Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0014436

Physical Location & Seq

Genomic Coordinates Forward (+)

19800562 .. 19803569

Gene Structure 3008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG203400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGATACCTTGTTTAGGCTAGTCACTCTTCAACAACAACAACAACAACAACAACAGCAACAACAATCTGATCAATCTTTCAATTCATCCACCAGAACCACCACCACCACTTCCAGCAGCTCCAGATCCTTCACTCACCACCCACAACACCACCAACACTACCCCCAACAAAACGACGTTGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTCTCCTCTTCTTCTTCTAAGGCTCACTACTATCCCACCCCACCAACCCCTACCCCGCCTCCGCCGCTCACCACCACGACGACCACTCCCACCCCCACCGATTTCTCCTTCTCCCCCGCCCACGACCTCCTCAACTTCGAATTCTCCTCCCCCAAGTGGGCCCCTGACCTCCTCTTAGAAACCGCCCGGGCCATTGCTGACAAGAACAGCGCAAGAGTTCAACAGCTCATGTGGATGCTCAACGAGCTCGGCTCTCCCTACGGCGACACCGATCAAAAACTCACCTCCTACTTCCTCCAGGCCCTCTTCAGCCGCATGACCGACTCCGGCGACCGCTGCTACCGGACCCTAGTCTCGGCCTCGGAGAAAACCTGCTCTTTCGAATCCACCAGGAAAATGGTCTTGAAATTTCAGGAGGTGAGTCCGTGGACTACATTCGGTCACGTCGCTTGTAACGGTGCAATTATGGAAGCCTTTGACGGTGAGGCCAAGCTTCACATAGTCGACATCAGCAACACTTACTGCACGCAGTGGCCGACTCTGCTGGAGGCTCTCGCCACCCGAACTGATGAGACGCCGCATCTGCGTCTCACCAGTATAGTCATCAGCAGAGCTGGAGATGGCTCTGCTGGCGTTGGCGCCACGCAAAAAGTAATGAAGGAAATTGGCGCCAGAATGGAGAAATTCGCGCGCTTAATGGGCGTGCCGTTCAAATTCAATGCGATCCAGCATTCCGGCGACCTCGCGGAGCTGAACTTGGCTGATTTGGATGTCAGGGACGATGAGGCCTTGGCCATCAACTGTGTTGGATCGTTACATTCAATCGTGGCCGTTGGAAACCGCCGTGATTATTTGATATCGGCTTTTCGGAGCTTAAAGCCGAGGATCATTACTGTTGTGGAGGAAGAAGCTGACCTAGACGTTGGAGTTGACGGGTTTGACTTCGTCCAAGGGTTTCAGGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCTCTGGACGAGAGCTTCGCCAGGACGAGTAACGAGAGGTTGATGCTCGAGCGGGCGGCCGGCCGAGCCATCGTTGACTTGGTGGCTTGTGCGCCGCCGGACTCCGTCGAGCGGCGCGAGTCGGCCACGAGCTGGTCGAGGCGTATGCATGGGGCCGGGTTCAGTCCAACTTCATTTAGTGATGAGGTGTGCGATGACGTACGGGCCTTGTTGCGGAGGTACAAGGAAGGTTGGTCAATGACGCAGTGTGGTGACTCCGTCGCCGGAATATTCTTGTCGTGGAAGGACCAGCCGGTGGTTTGGGCCAGCGCTTGGAGGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007346 GO:0007389 GO:0008150 GO:0008356 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045786 GO:0045930 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051171 GO:0051252 GO:0051301 GO:0051726 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0060255 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

