Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0019132

Physical Location & Seq

Genomic Coordinates Forward (+)

20538646 .. 20541961

Gene Structure 3316 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGTGTATCCTGTTCGGGCATGTTGAAAAAGCTATCCTATTTGAGCCAACGCACAAAGCCCAAGAGTCCAACATCTACAGCTCTAGAAGTAGAAGTTCTGTGGCATTGGGCTCTCCCCCTTCGTCGCAGCATCTCACTGTTATTGTCTTAAAAGAACGCAAAAGAAACGAAACAATCTGCGAAGTGAATGGTGATGATGCACTGGATTTGGGGTCTCAAGCTTTGTTCCAGAAACGGCGGCGCCATTTGATGAACTGGGTTCCAAGCTTCTTCTCTCCGCCCAAAACAACCCGTCTGATTTGCCGCGGTCTTCACGCAAGTAAGCATTTCTCACCCCCAAACTCCGACAACATTGTCTTCAAAGCAGTTTGTGTTAATCTTCGACAGAGGAGATGGAAACTCTTAGAGCAGATATCCCCCTCTCTAACCAGTTCATTAGTCAGCCGTGTTGTTCGCGAGTTTCGGAACTCGCCGCAGTTGGCCTTAGAATTTTACAACTGGGTTCACAGGAACAGGAACTTTCCTCAGTTTTTGGAATCTTCTTGTACTGTAATTCATGTTTTGATCGATTCTAGGAGGTACGATGATGCCTTGTCTCTTATGGAGAGTCTAATGGGGGCAGAGGGTTTGCCCCCATTGGATGTTTTGGAAGGGTTGATTACTAGTTGTGGTTGTTCAAGCCCTGCAGTGTTTGATGCGTTTGTGAGGGCTTGTACTCGGTTCGGGGACTCCGAGGGTGCTTATGAGGTGATCAAGAAGCTGAGATTGGATGGTTATTGGGTTTCGATTCACGCTTGGAATAACTTTCTTAACCATGTGATTAAGTTGAACGAGATTGATAGGTTTTGGAAGATGTATAAGGAAATGCGTTCATATGGGTATGTTGAAAATGTTAATACCTTCAATTTGGTTATTTATGCTCTTTGTAAGGAATGCAAGTTACTAGAAGCAATATCGGCATATTATCGGATGTTGAAGAGTGGAGTTTGGCCTAGTGTTGTTACTTTTAACATGATTATAGATGGAGCATGCAGGATGGGTGATATGGAACTTGCTTTGAAGGTTTTGAGAAAGATGGGGGTAATGTCGGAGGACTGTGTTACGCCCAATTCAGTTACTTACAATTGTATCATTAATGGGTTTTGCAAAATTGGTGGTTTATCGGTTGCAGAAGAAGTCCGTGCTGAAATGACCGAGGTAGGTGTTCCGTTCAATTTGAGGACTTATGCAACTCTAGTAGATGGATATGCAAAACGGGGGAGTTTGGAGGTGGCACTTCGATTATGCGATGAAATGGTGGAAAGGGGTTTGACCCCTAATCCTGTTGTTTACAATTCAATTATCCATCGGCTTTGCATAGAAGGAGATACTGAGGAAGCTTTTTCCTTGTTGTCTGACATGATTGAGAGGAATATATGCCCTGATGAATTCACCTACTCAATCCTCATCAAGGGGCTCACTAGAAATGGGCTTGTGACGGAAGCAATTAGATTTCATAACCACATCCTTGAGAAGAACCTCGTCAAGGATGTTTTCTCCCACAGGATCGATCAATTATCTGTGCAAAAGTTTGTTCGTGGTTTACTTCCTGACACCATCACCTATGGCACTTTGATTGATTGCCACTGCAAAGAAGGGAACATAGGAAGTGCAGTTCAGATTTATGAAAAACTGATAGTGGGGAAGGAAAAACCTAATTTGGTGATATACAATTCTGTTATCAACGGGTTATGCAAAGAGGCATCAGTGGATATTGCAAAACTTTTGATGGATTCGTTACAGAGGATGGATGTTCTTGACATTATAACCTATAACACAATTATAAACGGGGAAAAGGTTGGAATTTCATTGAATATAGTCACCTACAATATATTGATCAACTTTTTGTGCAAGTTTGGGTGTATTCAACAAGCAAAAGAACTTATGAAGGTAATGATTTCAAGGGGTGTGGTTCCTGATTTTATAACATACACCACACTCATTACCAATTTGAGTAAGAATTGCAGCCCGGAAGAAGTCATTGCATTGCATGACTACATGATATTGTCTGTCCATATCTTCCAGAAGAAAATTCAAAGATTAGCACAGTGCGTTGAGTTCAACAGTACAGCAAGGTGTATATTTGTTCTCCGTCATCTAGTATCGTTTGTGTTTTATAACAAGAATCACGCATATTCAACGTTGGTTATGTCGGCATGGAAGTTATCTTTTCTAATACATCAATTTTTTATATGCTACTCGTCTGCTGACTACATCCATATAGATATTGTTTGTTCAAACTTGTATGCAATCACTGGTAAGTTGTTATCCTTTGATCATTTACTCATGCATTTGACGTCCTTTGTTCAATACCGGTCACCCCCACTTTTCTCCTGCCATAAAGTGTTTTTGTATTCTCTTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

802

Amino Acids

91.23

Weight (kDa)

8.45

Isoelectric Point (pI)

48.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	262 - 310	2.7e-07	PPR repeat family
PPR_2	PF13041	297 - 344	1.4e-09	PPR repeat family
PPR_long	PF17177	310 - 435	1.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	328 - 359	2.7e-09	PPR repeat
PPR_2	PF13041	331 - 359	2.2e-06	PPR repeat family
PPR_1	PF12854	366 - 397	4.2e-09	PPR repeat
PPR_2	PF13041	369 - 418	4.8e-12	PPR repeat family
TPR_24	PF23276	388 - 501	4.1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	395 - 449	4.3e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	401 - 433	1.9e-06	PPR repeat
PPR_2	PF13041	407 - 440	4e-06	PPR repeat family
PPR_3	PF13812	427 - 484	1.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	435 - 467	1.3e-08	PPR repeat
PPR_2	PF13041	439 - 487	1.1e-16	PPR repeat family
PPR	PF01535	442 - 472	3.6e-06	PPR repeat
PPR_1	PF12854	470 - 499	1.2e-07	PPR repeat
PPR_1	PF12854	526 - 557	5.7e-09	PPR repeat
PPR_1	PF12854	564 - 591	1e-05	PPR repeat
PPR_2	PF13041	565 - 610	3.8e-07	PPR repeat family
PPR_1	PF12854	614 - 645	5.4e-07	PPR repeat
PPR_2	PF13041	618 - 666	2.4e-13	PPR repeat family
PPR	PF01535	620 - 650	5.3e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0019132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11710 AT1G11710
malus_domestica	MD02G1262300.v1.1 MD07G1057900.v1.1 MD07G1059400.v1.1
prunus_persica	Prupe.2G064100_v2.0.a1
pyrus_communis	pycom02g22430 pycom07g04410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1805, 1823, 1964, 2157
