Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0014436

Physical Location & Seq

Genomic Coordinates Forward (+)

18402390 .. 18404398

Gene Structure 2009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G015780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGATACCTTGTTTAGGCTAGTCACTCTTCAACAACAACAACAGCAACAACAATCTGATCAATCTTTCAATTCATCCACCAGAACCACCACCACCACTTCCAGCAGCTCCAGATCCTTCACTCACCACCCACAACACCACCAACACTACCCCCAACAAAACGACGTTGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTCTCCTCTTCTTCTTCTAAGGCTCACTACTATCCCACCCCACCAACCCCTACCCCGCCTCCGCCGCTCACCACCACGACGACCACTCCCGCCTCCGCCGATTTCTCCTTCTCCCCCGCCCACGACCTCCTCAACTTCGAATTCTCGTCCCCCAAGTGGGCCCCTGACCTCCTCTTAGAAACCGCCCGGGCCATTGCTGACAAGAACAGCGCAAGAGTTCAACAGCTCATGTGGATGCTCAACGAGCTCGGCTCTCCCTACGGCGACACAGATCAAAAACTCACCTCCTACTTCCTCCAGGCCCTCTTCAGCCGCATGACCGACTCCGGCGACCGCTGCTACCGGACCCTAGTCTCGGCCTCTGAGAAAACCTGCTCTTTCGAATCCACCAGGAAAATGGTCTTGAAATTTCAGGAGGTGAGTCCGTGGACTACATTCGGTCACGTCGCTTGTAACGGTGCAATTATGGAAGCCTTTGATGGTGAGGCCAAGCTTCACATAGTTGACATCAGCAACACTTACTGCACGCAGTGGCCGACTCTGCTGGAGGCTCTTGCCACCCGAACTGATGAGACGCCACATCTGCGTCTCACCAGTATAGTCGTCAGCAGAGCTGGAGATGGCTCTGCTGGCGTTGGCGCCACGCAAAAAGTAATGAAGGAAATCGGCGCCAGAATGGAGAAATTCGCGCGCTTAATGGGCGTGCCGTTCAAATTCAATGCGATCCAGCATTCCGGCGACCTCGCGGAGCTGAACTTGGCTGATTTGGATGTCAGGGACGATGAGGCCTTGGCCATCAACTGTGTTGGATCGTTACATTCAATCGTGGCCGTTGGAAACCGCCGTGATTATTTGATATCGGCTTTTCGGAGCTTAAAGCCGAGGATCATTACTGTTGTGGAGGAAGAAGCTGACCTAGACGTTGGAGTTGACGGGTTTGACTTCGTCCAAGGGTTTCAGGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCTCTGGACGAGAGCTTCGCCCGGACGAGTAACGAGAGGTTGATGCTCGAGCGGGCGGCCGGCCGAGCCATCGTTGACTTGGTGGCTTGTGCGCCGCCGGACTCCGTCGAGCGGCGCGAGTCGGCCACGCGCTGGTCGAGGCGTATGCATGGGGCCGGGTTCAGTCCAACTTCATTTAGTGATGAGGTGTGCGATGACGTACGGGCCTTGTTGCGGAGGTACAAGGAAGGTTGGTCAATGACGCAGTGTGGTGACTCCGTCGCCGGAATATTCTTGTCGTGGAAGGACCAGCCAGTGGTTTGGGCCAGCGCTTGGAGGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007346 GO:0007389 GO:0008150 GO:0008356 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045786 GO:0045930 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051171 GO:0051252 GO:0051301 GO:0051726 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0060255 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

