Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0014436

Physical Location & Seq

Genomic Coordinates Forward (+)

11807353 .. 11809614

Gene Structure 2262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGAATCCTTCTTTTTACTTATCCAACGCAACCTCCCCCTCTCCTAGTCCTATACCTAGGTTATTGAAATTAACCAAGCTAAAATCCAACTTGATGCTATCCTCTCCACCTTCTAATCATTTTCTATCCCCCATTCTCCCACAGTTAAAAACTCGAAGACCCATCTATCTATCCATCTATCTGCTGTCCAAAACAACCCAAGACTGTGCAGACACATACACACACACTCTCTCTCTCTCTTCTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTCCCTCTCTGAAATCAATCTCCAATCTGATCCCCATCAATCTTTCACCATCTCAACCACCGCCAGAACCTCAACACCTACAACAACCACCACCACTTCTAGCAGCTCCAGATCCTCCTTCCTCAGTAACCGTCCTCACCCTAATTACCCCCACCAAGACGACGACGTTGGAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTCTCCTCGTCTTCTTCCAAACACTACTTCCCATCGAATCACCCAACCCCTCCCACCCCAAACCCTCTCCCCACCATCACCACCACTCCCACCCCAGCCGACTTCTCCTTCTCCCCCTCCCTCGTCAACTTCGAGCTCTCCAACGACAAGTGGGCCCCGGAACTCCTCTTGGAGACCGCCAGAGCCATCGCTGACAAGAACAGCTCCCACGTCCAGCAGCTCATGTGGATGCTCAACGAGCTCGGCAGTCCGTACGGAGACACCGACCAGAAACTCGCCTCCTATTTCCTCCAAGCTTTGTTCAGCCGCATGACCGACTCCGGTGACAGCTGCTACCGAACCCTAATATCCGCCTCGGAGAAAACTTGTTCCTTCGAGTCCACAAGAAAAACCGTGCTCAAGTTTCAGGAGGTCAGCCCTTGGACCACTTTCGGACACGTGCCAAAGCTTCACATAATCGACATCAGCAACACTTACTGCACCCAATGGCCGACTCTGCTCGAGGCGCTGGCCACTCGAACTGATGAGACGCCGCACTTGCGTCTCACCACTGTTGTGGCTAACAGAGCCAACGACGGTTCTGGTGGCGCAGCCGCGCAGAAAGTAATGAAGGAAATTGGCGCGAGGATGGAAAAGTTTGCCCGGTTGATGGGCGTGCCTTTCAAATTCAACGCCGTCCATCACTCTGGCGATCTTTCCGAGCTGAATTTATCAGAATTCGATATCAGAGACGATGAGGCCTTGGCAATCAACTGCGTCGGCACTCTACATTCGGTTCAGTCCGTCGGGAACCGCCGCGATTATCTTGTTTCGGCGTTTCGGAGCTTGAGGCCGAGGATCGATCTCATACTCTCGTTGAGGAAGAGGTTCGATCTCGACGTTGGAGTTGACGGGATTGACTTCGTTCATGGGTTTGAAGAGTGCTTGAGATGGTTTAGGGTTTACTTCGAGGCATTGGACGAGAGCTTTTCCAGGACCAGCAACGAGCGGTTGATACTCGAGCGAGCCGCCGGGCGAGCGGTAGTGGATTTGGTGGCCTGCTCACCTTCGGAGTCGGTGGAGCGGCGCGAGACCGCCAGTCGCTGGTCGAGGCGTATGCATGGGGCGGGGTTTAGTCCTGCGATGTTTAGTGATGAGGTGTGTGATGACGTACGCGCCTTGTTGAGGAGGTATAAGGAAGGTTGGGCAATGACACAGACCAGCCGGTGGTTTGGGCTAGTGCTTGGAGGCCTTGATGATACGGTGGCTATTGATCGATATATTTCACGTGTTTTGGTTTTTCTGGCACGTGCATGGAATGGCACTTGTGTTCGGAAAAGGAGGGAGATAATATTTCGTCGACAACCTTGTTATGGTTTTGAATTTTCACCATCTTGTCTGCAAGTCCCATTTTTAGTTACCAAATCAACTCCCACTAATCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007346 