Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0009500

Physical Location & Seq

Genomic Coordinates Forward (+)

64704401 .. 64707971

Gene Structure 3571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG378100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGTCTAATCTCCAAAGCGACCAGCTTCTGCAAATGGAAACAACATGCGGGTCTCTTCTATATGAGCTCCAGATAATTTGGAATGAAGTTGGAGAGACGGACACTGATAGGGACAAGATGTTGCTTGAGCTTGAGCAGGAGTGCCTTGAAGTATACAGAAGAAAGGTTGATCAGGCTAATCGGAGTAGGGCACAGCTACGTCAGGCAATTGCTGACTCTGAAGCAGAACTTGCAGCAATCTGTTCTGCAATGGGGGAGCGACCAGTTCATATTAGGCAGTCGGATCAAAATGCTGGAAGCTTGAAGGAAGAACTCAGTAAAATAATTCCACAGCTGGAGGAAATGCAGAAGAGAAAAATTGAAAGAAAAAATCAATTTCTAGAAGTTGTGGAGGAGATACAAATTATTTCAAGTGAAATTAATGGAAGCACAAGTTGCATTTCTTCTAATATAGTTGTGGATGAAACTGATTTGTCTTTGAGAAGGCTTGAAGAATTGCACAGACAGCTCCATGCACTCCAAACAGAGAAGAGTGATAGGCTGAAGCAGATACAGGCCCATCTGGGTACATTGAACTCGCTTTGCTTAGTTCTTGGTATGGATTTCAAACAGACAATCAGTGAGGTTCATCCCAGTCTAGATAATTCTGAAGGATGTAAAGATATAAGTTTGGACTTAATTGAGCGATTGGCCACTGCAATAAAGAAATTGCGTGATGTTAAATTACAGAGAATGCAGAGGCTTCAAGATCTTGCAACCACCATGTTGGAGCTGTGGAACTTGATGGATACGCCAATAGAGGAGCAACAGATGTTTCAGAATATAACATGTAACATAGCTGCTTCAGAACATGAGATAACTGAGCCGGATGCGCTCTCCGTGGACTTCATCAATTATAAAACATCTAAGAATGTGTTTCTGAATGTCTGCACCATTTTTGCTTGTGCAGGAGTTGTAGACCCTTCTTGCGTATTGGACCAAATTGAGGTTCAGGTTGCAAAGGTTAAAGAGGAAGCTTTTAGCAGGAAAGACATACTTGAAAGAGTTGACAAATGGTTGTTTGCTTGTGATGAGGAGTGCTGGCTTGAGGAATATAACAGGGATGAAAACCGATATAATGCCGGTAGAGGAGCTCATCTTACTCTCAAGCGCGCTGAGAAAGCACGTGCTTTGGTTAACAAACTTCCAGCAATGGTGGATGCATTGGCTTCAAAAACCATCGCATGGGAGAAGGAGAGAGGAATTGAATTTACTTATGATGGTGTTCGTCTTCTTTCCATGCTGGAGGAGTATACTATATTACGGGATGAAAAGGAACAAGAACGCCGAAGGCAGCGGGACCAGAAAAAGATTCAGGGTCAGCTGATAGCTGAACAAGAAGCACTTTATGGGTCAAAACCTAGTCCTTCAAAGCCGAGTGTAAAAAAGGGTCCCAGAATGTCAACAGGAGGTGCAAGCAATAGAAGACTTTCAATCCAAGCTCCCAAAGCTGATCCAATTCACTCCGCTAGAGTGCCTGCTACTCCTCTTTCACGTCCTAGTTCAAGGAAGAGTGATCGAGGCCACCAAAATGATCATCACGATGATGGCCTTACAGCTTTGGCCACTGGAAGGAGAACCTTAAGTCGGAATAGCTCTTTTGGTTCCAACTATGAACCAGAGTCACCCATGATGCGGAAACCCTTTGCGCCAATTTCTCTTCCTACTGATAACGGCACATTTGCTACTCCTATGAAGTCCACAAATGTTCCAGAGGAAGACAACACAAAAACACCCAAGGTGATGACTTTTGTGCCCACCACACCACAAACAGTGTCGGTACCAATGCAGACAGCCGTGACCCCAGCTCCTCCACCACCTCAGCCGATTCCTTATGCCACCAAAGTAGTCGAGGAGGTTACTCCTGAAGAGATTGAATACTCTTTTGAGGAAATCAGAGCGGGTTTCGTGCTCCCTGAAGCACATACCAAGTCGATACATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009524 