506

Amino Acids

56.82

Weight (kDa)

5.32

Isoelectric Point (pI)

48.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	124 - 505	1.4e-103	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37650
fragaria_vesca	FvH4_1g17690
malus_domestica	MD02G1185900.v1.1 MD15G1307800.v1.1
prunus_persica	Prupe.6G220800_v2.0.a1
pyrus_communis	pycom02g15090 pycom15g26030
rosa_chinensis	RchiOBHm_Chr2g0108031
rosa_laevigata	RLG00000017634
rosa_multiflora	Rmu_sc0001484.1_g000021
rosa_roxburghii	Rroxscaffold_2G00135710
rosa_rugosa	Rorug02G0149800
rosa_samantha	Rh2AG198800 Rh2BG211700 Rh2CG203400 Rh2DG206400
rosa_wichuraiana	Rw2G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	584
AccB1I	GGYRCC	2 cut(s)	842, 872
AccB7I	CCANNNNNTGG	3 cut(s)	1329, 1492, 1509
AccBSI	CCGCTC	3 cut(s)	271, 1249, 1309
AccII	CGCG	5 cut(s)	893, 895, 950, 1314, 1327
AclWI	GGATC	4 cut(s)	108, 922, 1021, 1097
AcoI	YGGCCR	6 cut(s)	737, 996, 1032, 1254, 1258, 1320
AcsI	RAATTY	4 cut(s)	344, 611, 887, 917
AcuI	CTGAAG	1 cut(s)	496
AcyI	GRCGYC	3 cut(s)	779, 843, 873
AdeI	CACNNNGTG	1 cut(s)	735
AfaI	GTAC	2 cut(s)	1398, 1418
AfeI	AGCGCT	1 cut(s)	1507
AfiI	CCNNNNNNNGG	9 cut(s)	15, 360, 361, 559, 1308, 1329, 1410, 1492, 1509
AgsI	TTSAA	9 cut(s)	32, 70, 170, 181, 425, 610, 916, 922, 1026
AjiI	CACGTC	1 cut(s)	649
AjnI	CCWGG	2 cut(s)	501, 593
AluBI	AGCT	9 cut(s)	108, 430, 451, 697, 818, 955, 1077, 1115, 1212
AluI	AGCT	9 cut(s)	108, 430, 451, 697, 818, 955, 1077, 1115, 1212
Alw21I	GWGCWC	1 cut(s)	453
Alw26I	GTCTC	3 cut(s)	562, 770, 797
AlwI	GGATC	4 cut(s)	108, 922, 1021, 1097
Ama87I	CYCGRG	2 cut(s)	390, 1244
Aor51HI	AGCGCT	1 cut(s)	1507
ApaI	GGGCCC	1 cut(s)	367
ApeKI	GCWGC	2 cut(s)	105, 540
ApoI	RAATTY	4 cut(s)	344, 611, 887, 917
ArsI	GACNNNNNNTTYG	2 cut(s)	1196, 1228
AspLEI	GCGC	9 cut(s)	416, 845, 875, 895, 897, 1291, 1314, 1329, 1508
AspS9I	GGNCC	9 cut(s)	363, 364, 393, 505, 549, 1350, 1401, 1483, 1500
AsuC2I	CCSGG	4 cut(s)	391, 392, 1219, 1354
AsuHPI	GGTGA	7 cut(s)	116, 265, 478, 634, 698, 787, 1460
AsuII	TTCGAA	2 cut(s)	342, 585
AvaI	CYCGRG	2 cut(s)	390, 1244
AvaII	GGWCC	2 cut(s)	549, 1483
BaeGI	GKGCMC	1 cut(s)	367
BalI	TGGCCA	1 cut(s)	998
BanI	GGYRCC	2 cut(s)	842, 872
BanII	GRGCYC	2 cut(s)	367, 453