GO:0007389 GO:0008150 GO:0008356 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045786 GO:0045930 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051171 GO:0051252 GO:0051301 GO:0051726 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0060255 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

639

Amino Acids

71.63

Weight (kDa)

6.97

Isoelectric Point (pI)

54.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	218 - 568	7.1e-78	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37650
fragaria_vesca	FvH4_1g17690
malus_domestica	MD02G1185900.v1.1 MD15G1307800.v1.1
prunus_persica	Prupe.6G220800_v2.0.a1
pyrus_communis	pycom02g15090 pycom15g26030
rosa_chinensis	RchiOBHm_Chr2g0108031
rosa_laevigata	RLG00000017634
rosa_multiflora	Rmu_sc0001484.1_g000021
rosa_roxburghii	Rroxscaffold_2G00135710
rosa_rugosa	Rorug02G0149800
rosa_samantha	Rh2AG198800 Rh2BG211700 Rh2CG203400 Rh2DG206400
rosa_wichuraiana	Rw2G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1575, 1698
AccBSI	CCGCTC	3 cut(s)	1480, 1511, 1555
AccI	GTMKAC	1 cut(s)	1831
AccII	CGCG	5 cut(s)	1088, 1115, 1290, 1560, 1647
AclWI	GGATC	3 cut(s)	308, 390, 1337
AcoI	YGGCCR	2 cut(s)	980, 1002
AcsI	RAATTY	4 cut(s)	1157, 1198, 1208, 1853
AcvI	CACGTG	3 cut(s)	931, 1760, 1781
AcyI	GRCGYC	1 cut(s)	1022
AfaI	GTAC	2 cut(s)	746, 1644
AfiI	CCNNNNNNNGG	5 cut(s)	1141, 1575, 1656, 1698, 1844
AflIII	ACRYGT	2 cut(s)	928, 1759
AgsI	TTSAA	6 cut(s)	67, 469, 1156, 1162, 1409, 1853
AhdI	GACNNNNNGTC	1 cut(s)	1569
AjiI	CACGTC	1 cut(s)	703
AjnI	CCWGG	1 cut(s)	1463
AjuI	GAANNNNNNNTTGG	2 cut(s)	503, 535
AleI	CACNNNNGTG	1 cut(s)	1046
Alw21I	GWGCWC	3 cut(s)	630, 735, 891
Alw26I	GTCTC	6 cut(s)	659, 744, 1013, 1040, 1215, 1556
AlwI	GGATC	3 cut(s)	308, 390, 1337
AlwNI	CAGNNNCTG	1 cut(s)	1575
Ama87I	CYCGRG	2 cut(s)	992, 1490
AoxI	GGCC	7 cut(s)	645, 980, 1002, 1230, 1322, 1527, 1720
ApaI	GGGCCC	1 cut(s)	649
ApeKI	GCWGC	4 cut(s)	387, 709, 822, 1082
ApoI	RAATTY	4 cut(s)	1157, 1198, 1208, 1853