510

Amino Acids

57.34

Weight (kDa)

5.26

Isoelectric Point (pI)

47.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	128 - 509	2.2e-103	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37650
fragaria_vesca	FvH4_1g17690
malus_domestica	MD02G1185900.v1.1 MD15G1307800.v1.1
prunus_persica	Prupe.6G220800_v2.0.a1
pyrus_communis	pycom02g15090 pycom15g26030
rosa_chinensis	RchiOBHm_Chr2g0108031
rosa_laevigata	RLG00000017634
rosa_multiflora	Rmu_sc0001484.1_g000021
rosa_roxburghii	Rroxscaffold_2G00135710
rosa_rugosa	Rorug02G0149800
rosa_samantha	Rh2AG198800 Rh2BG211700 Rh2CG203400 Rh2DG206400
rosa_wichuraiana	Rw2G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	596
AccB1I	GGYRCC	2 cut(s)	854, 884
AccB7I	CCANNNNNTGG	3 cut(s)	1341, 1504, 1521
AccBSI	CCGCTC	3 cut(s)	283, 1261, 1321
AccI	GTMKAC	1 cut(s)	720
AccII	CGCG	4 cut(s)	905, 907, 962, 1326
AclWI	GGATC	4 cut(s)	120, 934, 1033, 1109
AcoI	YGGCCR	6 cut(s)	749, 1008, 1044, 1266, 1270, 1332
AcsI	RAATTY	4 cut(s)	356, 623, 899, 929
AcuI	CTGAAG	1 cut(s)	508
AcyI	GRCGYC	3 cut(s)	791, 855, 885
AdeI	CACNNNGTG	1 cut(s)	747
AfaI	GTAC	2 cut(s)	1410, 1430
AfeI	AGCGCT	1 cut(s)	1519
AfiI	CCNNNNNNNGG	9 cut(s)	15, 372, 373, 571, 1320, 1341, 1422, 1504, 1521
AgsI	TTSAA	9 cut(s)	32, 82, 182, 193, 437, 622, 928, 934, 1038
AjiI	CACGTC	1 cut(s)	661
AjnI	CCWGG	3 cut(s)	513, 605, 1229
Alw21I	GWGCWC	1 cut(s)	465
Alw26I	GTCTC	3 cut(s)	574, 782, 809
AlwI	GGATC	4 cut(s)	120, 934, 1033, 1109
Ama87I	CYCGRG	2 cut(s)	402, 1256
Aor51HI	AGCGCT	1 cut(s)	1519
ApaI	GGGCCC	1 cut(s)	379
ApeKI	GCWGC	2 cut(s)	117, 552
ApoI	RAATTY	4 cut(s)	356, 623, 899, 929
ArsI	GACNNNNNNTTYG	2 cut(s)	1208, 1240
AspLEI	GCGC	8 cut(s)	428, 857, 887, 907, 909, 1303, 1326, 1520
AspS9I	GGNCC	9 cut(s)	375, 376, 405, 517, 561, 1362, 1413, 1495, 1512
AsuC2I	CCSGG	3 cut(s)	403, 404, 1366
AsuHPI	GGTGA	7 cut(s)	128, 277, 490, 646, 710, 799, 1472
AsuII	TTCGAA	2 cut(s)	354, 597
AvaI	CYCGRG	2 cut(s)	402, 1256
AvaII	GGWCC	2 cut(s)	561, 1495
BaeGI	GKGCMC	1 cut(s)	379
BalI	TGGCCA	1 cut(s)	1010
BanI	GGYRCC	2 cut(s)	854, 884
BanII	GRGCYC	2 cut(s)	379, 465
BauI	CACGAG	1 cut(s)	1336
BbsI	GAAGAC	1 cut(s)	219
Bbv12I	GWGCWC	1 cut(s)	465
BbvI	GCAGC	2 cut(s)	129, 539
