Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004312

Physical Location & Seq

Genomic Coordinates Reverse (-)

10772558 .. 10776835

Gene Structure 4278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0124800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGAGGTGGCGTTGCCGGTGGCGGCGGAGGAAGGGTTCAGTGGTTTGCTCGGAGAATTGGATACGGTGGCAGAAGGGCTTGAGGAGTTTTCGAAAGAGGAGCTTCTTCAGGTTGATGGAGAGGGACGGTGTGTTGTTACTGATCATCATCATTTTGTTCTATTCAATTTGTATGGACCAAGAGCTGGAGGTGACGATACGGAAAGGATCAAGTTTAAGCTCAATTTTTATAAGATGTTACAGATGGGAGTCTCTCTTGCGTCAGGGGAGGAGGATAATTGTAGTTGGTGATCTGAACATTGCACCCACTTGCTTAGATCGTTGTGAAGCAGAACCAGAATTTGAGAACAATCAATTCAGAAGATGGTTTAGATCCATGTTAGTGGAAAATAGAGGATCTTTCTTTGATGTTTTCAGAGCAAAACATCCTGATAGAAGAGAAGCATACACATGCTGGTCACAAAGTAGTGGTGCTGAAGAATTTAATTATGGCTCCAGAATCGATCACATTCTTTGTGCTGGTTTATGTCTTCACCAAGAGCAGGACCTTGAAAACCATAACTTTGTAGCTTGCCATGTCAAGGAGTGTGACATATTGACACAATATAAACGGTGGAAACCAGGAAATTCACTGAGGTGGAAGGGAGGGCAGAGGAGTATCAAACTTGAAGGCTCCGATCATGCACCTGTTTACACAAGTTTACTGGAATTGCCTAATATCTGCCAGCATAGCACCCCACGTTTATCTGCTAGATATATTCCAATGGTTCGTGGTCTCCAGCAAACCCTTGTATCATTGTTAATGAAGAGAAAAGTTTCTGAAGTGGATGAAATTAACATTAAAGAGAGTTGTAGTGAGACAGAGACAAGCTTGCCTGACCAATGTGGCACACCCTGTTCTTCCTCGAGCCAAGACTTTGGATTTCGCAGTTCAAGAACAATTGAGTGTTCCCGCGGTTTTGCTAATGAGGCTGCTTGTGACACCTTGGTTACTTTAAGTAGTGAGCCTACCAAAACAAGGCCAGGGAATGAAACCAAGAAAAAAGCAAAAGGCAGTCAATTGTCCCAACTCTCATTGAGATCATTTTTCCAGAAAAGTTCAATCCCTAGCAAGAGCAACCGTGCAGACAGTGGGACTGAATCAACTCAGATAGATATTTCAGAATCTAATCATCTGCCAAATGAAACTCCCATGCCAACGAATCAAAGTGGCAGTGTAGAGCAGTGTGTATTGCACTCAAGCGCCTCAATTCGGGATGCGGATCAAGATGAACTCGCTGCTTGTTCTTTGAAGAAAGAGAAGAATAGTTTAGCTTTACTGGAGTGGCAAAGGTTACAGCAAGTCATGCAGAATAGCATACCACTTTGCAAGGGTCATCGAGAACCTTGTGTTCCTCGGGTTGTGAAGAAACAAGGTCCTAATTTTGGTCGCAGATTTTATGTTTGTGCACGTGCTGAGGGACCTGCATCAAATCCTGAAGCAAATTGTAATTATTTCAAATGGGCCGCTTCGAAACCTCGAAACAACAAAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SAP

Protein Analysis

511

Amino Acids

58.49

Weight (kDa)

9.23

Isoelectric Point (pI)