AasI	GACNNNNNNGTC	1 cut(s)	353
AatII	GACGTC	1 cut(s)	2339
AccB1I	GGYRCC	1 cut(s)	240
AccII	CGCG	2 cut(s)	306, 456
AciI	CCGC	5 cut(s)	238, 278, 304, 306, 473
AclI	AACGTT	1 cut(s)	2180
AclWI	GGATC	1 cut(s)	1553
AcsI	RAATTY	4 cut(s)	488, 1427, 1842, 2070
AcyI	GRCGYC	2 cut(s)	241, 2336
AfaI	GTAC	4 cut(s)	547, 581, 715, 2107
AfiI	CCNNNNNNNGG	2 cut(s)	1450, 1525
AgeI	ACCGGT	1 cut(s)	2352
AhlI	ACTAGT	1 cut(s)	662
AjuI	GAANNNNNNNTTGG	2 cut(s)	749, 781
AloI	GAACNNNNNNTCC	2 cut(s)	1638, 1670
AluBI	AGCT	6 cut(s)	32, 81, 221, 267, 760, 1379
AluI	AGCT	6 cut(s)	32, 81, 221, 267, 760, 1379
Alw26I	GTCTC	2 cut(s)	219, 600
AlwI	GGATC	1 cut(s)	1553
AoxI	GGCC	2 cut(s)	480, 989
ApeKI	GCWGC	2 cut(s)	127, 2004
ApoI	RAATTY	4 cut(s)	488, 1427, 1842, 2070
AseI	ATTAAT	1 cut(s)	1134
AsiGI	ACCGGT	1 cut(s)	2352
AspLEI	GCGC	1 cut(s)	243
AsuC2I	CCSGG	1 cut(s)	2009
AsuHPI	GGTGA	9 cut(s)	203, 324, 760, 1052, 1423, 1591, 1714, 1852, 2349
BaeI	ACNNNNGTAYC	2 cut(s)	1111, 1144
BanI	GGYRCC	1 cut(s)	240
BanII	GRGCYC	2 cut(s)	113, 1458
BbsI	GAAGAC	2 cut(s)	302, 349
BbvI	GCAGC	2 cut(s)	139, 2016
BceAI	ACGGC	2 cut(s)	251, 429
BciVI	GTATCC	1 cut(s)	17
BclI	TGATCA	3 cut(s)	750, 1875, 2314
BcnI	CCSGG	1 cut(s)	2009
BcoDI	GTCTC	2 cut(s)	219, 600
BcuI	ACTAGT	1 cut(s)	662
BfaI	CTAG	8 cut(s)	84, 573, 663, 944, 993, 1235, 1461, 2138
BfmI	CTRYAG	2 cut(s)	76, 684
BfoI	RGCGCY	1 cut(s)	244
BfuI	GTATCC	1 cut(s)	17
BisI	GCNGC	5 cut(s)	128, 239, 304, 473, 2005
BlsI	GCNGC	5 cut(s)	129, 240, 305, 474, 2006
Bme1390I	CCNGG	1 cut(s)	2009
BmiI	GGNNCC	3 cut(s)	242, 261, 1953
BmrFI	CCNGG	1 cut(s)	2009
BmrI	ACTGGG	2 cut(s)	265, 508
BmsI	GCATC	5 cut(s)	139, 187, 577, 685, 1751
BmuI	ACTGGG	2 cut(s)	265, 508
BpiI	GAAGAC	2 cut(s)	302, 349
BpuEI	CTTGAG	2 cut(s)	201, 1529
BpuMI	CCSGG	1 cut(s)	2009
Bsa29I	ATCGAT	2 cut(s)	567, 1548
BsaHI	GRCGYC	2 cut(s)	241, 2336
BsaI	GGTCTC	1 cut(s)	219
BsaJI	CCNNGG	3 cut(s)	304, 732, 1194
BsaWI	WCCGGW	1 cut(s)	2352
Bsc4I	CCNNNNNNNGG	2 cut(s)	1450, 1525
Bse118I	RCCGGY	1 cut(s)	2352
Bse1I	ACTGG	5 cut(s)	207, 260, 429, 503, 2299
Bse3DI	GCAATG	2 cut(s)	2019, 2024
BseCI	ATCGAT	2 cut(s)	567, 1548
BseDI	CCNNGG	3 cut(s)	304, 732, 1194
