Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0010977

Physical Location & Seq

Genomic Coordinates Reverse (-)

3491738 .. 3499094

Gene Structure 7357 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGATGGGCCTCTTCAACTGCTATGTTCGCGAATACTCGTTTGTAAAGCAGCAACAGACAGCTATAAAAATGTACAAGCTTGTTGGGGAGGAGAGGTTTTTGCTATGGGCAGTGTGTAGCATCCAGTTACAGGTATTTTGTGGCAATGGGAGTGAGAAGCTATTAGCTTTAGCCGAAGGTTTGATTAAGAAACACGTTGCCTCCCACAGCTTGCATGAGCCTGAAGCTCTTATGGTCTATGTTTCCATATTGGAACAACAAGCCAAATATGGGGATGCTCTGGAAATTCTCTCTGGAAAGTTAGGATCGCTTTTGATGATTGAAGTTGATAAGCTACGCATACAGGGAAGGCTTCATGCTCGGGCAGGTGACTACACTGCTGCTGCCAGCATATTTCAAAAAATCCTAGAATTATGTCCTGATGATTGGGATTGTTTCCTACATTACCTCGGTTGTTTGCTGGAGGATGACAGCAATTGGTGCAATATGGCCAACATAGATCCATTTCATCCTCCAAAATTCATTGAGTGCAAGATTTTAAACTTGGGAGATGAAGTGTTTGATTCTCGCATGTCAAATGCATCGGATTTTGTACAGAAGTTACTAGAAAACATCGGTGATAATTTTCTAAGGTCTCCATACTTGGCAAATATTGAAATTGAAAGGAGGAGGCACTTACATGGCAAAGGGGATGCTGAGAAGTTAATGGAGTCTCTAGTCCAGTACTTTCTAAGGTGTGGTCACTTGGCCTGCTTCACTTATGATGTCGAGATGTTTCTTGAAGTTTTAACGCCTGATAAGAAGGCACAATTGCTGGGGAAGTTAAAGGAAAGCTCTCACTCCATTTCAGCTGTTCCAACAAAAGTTCTTGGGCAGTCAATAACACTCTTTAAATTTCAAGAATTGATAGGGAACACATTCAAACTTCCTGTGGGTGCCCTTAAGTCTGCTTTGCAGATGGTGGAGATGTATTGTCAAAACCTTCCACTTTCGAAGGACTTGGATTCACAAGAGAGTATGCATGGTGAGGAGCTGCTCTCAATGGCATGCAATGCGTTGATTCAGTTATTTTGGCGTACAAGGAATTTCGGCTACTATTTTGAAGCAATTATGGTATTGGAATTCGGCTTGACCATTCGGAAATATGTATGGGAGTACAAGATATTGTTGCTGCACTTATATTCCCACTTAGGTGCCCTTTCGTTAGCTTATGAGTGGTTCCGATCATTGGATGTGAAAAATATCTTGATGGAAACTGTTTCACACCATATTTTACCCCAGATGTTGGTGTCTCCCCTGTGGGCAGATCTAAATAATCTGCTAAAGGATTATCTCAAGTTTATGGATGACCACTTAAGAGAATCAGCAGACCTTACATTTCTTGCCTATCGTCATAGAAATTACTCAAAAGTAATTGAATTTATCCAGTTTAAAGAAAGACTACAACAATCCAATCAGTATCTAGTGGCGAAGGTTGAAGGACCCATTCTACAGTTAAAGCAGAATGCAGATACAATTGATGATGAAGAGACTGTTCTTGAGAGCTTGAAATGCGGTGTTCACTTTGTTGAACTCTCTAATGAGATTGGATCCAAATCGTTGACCTTCAATGAAGATTTGCAGTCCCGTCCATGGTGGACACCAACTGCAGAAAGAAACTATCTTTTAGGTCCTTTTGAAGGAGTATCCTATTGTCCAAAAGAGAACTCGGTGAAAGAAAGGGAAGCAAATGTAAGGAGAGTTATCGAGAGGAAGTCTCTTCTCCCTCGGATGATTTATTTGTCCATACAGAATGCTTCAACTTCACTCAAAGAAAATCTCGAGGCCAATGGAACGACATCTGGCTCTAAAGTCCCCTCAGAACTTAAGGGTTTGCTTGAGCGCTATGCAAAAATGTTGGGATTCACACTAAATGATGCTATAGAAGCGGTTTTGGGGGTCTCTAGTGGCCTAAAGTCATTTGAGGTCTTTGGTGCGGACTTGATTGACTGGATAAATTTTTCTGTGTTTCTGAATGCATGGAACTTGAGTTCCCATGAAATTGGGCAAGCAAATGGTGATGCAGGTCTGTCTCTAGCATGGCACTGTGTGGATTCGCTGTTGGAGAAGTATGTTTCGGAGAAAGTTAGCTCGATGGAGACTCTAATTAGCTCTCCCTGGGTTGATGTTCCACTTCTGGTTCAGTTGGTTACAGAACCTTTGGCCTGGCACGCTCTTGTAATTCAATCTTGTACTCGGTCATCTCATCCGTCTGGAAAGAAGAAGAAGAAAACTGGAGTTGTGGATCATTCTAGTCTGTCCCATATGCGGGATTCTGTCCAGTCTCTGTGTAATACTCTGGAAAAAGTTATGAAATGGTTAAGAGAACAGATCAACAGGCCAGAGGATGAAAGTTTAGACACTTTACTCTCCTCTTTGCAGAATAAAGGACAGAATGAAGGCCCTGGGCAGGTTTTCCATATCCTAGAAACTTATATCTCATCCGTAGATGACACAGAGGTCGGTGATAGAATTTCCCGAGCATTGAAGTCTTGGAGTCCTCCTGATGTTGCACGGAAGCTAATAACTGGGAAATGTACGGTGCTGTCTGAGTTTCTAAGGATCTGTGGATCCAAACTAAAGGTGTTGCAGACATTGAAACAGCAGATAGCTCAAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005829 GO:0005911 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006911 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0010324 GO:0010467 GO:0016043 GO:0016192 GO:0017196 GO:0018193 GO:0018206 GO:0019538 GO:0030054 GO:0031248 GO:0031365 GO:0031414 GO:0031416 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051604 GO:0055044 GO:0061024 GO:0071704 GO:0071840 GO:0098657 GO:0099024 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NatB_MDM20

Protein Analysis

887

Amino Acids

100.62

Weight (kDa)

5.97

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NatB_MDM20	PF09797	184 - 509	9.3e-54	N-acetyltransferase B complex (NatB) non catalytic subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58450 AT5G58450
fragaria_vesca	FvH4_3g39760
malus_domestica	MD03G1056500.v1.1 MD11G1058300.v1.1
prunus_persica	Prupe.6G048400_v2.0.a1
pyrus_communis	pycom03g04480 pycom11g04830
rosa_chinensis	RchiOBHm_Chr5g0071641
rosa_laevigata	RLG00000036235
rosa_multiflora	Rmu_sc0005745.1_g000032
rosa_roxburghii	Rroxscaffold_1G00009550
rosa_rugosa	Rorug05G0413800 Rorug05G0413800 Rorug05G0413800
rosa_samantha	Rh5AG469800 Rh5BG489100 Rh5CG513100 Rh5DG499700
rosa_wichuraiana	Rw5G043650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	356
AasI	GACNNNNNNGTC	1 cut(s)	2498
Acc36I	ACCTGC	3 cut(s)	356, 2054, 2440
AccB1I	GGYRCC	2 cut(s)	935, 1193
AccB7I	CCANNNNNTGG	1 cut(s)	1285