BccI	CCATC	3 cut(s)	830, 1019, 1286
BceAI	ACGGC	4 cut(s)	493, 907, 1031, 1044
BcgI	CGANNNNNNTGC	2 cut(s)	1336, 1370
BciT130I	CCWGG	3 cut(s)	515, 607, 1231
BclI	TGATCA	1 cut(s)	70
BcnI	CCSGG	3 cut(s)	403, 404, 1366
BcoDI	GTCTC	3 cut(s)	574, 782, 809
BfaI	CTAG	3 cut(s)	20, 566, 1133
BfoI	RGCGCY	3 cut(s)	858, 888, 1521
BfuAI	ACCTGC	1 cut(s)	596
BisI	GCNGC	8 cut(s)	118, 281, 529, 553, 794, 1266, 1304, 1322
BlsI	GCNGC	8 cut(s)	119, 282, 530, 554, 795, 1267, 1305, 1323
Bme1390I	CCNGG	6 cut(s)	403, 404, 515, 607, 1231, 1366
Bme18I	GGWCC	2 cut(s)	561, 1495
BmeT110I	CYCGRG	2 cut(s)	402, 1256
BmgBI	CACGTC	1 cut(s)	661
BmgT120I	GGNCC	9 cut(s)	375, 376, 405, 517, 561, 1362, 1413, 1495, 1512
BmiI	GGNNCC	6 cut(s)	377, 378, 563, 856, 886, 1363
BmrFI	CCNGG	6 cut(s)	403, 404, 515, 607, 1231, 1366
BmsI	GCATC	3 cut(s)	441, 805, 1242
BoxI	GACNNNNGTC	1 cut(s)	566
BpiI	GAAGAC	1 cut(s)	219
BplI	GAGNNNNNCTC	2 cut(s)	452, 484
BpmI	CTGGAG	4 cut(s)	106, 497, 782, 852
Bpu14I	TTCGAA	2 cut(s)	354, 597
BpuEI	CTTGAG	1 cut(s)	1204
BpuMI	CCSGG	3 cut(s)	403, 404, 1366
BsaHI	GRCGYC	3 cut(s)	791, 855, 885
BsaJI	CCNNGG	6 cut(s)	402, 576, 641, 1005, 1097, 1165
BsaWI	WCCGGW	1 cut(s)	558
BsaXI	ACNNNNNCTCC	4 cut(s)	259, 286, 289, 316
Bsc4I	CCNNNNNNNGG	9 cut(s)	15, 372, 373, 571, 1320, 1341, 1422, 1504, 1521
Bse118I	RCCGGY	2 cut(s)	1268, 1501
Bse1I	ACTGG	1 cut(s)	810
Bse3DI	GCAATG	1 cut(s)	408
BseBI	CCWGG	3 cut(s)	515, 607, 1231
BseDI	CCNNGG	6 cut(s)	402, 576, 641, 1005, 1097, 1165
BseGI	GGATG	4 cut(s)	86, 211, 456, 991
BseLI	CCNNNNNNNGG	9 cut(s)	15, 372, 373, 571, 1320, 1341, 1422, 1504, 1521
BseMI	GCAATG	1 cut(s)	408
BseNI	ACTGG	1 cut(s)	810
BsePI	GCGCGC	1 cut(s)	905
BseRI	GAGGAG	4 cut(s)	211, 335, 352, 377
BseSI	GKGCMC	1 cut(s)	379
BseX3I	CGGCCG	2 cut(s)	1266, 1270
BseXI	GCAGC	2 cut(s)	129, 539
BsgI	GTGCAG	1 cut(s)	724
Bsh1236I	CGCG	4 cut(s)	905, 907, 962, 1326
Bsh1285I	CGRYCG	3 cut(s)	550, 1269, 1273
BshNI	GGYRCC	2 cut(s)	854, 884
BsiEI	CGRYCG	3 cut(s)	550, 1269, 1273
BsiHKAI	GWGCWC	1 cut(s)	465
BsiHKCI	CYCGRG	2 cut(s)	402, 1256
BsiSI	CCGG	9 cut(s)	403, 543, 559, 951, 1269, 1307, 1365, 1473, 1502
BsiWI	CGTACG	1 cut(s)	1408
BslFI	GGGAC	1 cut(s)	1007