GO:0009574 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022607 GO:0030863 GO:0030981 GO:0031109 GO:0032502 GO:0032506 GO:0034622 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044002 GO:0044085 GO:0044111 GO:0044115 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0046785 GO:0048285 GO:0048646 GO:0048856 GO:0050896 GO:0051258 GO:0051301 GO:0051701 GO:0051704 GO:0051707 GO:0051816 GO:0052093 GO:0052095 GO:0052096 GO:0055028 GO:0061640 GO:0065003 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MAP65_ASE1

Protein Analysis

661

Amino Acids

74.71

Weight (kDa)

5.46

Isoelectric Point (pI)

57.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAP65_ASE1	PF03999	18 - 298	3.8e-52	Microtubule associated protein (MAP65/ASE1 family)
MAP65_ASE1	PF03999	324 - 472	3.5e-42	Microtubule associated protein (MAP65/ASE1 family)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51600
fragaria_vesca	FvH4_7g28190 FvH4_7g28190 FvH4_7g28190 FvH4_7g28190
malus_domestica	MD01G1185800.v1.1 MD07G1257900.v1.1
prunus_persica	Prupe.2G282400_v2.0.a1 Prupe.2G282400_v2.0.a1 Prupe.2G282400_v2.0.a1
pyrus_communis	pycom01g19750 pycom07g23100
rosa_chinensis	RchiOBHm_Chr1g0375141
rosa_laevigata	RLG00000026683
rosa_multiflora	Rmu_sc0000554.1_g000022
rosa_roxburghii	Rroxscaffold_4G00282980
rosa_rugosa	Rorug01G0388800
rosa_samantha	Rh1AG399300 Rh1BG365200 Rh1CG378100 Rh1DG395900
rosa_wichuraiana	Rw1G035450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	897
Acc65I	GGTACC	1 cut(s)	1819
AccB1I	GGYRCC	1 cut(s)	1819
AccB7I	CCANNNNNTGG	1 cut(s)	1224
AccBSI	CCGCTC	1 cut(s)	1940
AccI	GTMKAC	3 cut(s)	153, 957, 1292
AccII	CGCG	1 cut(s)	1152
AciI	CCGC	5 cut(s)	48, 1336, 1506, 1675, 1940
AclWI	GGATC	2 cut(s)	291, 1487
AcoI	YGGCCR	2 cut(s)	690, 1602
AcsI	RAATTY	1 cut(s)	1247
AcuI	CTGAAG	6 cut(s)	240, 563, 669, 828, 1926, 1977
AcvI	CACGTG	1 cut(s)	1166
AfaI	GTAC	2 cut(s)	568, 1821
AfiI	CCNNNNNNNGG	5 cut(s)	985, 1224, 1611, 1626, 1674
AflII	CTTAAG	1 cut(s)	1621
AflIII	ACRYGT	2 cut(s)	827, 1978
AjiI	CACGTC	1 cut(s)	1535
AjuI	GAANNNNNNNTTGG	2 cut(s)	972, 1004
Alw21I	GWGCWC	3 cut(s)	69, 1135, 1953
Alw26I	GTCTC	2 cut(s)	57, 89
AlwI	GGATC	2 cut(s)	291, 1487
AlwNI	CAGNNNCTG	1 cut(s)	28
AoxI	GGCC	5 cut(s)	555, 690, 1561, 1588, 1602
ApeKI	GCWGC	3 cut(s)	233, 839, 1333