AccII	CGCG	1 cut(s)	30
AciI	CCGC	4 cut(s)	1554, 1928, 1976, 2308
AclWI	GGATC	8 cut(s)	313, 494, 1584, 1597, 2292, 2604, 2609, 2617
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	8 cut(s)	285, 518, 893, 1084, 1121, 1418, 1996, 2511
AcuI	CTGAAG	1 cut(s)	243
AdeI	CACNNNGTG	1 cut(s)	2089
AfaI	GTAC	7 cut(s)	74, 594, 725, 1078, 1157, 2233, 2578
AfeI	AGCGCT	1 cut(s)	1883
AfiI	CCNNNNNNNGG	9 cut(s)	130, 270, 1228, 1285, 1632, 1679, 2307, 2308, 2449
AflII	CTTAAG	3 cut(s)	941, 1354, 1865
AflIII	ACRYGT	1 cut(s)	193
AjnI	CCWGG	3 cut(s)	2156, 2204, 2443
AleI	CACNNNNGTG	1 cut(s)	1191
AloI	GAACNNNNNNTCC	4 cut(s)	2014, 2015, 2046, 2047
Alw26I	GTCTC	9 cut(s)	639, 717, 1296, 1523, 1761, 1945, 2076, 2132, 2328
AlwI	GGATC	8 cut(s)	313, 494, 1584, 1597, 2292, 2604, 2609, 2617
AlwNI	CAGNNNCTG	1 cut(s)	2326
Ama87I	CYCGRG	3 cut(s)	360, 1820, 2517
Aor51HI	AGCGCT	1 cut(s)	1883
AoxI	GGCC	8 cut(s)	7, 489, 747, 1824, 1948, 2202, 2378, 2440
ApeKI	GCWGC	5 cut(s)	49, 380, 383, 1033, 1171
ApoI	RAATTY	8 cut(s)	285, 518, 893, 1084, 1121, 1418, 1996, 2511
Asp700I	GAANNNNTTC	1 cut(s)	917
AspLEI	GCGC	1 cut(s)	1884
AspS9I	GGNCC	4 cut(s)	7, 1481, 1670, 2441
AsuHPI	GGTGA	6 cut(s)	380, 629, 1037, 1723, 2069, 2516
AsuII	TTCGAA	1 cut(s)	992
AvaI	CYCGRG	3 cut(s)	360, 1820, 2517
AvaII	GGWCC	2 cut(s)	1481, 1670
BaeGI	GKGCMC	2 cut(s)	940, 1198
BalI	TGGCCA	1 cut(s)	491
BamHI	GGATCC	2 cut(s)	1589, 2609
BanI	GGYRCC	2 cut(s)	935, 1193
BbvI	GCAGC	5 cut(s)	61, 367, 370, 1020, 1158
BccI	CCATC	3 cut(s)	952, 1243, 2128
BciT130I	CCWGG	3 cut(s)	2158, 2206, 2445
BciVI	GTATCC	1 cut(s)	1696
BcoDI	GTCTC	9 cut(s)	639, 717, 1296, 1523, 1761, 1945, 2076, 2132, 2328
BfaI	CTAG	8 cut(s)	407, 605, 716, 1463, 1944, 2075, 2292, 2465
BfmI	CTRYAG	3 cut(s)	1490, 1647, 1920
BfoI	RGCGCY	1 cut(s)	1885
BfrI	CTTAAG	3 cut(s)	941, 1354, 1865
BfuAI	ACCTGC	3 cut(s)	356, 2054, 2440
BfuI	GTATCC	1 cut(s)	1696
BglII	AGATCT	1 cut(s)	1306
BisI	GCNGC	5 cut(s)	50, 381, 384, 1034, 1172
BlsI	GCNGC	5 cut(s)	51, 382, 385, 1035, 1173
BmcAI	AGTACT	1 cut(s)	725
Bme1390I	CCNGG	3 cut(s)	2158, 2206, 2445
Bme18I	GGWCC	2 cut(s)	1481, 1670
BmeT110I	CYCGRG	3 cut(s)	360, 1820, 2517
BmgT120I	GGNCC	4 cut(s)	7, 1481, 1670, 2441