BslI	CCNNNNNNNGG	9 cut(s)	15, 372, 373, 571, 1320, 1341, 1422, 1504, 1521
BsmAI	GTCTC	3 cut(s)	574, 782, 809
BsmBI	CGTCTC	2 cut(s)	782, 809
BsmFI	GGGAC	1 cut(s)	1007
BsmI	GAATGC	3 cut(s)	191, 946, 1184
BsoBI	CYCGRG	2 cut(s)	402, 1256
Bsp119I	TTCGAA	2 cut(s)	354, 597
Bsp120I	GGGCCC	1 cut(s)	375
Bsp1286I	GDGCHC	2 cut(s)	379, 465
Bsp143I	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
BspFNI	CGCG	4 cut(s)	905, 907, 962, 1326
BspLI	GGNNCC	6 cut(s)	377, 378, 563, 856, 886, 1363
BspMI	ACCTGC	1 cut(s)	596
BspPI	GGATC	4 cut(s)	120, 934, 1033, 1109
BspT104I	TTCGAA	2 cut(s)	354, 597
BspT107I	GGYRCC	2 cut(s)	854, 884
BsrBI	CCGCTC	3 cut(s)	283, 1261, 1321
BsrDI	GCAATG	1 cut(s)	408
BsrFI	RCCGGY	2 cut(s)	1268, 1501
BsrI	ACTGG	1 cut(s)	810
BssAI	RCCGGY	2 cut(s)	1268, 1501
BssECI	CCNNGG	6 cut(s)	402, 576, 641, 1005, 1097, 1165
BssHII	GCGCGC	1 cut(s)	905
BssMI	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
BssNI	GRCGYC	3 cut(s)	791, 855, 885
BssSI	CACGAG	1 cut(s)	1336
BssT1I	CCWWGG	2 cut(s)	1005, 1165
Bst2BI	CACGAG	1 cut(s)	1336
Bst2UI	CCWGG	3 cut(s)	515, 607, 1231
Bst4CI	ACNGT	4 cut(s)	674, 698, 1019, 1111
Bst6I	CTCTTC	3 cut(s)	33, 229, 527
BstACI	GRCGYC	3 cut(s)	791, 855, 885
BstBI	TTCGAA	2 cut(s)	354, 597
BstC8I	GCNNGC	7 cut(s)	743, 847, 907, 920, 1263, 1270, 1516
BstDEI	CTNAG	2 cut(s)	234, 391
BstDSI	CCRYGG	1 cut(s)	641
BstENI	CCTNNNNNAGG	1 cut(s)	13
BstF5I	GGATG	4 cut(s)	86, 211, 456, 991
BstFNI	CGCG	4 cut(s)	905, 907, 962, 1326
BstH2I	RGCGCY	3 cut(s)	858, 888, 1521
BstHHI	GCGC	8 cut(s)	428, 857, 887, 907, 909, 1303, 1326, 1520
BstKTI	GATC	6 cut(s)	73, 128, 490, 942, 1028, 1104
BstMAI	GTCTC	3 cut(s)	574, 782, 809
BstMBI	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
BstMCI	CGRYCG	3 cut(s)	550, 1269, 1273
BstMWI	GCNNNNNNNGC	8 cut(s)	280, 460, 552, 757, 799, 846, 915, 1274
BstNI	CCWGG	3 cut(s)	515, 607, 1231
BstPAI	GACNNNNGTC	1 cut(s)	566
BstSCI	CCNGG	6 cut(s)	401, 402, 513, 605, 1229, 1364
BstSLI	GKGCMC	1 cut(s)	379
BstUI	CGCG	4 cut(s)	905, 907, 962, 1326
BstV1I	GCAGC	2 cut(s)	129, 539
BstV2I	GAAGAC	1 cut(s)	219
BstX2I	RGATCY	1 cut(s)	125
BstXI	CCANNNNNNTGG	1 cut(s)	613
BstYI	RGATCY	1 cut(s)	125
BstZI	CGGCCG	2 cut(s)	1266, 1270
BtgI	CCRYGG	1 cut(s)	641
BtgZI	GCGATG	1 cut(s)	1416