62.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	82 - 174	3.1e-07	Endonuclease/Exonuclease/phosphatase family
Zn_ribbon_GRF	PF06839	454 - 503	1.2e-12	GRF zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66840 AT5G66840
fragaria_vesca	FvH4_1g15670 FvH4_1g15670 FvH4_1g15670 FvH4_1g15670 FvH4_1g15670 FvH4_1g15670 FvH4_1g15670 FvH4_1g15670 FvH4_1g15670
malus_domestica	MD02G1168400.v1.1
prunus_persica	Prupe.7G136600_v2.0.a1 Prupe.7G136600_v2.0.a1 Prupe.7G136600_v2.0.a1
pyrus_communis	pycom02g13550 pycom15g24350 pycom15g24360
rosa_chinensis	RchiOBHm_Chr2g0104981
rosa_laevigata	RLG00000017385
rosa_multiflora	Rmu_sc0000641.1_g000032
rosa_roxburghii	Rroxscaffold_2G00138610
rosa_rugosa	Rorug02G0124300 Rorug02G0124400 Rorug02G0124500 Rorug02G0124600 Rorug02G0124700 Rorug02G0124800
rosa_samantha	Rh2AG175100 Rh2CG179700 Rh2DG181500
rosa_wichuraiana	Rw2G013760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	230
Acc36I	ACCTGC	1 cut(s)	1471
AccB7I	CCANNNNNTGG	1 cut(s)	184
AccII	CGCG	1 cut(s)	954
AciI	CCGC	6 cut(s)	22, 25, 952, 954, 1259, 1506
AclWI	GGATC	4 cut(s)	214, 366, 403, 1269
AcsI	RAATTY	3 cut(s)	338, 479, 625
AcuI	CTGAAG	4 cut(s)	91, 495, 840, 1497
AcvI	CACGTG	1 cut(s)	1451
AfiI	CCNNNNNNNGG	6 cut(s)	184, 541, 580, 1017, 1251, 1424
AgsI	TTSAA	7 cut(s)	165, 551, 668, 933, 1101, 1291, 1498
AjnI	CCWGG	2 cut(s)	619, 1021
AleI	CACNNNNGTG	1 cut(s)	634
AloI	GAACNNNNNNTCC	2 cut(s)	19, 51
AluBI	AGCT	6 cut(s)	102, 184, 219, 569, 870, 1313
AluI	AGCT	6 cut(s)	102, 184, 219, 569, 870, 1313
Alw21I	GWGCWC	1 cut(s)	1450
Alw26I	GTCTC	4 cut(s)	255, 779, 851, 857
Alw44I	GTGCAC	1 cut(s)	1446
AlwI	GGATC	4 cut(s)	214, 366, 403, 1269
Ama87I	CYCGRG	2 cut(s)	904, 1395
AoxI	GGCC	2 cut(s)	1019, 1503
ApaLI	GTGCAC	1 cut(s)	1446
ApeKI	GCWGC	2 cut(s)	971, 1277
ApoI	RAATTY	3 cut(s)	338, 479, 625
Asp700I	GAANNNNTTC	1 cut(s)	814
AspLEI	GCGC	1 cut(s)	1244
AspS9I	GGNCC	5 cut(s)	175, 544, 1415, 1460, 1503
AsuHPI	GGTGA	3 cut(s)	202, 299, 524
AsuII	TTCGAA	2 cut(s)	91, 1511
AvaI	CYCGRG	2 cut(s)	904, 1395
AvaII	GGWCC	4 cut(s)	175, 544, 1415, 1460
BaeGI	GKGCMC	1 cut(s)	1450
BaeI	ACNNNNGTAYC	2 cut(s)	774, 807
BbrPI	CACGTG	1 cut(s)	1451
BbsI	GAAGAC	1 cut(s)	521
Bbv12I	GWGCWC	1 cut(s)	1450
BbvCI	CCTCAGC	1 cut(s)	1455
BbvI	GCAGC	2 cut(s)	958, 1264
BccI	CCATC	3 cut(s)	109, 237, 357