BseGI	GGATG	9 cut(s)	646, 775, 975, 1041, 1503, 1534, 1791, 1795, 2253
BseLI	CCNNNNNNNGG	2 cut(s)	1450, 1525
BseMI	GCAATG	2 cut(s)	2019, 2024
BseMII	CTCAG	3 cut(s)	539, 752, 1362
BseNI	ACTGG	5 cut(s)	207, 260, 429, 503, 2299
BseRI	GAGGAG	1 cut(s)	403
BseXI	GCAGC	2 cut(s)	139, 2016
BsgI	GTGCAG	1 cut(s)	1671
Bsh1236I	CGCG	2 cut(s)	306, 456
BshFI	GGCC	2 cut(s)	482, 991
BshNI	GGYRCC	1 cut(s)	240
BshTI	ACCGGT	1 cut(s)	2352
BshVI	ATCGAT	2 cut(s)	567, 1548
BsiSI	CCGG	2 cut(s)	2009, 2353
BslFI	GGGAC	1 cut(s)	740
BslI	CCNNNNNNNGG	2 cut(s)	1450, 1525
BsmAI	GTCTC	2 cut(s)	219, 600
BsmFI	GGGAC	1 cut(s)	740
BsmI	GAATGC	1 cut(s)	938
BsnI	GGCC	2 cut(s)	482, 991
Bso31I	GGTCTC	1 cut(s)	219
Bsp1286I	GDGCHC	2 cut(s)	113, 1458
Bsp143I	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
Bsp68I	TCGCGA	1 cut(s)	456
BspACI	CCGC	5 cut(s)	238, 278, 304, 306, 473
BspANI	GGCC	2 cut(s)	482, 991
BspCNI	CTCAG	3 cut(s)	538, 753, 1363
BspDI	ATCGAT	2 cut(s)	567, 1548
BspFNI	CGCG	2 cut(s)	306, 456
BspLI	GGNNCC	3 cut(s)	242, 261, 1953
BspMAI	CTGCAG	1 cut(s)	688
BspPI	GGATC	1 cut(s)	1553
BspT107I	GGYRCC	1 cut(s)	240
BspTNI	GGTCTC	1 cut(s)	219
BsrDI	GCAATG	2 cut(s)	2019, 2024
BsrFI	RCCGGY	1 cut(s)	2352
BsrI	ACTGG	5 cut(s)	207, 260, 429, 503, 2299
BssAI	RCCGGY	1 cut(s)	2352
BssECI	CCNNGG	3 cut(s)	304, 732, 1194
BssMI	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
BssNI	GRCGYC	2 cut(s)	241, 2336
Bst4CI	ACNGT	5 cut(s)	139, 550, 1097, 2088, 2105
Bst6I	CTCTTC	2 cut(s)	971, 2403
BstACI	GRCGYC	2 cut(s)	241, 2336
BstC8I	GCNNGC	1 cut(s)	1030
BstDEI	CTNAG	5 cut(s)	403, 484, 525, 761, 1371
BstDSI	CCRYGG	1 cut(s)	304
BstEII	GGTNACC	1 cut(s)	2355
BstENI	CCTNNNNNAGG	2 cut(s)	1448, 1523
BstF5I	GGATG	9 cut(s)	646, 775, 975, 1041, 1503, 1534, 1791, 1795, 2253
BstFNI	CGCG	2 cut(s)	306, 456
BstH2I	RGCGCY	1 cut(s)	244
BstHHI	GCGC	1 cut(s)	243
BstKTI	GATC	6 cut(s)	567, 753, 1548, 1552, 1878, 2317
BstMAI	GTCTC	2 cut(s)	219, 600
BstMBI	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
BstMWI	GCNNNNNNNGC	1 cut(s)	956
BstNSI	RCATGY	2 cut(s)	23, 1032
BstPI	GGTNACC	1 cut(s)	2355
BstSCI	CCNGG	1 cut(s)	2007
BstSFI	CTRYAG	2 cut(s)	76, 684