ApoI	RAATTY	1 cut(s)	1247
AseI	ATTAAT	1 cut(s)	420
Asp700I	GAANNNNTTC	1 cut(s)	1468
Asp718I	GGTACC	1 cut(s)	1819
AspLEI	GCGC	4 cut(s)	874, 1152, 1154, 1690
AspS9I	GGNCC	4 cut(s)	556, 976, 1339, 1430
AsuHPI	GGTGA	2 cut(s)	1656, 1792
AvaII	GGWCC	3 cut(s)	976, 1339, 1430
BaeGI	GKGCMC	2 cut(s)	193, 1797
BalI	TGGCCA	2 cut(s)	692, 1604
BanI	GGYRCC	1 cut(s)	1819
BanII	GRGCYC	2 cut(s)	69, 1135
BbrPI	CACGTG	1 cut(s)	1166
BbsI	GAAGAC	3 cut(s)	1262, 1471, 1764
Bbv12I	GWGCWC	3 cut(s)	69, 1135, 1953
BbvCI	CCTCAGC	1 cut(s)	1860
BbvI	GCAGC	3 cut(s)	245, 826, 1345
BccI	CCATC	5 cut(s)	567, 778, 1226, 1253, 1580
BceAI	ACGGC	2 cut(s)	1729, 1820
BciVI	GTATCC	1 cut(s)	781
BclI	TGATCA	2 cut(s)	169, 1573
BcoDI	GTCTC	2 cut(s)	57, 89
BfaI	CTAG	5 cut(s)	380, 638, 1401, 1509, 1539
BfrI	CTTAAG	1 cut(s)	1621
BfuI	GTATCC	1 cut(s)	781
BglII	AGATCT	1 cut(s)	748
BisI	GCNGC	3 cut(s)	234, 840, 1334
BlsI	GCNGC	3 cut(s)	235, 841, 1335
Bme18I	GGWCC	3 cut(s)	976, 1339, 1430
BmgBI	CACGTC	1 cut(s)	1535
BmgT120I	GGNCC	4 cut(s)	556, 976, 1339, 1430
BmiI	GGNNCC	5 cut(s)	1340, 1431, 1432, 1645, 1821
BmrI	ACTGGG	1 cut(s)	627
BmsI	GCATC	3 cut(s)	859, 1189, 1662
BmuI	ACTGGG	1 cut(s)	627
BpiI	GAAGAC	3 cut(s)	1262, 1471, 1764
BpmI	CTGGAG	3 cut(s)	53, 356, 1304
Bpu10I	CCTNAGC	1 cut(s)	1860
BpuEI	CTTGAG	4 cut(s)	146, 152, 1106, 1130
BsaAI	YACGTR	1 cut(s)	1166
BsaI	GGTCTC	1 cut(s)	57
BsaJI	CCNNGG	2 cut(s)	879, 1776
BsaXI	ACNNNNNCTCC	2 cut(s)	1831, 1861
Bsc4I	CCNNNNNNNGG	5 cut(s)	985, 1224, 1611, 1626, 1674
Bse118I	RCCGGY	1 cut(s)	1121
Bse1I	ACTGG	3 cut(s)	263, 633, 1612
Bse3DI	GCAATG	2 cut(s)	255, 1197
BseDI	CCNNGG	2 cut(s)	879, 1776
BseGI	GGATG	7 cut(s)	466, 628, 659, 874, 1108, 1204, 1312
BseLI	CCNNNNNNNGG	5 cut(s)	985, 1224, 1611, 1626, 1674
BseMI	GCAATG	2 cut(s)	255, 1197
BseMII	CTCAG	4 cut(s)	328, 852, 1146, 1874
BseNI	ACTGG	3 cut(s)	263, 633, 1612
BsePI	GCGCGC	1 cut(s)	1150
BseRI	GAGGAG	8 cut(s)	407, 815, 1088, 1143, 1301, 1515, 1839, 1907
BseSI	GKGCMC	2 cut(s)	193, 1797
BseXI	GCAGC	3 cut(s)	245, 826, 1345
BseYI	CCCAGC	1 cut(s)	1843
BsgI	GTGCAG	2 cut(s)	913, 966
Bsh1236I	CGCG	1 cut(s)	1152
BshFI	GGCC	5 cut(s)	557, 692, 1563, 1590, 1604
BshNI	GGYRCC	1 cut(s)	1819
BsiHKAI	GWGCWC	3 cut(s)	69, 1135, 1953
BsiSI	CCGG	2 cut(s)	866, 1122
BslFI	GGGAC	3 cut(s)	125, 1352, 1416
BslI	CCNNNNNNNGG	5 cut(s)	985, 1224, 1611, 1626, 1674