BmiI	GGNNCC	6 cut(s)	937, 1195, 1220, 1483, 1591, 2611
BmrFI	CCNGG	3 cut(s)	2158, 2206, 2445
BmrI	ACTGGG	1 cut(s)	2577
BmsI	GCATC	6 cut(s)	129, 265, 590, 682, 1906, 2050
BmuI	ACTGGG	1 cut(s)	2577
BplI	GAGNNNNNCTC	4 cut(s)	1022, 1054, 1741, 1773
BpmI	CTGGAG	2 cut(s)	482, 2295
Bpu14I	TTCGAA	1 cut(s)	992
BpuEI	CTTGAG	5 cut(s)	1319, 1559, 1898, 2047, 2637
BsaBI	GATNNNNATC	1 cut(s)	1594
BsaI	GGTCTC	2 cut(s)	639, 1945
BsaJI	CCNNGG	7 cut(s)	448, 1631, 1766, 2156, 2157, 2443, 2444
BsaXI	ACNNNNNCTCC	6 cut(s)	80, 110, 185, 215, 540, 570
Bsc4I	CCNNNNNNNGG	9 cut(s)	130, 270, 1228, 1285, 1632, 1679, 2307, 2308, 2449
Bse1I	ACTGG	7 cut(s)	124, 721, 1426, 1994, 2278, 2320, 2572
Bse3DI	GCAATG	2 cut(s)	151, 1057
Bse8I	GATNNNNATC	1 cut(s)	1594
BseBI	CCWGG	3 cut(s)	2158, 2206, 2445
BseDI	CCNNGG	7 cut(s)	448, 1631, 1766, 2156, 2157, 2443, 2444
BseJI	GATNNNNATC	1 cut(s)	1594
BseLI	CCNNNNNNNGG	9 cut(s)	130, 270, 1228, 1285, 1632, 1679, 2307, 2308, 2449
BseMI	GCAATG	2 cut(s)	151, 1057
BseMII	CTCAG	3 cut(s)	687, 1872, 2580
BseNI	ACTGG	7 cut(s)	124, 721, 1426, 1994, 2278, 2320, 2572
BseRI	GAGGAG	4 cut(s)	104, 682, 1043, 2401
BseSI	GKGCMC	2 cut(s)	940, 1198
BseXI	GCAGC	5 cut(s)	61, 367, 370, 1020, 1158
BseYI	CCCAGC	1 cut(s)	814
BsgI	GTGCAG	1 cut(s)	1157
Bsh1236I	CGCG	1 cut(s)	30
BshFI	GGCC	8 cut(s)	9, 491, 749, 1826, 1950, 2204, 2380, 2442
BshNI	GGYRCC	2 cut(s)	935, 1193
BsiHKCI	CYCGRG	3 cut(s)	360, 1820, 2517
BslFI	GGGAC	3 cut(s)	1609, 1838, 2284
BslI	CCNNNNNNNGG	9 cut(s)	130, 270, 1228, 1285, 1632, 1679, 2307, 2308, 2449
BsmAI	GTCTC	9 cut(s)	639, 717, 1296, 1523, 1761, 1945, 2076, 2132, 2328
BsmFI	GGGAC	3 cut(s)	1609, 1838, 2284
BsmI	GAATGC	3 cut(s)	1510, 1798, 2020
BsnI	GGCC	8 cut(s)	9, 491, 749, 1826, 1950, 2204, 2380, 2442
Bso31I	GGTCTC	2 cut(s)	639, 1945
BsoBI	CYCGRG	3 cut(s)	360, 1820, 2517
Bsp119I	TTCGAA	1 cut(s)	992
Bsp1286I	GDGCHC	2 cut(s)	940, 1198
Bsp1407I	TGTACA	2 cut(s)	72, 592
Bsp143I	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
Bsp19I	CCATGG	1 cut(s)	1631
Bsp68I	TCGCGA	1 cut(s)	30
BspACI	CCGC	4 cut(s)	1554, 1928, 1976, 2308
BspANI	GGCC	8 cut(s)	9, 491, 749, 1826, 1950, 2204, 2380, 2442
BspCNI	CTCAG	3 cut(s)	688, 1871, 2581