BstUI	CGCG	2 cut(s)	306, 456
BstV1I	GCAGC	2 cut(s)	139, 2016
BstV2I	GAAGAC	2 cut(s)	302, 349
Bsu15I	ATCGAT	2 cut(s)	567, 1548
BsuI	GTATCC	1 cut(s)	17
BsuRI	GGCC	2 cut(s)	482, 991
BsuTUI	ATCGAT	2 cut(s)	567, 1548
BtgI	CCRYGG	1 cut(s)	304
BtgZI	GCGATG	1 cut(s)	1302
BtsCI	GGATG	9 cut(s)	646, 775, 975, 1041, 1503, 1534, 1791, 1795, 2253
BtsI	GCAGTG	2 cut(s)	693, 1624
BtsIMutI	CAGTG	7 cut(s)	135, 200, 693, 1624, 1752, 2093, 2292
BtuMI	TCGCGA	1 cut(s)	456
Cac8I	GCNNGC	1 cut(s)	1030
CfoI	GCGC	1 cut(s)	243
Cfr10I	RCCGGY	1 cut(s)	2352
Cfr42I	CCGCGG	1 cut(s)	307
ClaI	ATCGAT	2 cut(s)	567, 1548
Csp6I	GTAC	4 cut(s)	546, 580, 714, 2106
CspAI	ACCGGT	1 cut(s)	2352
CspCI	CAANNNNNGTGG	4 cut(s)	1135, 1170, 1929, 1964
CviQI	GTAC	4 cut(s)	546, 580, 714, 2106
DdeI	CTNAG	5 cut(s)	403, 484, 525, 761, 1371
DinI	GGCGCC	1 cut(s)	242
DpnI	GATC	6 cut(s)	566, 752, 1547, 1551, 1877, 2316
DpnII	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
DrdI	GACNNNNNNGTC	1 cut(s)	353
DseDI	GACNNNNNNGTC	1 cut(s)	353
Eam1104I	CTCTTC	2 cut(s)	971, 2403
EarI	CTCTTC	2 cut(s)	971, 2403
EciI	GGCGGA	1 cut(s)	267
Eco24I	GRGCYC	2 cut(s)	113, 1458
Eco31I	GGTCTC	1 cut(s)	219
Eco32I	GATATC	1 cut(s)	414
Eco91I	GGTNACC	1 cut(s)	2355
EcoNI	CCTNNNNNAGG	2 cut(s)	1448, 1523
EcoO65I	GGTNACC	1 cut(s)	2355
EcoRI	GAATTC	1 cut(s)	1427
EcoRV	GATATC	1 cut(s)	414
EcoT22I	ATGCAT	1 cut(s)	2331
EcoT38I	GRGCYC	2 cut(s)	113, 1458
EgeI	GGCGCC	1 cut(s)	242
EheI	GGCGCC	1 cut(s)	242
FaqI	GGGAC	1 cut(s)	740
FauNDI	CATATG	1 cut(s)	874
FbaI	TGATCA	3 cut(s)	750, 1875, 2314
Fnu4HI	GCNGC	5 cut(s)	128, 239, 304, 473, 2005
FokI	GGATG	9 cut(s)	653, 782, 982, 1048, 1490, 1541, 1798, 1802, 2240
FriOI	GRGCYC	2 cut(s)	113, 1458
Fsp4HI	GCNGC	5 cut(s)	128, 239, 304, 473, 2005
FspBI	CTAG	8 cut(s)	84, 573, 663, 944, 993, 1235, 1461, 2138
GlaI	GCGC	1 cut(s)	242
GluI	GCNGC	5 cut(s)	128, 239, 304, 473, 2005
HaeII	RGCGCY	1 cut(s)	244
HaeIII	GGCC	2 cut(s)	482, 991
HapII	CCGG	2 cut(s)	2009, 2353
HhaI	GCGC	1 cut(s)	243
Hin1I	GRCGYC	2 cut(s)	241, 2336
Hin6I	GCGC	1 cut(s)	241
HinP1I	GCGC	1 cut(s)	241
HindIII	AAGCTT	3 cut(s)	219, 265, 1377