Asp700I	GAANNNNTTC	1 cut(s)	1358
AspA2I	CCTAGG	1 cut(s)	56
AspLEI	GCGC	6 cut(s)	1000, 1082, 1090, 1115, 1560, 1649
AspS9I	GGNCC	4 cut(s)	645, 646, 915, 1467
AsuC2I	CCSGG	3 cut(s)	650, 1135, 1504
AsuHPI	GGTGA	8 cut(s)	322, 413, 524, 562, 827, 1030, 1527, 1851
AvaI	CYCGRG	2 cut(s)	992, 1490
AvaII	GGWCC	2 cut(s)	915, 1467
AvrII	CCTAGG	1 cut(s)	56
BaeGI	GKGCMC	1 cut(s)	649
BalI	TGGCCA	1 cut(s)	1004
BanII	GRGCYC	3 cut(s)	630, 649, 735
BbrPI	CACGTG	3 cut(s)	931, 1760, 1781
BbsI	GAAGAC	3 cut(s)	163, 495, 495
Bbv12I	GWGCWC	3 cut(s)	630, 735, 891
BbvI	GCAGC	4 cut(s)	399, 721, 809, 1094
BceAI	ACGGC	1 cut(s)	1151
BcgI	CGANNNNNNTGC	2 cut(s)	1570, 1604
BciT130I	CCWGG	1 cut(s)	1465
BcnI	CCSGG	3 cut(s)	650, 1135, 1504
BcoDI	GTCTC	6 cut(s)	659, 744, 1013, 1040, 1215, 1556
BfaI	CTAG	4 cut(s)	45, 57, 384, 1709
BfoI	RGCGCY	1 cut(s)	1001
BlnI	CCTAGG	1 cut(s)	56
Bme1390I	CCNGG	4 cut(s)	650, 1135, 1465, 1504
Bme18I	GGWCC	2 cut(s)	915, 1467
BmeRI	GACNNNNNGTC	1 cut(s)	1569
BmeT110I	CYCGRG	2 cut(s)	992, 1490
BmgBI	CACGTC	1 cut(s)	703
BmgT120I	GGNCC	4 cut(s)	645, 646, 915, 1467
BmiI	GGNNCC	3 cut(s)	647, 648, 1283
BmrFI	CCNGG	4 cut(s)	650, 1135, 1465, 1504
BmsI	GCATC	2 cut(s)	84, 711
BpiI	GAAGAC	3 cut(s)	163, 495, 495
BpmI	CTGGAG	1 cut(s)	376
BpuEI	CTTGAG	3 cut(s)	875, 1339, 1438
BpuMI	CCSGG	3 cut(s)	650, 1135, 1504
Bsa29I	ATCGAT	2 cut(s)	1332, 1747
BsaAI	YACGTR	3 cut(s)	931, 1760, 1781
BsaBI	GATNNNNATC	1 cut(s)	318
BsaHI	GRCGYC	1 cut(s)	1022
BsaI	GGTCTC	2 cut(s)	659, 1556
BsaJI	CCNNGG	6 cut(s)	56, 648, 846, 911, 1233, 1325
BsaWI	WCCGGW	1 cut(s)	812
BsaXI	ACNNNNNCTCC	4 cut(s)	17, 47, 562, 592
Bsc4I	CCNNNNNNNGG	5 cut(s)	1141, 1575, 1656, 1698, 1844
Bse118I	RCCGGY	1 cut(s)	1695
Bse1I	ACTGG	1 cut(s)	1569
Bse3DI	GCAATG	1 cut(s)	1686
Bse8I	GATNNNNATC	1 cut(s)	318
BseBI	CCWGG	1 cut(s)	1465
BseCI	ATCGAT	2 cut(s)	1332, 1747
BseDI	CCNNGG	6 cut(s)	56, 648, 846, 911, 1233, 1325
BseGI	GGATG	3 cut(s)	487, 726, 1125
BseJI	GATNNNNATC	1 cut(s)	318
BseLI	CCNNNNNNNGG	5 cut(s)	1141, 1575, 1656, 1698, 1844
BseMI	GCAATG	1 cut(s)	1686
BseMII	CTCAG	1 cut(s)	421