BciT130I	CCWGG	2 cut(s)	621, 1023
BciVI	GTATCC	1 cut(s)	54
BclI	TGATCA	1 cut(s)	141
BcoDI	GTCTC	4 cut(s)	255, 779, 851, 857
BfaI	CTAG	2 cut(s)	750, 1107
BfoI	RGCGCY	1 cut(s)	1245
BfuAI	ACCTGC	1 cut(s)	1471
BfuI	GTATCC	1 cut(s)	54
BisI	GCNGC	4 cut(s)	23, 972, 1278, 1506
BlsI	GCNGC	4 cut(s)	24, 973, 1279, 1507
Bme1390I	CCNGG	2 cut(s)	621, 1023
Bme18I	GGWCC	4 cut(s)	175, 544, 1415, 1460
BmeT110I	CYCGRG	2 cut(s)	904, 1395
BmgT120I	GGNCC	5 cut(s)	175, 544, 1415, 1460, 1503
BmiI	GGNNCC	3 cut(s)	493, 673, 1461
BmrFI	CCNGG	2 cut(s)	621, 1023
BmsI	GCATC	2 cut(s)	1246, 1475
BpiI	GAAGAC	1 cut(s)	521
BpmI	CTGGAG	4 cut(s)	206, 478, 761, 1340
Bpu10I	CCTNAGC	1 cut(s)	1455
Bpu14I	TTCGAA	2 cut(s)	91, 1511
BpuEI	CTTGAG	2 cut(s)	100, 1222
Bsa29I	ATCGAT	1 cut(s)	501
BsaAI	YACGTR	1 cut(s)	1451
BsaBI	GATNNNNATC	2 cut(s)	146, 1260
BsaI	GGTCTC	1 cut(s)	779
BsaJI	CCNNGG	4 cut(s)	952, 984, 1022, 1394
BsaXI	ACNNNNNCTCC	2 cut(s)	19, 49
Bsc4I	CCNNNNNNNGG	6 cut(s)	184, 541, 580, 1017, 1251, 1424
Bse118I	RCCGGY	1 cut(s)	15
Bse1I	ACTGG	2 cut(s)	708, 1323
Bse3DI	GCAATG	1 cut(s)	297
Bse8I	GATNNNNATC	2 cut(s)	146, 1260
BseBI	CCWGG	2 cut(s)	621, 1023
BseCI	ATCGAT	1 cut(s)	501
BseDI	CCNNGG	4 cut(s)	952, 984, 1022, 1394
BseGI	GGATG	3 cut(s)	424, 832, 1261
BseJI	GATNNNNATC	2 cut(s)	146, 1260
BseLI	CCNNNNNNNGG	6 cut(s)	184, 541, 580, 1017, 1251, 1424
BseMI	GCAATG	1 cut(s)	297
BseMII	CTCAG	3 cut(s)	623, 1160, 1446
BseNI	ACTGG	2 cut(s)	708, 1323
BseRI	GAGGAG	4 cut(s)	97, 112, 283, 667
BseSI	GKGCMC	1 cut(s)	1450
BseXI	GCAGC	2 cut(s)	958, 1264
BsgI	GTGCAG	1 cut(s)	1143
Bsh1236I	CGCG	1 cut(s)	954
BshFI	GGCC	2 cut(s)	1021, 1505
BshVI	ATCGAT	1 cut(s)	501
BsiHKAI	GWGCWC	1 cut(s)	1450
BsiHKCI	CYCGRG	2 cut(s)	904, 1395
BsiSI	CCGG	1 cut(s)	16
BslFI	GGGAC	4 cut(s)	137, 1048, 1147, 1473
BslI	CCNNNNNNNGG	6 cut(s)	184, 541, 580, 1017, 1251, 1424
BsmAI	GTCTC	4 cut(s)	255, 779, 851, 857
BsmFI	GGGAC	4 cut(s)	137, 1048, 1147, 1473
BsnI	GGCC	2 cut(s)	1021, 1505
Bso31I	GGTCTC	1 cut(s)	779
BsoBI	CYCGRG	2 cut(s)	904, 1395
Bsp119I	TTCGAA	2 cut(s)	91, 1511
Bsp1286I	GDGCHC	1 cut(s)	1450
BspACI	CCGC	6 cut(s)	22, 25, 952, 954, 1259, 1506
BspANI	GGCC	2 cut(s)	1021, 1505
BspCNI	CTCAG	3 cut(s)	624, 1159, 1447
BspDI	ATCGAT	1 cut(s)	501
BspFNI	CGCG	1 cut(s)	954
BspLI	GGNNCC	3 cut(s)	493, 673, 1461