HinfI	GANTC	8 cut(s)	65, 536, 569, 607, 728, 787, 1772, 2164
HpaII	CCGG	2 cut(s)	2009, 2353
HphI	GGTGA	9 cut(s)	203, 324, 760, 1052, 1423, 1591, 1714, 1852, 2349
Hpy166II	GTNNAC	3 cut(s)	505, 1330, 1583
Hpy188I	TCNGA	8 cut(s)	297, 346, 465, 733, 969, 1090, 1396, 1659
Hpy188III	TCNNGA	8 cut(s)	84, 229, 455, 754, 1589, 1796, 1955, 2062
Hpy8I	GTNNAC	3 cut(s)	505, 1330, 1583
Hpy99I	CGWCG	1 cut(s)	127
HpyAV	CCTTC	8 cut(s)	129, 644, 910, 1054, 1355, 1628, 1678, 1921
HpyCH4III	ACNGT	5 cut(s)	139, 550, 1097, 2088, 2105
HpyCH4IV	ACGT	2 cut(s)	2180, 2336
HpyF10VI	GCNNNNNNNGC	1 cut(s)	956
HpyF3I	CTNAG	5 cut(s)	403, 484, 525, 761, 1371
HpySE526I	ACGT	2 cut(s)	2180, 2336
Hsp92I	GRCGYC	2 cut(s)	241, 2336
HspAI	GCGC	1 cut(s)	241
KasI	GGCGCC	1 cut(s)	240
Ksp22I	TGATCA	3 cut(s)	750, 1875, 2314
KspI	CCGCGG	1 cut(s)	307
Kzo9I	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
LmnI	GCTCC	1 cut(s)	1025
Lsp1109I	GCAGC	2 cut(s)	139, 2016
LweI	GCATC	5 cut(s)	139, 187, 577, 685, 1751
MaeI	CTAG	8 cut(s)	84, 573, 663, 944, 993, 1235, 1461, 2138
MaeII	ACGT	2 cut(s)	2180, 2336
MaeIII	GTNAC	8 cut(s)	939, 1000, 1099, 1114, 1474, 1776, 1858, 2355
MalI	GATC	6 cut(s)	566, 752, 1547, 1551, 1877, 2316
MboI	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
MfeI	CAATTG	1 cut(s)	1123
MhlI	GDGCHC	2 cut(s)	113, 1458
Mly113I	GGCGCC	1 cut(s)	241
MlyI	GAGTC	3 cut(s)	74, 616, 722
MmeI	TCCRAC	4 cut(s)	93, 369, 1068, 1819
Mph1103I	ATGCAT	1 cut(s)	2331
MseI	TTAA	7 cut(s)	149, 375, 810, 822, 894, 1008, 1134
MspA1I	CMGCKG	1 cut(s)	306
MspI	CCGG	2 cut(s)	2009, 2353
MspR9I	CCNGG	1 cut(s)	2009
MunI	CAATTG	1 cut(s)	1123
Mva1269I	GAATGC	1 cut(s)	938
MvnI	CGCG	2 cut(s)	306, 456
MwoI	GCNNNNNNNGC	1 cut(s)	956
NarI	GGCGCC	1 cut(s)	241
NciI	CCSGG	1 cut(s)	2009
NdeI	CATATG	1 cut(s)	874
NdeII	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
NlaIV	GGNNCC	3 cut(s)	242, 261, 1953
NmuCI	GTSAC	3 cut(s)	1474, 1858, 2355
NruI	TCGCGA	1 cut(s)	456
NsiI	ATGCAT	1 cut(s)	2331
NspI	RCATGY	2 cut(s)	23, 1032
PaeI	GCATGC	1 cut(s)	1032
PcsI	WCGNNNNNNNCGW	1 cut(s)	729
PctI	GAATGC	1 cut(s)	938
PfeI	GAWTC	5 cut(s)	536, 569, 787, 1772, 2164
PinAI	ACCGGT	1 cut(s)	2352