BbsI	GAAGAC	1 cut(s)	207
Bbv12I	GWGCWC	1 cut(s)	453
BbvI	GCAGC	2 cut(s)	117, 527
BccI	CCATC	4 cut(s)	677, 818, 1007, 1274
BceAI	ACGGC	4 cut(s)	481, 895, 1019, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	1324, 1358
BciT130I	CCWGG	2 cut(s)	503, 595
BclI	TGATCA	1 cut(s)	58
BcnI	CCSGG	4 cut(s)	391, 392, 1219, 1354
BcoDI	GTCTC	3 cut(s)	562, 770, 797
BfaI	CTAG	3 cut(s)	20, 554, 1121
BfoI	RGCGCY	3 cut(s)	846, 876, 1509
BfuAI	ACCTGC	1 cut(s)	584
BisI	GCNGC	7 cut(s)	106, 269, 517, 541, 1254, 1292, 1310
BlsI	GCNGC	7 cut(s)	107, 270, 518, 542, 1255, 1293, 1311
Bme1390I	CCNGG	6 cut(s)	391, 392, 503, 595, 1219, 1354
Bme18I	GGWCC	2 cut(s)	549, 1483
BmeT110I	CYCGRG	2 cut(s)	390, 1244
BmgBI	CACGTC	1 cut(s)	649
BmgT120I	GGNCC	9 cut(s)	363, 364, 393, 505, 549, 1350, 1401, 1483, 1500
BmiI	GGNNCC	6 cut(s)	365, 366, 551, 844, 874, 1351
BmrFI	CCNGG	6 cut(s)	391, 392, 503, 595, 1219, 1354
BmsI	GCATC	2 cut(s)	429, 1230
BoxI	GACNNNNGTC	1 cut(s)	554
BpiI	GAAGAC	1 cut(s)	207
BplI	GAGNNNNNCTC	2 cut(s)	440, 472
BpmI	CTGGAG	4 cut(s)	94, 485, 770, 840
Bpu14I	TTCGAA	2 cut(s)	342, 585
BpuEI	CTTGAG	1 cut(s)	1192
BpuMI	CCSGG	4 cut(s)	391, 392, 1219, 1354
BsaHI	GRCGYC	3 cut(s)	779, 843, 873
BsaJI	CCNNGG	5 cut(s)	390, 629, 993, 1085, 1153
BsaWI	WCCGGW	1 cut(s)	546
BsaXI	ACNNNNNCTCC	4 cut(s)	247, 274, 277, 304
Bsc4I	CCNNNNNNNGG	9 cut(s)	15, 360, 361, 559, 1308, 1329, 1410, 1492, 1509
Bse118I	RCCGGY	1 cut(s)	1256
Bse1I	ACTGG	2 cut(s)	798, 1490
Bse3DI	GCAATG	1 cut(s)	396
BseBI	CCWGG	2 cut(s)	503, 595
BseDI	CCNNGG	5 cut(s)	390, 629, 993, 1085, 1153
BseGI	GGATG	4 cut(s)	74, 199, 444, 979
BseLI	CCNNNNNNNGG	9 cut(s)	15, 360, 361, 559, 1308, 1329, 1410, 1492, 1509
BseMI	GCAATG	1 cut(s)	396
BseMII	CTCAG	1 cut(s)	558
BseNI	ACTGG	2 cut(s)	798, 1490
BsePI	GCGCGC	1 cut(s)	893
BseRI	GAGGAG	3 cut(s)	199, 323, 365
BseSI	GKGCMC	1 cut(s)	367
BseX3I	CGGCCG	2 cut(s)	1254, 1258
BseXI	GCAGC	2 cut(s)	117, 527
BsgI	GTGCAG	1 cut(s)	712
Bsh1236I	CGCG	5 cut(s)	893, 895, 950, 1314, 1327
Bsh1285I	CGRYCG	3 cut(s)	538, 1257, 1261
BshNI	GGYRCC	2 cut(s)	842, 872
BsiEI	CGRYCG	3 cut(s)	538, 1257, 1261
BsiHKAI	GWGCWC	1 cut(s)	453
BsiHKCI	CYCGRG	2 cut(s)	390, 1244
BsiSI	CCGG	9 cut(s)	391, 531, 547, 939, 1219, 1257, 1295, 1353, 1461