BseNI	ACTGG	1 cut(s)	1569
BseRI	GAGGAG	3 cut(s)	487, 647, 1672
BseSI	GKGCMC	1 cut(s)	649
BseXI	GCAGC	4 cut(s)	399, 721, 809, 1094
BseYI	CCCAGC	1 cut(s)	586
BsgI	GTGCAG	2 cut(s)	228, 955
Bsh1236I	CGCG	5 cut(s)	1088, 1115, 1290, 1560, 1647
BshFI	GGCC	7 cut(s)	647, 982, 1004, 1232, 1324, 1529, 1722
BshVI	ATCGAT	2 cut(s)	1332, 1747
BsiHKAI	GWGCWC	3 cut(s)	630, 735, 891
BsiHKCI	CYCGRG	2 cut(s)	992, 1490
BsiSI	CCGG	5 cut(s)	650, 813, 1135, 1503, 1696
BsiWI	CGTACG	2 cut(s)	744, 1642
BslFI	GGGAC	1 cut(s)	1862
BslI	CCNNNNNNNGG	5 cut(s)	1141, 1575, 1656, 1698, 1844
BsmAI	GTCTC	6 cut(s)	659, 744, 1013, 1040, 1215, 1556
BsmBI	CGTCTC	3 cut(s)	1013, 1040, 1215
BsmFI	GGGAC	1 cut(s)	1862
BsmI	GAATGC	1 cut(s)	467
BsnI	GGCC	7 cut(s)	647, 982, 1004, 1232, 1324, 1529, 1722
Bso31I	GGTCTC	2 cut(s)	659, 1556
BsoBI	CYCGRG	2 cut(s)	992, 1490
Bsp120I	GGGCCC	1 cut(s)	645
Bsp1286I	GDGCHC	4 cut(s)	630, 649, 735, 891
Bsp143I	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
BspANI	GGCC	7 cut(s)	647, 982, 1004, 1232, 1324, 1529, 1722
BspCNI	CTCAG	1 cut(s)	420
BspDI	ATCGAT	2 cut(s)	1332, 1747
BspFNI	CGCG	5 cut(s)	1088, 1115, 1290, 1560, 1647
BspLI	GGNNCC	3 cut(s)	647, 648, 1283
BspPI	GGATC	3 cut(s)	308, 390, 1337
BspTNI	GGTCTC	2 cut(s)	659, 1556
BsrBI	CCGCTC	3 cut(s)	1480, 1511, 1555
BsrDI	GCAATG	1 cut(s)	1686
BsrFI	RCCGGY	1 cut(s)	1695
BsrI	ACTGG	1 cut(s)	1569
BssAI	RCCGGY	1 cut(s)	1695
BssECI	CCNNGG	6 cut(s)	56, 648, 846, 911, 1233, 1325
BssMI	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
BssNI	GRCGYC	1 cut(s)	1022
BssT1I	CCWWGG	3 cut(s)	56, 911, 1233
Bst2UI	CCWGG	1 cut(s)	1465
Bst4CI	ACNGT	7 cut(s)	144, 206, 416, 886, 1045, 1070, 1735
Bst6I	CTCTTC	3 cut(s)	244, 1349, 1404
BstACI	GRCGYC	1 cut(s)	1022
BstBAI	YACGTR	3 cut(s)	931, 1760, 1781
BstC8I	GCNNGC	5 cut(s)	1002, 1148, 1497, 1509, 1531
BstDEI	CTNAG	1 cut(s)	407
BstENI	CCTNNNNNAGG	1 cut(s)	1654
BstF5I	GGATG	3 cut(s)	487, 726, 1125
BstFNI	CGCG	5 cut(s)	1088, 1115, 1290, 1560, 1647
BstH2I	RGCGCY	1 cut(s)	1001
BstHHI	GCGC	6 cut(s)	1000, 1082, 1090, 1115, 1560, 1649
BstKTI	GATC	7 cut(s)	316, 398, 1186, 1332, 1336, 1366, 1747
