No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1185400.v1.1 MD09G1271900.v1.1 |
| pyrus_communis | pycom02g11260 pycom05g07370 |
| rosa_chinensis | RchiOBHm_Chr1g0344651 RchiOBHm_Chr5g0046261 RchiOBHm_Chr5g0046511 RchiOBHm_Chr5g0048851 |
| rosa_multiflora | Rmu_co8339355.1_g000001 |
| rosa_rugosa | Rorug01G0268500 |
| rosa_samantha | Rh3DG328200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 23 |
| AcoI | YGGCCR | 1 cut(s) | 149 |
| AcuI | CTGAAG | 1 cut(s) | 124 |
| AflII | CTTAAG | 1 cut(s) | 91 |
| AflIII | ACRYGT | 1 cut(s) | 104 |
| AgsI | TTSAA | 2 cut(s) | 53, 171 |
| AjnI | CCWGG | 1 cut(s) | 96 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 62, 94 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| AoxI | GGCC | 1 cut(s) | 149 |
| ApeKI | GCWGC | 2 cut(s) | 43, 135 |
| BalI | TGGCCA | 1 cut(s) | 151 |
| BbvI | GCAGC | 2 cut(s) | 55, 122 |
| BciT130I | CCWGG | 1 cut(s) | 98 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BfmI | CTRYAG | 1 cut(s) | 13 |
| BfrI | CTTAAG | 1 cut(s) | 91 |
| BisI | GCNGC | 3 cut(s) | 24, 44, 136 |
| BlsI | GCNGC | 3 cut(s) | 25, 45, 137 |
| Bme1390I | CCNGG | 1 cut(s) | 98 |
| BmrFI | CCNGG | 1 cut(s) | 98 |
| BpmI | CTGGAG | 1 cut(s) | 89 |
| BsaI | GGTCTC | 1 cut(s) | 26 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 62, 92 |
| Bse1I | ACTGG | 1 cut(s) | 72 |
| Bse3DI | GCAATG | 1 cut(s) | 33 |
| BseBI | CCWGG | 1 cut(s) | 98 |
| BseMI | GCAATG | 1 cut(s) | 33 |
| BseNI | ACTGG | 1 cut(s) | 72 |
| BseXI | GCAGC | 2 cut(s) | 55, 122 |
| BshFI | GGCC | 1 cut(s) | 151 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| BsnI | GGCC | 1 cut(s) | 151 |
| Bso31I | GGTCTC | 1 cut(s) | 26 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BspANI | GGCC | 1 cut(s) | 151 |
| BspMAI | CTGCAG | 1 cut(s) | 17 |
| BspTI | CTTAAG | 1 cut(s) | 91 |
| BspTNI | GGTCTC | 1 cut(s) | 26 |
| BsrDI | GCAATG | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 72 |
| BssMI | GATC | 1 cut(s) | 58 |
| Bst2UI | CCWGG | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 1 cut(s) | 147 |
| BstAFI | CTTAAG | 1 cut(s) | 91 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstNI | CCWGG | 1 cut(s) | 98 |
| BstNSI | RCATGY | 1 cut(s) | 108 |
| BstSCI | CCNGG | 1 cut(s) | 96 |
| BstSFI | CTRYAG | 1 cut(s) | 13 |
| BstV1I | GCAGC | 2 cut(s) | 55, 122 |
| BsuRI | GGCC | 1 cut(s) | 151 |
| BtsIMutI | CAGTG | 1 cut(s) | 152 |
| CviAII | CATG | 3 cut(s) | 105, 160, 190 |
| CviJI | RGCY | 2 cut(s) | 96, 151 |
| CviKI_1 | RGCY | 2 cut(s) | 96, 151 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| EaeI | YGGCCR | 1 cut(s) | 149 |
| Eco31I | GGTCTC | 1 cut(s) | 26 |
| Eco57I | CTGAAG | 1 cut(s) | 124 |
| EcoRII | CCWGG | 1 cut(s) | 96 |
| FaeI | CATG | 3 cut(s) | 108, 163, 193 |
| FaiI | YATR | 3 cut(s) | 106, 161, 191 |
| FatI | CATG | 3 cut(s) | 104, 159, 189 |
| Fnu4HI | GCNGC | 3 cut(s) | 24, 44, 136 |
| Fsp4HI | GCNGC | 3 cut(s) | 24, 44, 136 |
| GluI | GCNGC | 3 cut(s) | 24, 44, 136 |
| GsuI | CTGGAG | 1 cut(s) | 89 |
| HaeIII | GGCC | 1 cut(s) | 151 |
| Hin1II | CATG | 3 cut(s) | 108, 163, 193 |
| Hpy188I | TCNGA | 2 cut(s) | 123, 143 |
| Hpy188III | TCNNGA | 1 cut(s) | 62 |
| HpyCH4III | ACNGT | 1 cut(s) | 147 |
| HpyCH4V | TGCA | 1 cut(s) | 15 |
| Hsp92II | CATG | 3 cut(s) | 108, 163, 193 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LpnPI | CCDG | 4 cut(s) | 47, 53, 83, 110 |
| Lsp1109I | GCAGC | 2 cut(s) | 55, 122 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MlsI | TGGCCA | 1 cut(s) | 151 |
| MluNI | TGGCCA | 1 cut(s) | 151 |
| Mox20I | TGGCCA | 1 cut(s) | 151 |
| MscI | TGGCCA | 1 cut(s) | 151 |
| MseI | TTAA | 3 cut(s) | 92, 116, 196 |
| Msp20I | TGGCCA | 1 cut(s) | 151 |
| MspCI | CTTAAG | 1 cut(s) | 91 |
| MspR9I | CCNGG | 1 cut(s) | 98 |
| MvaI | CCWGG | 1 cut(s) | 98 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIII | CATG | 3 cut(s) | 108, 163, 193 |
| NspI | RCATGY | 1 cut(s) | 108 |
| PciI | ACATGT | 1 cut(s) | 104 |
| PkrI | GCNGC | 3 cut(s) | 25, 45, 137 |
| PscI | ACATGT | 1 cut(s) | 104 |
| Psp6I | CCWGG | 1 cut(s) | 96 |
| PspGI | CCWGG | 1 cut(s) | 96 |
| PstI | CTGCAG | 1 cut(s) | 17 |
| SaqAI | TTAA | 3 cut(s) | 92, 116, 196 |
| SatI | GCNGC | 3 cut(s) | 24, 44, 136 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| ScrFI | CCNGG | 1 cut(s) | 98 |
| SfcI | CTRYAG | 1 cut(s) | 13 |
| SmlI | CTYRAG | 1 cut(s) | 91 |
| SmoI | CTYRAG | 1 cut(s) | 91 |
| SsiI | CCGC | 1 cut(s) | 23 |
| StyD4I | CCNGG | 1 cut(s) | 96 |
| TaaI | ACNGT | 1 cut(s) | 147 |
| TaqI | TCGA | 1 cut(s) | 57 |
| TauI | GCSGC | 1 cut(s) | 26 |
| Tru1I | TTAA | 3 cut(s) | 92, 116, 196 |
| Tru9I | TTAA | 3 cut(s) | 92, 116, 196 |
| TscAI | CASTG | 1 cut(s) | 152 |
| TseI | GCWGC | 2 cut(s) | 43, 135 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 152 |
| Vha464I | CTTAAG | 1 cut(s) | 91 |
| XceI | RCATGY | 1 cut(s) | 108 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 104 |