BspMI	ACCTGC	1 cut(s)	1471
BspPI	GGATC	4 cut(s)	214, 366, 403, 1269
BspT104I	TTCGAA	2 cut(s)	91, 1511
BspTNI	GGTCTC	1 cut(s)	779
BsrDI	GCAATG	1 cut(s)	297
BsrFI	RCCGGY	1 cut(s)	15
BsrI	ACTGG	2 cut(s)	708, 1323
BssAI	RCCGGY	1 cut(s)	15
BssECI	CCNNGG	4 cut(s)	952, 984, 1022, 1394
BssT1I	CCWWGG	1 cut(s)	984
Bst2UI	CCWGG	2 cut(s)	621, 1023
Bst4CI	ACNGT	5 cut(s)	66, 128, 612, 1121, 1130
Bst6I	CTCTTC	2 cut(s)	430, 800
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstBAI	YACGTR	1 cut(s)	1451
BstBI	TTCGAA	2 cut(s)	91, 1511
BstC8I	GCNNGC	3 cut(s)	571, 725, 872
BstDEI	CTNAG	4 cut(s)	313, 632, 1146, 1455
BstDSI	CCRYGG	1 cut(s)	952
BstF5I	GGATG	3 cut(s)	424, 832, 1261
BstFNI	CGCG	1 cut(s)	954
BstH2I	RGCGCY	1 cut(s)	1245
BstHHI	GCGC	1 cut(s)	1244
BstMAI	GTCTC	4 cut(s)	255, 779, 851, 857
BstMWI	GCNNNNNNNGC	3 cut(s)	729, 968, 1345
BstNI	CCWGG	2 cut(s)	621, 1023
BstNSI	RCATGY	1 cut(s)	453
BstSCI	CCNGG	2 cut(s)	619, 1021
BstSLI	GKGCMC	1 cut(s)	1450
BstUI	CGCG	1 cut(s)	954
BstV1I	GCAGC	2 cut(s)	958, 1264
BstV2I	GAAGAC	1 cut(s)	521
BstX2I	RGATCY	2 cut(s)	371, 395
BstXI	CCANNNNNNTGG	2 cut(s)	382, 917
BstYI	RGATCY	2 cut(s)	371, 395
Bsu15I	ATCGAT	1 cut(s)	501
BsuI	GTATCC	1 cut(s)	54
BsuRI	GGCC	2 cut(s)	1021, 1505
BsuTUI	ATCGAT	1 cut(s)	501
BtgI	CCRYGG	1 cut(s)	952
BtsCI	GGATG	3 cut(s)	424, 832, 1261
BtsI	GCAGTG	2 cut(s)	1219, 1229
BtsIMutI	CAGTG	5 cut(s)	45, 629, 1135, 1219, 1229
BveI	ACCTGC	1 cut(s)	1471
Cac8I	GCNNGC	3 cut(s)	571, 725, 872
CfoI	GCGC	1 cut(s)	1244
Cfr10I	RCCGGY	1 cut(s)	15
Cfr13I	GGNCC	5 cut(s)	175, 544, 1415, 1460, 1503
Cfr42I	CCGCGG	1 cut(s)	955
ClaI	ATCGAT	1 cut(s)	501
CseI	GACGC	1 cut(s)	248
CviAII	CATG	6 cut(s)	376, 450, 575, 680, 1192, 1345
DdeI	CTNAG	4 cut(s)	313, 632, 1146, 1455
Eam1104I	CTCTTC	2 cut(s)	430, 800
EarI	CTCTTC	2 cut(s)	430, 800
EciI	GGCGGA	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	984
Eco31I	GGTCTC	1 cut(s)	779
Eco47I	GGWCC	4 cut(s)	175, 544, 1415, 1460
Eco57I	CTGAAG	4 cut(s)	91, 495, 840, 1497
Eco72I	CACGTG	1 cut(s)	1451
Eco88I	CYCGRG	2 cut(s)	904, 1395
EcoO109I	RGGNCCY	3 cut(s)	544, 1415, 1460
EcoRII	CCWGG	2 cut(s)	619, 1021
EcoT14I	CCWWGG	1 cut(s)	984
ErhI	CCWWGG	1 cut(s)	984
FaeI	CATG	6 cut(s)	379, 453, 578, 683, 1195, 1348
FalI	AAGNNNNNCTT	2 cut(s)	86, 118
FaqI	GGGAC	4 cut(s)	137, 1048, 1147, 1473