BstMAI	GTCTC	6 cut(s)	659, 744, 1013, 1040, 1215, 1556
BstMBI	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
BstMWI	GCNNNNNNNGC	6 cut(s)	730, 988, 997, 1030, 1058, 1508
BstNI	CCWGG	1 cut(s)	1465
BstSCI	CCNGG	4 cut(s)	648, 1133, 1463, 1502
BstSLI	GKGCMC	1 cut(s)	649
BstUI	CGCG	5 cut(s)	1088, 1115, 1290, 1560, 1647
BstV1I	GCAGC	4 cut(s)	399, 721, 809, 1094
BstV2I	GAAGAC	3 cut(s)	163, 495, 495
BstX2I	RGATCY	1 cut(s)	395
BstXI	CCANNNNNNTGG	2 cut(s)	1048, 1178
BstYI	RGATCY	1 cut(s)	395
Bsu15I	ATCGAT	2 cut(s)	1332, 1747
BsuRI	GGCC	7 cut(s)	647, 982, 1004, 1232, 1324, 1529, 1722
BsuTUI	ATCGAT	2 cut(s)	1332, 1747
BtgZI	GCGATG	2 cut(s)	664, 1628
BtrI	CACGTC	1 cut(s)	703
BtsCI	GGATG	3 cut(s)	487, 726, 1125
BtsIMutI	CAGTG	1 cut(s)	1041
Cac8I	GCNNGC	5 cut(s)	1002, 1148, 1497, 1509, 1531
CaiI	CAGNNNCTG	1 cut(s)	1575
CfoI	GCGC	6 cut(s)	1000, 1082, 1090, 1115, 1560, 1649
Cfr10I	RCCGGY	1 cut(s)	1695
Cfr13I	GGNCC	4 cut(s)	645, 646, 915, 1467
ClaI	ATCGAT	2 cut(s)	1332, 1747
CseI	GACGC	3 cut(s)	1022, 1030, 1237
Csp6I	GTAC	2 cut(s)	745, 1643
CviAII	CATG	7 cut(s)	478, 715, 802, 1400, 1592, 1785, 1914
CviQI	GTAC	2 cut(s)	745, 1643
DdeI	CTNAG	1 cut(s)	407
DpnI	GATC	7 cut(s)	315, 397, 1185, 1331, 1335, 1365, 1746
DpnII	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
DriI	GACNNNNNGTC	1 cut(s)	1569
EaeI	YGGCCR	2 cut(s)	980, 1002
Eam1104I	CTCTTC	3 cut(s)	244, 1349, 1404
Eam1105I	GACNNNNNGTC	1 cut(s)	1569
EarI	CTCTTC	3 cut(s)	244, 1349, 1404
EciI	GGCGGA	1 cut(s)	832
Ecl136II	GAGCTC	2 cut(s)	628, 733
Eco130I	CCWWGG	3 cut(s)	56, 911, 1233
Eco147I	AGGCCT	2 cut(s)	1232, 1722
Eco24I	GRGCYC	3 cut(s)	630, 649, 735
Eco31I	GGTCTC	2 cut(s)	659, 1556
Eco32I	GATATC	1 cut(s)	1216
Eco47I	GGWCC	2 cut(s)	915, 1467
Eco53kI	GAGCTC	2 cut(s)	628, 733
Eco72I	CACGTG	3 cut(s)	931, 1760, 1781
Eco88I	CYCGRG	2 cut(s)	992, 1490
EcoICRI	GAGCTC	2 cut(s)	628, 733
EcoNI	CCTNNNNNAGG	1 cut(s)	1654
EcoO109I	RGGNCCY	1 cut(s)	646
EcoRI	GAATTC	1 cut(s)	1208
EcoRII	CCWGG	1 cut(s)	1463
EcoRV	GATATC	1 cut(s)	1216
EcoT14I	CCWWGG	3 cut(s)	56, 911, 1233
EcoT22I	ATGCAT	1 cut(s)	1593