BsiWI	CGTACG	1 cut(s)	1396
BslFI	GGGAC	2 cut(s)	337, 995
BslI	CCNNNNNNNGG	9 cut(s)	15, 360, 361, 559, 1308, 1329, 1410, 1492, 1509
BsmAI	GTCTC	3 cut(s)	562, 770, 797
BsmBI	CGTCTC	2 cut(s)	770, 797
BsmFI	GGGAC	2 cut(s)	337, 995
BsmI	GAATGC	3 cut(s)	179, 934, 1172
BsoBI	CYCGRG	2 cut(s)	390, 1244
Bsp119I	TTCGAA	2 cut(s)	342, 585
Bsp120I	GGGCCC	1 cut(s)	363
Bsp1286I	GDGCHC	2 cut(s)	367, 453
Bsp143I	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
BspCNI	CTCAG	1 cut(s)	559
BspFNI	CGCG	5 cut(s)	893, 895, 950, 1314, 1327
BspLI	GGNNCC	6 cut(s)	365, 366, 551, 844, 874, 1351
BspMI	ACCTGC	1 cut(s)	584
BspPI	GGATC	4 cut(s)	108, 922, 1021, 1097
BspT104I	TTCGAA	2 cut(s)	342, 585
BspT107I	GGYRCC	2 cut(s)	842, 872
BsrBI	CCGCTC	3 cut(s)	271, 1249, 1309
BsrDI	GCAATG	1 cut(s)	396
BsrFI	RCCGGY	1 cut(s)	1256
BsrI	ACTGG	2 cut(s)	798, 1490
BssAI	RCCGGY	1 cut(s)	1256
BssECI	CCNNGG	5 cut(s)	390, 629, 993, 1085, 1153
BssHII	GCGCGC	1 cut(s)	893
BssMI	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
BssNI	GRCGYC	3 cut(s)	779, 843, 873
BssT1I	CCWWGG	2 cut(s)	993, 1153
Bst2UI	CCWGG	2 cut(s)	503, 595
Bst4CI	ACNGT	3 cut(s)	662, 1007, 1099
Bst6I	CTCTTC	3 cut(s)	33, 217, 515
BstACI	GRCGYC	3 cut(s)	779, 843, 873
BstBI	TTCGAA	2 cut(s)	342, 585
BstC8I	GCNNGC	7 cut(s)	731, 835, 895, 908, 1251, 1258, 1504
BstDEI	CTNAG	3 cut(s)	222, 379, 567
BstDSI	CCRYGG	1 cut(s)	629
BstENI	CCTNNNNNAGG	1 cut(s)	13
BstF5I	GGATG	4 cut(s)	74, 199, 444, 979
BstFNI	CGCG	5 cut(s)	893, 895, 950, 1314, 1327
BstH2I	RGCGCY	3 cut(s)	846, 876, 1509
BstHHI	GCGC	9 cut(s)	416, 845, 875, 895, 897, 1291, 1314, 1329, 1508
BstKTI	GATC	6 cut(s)	61, 116, 478, 930, 1016, 1092
BstMAI	GTCTC	3 cut(s)	562, 770, 797
BstMBI	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
BstMCI	CGRYCG	3 cut(s)	538, 1257, 1261
BstMWI	GCNNNNNNNGC	8 cut(s)	268, 448, 540, 745, 787, 834, 903, 1262
BstNI	CCWGG	2 cut(s)	503, 595
BstPAI	GACNNNNGTC	1 cut(s)	554
BstSCI	CCNGG	6 cut(s)	389, 390, 501, 593, 1217, 1352
BstSLI	GKGCMC	1 cut(s)	367
BstUI	CGCG	5 cut(s)	893, 895, 950, 1314, 1327
BstV1I	GCAGC	2 cut(s)	117, 527
BstV2I	GAAGAC	1 cut(s)	207
BstX2I	RGATCY	1 cut(s)	113
BstXI	CCANNNNNNTGG	2 cut(s)	601, 1497
