pycom02g13560

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0014176
Physical Location & Seq
Reverse (-)
10057956 .. 10059217
1262 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g13560.2

Sequence Viewer

Length: 789 bp
ATGAAGAGCATGGCAAGCTCAGCTCCTCAGCGTATAGCCGCCATCGTAGGCGTCGGGCCGAAGCTGGGCCGCTCCATAGCCCGCAAGTTCGTCCACGAAGGCTATACCGTCGCTATTCTCGCCCGCGATCTCGGGAGGCTCTCGAAATTCGCAGACGAGATCGCGAGGGAAGAGAAGGCCCAGGTTTTTGCCATTAGGATAGACTGCTCCGAGTCTAGAAGCGTGAGGGAGGCATTTGAAGGGGTTTTGTCTTTGGGTTTTGTGGAGGTGCTGGTCTACAATGCGTACCAGCAGCCGCCCAATTGGCACCCCACCAACTTCACCGACATCCGCCTTGACTCGTTTGAGAAGTCCCTTACCGTTTCTTCCGTCGGAGCCTTTCACTGCGCTCAACAGGTGCTTCCGGGAATGGTGGAAAGAGGAAGGGGGACAATTTTGTTTACGGGGTGTTCAGGTTCACTCAAGGGCATTGCTGGCCGTTCTGAACTCTGTTGCGGAAAATTTGCATTGAGAGCTTTATCACAATGTTTGTCGATGGAGTTTCAACCGCATGGGATACACATAGCGCATGTAATCATTGACGGTGTGATTGGCCCACCTCGAGGGGGCCAATCATCATCGAGTGCTTCACAGAGGACGACGACGTTAGGTACAACGCCGATAGGGGTTGACGTGATAATGGATCCCGACGCGGTGGCTCAAACCTACTGGCAGTTGCACGTCCAAGACCGGAGTGCTTGGACCCAAGAAATCGACCTCCGTCCATCTAACCCCCCCAAATTCTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
adh_short

Protein Analysis

263

Amino Acids

28.46

Weight (kDa)