BspFNI	CGCG	1 cut(s)	30
BspLI	GGNNCC	6 cut(s)	937, 1195, 1220, 1483, 1591, 2611
BspMAI	CTGCAG	1 cut(s)	1651
BspMI	ACCTGC	3 cut(s)	356, 2054, 2440
BspPI	GGATC	8 cut(s)	313, 494, 1584, 1597, 2292, 2604, 2609, 2617
BspT104I	TTCGAA	1 cut(s)	992
BspT107I	GGYRCC	2 cut(s)	935, 1193
BspTI	CTTAAG	3 cut(s)	941, 1354, 1865
BspTNI	GGTCTC	2 cut(s)	639, 1945
BsrDI	GCAATG	2 cut(s)	151, 1057
BsrGI	TGTACA	2 cut(s)	72, 592
BsrI	ACTGG	7 cut(s)	124, 721, 1426, 1994, 2278, 2320, 2572
BssECI	CCNNGG	7 cut(s)	448, 1631, 1766, 2156, 2157, 2443, 2444
BssMI	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
BssT1I	CCWWGG	1 cut(s)	1631
Bst2UI	CCWGG	3 cut(s)	2158, 2206, 2445
Bst4CI	ACNGT	5 cut(s)	1258, 1494, 1534, 2087, 2581
Bst6I	CTCTTC	3 cut(s)	17, 1521, 1764
BstAFI	CTTAAG	3 cut(s)	941, 1354, 1865
BstAPI	GCANNNNNTGC	2 cut(s)	480, 1052
BstAUI	TGTACA	2 cut(s)	72, 592
BstBI	TTCGAA	1 cut(s)	992
BstC8I	GCNNGC	6 cut(s)	212, 388, 751, 1048, 2049, 2211
BstDEI	CTNAG	7 cut(s)	629, 696, 731, 1189, 1858, 2589, 2597
BstDSI	CCRYGG	1 cut(s)	1631
BstENI	CCTNNNNNAGG	1 cut(s)	1677
BstFNI	CGCG	1 cut(s)	30
BstH2I	RGCGCY	1 cut(s)	1885
BstHHI	GCGC	1 cut(s)	1884
BstKTI	GATC	9 cut(s)	308, 502, 1226, 1309, 1592, 2287, 2373, 2604, 2612
BstMAI	GTCTC	9 cut(s)	639, 717, 1296, 1523, 1761, 1945, 2076, 2132, 2328
BstMBI	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
BstMWI	GCNNNNNNNGC	6 cut(s)	27, 480, 1052, 1551, 1925, 2210
BstNI	CCWGG	3 cut(s)	2158, 2206, 2445
BstNSI	RCATGY	2 cut(s)	574, 1050
BstSCI	CCNGG	3 cut(s)	2156, 2204, 2443
BstSFI	CTRYAG	3 cut(s)	1490, 1647, 1920
BstSLI	GKGCMC	2 cut(s)	940, 1198
BstUI	CGCG	1 cut(s)	30
BstV1I	GCAGC	5 cut(s)	61, 367, 370, 1020, 1158
BstX2I	RGATCY	5 cut(s)	499, 1306, 1589, 2601, 2609
BstXI	CCANNNNNNTGG	1 cut(s)	2042
BstYI	RGATCY	5 cut(s)	499, 1306, 1589, 2601, 2609
BsuI	GTATCC	1 cut(s)	1696
BsuRI	GGCC	8 cut(s)	9, 491, 749, 1826, 1950, 2204, 2380, 2442
BtgI	CCRYGG	1 cut(s)	1631
BtsI	GCAGTG	2 cut(s)	117, 375
BtsIMutI	CAGTG	3 cut(s)	117, 375, 2083
BtuMI	TCGCGA	1 cut(s)	30
BveI	ACCTGC	3 cut(s)	356, 2054, 2440
Cac8I	GCNNGC	6 cut(s)	212, 388, 751, 1048, 2049, 2211
CaiI	CAGNNNCTG	1 cut(s)	2326
CfoI	GCGC	1 cut(s)	1884