EcoT38I	GRGCYC	3 cut(s)	630, 649, 735
ErhI	CCWWGG	3 cut(s)	56, 911, 1233
Esp3I	CGTCTC	3 cut(s)	1013, 1040, 1215
FaeI	CATG	7 cut(s)	481, 718, 805, 1403, 1595, 1788, 1917
FaqI	GGGAC	1 cut(s)	1862
FatI	CATG	7 cut(s)	477, 714, 801, 1399, 1591, 1784, 1913
FauI	CCCGC	1 cut(s)	1591
FblI	GTMKAC	1 cut(s)	1831
FokI	GGATG	3 cut(s)	494, 733, 1132
FriOI	GRGCYC	3 cut(s)	630, 649, 735
FspBI	CTAG	4 cut(s)	45, 57, 384, 1709
GlaI	GCGC	6 cut(s)	999, 1081, 1089, 1114, 1559, 1648
GsaI	CCCAGC	1 cut(s)	590
GsuI	CTGGAG	1 cut(s)	376
HaeII	RGCGCY	1 cut(s)	1001
HaeIII	GGCC	7 cut(s)	647, 982, 1004, 1232, 1324, 1529, 1722
HapII	CCGG	5 cut(s)	650, 813, 1135, 1503, 1696
HgaI	GACGC	3 cut(s)	1022, 1030, 1237
HhaI	GCGC	6 cut(s)	1000, 1082, 1090, 1115, 1560, 1649
Hin1I	GRCGYC	1 cut(s)	1022
Hin1II	CATG	7 cut(s)	481, 718, 805, 1403, 1595, 1788, 1917
Hin6I	GCGC	6 cut(s)	998, 1080, 1088, 1113, 1558, 1647
HinP1I	GCGC	6 cut(s)	998, 1080, 1088, 1113, 1558, 1647
HincII	GTYRAC	3 cut(s)	619, 1381, 1832
HindII	GTYRAC	3 cut(s)	619, 1381, 1832
HindIII	AAGCTT	2 cut(s)	786, 938
HinfI	GANTC	6 cut(s)	4, 529, 809, 869, 985, 1544
HpaII	CCGG	5 cut(s)	650, 813, 1135, 1503, 1696
HphI	GGTGA	8 cut(s)	322, 413, 524, 562, 827, 1030, 1527, 1851
Hpy166II	GTNNAC	5 cut(s)	619, 873, 1381, 1435, 1832
Hpy188III	TCNNGA	4 cut(s)	393, 899, 1279, 1367
Hpy8I	GTNNAC	5 cut(s)	619, 873, 1381, 1435, 1832
Hpy99I	CGWCG	7 cut(s)	449, 452, 1070, 1253, 1280, 1373, 1833
HpyAV	CCTTC	8 cut(s)	18, 120, 412, 610, 874, 1096, 1548, 1664
HpyCH4III	ACNGT	7 cut(s)	144, 206, 416, 886, 1045, 1070, 1735
HpyCH4IV	ACGT	7 cut(s)	450, 702, 930, 1371, 1641, 1759, 1780
HpyCH4V	TGCA	5 cut(s)	209, 972, 1591, 1784, 1873
HpyF10VI	GCNNNNNNNGC	6 cut(s)	730, 988, 997, 1030, 1058, 1508
HpyF3I	CTNAG	1 cut(s)	407
HpySE526I	ACGT	7 cut(s)	450, 702, 930, 1371, 1641, 1759, 1780
Hsp92I	GRCGYC	1 cut(s)	1022
Hsp92II	CATG	7 cut(s)	481, 718, 805, 1403, 1595, 1788, 1917
HspAI	GCGC	6 cut(s)	998, 1080, 1088, 1113, 1558, 1647
Kzo9I	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
LmnI	GCTCC	4 cut(s)	395, 701, 1314, 1552
Lsp1109I	GCAGC	4 cut(s)	399, 721, 809, 1094