BstYI	RGATCY	1 cut(s)	113
BstZI	CGGCCG	2 cut(s)	1254, 1258
BtgI	CCRYGG	1 cut(s)	629
BtgZI	GCGATG	1 cut(s)	1404
BtrI	CACGTC	1 cut(s)	649
BtsCI	GGATG	4 cut(s)	74, 199, 444, 979
BtsI	GCAGTG	2 cut(s)	740, 1448
BtsIMutI	CAGTG	3 cut(s)	740, 1448, 1497
BveI	ACCTGC	1 cut(s)	584
Cac8I	GCNNGC	7 cut(s)	731, 835, 895, 908, 1251, 1258, 1504
CfoI	GCGC	9 cut(s)	416, 845, 875, 895, 897, 1291, 1314, 1329, 1508
Cfr10I	RCCGGY	1 cut(s)	1256
Cfr13I	GGNCC	9 cut(s)	363, 364, 393, 505, 549, 1350, 1401, 1483, 1500
Cfr9I	CCCGGG	1 cut(s)	390
CseI	GACGC	3 cut(s)	779, 787, 1447
Csp6I	GTAC	2 cut(s)	1397, 1417
CviAII	CATG	4 cut(s)	190, 433, 520, 1346
CviQI	GTAC	2 cut(s)	1397, 1417
DdeI	CTNAG	3 cut(s)	222, 379, 567
DinI	GGCGCC	2 cut(s)	844, 874
DpnI	GATC	6 cut(s)	60, 115, 477, 929, 1015, 1091
DpnII	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
DraIII	CACNNNGTG	1 cut(s)	735
EaeI	YGGCCR	6 cut(s)	737, 996, 1032, 1254, 1258, 1320
EagI	CGGCCG	2 cut(s)	1254, 1258
Eam1104I	CTCTTC	3 cut(s)	33, 217, 515
EarI	CTCTTC	3 cut(s)	33, 217, 515
EciI	GGCGGA	2 cut(s)	255, 289
Ecl136II	GAGCTC	1 cut(s)	451
EclXI	CGGCCG	2 cut(s)	1254, 1258
Eco130I	CCWWGG	2 cut(s)	993, 1153
Eco147I	AGGCCT	2 cut(s)	992, 1516
Eco24I	GRGCYC	2 cut(s)	367, 453
Eco32I	GATATC	1 cut(s)	1062
Eco47I	GGWCC	2 cut(s)	549, 1483
Eco47III	AGCGCT	1 cut(s)	1507
Eco52I	CGGCCG	2 cut(s)	1254, 1258
Eco53kI	GAGCTC	1 cut(s)	451
Eco57I	CTGAAG	1 cut(s)	496
Eco88I	CYCGRG	2 cut(s)	390, 1244
EcoICRI	GAGCTC	1 cut(s)	451
EcoNI	CCTNNNNNAGG	1 cut(s)	13
EcoO109I	RGGNCCY	2 cut(s)	364, 505
EcoRI	GAATTC	1 cut(s)	344
EcoRII	CCWGG	2 cut(s)	501, 593
EcoRV	GATATC	1 cut(s)	1062
EcoT14I	CCWWGG	2 cut(s)	993, 1153
EcoT22I	ATGCAT	1 cut(s)	1347
EcoT38I	GRGCYC	2 cut(s)	367, 453
EgeI	GGCGCC	2 cut(s)	844, 874
EheI	GGCGCC	2 cut(s)	844, 874
ErhI	CCWWGG	2 cut(s)	993, 1153
Esp3I	CGTCTC	2 cut(s)	770, 797
FaeI	CATG	4 cut(s)	193, 436, 523, 1349
FaiI	YATR	8 cut(s)	191, 434, 521, 671, 704, 803, 1343, 1347
FaqI	GGGAC	2 cut(s)	337, 995
FatI	CATG	4 cut(s)	189, 432, 519, 1345
FauI	CCCGC	4 cut(s)	267, 301, 328, 1242
FbaI	TGATCA	1 cut(s)	58
Fnu4HI	GCNGC	7 cut(s)	106, 269, 517, 541, 1254, 1292, 1310
FokI	GGATG	4 cut(s)	61, 206, 451, 986
FriOI	GRGCYC	2 cut(s)	367, 453
FseI	GGCCGGCC	1 cut(s)	1260