Cfr13I	GGNCC	4 cut(s)	7, 1481, 1670, 2441
Csp6I	GTAC	7 cut(s)	73, 593, 724, 1077, 1156, 2232, 2577
CviQI	GTAC	7 cut(s)	73, 593, 724, 1077, 1156, 2232, 2577
DdeI	CTNAG	7 cut(s)	629, 696, 731, 1189, 1858, 2589, 2597
DpnI	GATC	9 cut(s)	307, 501, 1225, 1308, 1591, 2286, 2372, 2603, 2611
DpnII	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
DraI	TTTAAA	3 cut(s)	540, 892, 1432
DraIII	CACNNNGTG	1 cut(s)	2089
DrdI	GACNNNNNNGTC	1 cut(s)	2498
DseDI	GACNNNNNNGTC	1 cut(s)	2498
EaeI	YGGCCR	1 cut(s)	489
Eam1104I	CTCTTC	3 cut(s)	17, 1521, 1764
EarI	CTCTTC	3 cut(s)	17, 1521, 1764
Eco130I	CCWWGG	1 cut(s)	1631
Eco31I	GGTCTC	2 cut(s)	639, 1945
Eco47I	GGWCC	2 cut(s)	1481, 1670
Eco47III	AGCGCT	1 cut(s)	1883
Eco57I	CTGAAG	1 cut(s)	243
Eco88I	CYCGRG	3 cut(s)	360, 1820, 2517
EcoNI	CCTNNNNNAGG	1 cut(s)	1677
EcoO109I	RGGNCCY	3 cut(s)	1481, 1670, 2441
EcoRI	GAATTC	1 cut(s)	1121
EcoRII	CCWGG	3 cut(s)	2156, 2204, 2443
EcoT14I	CCWWGG	1 cut(s)	1631
EcoT22I	ATGCAT	3 cut(s)	583, 1023, 2020
ErhI	CCWWGG	1 cut(s)	1631
FaqI	GGGAC	3 cut(s)	1609, 1838, 2284
FauI	CCCGC	1 cut(s)	2301
FauNDI	CATATG	1 cut(s)	2304
Fnu4HI	GCNGC	5 cut(s)	50, 381, 384, 1034, 1172
Fsp4HI	GCNGC	5 cut(s)	50, 381, 384, 1034, 1172
FspBI	CTAG	8 cut(s)	407, 605, 716, 1463, 1944, 2075, 2292, 2465
GlaI	GCGC	1 cut(s)	1883
GluI	GCNGC	5 cut(s)	50, 381, 384, 1034, 1172
GsaI	CCCAGC	1 cut(s)	818
GsuI	CTGGAG	2 cut(s)	482, 2295
HaeII	RGCGCY	1 cut(s)	1885
HaeIII	GGCC	8 cut(s)	9, 491, 749, 1826, 1950, 2204, 2380, 2442
HhaI	GCGC	1 cut(s)	1884
Hin6I	GCGC	1 cut(s)	1882
HinP1I	GCGC	1 cut(s)	1882
HincII	GTYRAC	1 cut(s)	1602
HindII	GTYRAC	1 cut(s)	1602
HindIII	AAGCTT	1 cut(s)	77
HphI	GGTGA	6 cut(s)	380, 629, 1037, 1723, 2069, 2516
Hpy166II	GTNNAC	3 cut(s)	1561, 1602, 1638
Hpy188I	TCNGA	9 cut(s)	586, 1140, 1223, 1770, 1861, 2013, 2119, 2590, 2660
Hpy8I	GTNNAC	3 cut(s)	1561, 1602, 1638
HpyCH4III	ACNGT	5 cut(s)	1258, 1494, 1534, 2087, 2581
HpyCH4IV	ACGT	1 cut(s)	195
HpyF10VI	GCNNNNNNNGC	6 cut(s)	27, 480, 1052, 1551, 1925, 2210
HpyF3I	CTNAG	7 cut(s)	629, 696, 731, 1189, 1858, 2589, 2597
HpySE526I	ACGT	1 cut(s)	195
HspAI	GCGC	1 cut(s)	1882
Kzo9I	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
LmnI	GCTCC	1 cut(s)	1030