PkrI	GCNGC	5 cut(s)	129, 240, 305, 474, 2006
PleI	GAGTC	3 cut(s)	73, 615, 722
PluTI	GGCGCC	1 cut(s)	244
PpsI	GAGTC	3 cut(s)	73, 615, 722
PshBI	ATTAAT	1 cut(s)	1134
PsiI	TTATAA	4 cut(s)	1805, 1823, 1964, 2157
Psp1406I	AACGTT	1 cut(s)	2180
PspEI	GGTNACC	1 cut(s)	2355
PspN4I	GGNNCC	3 cut(s)	242, 261, 1953
PstI	CTGCAG	1 cut(s)	688
RruI	TCGCGA	1 cut(s)	456
RsaI	GTAC	4 cut(s)	547, 581, 715, 2107
RsaNI	GTAC	4 cut(s)	546, 580, 714, 2106
SacII	CCGCGG	1 cut(s)	307
SaqAI	TTAA	7 cut(s)	149, 375, 810, 822, 894, 1008, 1134
SatI	GCNGC	5 cut(s)	128, 239, 304, 473, 2005
Sau3AI	GATC	6 cut(s)	564, 750, 1545, 1549, 1875, 2314
SchI	GAGTC	3 cut(s)	74, 616, 722
ScrFI	CCNGG	1 cut(s)	2009
SduI	GDGCHC	2 cut(s)	113, 1458
SfaNI	GCATC	5 cut(s)	139, 187, 577, 685, 1751
SfcI	CTRYAG	2 cut(s)	76, 684
SfoI	GGCGCC	1 cut(s)	242
Sfr303I	CCGCGG	1 cut(s)	307
SgrBI	CCGCGG	1 cut(s)	307
SmlI	CTYRAG	2 cut(s)	216, 1508
SmoI	CTYRAG	2 cut(s)	216, 1508
SpeI	ACTAGT	1 cut(s)	662
SphI	GCATGC	1 cut(s)	1032
SsiI	CCGC	5 cut(s)	238, 278, 304, 306, 473
SspDI	GGCGCC	1 cut(s)	240
SspMI	CTAG	8 cut(s)	84, 573, 663, 944, 993, 1235, 1461, 2138
StyD4I	CCNGG	1 cut(s)	2007
TaaI	ACNGT	5 cut(s)	139, 550, 1097, 2088, 2105
TaiI	ACGT	2 cut(s)	2183, 2339
TaqI	TCGA	6 cut(s)	382, 567, 785, 1279, 1548, 2401
TaqII	GACCGA	1 cut(s)	1208
TatI	WGTACW	3 cut(s)	545, 713, 2105
TauI	GCSGC	3 cut(s)	241, 306, 475
TfiI	GAWTC	5 cut(s)	536, 569, 787, 1772, 2164
Tru1I	TTAA	7 cut(s)	149, 375, 810, 822, 894, 1008, 1134
Tru9I	TTAA	7 cut(s)	149, 375, 810, 822, 894, 1008, 1134
TscAI	CASTG	7 cut(s)	142, 207, 693, 1631, 1752, 2093, 2299
TseFI	GTSAC	3 cut(s)	1474, 1858, 2355
TseI	GCWGC	2 cut(s)	127, 2004
Tsp45I	GTSAC	3 cut(s)	1474, 1858, 2355
TspGWI	ACGGA	4 cut(s)	1169, 1197, 1493, 2120
TspRI	CASTG	7 cut(s)	142, 207, 693, 1631, 1752, 2093, 2299
VspI	ATTAAT	1 cut(s)	1134
XagI	CCTNNNNNAGG	2 cut(s)	1448, 1523
XapI	RAATTY	4 cut(s)	488, 1427, 1842, 2070
XbaI	TCTAGA	1 cut(s)	83
XceI	RCATGY	2 cut(s)	23, 1032
XspI	CTAG	8 cut(s)	84, 573, 663, 944, 993, 1235, 1461, 2138
ZraI	GACGTC	1 cut(s)	2337
Zsp2I	ATGCAT	1 cut(s)	2331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.