BsmAI	GTCTC	2 cut(s)	57, 89
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	3 cut(s)	125, 1352, 1416
BsmI	GAATGC	1 cut(s)	738
BsnI	GGCC	5 cut(s)	557, 692, 1563, 1590, 1604
Bso31I	GGTCTC	1 cut(s)	57
Bsp1286I	GDGCHC	5 cut(s)	69, 193, 1135, 1797, 1953
Bsp143I	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
BspACI	CCGC	5 cut(s)	48, 1336, 1506, 1675, 1940
BspANI	GGCC	5 cut(s)	557, 692, 1563, 1590, 1604
BspCNI	CTCAG	4 cut(s)	327, 853, 1147, 1873
BspFNI	CGCG	1 cut(s)	1152
BspLI	GGNNCC	5 cut(s)	1340, 1431, 1432, 1645, 1821
BspPI	GGATC	2 cut(s)	291, 1487
BspT107I	GGYRCC	1 cut(s)	1819
BspTI	CTTAAG	1 cut(s)	1621
BspTNI	GGTCTC	1 cut(s)	57
BsrBI	CCGCTC	1 cut(s)	1940
BsrDI	GCAATG	2 cut(s)	255, 1197
BsrFI	RCCGGY	1 cut(s)	1121
BsrI	ACTGG	3 cut(s)	263, 633, 1612
BssAI	RCCGGY	1 cut(s)	1121
BssECI	CCNNGG	2 cut(s)	879, 1776
BssHII	GCGCGC	1 cut(s)	1150
BssMI	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
BssNAI	GTATAC	2 cut(s)	154, 1293
BssT1I	CCWWGG	1 cut(s)	1776
Bst1107I	GTATAC	2 cut(s)	154, 1293
Bst4CI	ACNGT	1 cut(s)	1813
Bst6I	CTCTTC	6 cut(s)	60, 344, 524, 1544, 1704, 1902
BstAFI	CTTAAG	1 cut(s)	1621
BstAPI	GCANNNNNTGC	2 cut(s)	230, 435
BstBAI	YACGTR	1 cut(s)	1166
BstC8I	GCNNGC	4 cut(s)	1082, 1152, 1456, 1518
BstDEI	CTNAG	6 cut(s)	314, 586, 861, 906, 1155, 1860
BstDSI	CCRYGG	1 cut(s)	879
BstF5I	GGATG	7 cut(s)	466, 628, 659, 874, 1108, 1204, 1312
BstFNI	CGCG	1 cut(s)	1152
BstHHI	GCGC	4 cut(s)	874, 1152, 1154, 1690
BstKTI	GATC	6 cut(s)	172, 286, 751, 1495, 1558, 1576
BstMAI	GTCTC	2 cut(s)	57, 89
BstMBI	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 435, 505, 871, 1160, 1487
BstNSI	RCATGY	3 cut(s)	48, 831, 1982
BstSLI	GKGCMC	2 cut(s)	193, 1797
BstUI	CGCG	1 cut(s)	1152
BstV1I	GCAGC	3 cut(s)	245, 826, 1345
BstV2I	GAAGAC	3 cut(s)	1262, 1471, 1764
BstX2I	RGATCY	1 cut(s)	748
BstXI	CCANNNNNNTGG	1 cut(s)	766
BstYI	RGATCY	1 cut(s)	748
BstZ17I	GTATAC	2 cut(s)	154, 1293
BsuI	GTATCC	1 cut(s)	781
BsuRI	GGCC	5 cut(s)	557, 692, 1563, 1590, 1604
BtgI	CCRYGG	1 cut(s)	879
BtgZI	GCGATG	1 cut(s)	1204
BtrI	CACGTC	1 cut(s)	1535
BtsCI	GGATG	7 cut(s)	466, 628, 659, 874, 1108, 1204, 1312
BtsI	GCAGTG	1 cut(s)	693
BtsIMutI	CAGTG	5 cut(s)	102, 625, 693, 1605, 1818
Cac8I	GCNNGC	4 cut(s)	1082, 1152, 1456, 1518
CaiI	CAGNNNCTG	1 cut(s)	28
CfoI	GCGC	4 cut(s)	874, 1152, 1154, 1690