Fsp4HI	GCNGC	7 cut(s)	106, 269, 517, 541, 1254, 1292, 1310
FspBI	CTAG	3 cut(s)	20, 554, 1121
GlaI	GCGC	9 cut(s)	415, 844, 874, 894, 896, 1290, 1313, 1328, 1507
GluI	GCNGC	7 cut(s)	106, 269, 517, 541, 1254, 1292, 1310
GsuI	CTGGAG	4 cut(s)	94, 485, 770, 840
HaeII	RGCGCY	3 cut(s)	846, 876, 1509
HapII	CCGG	9 cut(s)	391, 531, 547, 939, 1219, 1257, 1295, 1353, 1461
HgaI	GACGC	3 cut(s)	779, 787, 1447
HhaI	GCGC	9 cut(s)	416, 845, 875, 895, 897, 1291, 1314, 1329, 1508
Hin1I	GRCGYC	3 cut(s)	779, 843, 873
Hin1II	CATG	4 cut(s)	193, 436, 523, 1349
Hin6I	GCGC	9 cut(s)	414, 843, 873, 893, 895, 1289, 1312, 1327, 1506
HinP1I	GCGC	9 cut(s)	414, 843, 873, 893, 895, 1289, 1312, 1327, 1506
HincII	GTYRAC	3 cut(s)	709, 1135, 1273
HindII	GTYRAC	3 cut(s)	709, 1135, 1273
HindIII	AAGCTT	1 cut(s)	695
HinfI	GANTC	7 cut(s)	527, 587, 625, 742, 1298, 1316, 1451
HpaII	CCGG	9 cut(s)	391, 531, 547, 939, 1219, 1257, 1295, 1353, 1461
HphI	GGTGA	7 cut(s)	116, 265, 478, 634, 698, 787, 1460
Hpy166II	GTNNAC	5 cut(s)	633, 709, 1135, 1189, 1273
Hpy188I	TCNGA	3 cut(s)	58, 568, 1074
Hpy188III	TCNNGA	5 cut(s)	111, 607, 617, 1163, 1202
Hpy8I	GTNNAC	5 cut(s)	633, 709, 1135, 1189, 1273
Hpy99I	CGWCG	5 cut(s)	167, 286, 653, 1307, 1460
HpyAV	CCTTC	5 cut(s)	127, 322, 856, 1418, 1474
HpyCH4III	ACNGT	3 cut(s)	662, 1007, 1099
HpyCH4IV	ACGT	4 cut(s)	165, 648, 1125, 1395
HpyCH4V	TGCA	3 cut(s)	665, 729, 1345
HpyF10VI	GCNNNNNNNGC	8 cut(s)	268, 448, 540, 745, 787, 834, 903, 1262
HpyF3I	CTNAG	3 cut(s)	222, 379, 567
HpySE526I	ACGT	4 cut(s)	165, 648, 1125, 1395
Hsp92I	GRCGYC	3 cut(s)	779, 843, 873
Hsp92II	CATG	4 cut(s)	193, 436, 523, 1349
HspAI	GCGC	9 cut(s)	414, 843, 873, 893, 895, 1289, 1312, 1327, 1506
KasI	GGCGCC	2 cut(s)	842, 872
KroI	GCCGGC	1 cut(s)	1256
KroNI	GCCGGC	1 cut(s)	1258
Ksp22I	TGATCA	1 cut(s)	58
Kzo9I	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
LmnI	GCTCC	3 cut(s)	113, 952, 1074
Lsp1109I	GCAGC	2 cut(s)	117, 527
LweI	GCATC	2 cut(s)	429, 1230
MaeI	CTAG	3 cut(s)	20, 554, 1121
MaeII	ACGT	4 cut(s)	165, 648, 1125, 1395
MaeIII	GTNAC	6 cut(s)	22, 644, 656, 1017, 1226, 1448
MalI	GATC	6 cut(s)	60, 115, 477, 929, 1015, 1091
MbiI	CCGCTC	3 cut(s)	271, 1249, 1309
MboI	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