8.49

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014176)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50560
fragaria_vesca FvH4_1g15680
malus_domestica MD02G1168700.v1.1
prunus_persica Prupe.7G136500_v2.0.a1 Prupe.7G136500_v2.0.a1
pyrus_communis pycom02g13560 pycom15g24410
rosa_chinensis RchiOBHm_Chr2g0104991
rosa_laevigata RLG00000017387
rosa_multiflora Rmu_sc0000641.1_g000031
rosa_roxburghii Rroxscaffold_2G00138600
rosa_rugosa Rorug02G0124800
rosa_samantha Rh2AG175200 Rh2BG183100 Rh2CG179800 Rh2DG181600
rosa_wichuraiana Rw2G013770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 600
AccB1I GGYRCC 1 cut(s) 306
AccBSI CCGCTC 1 cut(s) 72
AccI GTMKAC 1 cut(s) 276
AccII CGCG 3 cut(s) 126, 164, 692
AciI CCGC 9 cut(s) 39, 70, 82, 124, 296, 331, 495, 548, 692
AclWI GGATC 2 cut(s) 677, 690
AcoI YGGCCR 1 cut(s) 475
AcsI RAATTY 3 cut(s) 146, 500, 779
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 2 cut(s) 287, 652
AfiI CCNNNNNNNGG 3 cut(s) 65, 602, 605
AgsI TTSAA 2 cut(s) 239, 545
AjiI CACGTC 2 cut(s) 673, 721
AjnI CCWGG 1 cut(s) 180
AluBI AGCT 4 cut(s) 18, 23, 64, 515
AluI AGCT 4 cut(s) 18, 23, 64, 515
AlwI GGATC 2 cut(s) 677, 690
Ama87I CYCGRG 2 cut(s) 131, 600
AoxI GGCC 6 cut(s) 56, 67, 177, 475, 592, 607
ApeKI GCWGC 1 cut(s) 292
ApoI RAATTY 3 cut(s) 146, 500, 779
AspLEI GCGC 2 cut(s) 389, 568
AspS9I GGNCC 6 cut(s) 56, 67, 178, 593, 607, 741
AsuC2I CCSGG 1 cut(s) 405
AsuHPI GGTGA 1 cut(s) 313
AvaI CYCGRG 2 cut(s) 131, 600
AvaII GGWCC 1 cut(s) 741
BamHI GGATCC 1 cut(s) 682
BanI GGYRCC 1 cut(s) 306
BbvCI CCTCAGC 1 cut(s) 27
BbvI GCAGC 1 cut(s) 304
BccI CCATC 3 cut(s) 50, 529, 772
BceAI ACGGC 1 cut(s) 462
BciT130I CCWGG 1 cut(s) 182
BciVI GTATCC 1 cut(s) 549
BcnI CCSGG 1 cut(s) 405
BfaI CTAG 1 cut(s) 216
BfuI GTATCC 1 cut(s) 549
BglI GCCNNNNNGGC 1 cut(s) 304
BisI GCNGC 4 cut(s) 39, 70, 293, 296
BlpI GCTNAGC 1 cut(s) 19
BlsI GCNGC 4 cut(s) 40, 71, 294, 297
Bme1390I CCNGG 2 cut(s) 182, 405
Bme18I GGWCC 1 cut(s) 741
BmeT110I CYCGRG 2 cut(s) 131, 600
BmgBI CACGTC 2 cut(s) 673, 721
BmgT120I GGNCC 6 cut(s) 56, 67, 178, 593, 607, 741
BmiI GGNNCC 5 cut(s) 308, 376, 608, 684, 743
BmrFI CCNGG 2 cut(s) 182, 405
BoxI GACNNNNGTC 1 cut(s) 759
Bpu10I CCTNAGC 1 cut(s) 27
Bpu1102I GCTNAGC 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 446
BpuMI CCSGG 1 cut(s) 405
BsaHI GRCGYC 1 cut(s) 51
BsaJI CCNNGG 1 cut(s) 180
BsaWI WCCGGW 1 cut(s) 729
Bsc4I CCNNNNNNNGG 3 cut(s) 65, 602, 605
Bse1I ACTGG 1 cut(s) 713
Bse3DI GCAATG 1 cut(s) 468
BseBI CCWGG 1 cut(s) 182
BseDI CCNNGG 1 cut(s) 180
BseGI GGATG 1 cut(s) 327
BseLI CCNNNNNNNGG 3 cut(s) 65, 602, 605
BseMI GCAATG 1 cut(s) 468
BseMII CTCAG 2 cut(s) 33, 41
BseNI ACTGG 1 cut(s) 713
BseRI GAGGAG 1 cut(s) 15
BseXI GCAGC 1 cut(s) 304
BseYI CCCAGC 1 cut(s) 64
Bsh1236I CGCG 3 cut(s) 126, 164, 692
BshFI GGCC 6 cut(s) 58, 69, 179, 477, 594, 609
BshNI GGYRCC 1 cut(s) 306
BsiHKCI CYCGRG 2 cut(s) 131, 600
BsiSI CCGG 2 cut(s) 404, 730