BtrI	CACGTC	1 cut(s)	661
BtsCI	GGATG	4 cut(s)	86, 211, 456, 991
BtsI	GCAGTG	2 cut(s)	752, 1460
BtsIMutI	CAGTG	2 cut(s)	752, 1460
BveI	ACCTGC	1 cut(s)	596
Cac8I	GCNNGC	7 cut(s)	743, 847, 907, 920, 1263, 1270, 1516
CfoI	GCGC	8 cut(s)	428, 857, 887, 907, 909, 1303, 1326, 1520
Cfr10I	RCCGGY	2 cut(s)	1268, 1501
Cfr13I	GGNCC	9 cut(s)	375, 376, 405, 517, 561, 1362, 1413, 1495, 1512
Cfr9I	CCCGGG	1 cut(s)	402
CseI	GACGC	3 cut(s)	791, 799, 1459
Csp6I	GTAC	2 cut(s)	1409, 1429
CviAII	CATG	4 cut(s)	202, 445, 532, 1358
CviQI	GTAC	2 cut(s)	1409, 1429
DdeI	CTNAG	2 cut(s)	234, 391
DinI	GGCGCC	2 cut(s)	856, 886
DpnI	GATC	6 cut(s)	72, 127, 489, 941, 1027, 1103
DpnII	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
DraIII	CACNNNGTG	1 cut(s)	747
EaeI	YGGCCR	6 cut(s)	749, 1008, 1044, 1266, 1270, 1332
EagI	CGGCCG	2 cut(s)	1266, 1270
Eam1104I	CTCTTC	3 cut(s)	33, 229, 527
EarI	CTCTTC	3 cut(s)	33, 229, 527
EciI	GGCGGA	1 cut(s)	267
Ecl136II	GAGCTC	1 cut(s)	463
EclXI	CGGCCG	2 cut(s)	1266, 1270
Eco130I	CCWWGG	2 cut(s)	1005, 1165
Eco147I	AGGCCT	2 cut(s)	1004, 1528
Eco24I	GRGCYC	2 cut(s)	379, 465
Eco32I	GATATC	1 cut(s)	1074
Eco47I	GGWCC	2 cut(s)	561, 1495
Eco47III	AGCGCT	1 cut(s)	1519
Eco52I	CGGCCG	2 cut(s)	1266, 1270
Eco53kI	GAGCTC	1 cut(s)	463
Eco57I	CTGAAG	1 cut(s)	508
Eco88I	CYCGRG	2 cut(s)	402, 1256
EcoICRI	GAGCTC	1 cut(s)	463
EcoNI	CCTNNNNNAGG	1 cut(s)	13
EcoO109I	RGGNCCY	2 cut(s)	376, 517
EcoRI	GAATTC	1 cut(s)	356
EcoRII	CCWGG	3 cut(s)	513, 605, 1229
EcoRV	GATATC	1 cut(s)	1074
EcoT14I	CCWWGG	2 cut(s)	1005, 1165
EcoT22I	ATGCAT	1 cut(s)	1359
EcoT38I	GRGCYC	2 cut(s)	379, 465
EgeI	GGCGCC	2 cut(s)	856, 886
EheI	GGCGCC	2 cut(s)	856, 886
ErhI	CCWWGG	2 cut(s)	1005, 1165
Esp3I	CGTCTC	2 cut(s)	782, 809
FaeI	CATG	4 cut(s)	205, 448, 535, 1361
FaiI	YATR	8 cut(s)	203, 446, 533, 683, 716, 815, 1355, 1359
FaqI	GGGAC	1 cut(s)	1007
FatI	CATG	4 cut(s)	201, 444, 531, 1357
FauI	CCCGC	3 cut(s)	279, 340, 1254
FbaI	TGATCA	1 cut(s)	70
FblI	GTMKAC	1 cut(s)	720
Fnu4HI	GCNGC	8 cut(s)	118, 281, 529, 553, 794, 1266, 1304, 1322
FokI	GGATG	4 cut(s)	73, 218, 463, 998
FriOI	GRGCYC	2 cut(s)	379, 465
FseI	GGCCGGCC	1 cut(s)	1272
Fsp4HI	GCNGC	8 cut(s)	118, 281, 529, 553, 794, 1266, 1304, 1322