LweI	GCATC	2 cut(s)	84, 711
MaeI	CTAG	4 cut(s)	45, 57, 384, 1709
MaeII	ACGT	7 cut(s)	450, 702, 930, 1371, 1641, 1759, 1780
MaeIII	GTNAC	3 cut(s)	410, 815, 1888
MalI	GATC	7 cut(s)	315, 397, 1185, 1331, 1335, 1365, 1746
MbiI	CCGCTC	3 cut(s)	1480, 1511, 1555
MboI	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
MflI	RGATCY	1 cut(s)	395
MhlI	GDGCHC	4 cut(s)	630, 649, 735, 891
MlsI	TGGCCA	1 cut(s)	1004
MluCI	AATT	7 cut(s)	68, 427, 1107, 1157, 1198, 1208, 1853
MluNI	TGGCCA	1 cut(s)	1004
MlyI	GAGTC	4 cut(s)	803, 878, 979, 1553
MmeI	TCCRAC	5 cut(s)	48, 111, 433, 657, 1354
Mox20I	TGGCCA	1 cut(s)	1004
Mph1103I	ATGCAT	1 cut(s)	1593
MroXI	GAANNNNTTC	1 cut(s)	1358
MscI	TGGCCA	1 cut(s)	1004
MseI	TTAA	2 cut(s)	71, 146
MslI	CAYNNNNRTG	3 cut(s)	719, 1046, 1783
Msp20I	TGGCCA	1 cut(s)	1004
MspA1I	CMGCKG	1 cut(s)	822
MspI	CCGG	5 cut(s)	650, 813, 1135, 1503, 1696
MspR9I	CCNGG	4 cut(s)	650, 1135, 1465, 1504
Mva1269I	GAATGC	1 cut(s)	467
MvaI	CCWGG	1 cut(s)	1465
MvnI	CGCG	5 cut(s)	1088, 1115, 1290, 1560, 1647
MwoI	GCNNNNNNNGC	6 cut(s)	730, 988, 997, 1030, 1058, 1508
NciI	CCSGG	3 cut(s)	650, 1135, 1504
NdeII	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
NlaIII	CATG	7 cut(s)	481, 718, 805, 1403, 1595, 1788, 1917
NlaIV	GGNNCC	3 cut(s)	647, 648, 1283
NmeAIII	GCCGAG	2 cut(s)	714, 1350
NmuCI	GTSAC	1 cut(s)	815
NsiI	ATGCAT	1 cut(s)	1593
OliI	CACNNNNGTG	1 cut(s)	1046
PaeR7I	CTCGAG	2 cut(s)	992, 1490
PceI	AGGCCT	2 cut(s)	1232, 1722
PcsI	WCGNNNNNNNCGW	3 cut(s)	621, 753, 1368
PctI	GAATGC	1 cut(s)	467
PdmI	GAANNNNTTC	1 cut(s)	1358
PfeI	GAWTC	2 cut(s)	4, 529
Pfl23II	CGTACG	2 cut(s)	744, 1642
PflMI	CCANNNNNTGG	2 cut(s)	1575, 1698
PfoI	TCCNGGA	1 cut(s)	1463
PleI	GAGTC	4 cut(s)	803, 877, 979, 1552
PmaCI	CACGTG	3 cut(s)	931, 1760, 1781
PmlI	CACGTG	3 cut(s)	931, 1760, 1781
PpsI	GAGTC	4 cut(s)	803, 877, 979, 1552
Ppu21I	YACGTR	3 cut(s)	931, 1760, 1781
Psp124BI	GAGCTC	2 cut(s)	630, 735
Psp6I	CCWGG	1 cut(s)	1463
PspCI	CACGTG	3 cut(s)	931, 1760, 1781
PspFI	CCCAGC	1 cut(s)	586
PspGI	CCWGG	1 cut(s)	1463
PspLI	CGTACG	2 cut(s)	744, 1642
PspN4I	GGNNCC	3 cut(s)	647, 648, 1283