BslFI GGGAC 2 cut(s) 337, 442
BslI CCNNNNNNNGG 3 cut(s) 65, 602, 605
BsmFI GGGAC 2 cut(s) 337, 442
BsnI GGCC 6 cut(s) 58, 69, 179, 477, 594, 609
BsoBI CYCGRG 2 cut(s) 131, 600
Bsp143I GATC 3 cut(s) 127, 159, 682
Bsp1720I GCTNAGC 1 cut(s) 19
Bsp68I TCGCGA 1 cut(s) 164
BspACI CCGC 9 cut(s) 39, 70, 82, 124, 296, 331, 495, 548, 692
BspANI GGCC 6 cut(s) 58, 69, 179, 477, 594, 609
BspCNI CTCAG 2 cut(s) 32, 40
BspFNI CGCG 3 cut(s) 126, 164, 692
BspLI GGNNCC 5 cut(s) 308, 376, 608, 684, 743
BspPI GGATC 2 cut(s) 677, 690
BspT107I GGYRCC 1 cut(s) 306
BsrBI CCGCTC 1 cut(s) 72
BsrDI GCAATG 1 cut(s) 468
BsrI ACTGG 1 cut(s) 713
BssECI CCNNGG 1 cut(s) 180
BssMI GATC 3 cut(s) 127, 159, 682
BssNI GRCGYC 1 cut(s) 51
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 3 cut(s) 109, 361, 584
Bst6I CTCTTC 1 cut(s) 165
BstACI GRCGYC 1 cut(s) 51
BstC8I GCNNGC 4 cut(s) 16, 82, 124, 475
BstDEI CTNAG 2 cut(s) 19, 27
BstF5I GGATG 1 cut(s) 327
BstFNI CGCG 3 cut(s) 126, 164, 692
BstHHI GCGC 2 cut(s) 389, 568
BstKTI GATC 3 cut(s) 130, 162, 685
BstMBI GATC 3 cut(s) 127, 159, 682
BstMWI GCNNNNNNNGC 6 cut(s) 15, 20, 119, 304, 474, 512
BstNI CCWGG 1 cut(s) 182
BstNSI RCATGY 1 cut(s) 572
BstPAI GACNNNNGTC 1 cut(s) 759
BstSCI CCNGG 2 cut(s) 180, 403
BstUI CGCG 3 cut(s) 126, 164, 692
BstV1I GCAGC 1 cut(s) 304
BstX2I RGATCY 1 cut(s) 682
BstYI RGATCY 1 cut(s) 682
BsuI GTATCC 1 cut(s) 549
BsuRI GGCC 6 cut(s) 58, 69, 179, 477, 594, 609
BtrI CACGTC 2 cut(s) 673, 721
BtsCI GGATG 1 cut(s) 327
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 1 cut(s) 382
BtuMI TCGCGA 1 cut(s) 164
Cac8I GCNNGC 4 cut(s) 16, 82, 124, 475
CfoI GCGC 2 cut(s) 389, 568
Cfr13I GGNCC 6 cut(s) 56, 67, 178, 593, 607, 741
CseI GACGC 2 cut(s) 40, 698
Csp6I GTAC 2 cut(s) 286, 651
CviAII CATG 3 cut(s) 10, 551, 569
CviQI GTAC 2 cut(s) 286, 651
DdeI CTNAG 2 cut(s) 19, 27
DpnI GATC 3 cut(s) 129, 161, 684
DpnII GATC 3 cut(s) 127, 159, 682
EaeI YGGCCR 1 cut(s) 475
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
EciI GGCGGA 1 cut(s) 320
Eco47I GGWCC 1 cut(s) 741
Eco88I CYCGRG 2 cut(s) 131, 600
EcoRII CCWGG 1 cut(s) 180
FaeI CATG 3 cut(s) 13, 554, 572
FaiI YATR 7 cut(s) 11, 35, 77, 105, 552, 563, 570
FaqI GGGAC 2 cut(s) 337, 442
FatI CATG 3 cut(s) 9, 550, 568
FauI CCCGC 2 cut(s) 89, 131
FblI GTMKAC 1 cut(s) 276
Fnu4HI GCNGC 4 cut(s) 39, 70, 293, 296
FokI GGATG 1 cut(s) 314
Fsp4HI GCNGC 4 cut(s) 39, 70, 293, 296
FspBI CTAG 1 cut(s) 216
GlaI GCGC 2 cut(s) 388, 567
GluI GCNGC 4 cut(s) 39, 70, 293, 296
GsaI CCCAGC 1 cut(s) 68
HaeIII GGCC 6 cut(s) 58, 69, 179, 477, 594, 609
HapII CCGG 2 cut(s) 404, 730
HgaI GACGC 2 cut(s) 40, 698
HhaI GCGC 2 cut(s) 389, 568
Hin1I GRCGYC 1 cut(s) 51
Hin1II CATG 3 cut(s) 13, 554, 572
Hin6I GCGC 2 cut(s) 387, 566
HinP1I GCGC 2 cut(s) 387, 566
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HinfI GANTC 2 cut(s) 212, 338
HpaII CCGG 2 cut(s) 404, 730
HphI GGTGA 1 cut(s) 313