FspBI	CTAG	3 cut(s)	20, 566, 1133
GlaI	GCGC	8 cut(s)	427, 856, 886, 906, 908, 1302, 1325, 1519
GluI	GCNGC	8 cut(s)	118, 281, 529, 553, 794, 1266, 1304, 1322
GsuI	CTGGAG	4 cut(s)	106, 497, 782, 852
HaeII	RGCGCY	3 cut(s)	858, 888, 1521
HapII	CCGG	9 cut(s)	403, 543, 559, 951, 1269, 1307, 1365, 1473, 1502
HgaI	GACGC	3 cut(s)	791, 799, 1459
HhaI	GCGC	8 cut(s)	428, 857, 887, 907, 909, 1303, 1326, 1520
Hin1I	GRCGYC	3 cut(s)	791, 855, 885
Hin1II	CATG	4 cut(s)	205, 448, 535, 1361
Hin6I	GCGC	8 cut(s)	426, 855, 885, 905, 907, 1301, 1324, 1518
HinP1I	GCGC	8 cut(s)	426, 855, 885, 905, 907, 1301, 1324, 1518
HincII	GTYRAC	3 cut(s)	721, 1147, 1285
HindII	GTYRAC	3 cut(s)	721, 1147, 1285
HindIII	AAGCTT	1 cut(s)	707
HinfI	GANTC	7 cut(s)	539, 599, 637, 754, 1310, 1328, 1463
HpaII	CCGG	9 cut(s)	403, 543, 559, 951, 1269, 1307, 1365, 1473, 1502
HphI	GGTGA	7 cut(s)	128, 277, 490, 646, 710, 799, 1472
Hpy166II	GTNNAC	5 cut(s)	645, 721, 1147, 1201, 1285
Hpy188I	TCNGA	3 cut(s)	70, 580, 1086
Hpy188III	TCNNGA	5 cut(s)	123, 619, 629, 1175, 1214
Hpy8I	GTNNAC	5 cut(s)	645, 721, 1147, 1201, 1285
Hpy99I	CGWCG	5 cut(s)	179, 298, 665, 1319, 1472
HpyAV	CCTTC	5 cut(s)	139, 334, 868, 1430, 1486
HpyCH4III	ACNGT	4 cut(s)	674, 698, 1019, 1111
HpyCH4IV	ACGT	4 cut(s)	177, 660, 1137, 1407
HpyCH4V	TGCA	3 cut(s)	677, 741, 1357
HpyF10VI	GCNNNNNNNGC	8 cut(s)	280, 460, 552, 757, 799, 846, 915, 1274
HpyF3I	CTNAG	2 cut(s)	234, 391
HpySE526I	ACGT	4 cut(s)	177, 660, 1137, 1407
Hsp92I	GRCGYC	3 cut(s)	791, 855, 885
Hsp92II	CATG	4 cut(s)	205, 448, 535, 1361
HspAI	GCGC	8 cut(s)	426, 855, 885, 905, 907, 1301, 1324, 1518
KasI	GGCGCC	2 cut(s)	854, 884
KroI	GCCGGC	1 cut(s)	1268
KroNI	GCCGGC	1 cut(s)	1270
Ksp22I	TGATCA	1 cut(s)	70
Kzo9I	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
LmnI	GCTCC	3 cut(s)	125, 964, 1086
Lsp1109I	GCAGC	2 cut(s)	129, 539
LweI	GCATC	3 cut(s)	441, 805, 1242
MaeI	CTAG	3 cut(s)	20, 566, 1133
MaeII	ACGT	4 cut(s)	177, 660, 1137, 1407
MaeIII	GTNAC	6 cut(s)	22, 656, 668, 1029, 1238, 1460
MalI	GATC	6 cut(s)	72, 127, 489, 941, 1027, 1103
MbiI	CCGCTC	3 cut(s)	283, 1261, 1321
MboI	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
MboII	GAAGA	9 cut(s)	20, 194, 216, 219, 221, 222, 224, 514, 1133