Cfr10I	RCCGGY	1 cut(s)	1121
Cfr13I	GGNCC	4 cut(s)	556, 976, 1339, 1430
Csp6I	GTAC	2 cut(s)	567, 1820
CviAII	CATG	9 cut(s)	45, 512, 763, 828, 851, 1224, 1279, 1669, 1979
CviQI	GTAC	2 cut(s)	567, 1820
DdeI	CTNAG	6 cut(s)	314, 586, 861, 906, 1155, 1860
DpnI	GATC	6 cut(s)	171, 285, 750, 1494, 1557, 1575
DpnII	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
EaeI	YGGCCR	2 cut(s)	690, 1602
Eam1104I	CTCTTC	6 cut(s)	60, 344, 524, 1544, 1704, 1902
EarI	CTCTTC	6 cut(s)	60, 344, 524, 1544, 1704, 1902
Ecl136II	GAGCTC	2 cut(s)	67, 1133
Eco130I	CCWWGG	1 cut(s)	1776
Eco24I	GRGCYC	2 cut(s)	69, 1135
Eco31I	GGTCTC	1 cut(s)	57
Eco47I	GGWCC	3 cut(s)	976, 1339, 1430
Eco53kI	GAGCTC	2 cut(s)	67, 1133
Eco57I	CTGAAG	6 cut(s)	240, 563, 669, 828, 1926, 1977
Eco72I	CACGTG	1 cut(s)	1166
EcoICRI	GAGCTC	2 cut(s)	67, 1133
EcoO109I	RGGNCCY	1 cut(s)	1430
EcoT14I	CCWWGG	1 cut(s)	1776
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	2 cut(s)	69, 1135
ErhI	CCWWGG	1 cut(s)	1776
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	9 cut(s)	48, 515, 766, 831, 854, 1227, 1282, 1672, 1982
FalI	AAGNNNNNCTT	6 cut(s)	213, 245, 1020, 1052, 1368, 1400
FaqI	GGGAC	3 cut(s)	125, 1352, 1416
FatI	CATG	9 cut(s)	44, 511, 762, 827, 850, 1223, 1278, 1668, 1978
FauI	CCCGC	3 cut(s)	41, 1329, 1933
FbaI	TGATCA	2 cut(s)	169, 1573
FblI	GTMKAC	3 cut(s)	153, 957, 1292
Fnu4HI	GCNGC	3 cut(s)	234, 840, 1334
FokI	GGATG	7 cut(s)	473, 615, 666, 881, 1115, 1211, 1319
FriOI	GRGCYC	2 cut(s)	69, 1135
Fsp4HI	GCNGC	3 cut(s)	234, 840, 1334
FspBI	CTAG	5 cut(s)	380, 638, 1401, 1509, 1539
GlaI	GCGC	4 cut(s)	873, 1151, 1153, 1689
GluI	GCNGC	3 cut(s)	234, 840, 1334
GsaI	CCCAGC	1 cut(s)	1847
GsuI	CTGGAG	3 cut(s)	53, 356, 1304
HaeIII	GGCC	5 cut(s)	557, 692, 1563, 1590, 1604
HapII	CCGG	2 cut(s)	866, 1122
HhaI	GCGC	4 cut(s)	874, 1152, 1154, 1690
Hin1II	CATG	9 cut(s)	48, 515, 766, 831, 854, 1227, 1282, 1672, 1982
Hin6I	GCGC	4 cut(s)	872, 1150, 1152, 1688
HinP1I	GCGC	4 cut(s)	872, 1150, 1152, 1688
HincII	GTYRAC	3 cut(s)	1048, 1177, 1443
HindII	GTYRAC	3 cut(s)	1048, 1177, 1443
HindIII	AAGCTT	2 cut(s)	298, 1014
HinfI	GANTC	4 cut(s)	215, 1351, 1661, 1867
HpaI	GTTAAC	1 cut(s)	1177
HpaII	CCGG	2 cut(s)	866, 1122
HphI	GGTGA	2 cut(s)	1656, 1792
Hpy166II	GTNNAC	8 cut(s)	154, 883, 958, 1048, 1177, 1293, 1443, 1740