MboII	GAAGA	9 cut(s)	20, 182, 204, 207, 209, 210, 212, 502, 1121
MflI	RGATCY	1 cut(s)	113
MhlI	GDGCHC	2 cut(s)	367, 453
MlsI	TGGCCA	1 cut(s)	998
MluCI	AATT	6 cut(s)	70, 344, 611, 666, 887, 917
MluNI	TGGCCA	1 cut(s)	998
Mly113I	GGCGCC	2 cut(s)	843, 873
MlyI	GAGTC	6 cut(s)	521, 634, 736, 1292, 1325, 1445
MmeI	TCCRAC	4 cut(s)	991, 1018, 1108, 1388
Mox20I	TGGCCA	1 cut(s)	998
Mph1103I	ATGCAT	1 cut(s)	1347
MroNI	GCCGGC	1 cut(s)	1256
MscI	TGGCCA	1 cut(s)	998
MseI	TTAA	2 cut(s)	899, 1079
MslI	CAYNNNNRTG	1 cut(s)	437
Msp20I	TGGCCA	1 cut(s)	998
MspA1I	CMGCKG	1 cut(s)	540
MspI	CCGG	9 cut(s)	391, 531, 547, 939, 1219, 1257, 1295, 1353, 1461
MspR9I	CCNGG	6 cut(s)	391, 392, 503, 595, 1219, 1354
Mva1269I	GAATGC	3 cut(s)	179, 934, 1172
MvaI	CCWGG	2 cut(s)	503, 595
MvnI	CGCG	5 cut(s)	893, 895, 950, 1314, 1327
MwoI	GCNNNNNNNGC	8 cut(s)	268, 448, 540, 745, 787, 834, 903, 1262
NaeI	GCCGGC	1 cut(s)	1258
NarI	GGCGCC	2 cut(s)	843, 873
NciI	CCSGG	4 cut(s)	391, 392, 1219, 1354
NdeII	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
NgoMIV	GCCGGC	1 cut(s)	1256
NlaIII	CATG	4 cut(s)	193, 436, 523, 1349
NlaIV	GGNNCC	6 cut(s)	365, 366, 551, 844, 874, 1351
NmeAIII	GCCGAG	4 cut(s)	432, 539, 1110, 1286
NmuCI	GTSAC	3 cut(s)	22, 644, 1448
NsiI	ATGCAT	1 cut(s)	1347
NspV	TTCGAA	2 cut(s)	342, 585
PaeR7I	CTCGAG	1 cut(s)	1244
PauI	GCGCGC	1 cut(s)	893
PceI	AGGCCT	2 cut(s)	992, 1516
PcsI	WCGNNNNNNNCGW	3 cut(s)	737, 1311, 1331
PctI	GAATGC	3 cut(s)	179, 934, 1172
PdiI	GCCGGC	1 cut(s)	1258
PfeI	GAWTC	1 cut(s)	587
Pfl23II	CGTACG	1 cut(s)	1396
PflFI	GACNNNGTC	3 cut(s)	1148, 1301, 1454
PflMI	CCANNNNNTGG	3 cut(s)	1329, 1492, 1509
PkrI	GCNGC	7 cut(s)	107, 270, 518, 542, 1255, 1293, 1311
PleI	GAGTC	6 cut(s)	521, 633, 736, 1292, 1324, 1445
PluTI	GGCGCC	2 cut(s)	846, 876
PpsI	GAGTC	6 cut(s)	521, 633, 736, 1292, 1324, 1445
PshAI	GACNNNNGTC	1 cut(s)	554
Psp124BI	GAGCTC	1 cut(s)	453
Psp6I	CCWGG	2 cut(s)	501, 593
PspGI	CCWGG	2 cut(s)	501, 593
PspLI	CGTACG	1 cut(s)	1396
PspN4I	GGNNCC	6 cut(s)	365, 366, 551, 844, 874, 1351
PspOMI	GGGCCC	1 cut(s)	363
PspPI	GGNCC	9 cut(s)	363, 364, 393, 505, 549, 1350, 1401, 1483, 1500
PspXI	VCTCGAGB	1 cut(s)	1244
PsuI	RGATCY	1 cut(s)	113