MflI	RGATCY	1 cut(s)	125
MhlI	GDGCHC	2 cut(s)	379, 465
MlsI	TGGCCA	1 cut(s)	1010
MluCI	AATT	7 cut(s)	82, 356, 623, 678, 879, 899, 929
MluNI	TGGCCA	1 cut(s)	1010
Mly113I	GGCGCC	2 cut(s)	855, 885
MlyI	GAGTC	6 cut(s)	533, 646, 748, 1304, 1337, 1457
MmeI	TCCRAC	4 cut(s)	1003, 1030, 1120, 1400
Mox20I	TGGCCA	1 cut(s)	1010
Mph1103I	ATGCAT	1 cut(s)	1359
MroNI	GCCGGC	1 cut(s)	1268
MscI	TGGCCA	1 cut(s)	1010
MseI	TTAA	2 cut(s)	911, 1091
MslI	CAYNNNNRTG	1 cut(s)	449
Msp20I	TGGCCA	1 cut(s)	1010
MspA1I	CMGCKG	1 cut(s)	552
MspI	CCGG	9 cut(s)	403, 543, 559, 951, 1269, 1307, 1365, 1473, 1502
MspR9I	CCNGG	6 cut(s)	403, 404, 515, 607, 1231, 1366
Mva1269I	GAATGC	3 cut(s)	191, 946, 1184
MvaI	CCWGG	3 cut(s)	515, 607, 1231
MvnI	CGCG	4 cut(s)	905, 907, 962, 1326
MwoI	GCNNNNNNNGC	8 cut(s)	280, 460, 552, 757, 799, 846, 915, 1274
NaeI	GCCGGC	1 cut(s)	1270
NarI	GGCGCC	2 cut(s)	855, 885
NciI	CCSGG	3 cut(s)	403, 404, 1366
NdeII	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
NgoMIV	GCCGGC	1 cut(s)	1268
NlaIII	CATG	4 cut(s)	205, 448, 535, 1361
NlaIV	GGNNCC	6 cut(s)	377, 378, 563, 856, 886, 1363
NmeAIII	GCCGAG	4 cut(s)	444, 551, 1122, 1298
NmuCI	GTSAC	3 cut(s)	22, 656, 1460
NsiI	ATGCAT	1 cut(s)	1359
NspV	TTCGAA	2 cut(s)	354, 597
PaeR7I	CTCGAG	1 cut(s)	1256
PauI	GCGCGC	1 cut(s)	905
PceI	AGGCCT	2 cut(s)	1004, 1528
PcsI	WCGNNNNNNNCGW	4 cut(s)	483, 749, 1323, 1343
PctI	GAATGC	3 cut(s)	191, 946, 1184
PdiI	GCCGGC	1 cut(s)	1270
PfeI	GAWTC	1 cut(s)	599
Pfl23II	CGTACG	1 cut(s)	1408
PflFI	GACNNNGTC	3 cut(s)	1160, 1313, 1466
PflMI	CCANNNNNTGG	3 cut(s)	1341, 1504, 1521
PkrI	GCNGC	8 cut(s)	119, 282, 530, 554, 795, 1267, 1305, 1323
PleI	GAGTC	6 cut(s)	533, 645, 748, 1304, 1336, 1457
PluTI	GGCGCC	2 cut(s)	858, 888
PpsI	GAGTC	6 cut(s)	533, 645, 748, 1304, 1336, 1457
PshAI	GACNNNNGTC	1 cut(s)	566
Psp124BI	GAGCTC	1 cut(s)	465
Psp6I	CCWGG	3 cut(s)	513, 605, 1229
PspGI	CCWGG	3 cut(s)	513, 605, 1229
PspLI	CGTACG	1 cut(s)	1408
PspN4I	GGNNCC	6 cut(s)	377, 378, 563, 856, 886, 1363
PspOMI	GGGCCC	1 cut(s)	375
PspPI	GGNCC	9 cut(s)	375, 376, 405, 517, 561, 1362, 1413, 1495, 1512
PspXI	VCTCGAGB	1 cut(s)	1256
PsuI	RGATCY	1 cut(s)	125
PsyI	GACNNNGTC	3 cut(s)	1160, 1313, 1466
PteI	GCGCGC	1 cut(s)	905
RigI	GGCCGGCC	1 cut(s)	1272
