1 cut(s) 533
TfiI GAWTC 4 cut(s) 182, 611, 1426, 1624
Tru1I TTAA 8 cut(s) 387, 510, 687, 927, 1080, 1251, 1640, 1684
Tru9I TTAA 8 cut(s) 387, 510, 687, 927, 1080, 1251, 1640, 1684
TseFI GTSAC 1 cut(s) 1613
TseI GCWGC 5 cut(s) 200, 659, 662, 806, 1010
Tsp45I GTSAC 1 cut(s) 1613
Van91I CCANNNNNTGG 1 cut(s) 1299
Vha464I CTTAAG 2 cut(s) 509, 926
VpaK11BI GGWCC 4 cut(s) 523, 973, 1033, 1414
VspI ATTAAT 1 cut(s) 387
XapI RAATTY 1 cut(s) 372
XbaI TCTAGA 2 cut(s) 112, 355
XceI RCATGY 1 cut(s) 15
XhoI CTCGAG 1 cut(s) 92
XmiI GTMKAC 2 cut(s) 120, 1367
XmnI GAANNNNTTC 1 cut(s) 1546
XspI CTAG 3 cut(s) 113, 356, 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.