Lsp1109I	GCAGC	5 cut(s)	61, 367, 370, 1020, 1158
LweI	GCATC	6 cut(s)	129, 265, 590, 682, 1906, 2050
MaeI	CTAG	8 cut(s)	407, 605, 716, 1463, 1944, 2075, 2292, 2465
MaeII	ACGT	1 cut(s)	195
MaeIII	GTNAC	5 cut(s)	126, 368, 600, 740, 2188
MalI	GATC	9 cut(s)	307, 501, 1225, 1308, 1591, 2286, 2372, 2603, 2611
MboI	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
MboII	GAAGA	7 cut(s)	4, 1538, 1625, 1751, 2272, 2275, 2278
MfeI	CAATTG	3 cut(s)	475, 809, 1515
MflI	RGATCY	5 cut(s)	499, 1306, 1589, 2601, 2609
MhlI	GDGCHC	2 cut(s)	940, 1198
MlsI	TGGCCA	1 cut(s)	491
MluNI	TGGCCA	1 cut(s)	491
MlyI	GAGTC	3 cut(s)	719, 2134, 2545
MmeI	TCCRAC	2 cut(s)	881, 2082
Mox20I	TGGCCA	1 cut(s)	491
Mph1103I	ATGCAT	3 cut(s)	583, 1023, 2020
MroXI	GAANNNNTTC	1 cut(s)	917
MscI	TGGCCA	1 cut(s)	491
MslI	CAYNNNNRTG	2 cut(s)	678, 1191
Msp20I	TGGCCA	1 cut(s)	491
MspA1I	CMGCKG	1 cut(s)	851
MspCI	CTTAAG	3 cut(s)	941, 1354, 1865
MspR9I	CCNGG	3 cut(s)	2158, 2206, 2445
MunI	CAATTG	3 cut(s)	475, 809, 1515
Mva1269I	GAATGC	3 cut(s)	1510, 1798, 2020
MvaI	CCWGG	3 cut(s)	2158, 2206, 2445
MvnI	CGCG	1 cut(s)	30
MwoI	GCNNNNNNNGC	6 cut(s)	27, 480, 1052, 1551, 1925, 2210
NcoI	CCATGG	1 cut(s)	1631
NdeI	CATATG	1 cut(s)	2304
NdeII	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
NlaIV	GGNNCC	6 cut(s)	937, 1195, 1220, 1483, 1591, 2611
NmuCI	GTSAC	2 cut(s)	368, 740
NruI	TCGCGA	1 cut(s)	30
NsiI	ATGCAT	3 cut(s)	583, 1023, 2020
NspI	RCATGY	2 cut(s)	574, 1050
NspV	TTCGAA	1 cut(s)	992
OliI	CACNNNNGTG	1 cut(s)	1191
PaeI	GCATGC	1 cut(s)	1050
PaeR7I	CTCGAG	1 cut(s)	1820
PaqCI	CACCTGC	1 cut(s)	356
PasI	CCCWGGG	2 cut(s)	2157, 2444
PctI	GAATGC	3 cut(s)	1510, 1798, 2020
PdmI	GAANNNNTTC	1 cut(s)	917
PfeI	GAWTC	7 cut(s)	563, 1004, 1060, 1361, 1902, 2093, 2312
PflMI	CCANNNNNTGG	1 cut(s)	1285
PkrI	GCNGC	5 cut(s)	51, 382, 385, 1035, 1173
PleI	GAGTC	3 cut(s)	718, 2134, 2544
PpsI	GAGTC	3 cut(s)	718, 2134, 2544
PpuMI	RGGWCCY	2 cut(s)	1481, 1670
Psp5II	RGGWCCY	2 cut(s)	1481, 1670
Psp6I	CCWGG	3 cut(s)	2156, 2204, 2443
PspFI	CCCAGC	1 cut(s)	814
PspGI	CCWGG	3 cut(s)	2156, 2204, 2443
PspN4I	GGNNCC	6 cut(s)	937, 1195, 1220, 1483, 1591, 2611
PspPI	GGNCC	4 cut(s)	7, 1481, 1670, 2441