Hpy188III	TCNNGA	7 cut(s)	70, 380, 638, 746, 1580, 1751, 1904
Hpy8I	GTNNAC	8 cut(s)	154, 883, 958, 1048, 1177, 1293, 1443, 1740
HpyAV	CCTTC	8 cut(s)	298, 477, 644, 972, 1225, 1323, 1416, 1605
HpyCH4III	ACNGT	1 cut(s)	1813
HpyCH4IV	ACGT	3 cut(s)	199, 1165, 1534
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 435, 505, 871, 1160, 1487
HpyF3I	CTNAG	6 cut(s)	314, 586, 861, 906, 1155, 1860
HpySE526I	ACGT	3 cut(s)	199, 1165, 1534
Hsp92II	CATG	9 cut(s)	48, 515, 766, 831, 854, 1227, 1282, 1672, 1982
HspAI	GCGC	4 cut(s)	872, 1150, 1152, 1688
KflI	GGGWCCC	1 cut(s)	1430
KpnI	GGTACC	1 cut(s)	1823
Ksp22I	TGATCA	2 cut(s)	169, 1573
KspAI	GTTAAC	1 cut(s)	1177
Kzo9I	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
LmnI	GCTCC	9 cut(s)	72, 256, 513, 769, 802, 1130, 1486, 1852, 1956
Lsp1109I	GCAGC	3 cut(s)	245, 826, 1345
LweI	GCATC	3 cut(s)	859, 1189, 1662
MaeI	CTAG	5 cut(s)	380, 638, 1401, 1509, 1539
MaeII	ACGT	3 cut(s)	199, 1165, 1534
MaeIII	GTNAC	4 cut(s)	830, 1662, 1837, 1897
MalI	GATC	6 cut(s)	171, 285, 750, 1494, 1557, 1575
MbiI	CCGCTC	1 cut(s)	1940
MboI	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
MfeI	CAATTG	1 cut(s)	207
MflI	RGATCY	1 cut(s)	748
MhlI	GDGCHC	5 cut(s)	69, 193, 1135, 1797, 1953
MlsI	TGGCCA	2 cut(s)	692, 1604
MluNI	TGGCCA	2 cut(s)	692, 1604
MlyI	GAGTC	2 cut(s)	209, 1670
MmeI	TCCRAC	5 cut(s)	70, 261, 747, 1607, 1671
Mox20I	TGGCCA	2 cut(s)	692, 1604
Mph1103I	ATGCAT	1 cut(s)	1204
MroXI	GAANNNNTTC	1 cut(s)	1468
MscI	TGGCCA	2 cut(s)	692, 1604
MseI	TTAA	6 cut(s)	420, 677, 720, 1005, 1176, 1622
MslI	CAYNNNNRTG	3 cut(s)	1569, 1581, 1584
Msp20I	TGGCCA	2 cut(s)	692, 1604
MspA1I	CMGCKG	3 cut(s)	334, 1336, 1363
MspCI	CTTAAG	1 cut(s)	1621
MspI	CCGG	2 cut(s)	866, 1122
MunI	CAATTG	1 cut(s)	207
Mva1269I	GAATGC	1 cut(s)	738
MvnI	CGCG	1 cut(s)	1152
MwoI	GCNNNNNNNGC	6 cut(s)	230, 435, 505, 871, 1160, 1487
NdeII	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
NlaIII	CATG	9 cut(s)	48, 515, 766, 831, 854, 1227, 1282, 1672, 1982
NlaIV	GGNNCC	5 cut(s)	1340, 1431, 1432, 1645, 1821
NmeAIII	GCCGAG	1 cut(s)	1440
NmuCI	GTSAC	2 cut(s)	1662, 1837
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	3 cut(s)	48, 831, 1982
PauI	GCGCGC	1 cut(s)	1150
PciI	ACATGT	2 cut(s)	827, 1978
PctI	GAATGC	1 cut(s)	738
PdmI	GAANNNNTTC	1 cut(s)	1468
PfeI	GAWTC	2 cut(s)	1351, 1867
PflMI	CCANNNNNTGG	1 cut(s)	1224