FatI	CATG	6 cut(s)	375, 449, 574, 679, 1191, 1344
FauI	CCCGC	1 cut(s)	959
FbaI	TGATCA	1 cut(s)	141
Fnu4HI	GCNGC	4 cut(s)	23, 972, 1278, 1506
FokI	GGATG	3 cut(s)	411, 839, 1268
Fsp4HI	GCNGC	4 cut(s)	23, 972, 1278, 1506
FspBI	CTAG	2 cut(s)	750, 1107
GlaI	GCGC	1 cut(s)	1243
GluI	GCNGC	4 cut(s)	23, 972, 1278, 1506
GsuI	CTGGAG	4 cut(s)	206, 478, 761, 1340
HaeII	RGCGCY	1 cut(s)	1245
HaeIII	GGCC	2 cut(s)	1021, 1505
HapII	CCGG	1 cut(s)	16
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	1 cut(s)	1244
Hin1II	CATG	6 cut(s)	379, 453, 578, 683, 1195, 1348
Hin6I	GCGC	1 cut(s)	1242
HinP1I	GCGC	1 cut(s)	1242
HindIII	AAGCTT	1 cut(s)	868
HinfI	GANTC	5 cut(s)	248, 498, 1139, 1163, 1201
HpaII	CCGG	1 cut(s)	16
HphI	GGTGA	3 cut(s)	202, 299, 524
Hpy166II	GTNNAC	3 cut(s)	691, 701, 1448
Hpy188I	TCNGA	8 cut(s)	52, 294, 359, 416, 676, 820, 1149, 1162
Hpy188III	TCNNGA	8 cut(s)	428, 495, 933, 1090, 1253, 1265, 1379, 1475
Hpy8I	GTNNAC	3 cut(s)	691, 701, 1448
HpyAV	CCTTC	4 cut(s)	25, 67, 634, 662
HpyCH4III	ACNGT	5 cut(s)	66, 128, 612, 1121, 1130
HpyCH4IV	ACGT	2 cut(s)	739, 1450
HpyCH4V	TGCA	8 cut(s)	302, 683, 1124, 1234, 1348, 1368, 1448, 1466
HpyF10VI	GCNNNNNNNGC	3 cut(s)	729, 968, 1345
HpyF3I	CTNAG	4 cut(s)	313, 632, 1146, 1455
HpySE526I	ACGT	2 cut(s)	739, 1450
Hsp92II	CATG	6 cut(s)	379, 453, 578, 683, 1195, 1348
HspAI	GCGC	1 cut(s)	1242
Ksp22I	TGATCA	1 cut(s)	141
KspI	CCGCGG	1 cut(s)	955
LmnI	GCTCC	3 cut(s)	99, 497, 677
Lsp1109I	GCAGC	2 cut(s)	958, 1264
LweI	GCATC	2 cut(s)	1246, 1475
MaeI	CTAG	2 cut(s)	750, 1107
MaeII	ACGT	2 cut(s)	739, 1450
MaeIII	GTNAC	8 cut(s)	135, 190, 236, 456, 587, 977, 988, 1332
MfeI	CAATTG	2 cut(s)	939, 1058
MflI	RGATCY	2 cut(s)	371, 395
MhlI	GDGCHC	1 cut(s)	1450
MlyI	GAGTC	1 cut(s)	257
MroXI	GAANNNNTTC	1 cut(s)	814
MseI	TTAA	6 cut(s)	215, 483, 800, 834, 840, 995
MslI	CAYNNNNRTG	3 cut(s)	380, 448, 634
MspA1I	CMGCKG	1 cut(s)	954
MspI	CCGG	1 cut(s)	16
MspR9I	CCNGG	2 cut(s)	621, 1023
MunI	CAATTG	2 cut(s)	939, 1058
MvaI	CCWGG	2 cut(s)	621, 1023
MvnI	CGCG	1 cut(s)	954
MwoI	GCNNNNNNNGC	3 cut(s)	729, 968, 1345
NlaIII	CATG	6 cut(s)	379, 453, 578, 683, 1195, 1348
NlaIV	GGNNCC	3 cut(s)	493, 673, 1461
NmuCI	GTSAC	4 cut(s)	190, 456, 587, 977
NspI	RCATGY	1 cut(s)	453
NspV	TTCGAA	2 cut(s)	91, 1511
OliI	CACNNNNGTG	1 cut(s)	634