RsaI	GTAC	2 cut(s)	1410, 1430
RsaNI	GTAC	2 cut(s)	1409, 1429
RseI	CAYNNNNRTG	1 cut(s)	449
SacI	GAGCTC	1 cut(s)	465
SalI	GTCGAC	1 cut(s)	719
SaqAI	TTAA	2 cut(s)	911, 1091
SatI	GCNGC	8 cut(s)	118, 281, 529, 553, 794, 1266, 1304, 1322
Sau3AI	GATC	6 cut(s)	70, 125, 487, 939, 1025, 1101
Sau96I	GGNCC	9 cut(s)	375, 376, 405, 517, 561, 1362, 1413, 1495, 1512
SchI	GAGTC	6 cut(s)	533, 646, 748, 1304, 1337, 1457
ScrFI	CCNGG	6 cut(s)	403, 404, 515, 607, 1231, 1366
SduI	GDGCHC	2 cut(s)	379, 465
SfaNI	GCATC	3 cut(s)	441, 805, 1242
SfoI	GGCGCC	2 cut(s)	856, 886
Sfr274I	CTCGAG	1 cut(s)	1256
SfuI	TTCGAA	2 cut(s)	354, 597
SinI	GGWCC	2 cut(s)	561, 1495
SlaI	CTCGAG	1 cut(s)	1256
SmaI	CCCGGG	1 cut(s)	404
SmiMI	CAYNNNNRTG	1 cut(s)	449
SmlI	CTYRAG	2 cut(s)	1183, 1256
SmoI	CTYRAG	2 cut(s)	1183, 1256
SrfI	GCCCGGGC	1 cut(s)	404
Sse9I	AATT	7 cut(s)	82, 356, 623, 678, 879, 899, 929
SseBI	AGGCCT	2 cut(s)	1004, 1528
SspDI	GGCGCC	2 cut(s)	854, 884
SspI	AATATT	1 cut(s)	1479
SspMI	CTAG	3 cut(s)	20, 566, 1133
SstI	GAGCTC	1 cut(s)	465
StuI	AGGCCT	2 cut(s)	1004, 1528
StyD4I	CCNGG	6 cut(s)	401, 402, 513, 605, 1229, 1364
StyI	CCWWGG	2 cut(s)	1005, 1165
TaaI	ACNGT	4 cut(s)	674, 698, 1019, 1111
TaiI	ACGT	4 cut(s)	180, 663, 1140, 1410
TaqI	TCGA	6 cut(s)	354, 597, 720, 1257, 1317, 1346
TaqII	GACCGA	2 cut(s)	551, 644
TasI	AATT	7 cut(s)	82, 356, 623, 678, 879, 899, 929
TauI	GCSGC	6 cut(s)	283, 531, 796, 1268, 1306, 1324
TfiI	GAWTC	1 cut(s)	599
Tru1I	TTAA	2 cut(s)	911, 1091
Tru9I	TTAA	2 cut(s)	911, 1091
TscAI	CASTG	2 cut(s)	752, 1460
TseFI	GTSAC	3 cut(s)	22, 656, 1460
TseI	GCWGC	2 cut(s)	117, 552
Tsp45I	GTSAC	3 cut(s)	22, 656, 1460
TspDTI	ATGAA	5 cut(s)	75, 190, 222, 887, 1371
TspGWI	ACGGA	3 cut(s)	630, 1303, 1456
TspMI	CCCGGG	1 cut(s)	402
TspRI	CASTG	2 cut(s)	752, 1460
Tth111I	GACNNNGTC	3 cut(s)	1160, 1313, 1466
Van91I	CCANNNNNTGG	3 cut(s)	1341, 1504, 1521
VpaK11BI	GGWCC	2 cut(s)	561, 1495
XagI	CCTNNNNNAGG	1 cut(s)	13
XapI	RAATTY	4 cut(s)	356, 623, 899, 929
XcmI	CCANNNNNNNNNTGG	2 cut(s)	610, 1285
XhoI	CTCGAG	1 cut(s)	1256
XmaI	CCCGGG	1 cut(s)	402
XmiI	GTMKAC	1 cut(s)	720
XspI	CTAG	3 cut(s)	20, 566, 1133
Zsp2I	ATGCAT	1 cut(s)	1359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.