PsyI	GACNNNGTC	3 cut(s)	1148, 1301, 1454
PteI	GCGCGC	1 cut(s)	893
RigI	GGCCGGCC	1 cut(s)	1260
RsaI	GTAC	2 cut(s)	1398, 1418
RsaNI	GTAC	2 cut(s)	1397, 1417
RseI	CAYNNNNRTG	1 cut(s)	437
SacI	GAGCTC	1 cut(s)	453
SaqAI	TTAA	2 cut(s)	899, 1079
SatI	GCNGC	7 cut(s)	106, 269, 517, 541, 1254, 1292, 1310
Sau3AI	GATC	6 cut(s)	58, 113, 475, 927, 1013, 1089
Sau96I	GGNCC	9 cut(s)	363, 364, 393, 505, 549, 1350, 1401, 1483, 1500
SchI	GAGTC	6 cut(s)	521, 634, 736, 1292, 1325, 1445
ScrFI	CCNGG	6 cut(s)	391, 392, 503, 595, 1219, 1354
SduI	GDGCHC	2 cut(s)	367, 453
SfaNI	GCATC	2 cut(s)	429, 1230
SfoI	GGCGCC	2 cut(s)	844, 874
Sfr274I	CTCGAG	1 cut(s)	1244
SfuI	TTCGAA	2 cut(s)	342, 585
SinI	GGWCC	2 cut(s)	549, 1483
SlaI	CTCGAG	1 cut(s)	1244
SmaI	CCCGGG	1 cut(s)	392
SmiMI	CAYNNNNRTG	1 cut(s)	437
SmlI	CTYRAG	2 cut(s)	1171, 1244
SmoI	CTYRAG	2 cut(s)	1171, 1244
SrfI	GCCCGGGC	1 cut(s)	392
Sse9I	AATT	6 cut(s)	70, 344, 611, 666, 887, 917
SseBI	AGGCCT	2 cut(s)	992, 1516
SspDI	GGCGCC	2 cut(s)	842, 872
SspI	AATATT	1 cut(s)	1467
SspMI	CTAG	3 cut(s)	20, 554, 1121
SstI	GAGCTC	1 cut(s)	453
StuI	AGGCCT	2 cut(s)	992, 1516
StyD4I	CCNGG	6 cut(s)	389, 390, 501, 593, 1217, 1352
StyI	CCWWGG	2 cut(s)	993, 1153
TaaI	ACNGT	3 cut(s)	662, 1007, 1099
TaiI	ACGT	4 cut(s)	168, 651, 1128, 1398
TaqI	TCGA	5 cut(s)	342, 585, 1245, 1305, 1334
TaqII	GACCGA	2 cut(s)	539, 632
TasI	AATT	6 cut(s)	70, 344, 611, 666, 887, 917
TauI	GCSGC	5 cut(s)	271, 519, 1256, 1294, 1312
TfiI	GAWTC	1 cut(s)	587
Tru1I	TTAA	2 cut(s)	899, 1079
Tru9I	TTAA	2 cut(s)	899, 1079
TscAI	CASTG	3 cut(s)	740, 1448, 1497
TseFI	GTSAC	3 cut(s)	22, 644, 1448
TseI	GCWGC	2 cut(s)	105, 540
Tsp45I	GTSAC	3 cut(s)	22, 644, 1448
TspDTI	ATGAA	5 cut(s)	63, 178, 210, 875, 1359
TspGWI	ACGGA	3 cut(s)	618, 1291, 1444
TspMI	CCCGGG	1 cut(s)	390
TspRI	CASTG	3 cut(s)	740, 1448, 1497
Tth111I	GACNNNGTC	3 cut(s)	1148, 1301, 1454
Van91I	CCANNNNNTGG	3 cut(s)	1329, 1492, 1509
VpaK11BI	GGWCC	2 cut(s)	549, 1483
XagI	CCTNNNNNAGG	1 cut(s)	13
XapI	RAATTY	4 cut(s)	344, 611, 887, 917
XcmI	CCANNNNNNNNNTGG	2 cut(s)	598, 1273
XhoI	CTCGAG	1 cut(s)	1244
XmaI	CCCGGG	1 cut(s)	390
XspI	CTAG	3 cut(s)	20, 554, 1121
Zsp2I	ATGCAT	1 cut(s)	1347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.