Hpy166II GTNNAC 5 cut(s) 94, 277, 441, 458, 670
Hpy188I TCNGA 3 cut(s) 211, 374, 484
Hpy188III TCNNGA 5 cut(s) 133, 142, 163, 216, 686
Hpy8I GTNNAC 5 cut(s) 94, 277, 441, 458, 670
Hpy99I CGWCG 6 cut(s) 56, 113, 374, 643, 646, 692
HpyAV CCTTC 4 cut(s) 92, 169, 233, 417
HpyCH4III ACNGT 3 cut(s) 109, 361, 584
HpyCH4IV ACGT 3 cut(s) 644, 672, 720
HpyCH4V TGCA 2 cut(s) 506, 718
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 20, 119, 304, 474, 512
HpyF3I CTNAG 2 cut(s) 19, 27
HpySE526I ACGT 3 cut(s) 644, 672, 720
Hsp92I GRCGYC 1 cut(s) 51
Hsp92II CATG 3 cut(s) 13, 554, 572
HspAI GCGC 2 cut(s) 387, 566
Kzo9I GATC 3 cut(s) 127, 159, 682
LmnI GCTCC 4 cut(s) 28, 77, 212, 374
Lsp1109I GCAGC 1 cut(s) 304
MaeI CTAG 1 cut(s) 216
MaeII ACGT 3 cut(s) 644, 672, 720
MalI GATC 3 cut(s) 129, 161, 684
MbiI CCGCTC 1 cut(s) 72
MboI GATC 3 cut(s) 127, 159, 682
MboII GAAGA 3 cut(s) 16, 182, 357
MfeI CAATTG 1 cut(s) 301
MflI RGATCY 1 cut(s) 682
MluCI AATT 5 cut(s) 146, 301, 432, 500, 779
MlyI GAGTC 2 cut(s) 221, 332
MmeI TCCRAC 1 cut(s) 352
MspI CCGG 2 cut(s) 404, 730
MspR9I CCNGG 2 cut(s) 182, 405
MunI CAATTG 1 cut(s) 301
MvaI CCWGG 1 cut(s) 182
MvnI CGCG 3 cut(s) 126, 164, 692
MwoI GCNNNNNNNGC 6 cut(s) 15, 20, 119, 304, 474, 512
NciI CCSGG 1 cut(s) 405
NdeII GATC 3 cut(s) 127, 159, 682
NlaIII CATG 3 cut(s) 13, 554, 572
NlaIV GGNNCC 5 cut(s) 308, 376, 608, 684, 743
NruI TCGCGA 1 cut(s) 164
NspI RCATGY 1 cut(s) 572
PaeR7I CTCGAG 1 cut(s) 600
PfoI TCCNGGA 1 cut(s) 403
PkrI GCNGC 4 cut(s) 40, 71, 294, 297
PleI GAGTC 2 cut(s) 220, 332
PpsI GAGTC 2 cut(s) 220, 332
PshAI GACNNNNGTC 1 cut(s) 759
Psp6I CCWGG 1 cut(s) 180
PspFI CCCAGC 1 cut(s) 64
PspGI CCWGG 1 cut(s) 180
PspN4I GGNNCC 5 cut(s) 308, 376, 608, 684, 743
PspPI GGNCC 6 cut(s) 56, 67, 178, 593, 607, 741
PspXI VCTCGAGB 1 cut(s) 600
PsuI RGATCY 1 cut(s) 682
RruI TCGCGA 1 cut(s) 164
RsaI GTAC 2 cut(s) 287, 652
RsaNI GTAC 2 cut(s) 286, 651
SatI GCNGC 4 cut(s) 39, 70, 293, 296
Sau3AI GATC 3 cut(s) 127, 159, 682
Sau96I GGNCC 6 cut(s) 56, 67, 178, 593, 607, 741
SchI GAGTC 2 cut(s) 221, 332
ScrFI CCNGG 2 cut(s) 182, 405
Sfr274I CTCGAG 1 cut(s) 600
SinI GGWCC 1 cut(s) 741
SlaI CTCGAG 1 cut(s) 600
SmlI CTYRAG 2 cut(s) 461, 600
SmoI CTYRAG 2 cut(s) 461, 600
Sse9I AATT 5 cut(s) 146, 301, 432, 500, 779
SsiI CCGC 9 cut(s) 39, 70, 82, 124, 296, 331, 495, 548, 692
SspMI CTAG 1 cut(s) 216
StyD4I CCNGG 2 cut(s) 180, 403
TaaI ACNGT 3 cut(s) 109, 361, 584
TaiI ACGT 3 cut(s) 647, 675, 723
TaqI TCGA 5 cut(s) 143, 533, 601, 620, 753
TasI AATT 5 cut(s) 146, 301, 432, 500, 779
TauI GCSGC 3 cut(s) 41, 72, 298
TscAI CASTG 1 cut(s) 389
TseI GCWGC 1 cut(s) 292
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 358, 749
TspRI CASTG 1 cut(s) 389
VpaK11BI GGWCC 1 cut(s) 741
XapI RAATTY 3 cut(s) 146, 500, 779
XbaI TCTAGA 1 cut(s) 215
XceI RCATGY 1 cut(s) 572
XhoI CTCGAG 1 cut(s) 600
XmiI GTMKAC 1 cut(s) 276
XspI CTAG 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.