PspPPI	RGGWCCY	2 cut(s)	1481, 1670
PstI	CTGCAG	1 cut(s)	1651
PstNI	CAGNNNCTG	1 cut(s)	2326
PsuI	RGATCY	5 cut(s)	499, 1306, 1589, 2601, 2609
PvuII	CAGCTG	1 cut(s)	851
RruI	TCGCGA	1 cut(s)	30
RsaI	GTAC	7 cut(s)	74, 594, 725, 1078, 1157, 2233, 2578
RsaNI	GTAC	7 cut(s)	73, 593, 724, 1077, 1156, 2232, 2577
RseI	CAYNNNNRTG	2 cut(s)	678, 1191
SatI	GCNGC	5 cut(s)	50, 381, 384, 1034, 1172
Sau3AI	GATC	9 cut(s)	305, 499, 1223, 1306, 1589, 2284, 2370, 2601, 2609
Sau96I	GGNCC	4 cut(s)	7, 1481, 1670, 2441
ScaI	AGTACT	1 cut(s)	725
SchI	GAGTC	3 cut(s)	719, 2134, 2545
ScrFI	CCNGG	3 cut(s)	2158, 2206, 2445
SduI	GDGCHC	2 cut(s)	940, 1198
SfaNI	GCATC	6 cut(s)	129, 265, 590, 682, 1906, 2050
SfcI	CTRYAG	3 cut(s)	1490, 1647, 1920
Sfr274I	CTCGAG	1 cut(s)	1820
SfuI	TTCGAA	1 cut(s)	992
SinI	GGWCC	2 cut(s)	1481, 1670
SlaI	CTCGAG	1 cut(s)	1820
SmiMI	CAYNNNNRTG	2 cut(s)	678, 1191
SmlI	CTYRAG	9 cut(s)	941, 1334, 1354, 1538, 1820, 1865, 1877, 2026, 2652
SmoI	CTYRAG	9 cut(s)	941, 1334, 1354, 1538, 1820, 1865, 1877, 2026, 2652
SphI	GCATGC	1 cut(s)	1050
SsiI	CCGC	4 cut(s)	1554, 1928, 1976, 2308
SspI	AATATT	1 cut(s)	652
SspMI	CTAG	8 cut(s)	407, 605, 716, 1463, 1944, 2075, 2292, 2465
StyD4I	CCNGG	3 cut(s)	2156, 2204, 2443
StyI	CCWWGG	1 cut(s)	1631
TaaI	ACNGT	5 cut(s)	1258, 1494, 1534, 2087, 2581
TaiI	ACGT	1 cut(s)	198
TaqI	TCGA	5 cut(s)	768, 992, 1746, 1821, 2132
TaqII	GACCGA	1 cut(s)	2226
TatI	WGTACW	5 cut(s)	72, 592, 723, 1155, 2231
TfiI	GAWTC	7 cut(s)	563, 1004, 1060, 1361, 1902, 2093, 2312
TscAI	CASTG	3 cut(s)	117, 382, 2090
TseFI	GTSAC	2 cut(s)	368, 740
TseI	GCWGC	5 cut(s)	49, 380, 383, 1033, 1171
Tsp45I	GTSAC	2 cut(s)	368, 740
TspGWI	ACGGA	3 cut(s)	2238, 2473, 2569
TspRI	CASTG	3 cut(s)	117, 382, 2090
Van91I	CCANNNNNTGG	1 cut(s)	1285
Vha464I	CTTAAG	3 cut(s)	941, 1354, 1865
VpaK11BI	GGWCC	2 cut(s)	1481, 1670
XagI	CCTNNNNNAGG	1 cut(s)	1677
XapI	RAATTY	8 cut(s)	285, 518, 893, 1084, 1121, 1418, 1996, 2511
XceI	RCATGY	2 cut(s)	574, 1050
XhoI	CTCGAG	1 cut(s)	1820
XmnI	GAANNNNTTC	1 cut(s)	917
XspI	CTAG	8 cut(s)	407, 605, 716, 1463, 1944, 2075, 2292, 2465
ZrmI	AGTACT	1 cut(s)	725
Zsp2I	ATGCAT	3 cut(s)	583, 1023, 2020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.