PaeR7I	CTCGAG	1 cut(s)	904
PdmI	GAANNNNTTC	1 cut(s)	814
PfeI	GAWTC	4 cut(s)	498, 1139, 1163, 1201
PflMI	CCANNNNNTGG	1 cut(s)	184
PkrI	GCNGC	4 cut(s)	24, 973, 1279, 1507
PleI	GAGTC	1 cut(s)	256
PmaCI	CACGTG	1 cut(s)	1451
PmlI	CACGTG	1 cut(s)	1451
PpsI	GAGTC	1 cut(s)	256
Ppu21I	YACGTR	1 cut(s)	1451
PpuMI	RGGWCCY	3 cut(s)	544, 1415, 1460
PsiI	TTATAA	1 cut(s)	230
Psp5II	RGGWCCY	3 cut(s)	544, 1415, 1460
Psp6I	CCWGG	2 cut(s)	619, 1021
PspCI	CACGTG	1 cut(s)	1451
PspGI	CCWGG	2 cut(s)	619, 1021
PspN4I	GGNNCC	3 cut(s)	493, 673, 1461
PspPI	GGNCC	5 cut(s)	175, 544, 1415, 1460, 1503
PspPPI	RGGWCCY	3 cut(s)	544, 1415, 1460
PspXI	VCTCGAGB	1 cut(s)	904
PsuI	RGATCY	2 cut(s)	371, 395
RseI	CAYNNNNRTG	3 cut(s)	380, 448, 634
SacII	CCGCGG	1 cut(s)	955
SaqAI	TTAA	6 cut(s)	215, 483, 800, 834, 840, 995
SatI	GCNGC	4 cut(s)	23, 972, 1278, 1506
Sau96I	GGNCC	5 cut(s)	175, 544, 1415, 1460, 1503
SchI	GAGTC	1 cut(s)	257
ScrFI	CCNGG	2 cut(s)	621, 1023
SduI	GDGCHC	1 cut(s)	1450
SfaNI	GCATC	2 cut(s)	1246, 1475
Sfr274I	CTCGAG	1 cut(s)	904
Sfr303I	CCGCGG	1 cut(s)	955
SfuI	TTCGAA	2 cut(s)	91, 1511
SgrBI	CCGCGG	1 cut(s)	955
SinI	GGWCC	4 cut(s)	175, 544, 1415, 1460
SlaI	CTCGAG	1 cut(s)	904
SmiMI	CAYNNNNRTG	3 cut(s)	380, 448, 634
SmlI	CTYRAG	3 cut(s)	79, 904, 1237
SmoI	CTYRAG	3 cut(s)	79, 904, 1237
SsiI	CCGC	6 cut(s)	22, 25, 952, 954, 1259, 1506
SspMI	CTAG	2 cut(s)	750, 1107
StyD4I	CCNGG	2 cut(s)	619, 1021
StyI	CCWWGG	1 cut(s)	984
TaaI	ACNGT	5 cut(s)	66, 128, 612, 1121, 1130
TaiI	ACGT	2 cut(s)	742, 1453
TaqI	TCGA	6 cut(s)	91, 501, 905, 1378, 1511, 1519
TauI	GCSGC	2 cut(s)	25, 1508
TfiI	GAWTC	4 cut(s)	498, 1139, 1163, 1201
Tru1I	TTAA	6 cut(s)	215, 483, 800, 834, 840, 995
Tru9I	TTAA	6 cut(s)	215, 483, 800, 834, 840, 995
TscAI	CASTG	5 cut(s)	45, 636, 1135, 1219, 1229
TseFI	GTSAC	4 cut(s)	190, 456, 587, 977
TseI	GCWGC	2 cut(s)	971, 1277
Tsp45I	GTSAC	4 cut(s)	190, 456, 587, 977
TspDTI	ATGAA	5 cut(s)	818, 843, 1044, 1197, 1284
TspGWI	ACGGA	1 cut(s)	214
TspRI	CASTG	5 cut(s)	45, 636, 1135, 1219, 1229
Van91I	CCANNNNNTGG	1 cut(s)	184
VneI	GTGCAC	1 cut(s)	1446
VpaK11BI	GGWCC	4 cut(s)	175, 544, 1415, 1460
XapI	RAATTY	3 cut(s)	338, 479, 625
XceI	RCATGY	1 cut(s)	453
XhoI	CTCGAG	1 cut(s)	904
XmnI	GAANNNNTTC	1 cut(s)	814
XspI	CTAG	2 cut(s)	750, 1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.