PspOMI	GGGCCC	1 cut(s)	645
PspPI	GGNCC	4 cut(s)	645, 646, 915, 1467
PspXI	VCTCGAGB	2 cut(s)	992, 1490
PstNI	CAGNNNCTG	1 cut(s)	1575
PsuI	RGATCY	1 cut(s)	395
PvuII	CAGCTG	1 cut(s)	822
RsaI	GTAC	2 cut(s)	746, 1644
RsaNI	GTAC	2 cut(s)	745, 1643
RseI	CAYNNNNRTG	3 cut(s)	719, 1046, 1783
SacI	GAGCTC	2 cut(s)	630, 735
SalI	GTCGAC	1 cut(s)	1830
SaqAI	TTAA	2 cut(s)	71, 146
Sau3AI	GATC	7 cut(s)	313, 395, 1183, 1329, 1333, 1363, 1744
Sau96I	GGNCC	4 cut(s)	645, 646, 915, 1467
SchI	GAGTC	4 cut(s)	803, 878, 979, 1553
ScrFI	CCNGG	4 cut(s)	650, 1135, 1465, 1504
SduI	GDGCHC	4 cut(s)	630, 649, 735, 891
SfaNI	GCATC	2 cut(s)	84, 711
Sfr274I	CTCGAG	2 cut(s)	992, 1490
SinI	GGWCC	2 cut(s)	915, 1467
SlaI	CTCGAG	2 cut(s)	992, 1490
SmiMI	CAYNNNNRTG	3 cut(s)	719, 1046, 1783
SmlI	CTYRAG	5 cut(s)	890, 992, 1318, 1417, 1490
SmoI	CTYRAG	5 cut(s)	890, 992, 1318, 1417, 1490
Sse9I	AATT	7 cut(s)	68, 427, 1107, 1157, 1198, 1208, 1853
SseBI	AGGCCT	2 cut(s)	1232, 1722
SspI	AATATT	1 cut(s)	1824
SspMI	CTAG	4 cut(s)	45, 57, 384, 1709
SstI	GAGCTC	2 cut(s)	630, 735
StuI	AGGCCT	2 cut(s)	1232, 1722
StyD4I	CCNGG	4 cut(s)	648, 1133, 1463, 1502
StyI	CCWWGG	3 cut(s)	56, 911, 1233
TaaI	ACNGT	7 cut(s)	144, 206, 416, 886, 1045, 1070, 1735
TaiI	ACGT	7 cut(s)	453, 705, 933, 1374, 1644, 1762, 1783
TaqII	GACCGA	1 cut(s)	821
TasI	AATT	7 cut(s)	68, 427, 1107, 1157, 1198, 1208, 1853
TauI	GCSGC	6 cut(s)	801, 1027, 1088, 1290, 1502, 1558
TfiI	GAWTC	2 cut(s)	4, 529
Tru1I	TTAA	2 cut(s)	71, 146
Tru9I	TTAA	2 cut(s)	71, 146
TscAI	CASTG	1 cut(s)	1048
TseFI	GTSAC	1 cut(s)	815
TseI	GCWGC	4 cut(s)	387, 709, 822, 1082
Tsp45I	GTSAC	1 cut(s)	815
TspDTI	ATGAA	5 cut(s)	17, 466, 498, 1115, 1388
TspGWI	ACGGA	3 cut(s)	732, 762, 1264
TspRI	CASTG	1 cut(s)	1048
Van91I	CCANNNNNTGG	2 cut(s)	1575, 1698
VpaK11BI	GGWCC	2 cut(s)	915, 1467
XagI	CCTNNNNNAGG	1 cut(s)	1654
XapI	RAATTY	4 cut(s)	1157, 1198, 1208, 1853
XhoI	CTCGAG	2 cut(s)	992, 1490
XmaJI	CCTAGG	1 cut(s)	56
XmiI	GTMKAC	1 cut(s)	1831
XmnI	GAANNNNTTC	1 cut(s)	1358
XspI	CTAG	4 cut(s)	45, 57, 384, 1709
Zsp2I	ATGCAT	1 cut(s)	1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.