PkrI	GCNGC	3 cut(s)	235, 841, 1335
PleI	GAGTC	2 cut(s)	209, 1669
PmaCI	CACGTG	1 cut(s)	1166
PmlI	CACGTG	1 cut(s)	1166
PpsI	GAGTC	2 cut(s)	209, 1669
Ppu21I	YACGTR	1 cut(s)	1166
PpuMI	RGGWCCY	1 cut(s)	1430
PscI	ACATGT	2 cut(s)	827, 1978
PshBI	ATTAAT	1 cut(s)	420
PsiI	TTATAA	1 cut(s)	897
Psp124BI	GAGCTC	2 cut(s)	69, 1135
Psp5II	RGGWCCY	1 cut(s)	1430
PspCI	CACGTG	1 cut(s)	1166
PspFI	CCCAGC	1 cut(s)	1843
PspN4I	GGNNCC	5 cut(s)	1340, 1431, 1432, 1645, 1821
PspPI	GGNCC	4 cut(s)	556, 976, 1339, 1430
PspPPI	RGGWCCY	1 cut(s)	1430
PstNI	CAGNNNCTG	1 cut(s)	28
PsuI	RGATCY	1 cut(s)	748
PteI	GCGCGC	1 cut(s)	1150
PvuII	CAGCTG	2 cut(s)	334, 1363
RsaI	GTAC	2 cut(s)	568, 1821
RsaNI	GTAC	2 cut(s)	567, 1820
RseI	CAYNNNNRTG	3 cut(s)	1569, 1581, 1584
SacI	GAGCTC	2 cut(s)	69, 1135
SaqAI	TTAA	6 cut(s)	420, 677, 720, 1005, 1176, 1622
SatI	GCNGC	3 cut(s)	234, 840, 1334
Sau3AI	GATC	6 cut(s)	169, 283, 748, 1492, 1555, 1573
Sau96I	GGNCC	4 cut(s)	556, 976, 1339, 1430
SchI	GAGTC	2 cut(s)	209, 1670
SduI	GDGCHC	5 cut(s)	69, 193, 1135, 1797, 1953
SfaNI	GCATC	3 cut(s)	859, 1189, 1662
SinI	GGWCC	3 cut(s)	976, 1339, 1430
SmiMI	CAYNNNNRTG	3 cut(s)	1569, 1581, 1584
SmlI	CTYRAG	5 cut(s)	125, 131, 1085, 1145, 1621
SmoI	CTYRAG	5 cut(s)	125, 131, 1085, 1145, 1621
SsiI	CCGC	5 cut(s)	48, 1336, 1506, 1675, 1940
SspMI	CTAG	5 cut(s)	380, 638, 1401, 1509, 1539
SstI	GAGCTC	2 cut(s)	69, 1135
StyI	CCWWGG	1 cut(s)	1776
TaaI	ACNGT	1 cut(s)	1813
TaiI	ACGT	3 cut(s)	202, 1168, 1537
TaqI	TCGA	3 cut(s)	1558, 1890, 1973
TfiI	GAWTC	2 cut(s)	1351, 1867
Tru1I	TTAA	6 cut(s)	420, 677, 720, 1005, 1176, 1622
Tru9I	TTAA	6 cut(s)	420, 677, 720, 1005, 1176, 1622
TscAI	CASTG	5 cut(s)	109, 625, 700, 1612, 1818
TseFI	GTSAC	2 cut(s)	1662, 1837
TseI	GCWGC	3 cut(s)	233, 839, 1333
Tsp45I	GTSAC	2 cut(s)	1662, 1837
TspDTI	ATGAA	9 cut(s)	99, 257, 477, 617, 877, 1119, 1323, 1668, 1748
TspGWI	ACGGA	2 cut(s)	113, 868
TspRI	CASTG	5 cut(s)	109, 625, 700, 1612, 1818
Van91I	CCANNNNNTGG	1 cut(s)	1224
Vha464I	CTTAAG	1 cut(s)	1621
VpaK11BI	GGWCC	3 cut(s)	976, 1339, 1430
VspI	ATTAAT	1 cut(s)	420
XapI	RAATTY	1 cut(s)	1247
XbaI	TCTAGA	2 cut(s)	379, 637
XceI	RCATGY	3 cut(s)	48, 831, 1982
XmiI	GTMKAC	3 cut(s)	153, 957, 1292
XmnI	GAANNNNTTC	1 cut(s)	1468
XspI	CTAG	5 cut(s)	380, 638, 1401, 1509, 1539
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.