Rroxscaffold_1G00009550

Phagocyte signaling-impaired protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
12068648 .. 12083074
14427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00009550.1

Sequence Viewer

Length: 4032 bp
ATGGCGTCGAAGTTCGGGTTGGCCGGCGGGATACCGGAGCGGCGGGTCCGGCCCATTTGGGACGCCATCGATTCTCGCCAATTCAAAAACGCTCTCAAGCTCGTCACCGCTCTCCTCTCCAAGTTTCCCAATTCCCCTTACTGTCTGGCGCTTAAAGCTCTCATCCTGGAAAGGATGGGGAAATCGGAAGAAGCATTGTCGCTTTGCCTCAACGCCAAGGAGCATTTGCACAAAAACGACTCCGTTTTGATGGACGATCTCACTCTCAGCACCTTGCAAATCGTCTTCCAACGCCTCGATCACCTGGAAATGGCAACCAGTTGTTACGAATATGCTTGCGGTAAATTTCCGAGCAATTTGGAGCTGATGATGGGGCTCTTTAACTGCTATGTTCGCGAATACTCGTTTGTCAAGCAGCAACAGACAGCTATAAGAATGTACAAACTTGTTGGCGAGGAGAGGTTTTTGCTCTGGGCTGTGTGTAGCATCCAGTTACAGGTGTTTTGTGGAAACGGAGGAGAAAAGCTGCTACTCTTAGCTGAAGGCTTAGTGAAGAAGCATGTTGCCTCTCATAGCTTGCATGAGCCTGAAGCTCTCATGGTCTATATTTCCATATTGGAACAACAAGCAAAGTATGGGGATGCTTTGGAGATTCTCTCTGGTAAATTAGGATCGCTTTTACTGGTTGAAGTTGATAAGCTACGCATACAGGGGAGGCTGCTTGCTCGGGTGGGTGACTACGCTGCTGCCGCCATAATATTTCAAAAAATTCTCGAACTATGTCCTGATGATTGGGAATGTTTCCTACATTATCTAGGCTGTTTGCTGGAGGATGACAGCAATTGGTGCAATAGGGCCATAACAGATCCAATTCATCCTCCGAAATTTGCTGAGTGCAAGATTTCAAACTTGACAGATGAAGTGTTTGATTCTCGTATGTCAAATGCATCAGAATTTGTACAAAAGTTACAAGGAAATACTGGCAATAATTTTGCAAGGTGTCCATACTTGGCAAATATTGAAATTGAAAGGAGAAAGTGCTTACATGGCAAGGGGGATGATGGCAAGTTAATGGAGGCTCTAATCCAGTACTTTTTTGGGTTTGGTCACTTGGCCTGCTTCACTTCTGATGTTGAGATGTTTCTTGAAGTCTTAACTCCTGATAAGAAGGCAGAACTCTTGGGGAAGTTAAGGGAAAGTTCTGCCTCCATTTCAGCTGTGCCAGCAAAAGTACTTGGGCAGTCAATAACACTCTTTAAAATTCAAGAACTGATCGGAAACGTGTCCAAGCTTACTATTGTTGAACTTGAGGGCTCTGTTGTGCAGATGGTGGAGATGTACTGTAAAAACCTACCACTTTCAAAGGACTTGGATTCTCAAGAGAGTATGCATGGGGAAGAGCTGCTATCACTAGCTTGCAATGTATTGATTCAGTTATACTGGCGCACCAGGAATGTTGGCTACTTTGTTGAGGCAATCATGTTGTTGGAGTTTGGCTTGACTATACGAAGACATGTATGGCAGTACAAGATCTTGTTGCTGCATTTGTATTCCCACTTGGGTGCCCTTTCTCTAGCATATGAATGGTTCAAATCACTTGATGTTAAAAATATCTTGATGGAAACTGTGTCACACCACATTTTACCCCAGATGCTGGTGTCTCCCCTCTGGGTAGATATGAATAATCTGCTAAAGGATTATCTCAAGTTTATGGATGACCATTTGCGAGAATCAGCGGATCTTACGTTTCTTGCCTATCGCCATAGAAACTACTCAAAAGTAATTGAATTTGTCCAGTTTAAAGAGCGATTACAACATTCTAATCAGTATCTAGTGGCGAGGGTTGAAGGACCCATTCTTCAGTTAAAGCAGAATGCAGTTAACATTGAAGAGGAAGAGGCGGTTCTTGAAAGCTTGAAATGTGGTATTCACTTTGTTGAACTCTCTAATGAGATTGGATCCAAGTCTCTGACCTTCAATGAAGATTTGCAGTCACGTCCCTGGTGGGCACCAACTTCAGAGAGAAACTATCTTTTAGGTCCTTATGAAGGAGTATCATACTATCCCAGAGAGAACTCGATGACAGAAAGGGAGGCAAATGTACGGAGCATAATTGAGAGGAAATCTCTTCTTCCTCGGATGATTTATCTGTCCATACAGAGCGCTTCAACTTCACTCAAGGAAAATCTGGAAGTCAATGGGTCAGTGTCTGACCCTAAAATCCCCTCAGAGCTGAAGATTTTGCTTGAGCGATATGCAAAGATGTTGGGATATTCATTCACTGATGCAATAGAAGTGGTCTTGGGAGTTTCTGGTGGCCAAAAGTCTTTTGAGGTCTTTGGTTCGGACTTGATTGACTGGATAAACTTTTCTGTGTTTCTGAATGCATGGAACTTGAGTTCCCATGAGATTGGGCTGGCAAATGGCCGTTGTGCAGATTCTATATTGGAGAAGTATGTTTCAGATAAAGTTAGCTCCATGGAGACTCTAATTACCTCTCCTTGGGTTGATCTTCCAATTCTGGTACAGTTAGTTACAGAGTCATTGGCCTGGCATGGTCTTGTAATTCAATCTTGTGTTCGTTCATGTTTCCCATCGGGAAAGAAGAAGAAAGAAAACTGGATTTGCAGATCAGTCCTGAAGATAGTTGCTGGGAAGTGTACAGTACTGTCCGAGTTTCTCCGAATTTCTATCACTTCTCTTTACTTTCTCCTCGGTGTAATGAAAGATTGGACAGTAGACCTGAAAAGTATTGGTGGCGAAACTTGCCGAGTGCAAATCCCATCTATCGATCACAAACCAAAGCCCCATGAGGCACAGCCACCGCTAAGTATTGAACACATTATTATGGATGACATCTCTACAATTGAGCAAATCTCTATCCTTAGTGGGAATACCAAAAAGAAAATAGCATCCCTTGAAGAGGCTGCACTTTGTGAAAGAATTTCCCATTCTTCTCGGAATCCACTAGATATGCTCCAAACAAGAATCATCAACTCTGCACTCAATCAAGAACTGTTCTTCGCCATTGCCAACCATAGATTGACTGTTGTGAGTGCTGATGCAGCCTACACCAAACCTTTCACAACCAGACTCATTATGATAGGACCTGGCCAAACTACAGATGTCCTCCTCACGGCTGATCAGCCCCCTGCTCACTACTATGCTGCTGCAAGTGTCTATCAGACTGCTCAAAATGCACCCTTTGACAACACCACCACCACTGCCATCCTTGAATACAAGTCTGCTGCTGATTGTGGTTCAAAGAAAGGGAAATTTTCAGCACCAGTACTGCCATTGTTACCATTCTTCAATGATACAGCAACTGCAACTGCATACAATGTTCAGATAAAGAGCCCTTCCCCGGTCCAAATCCCTACGCAAATCGACGAGAACCTATTTTTCATTGTAGGTTTGGGCCTAATAAACTGCACAGTTCCTAACAGCCCTCGGTGTCAAGGACCAAACAACACCCGCTTTACAGCTAGCATGAATAATGTTTCTTTTGTATTCCCAAGGACTACCTCCTTAATGCAAGCCTACTATAATGGTATACCTGGTGTCTTCACCACAGACTTTCCACCAGTTCCTCCTGTGCAATTTGATTATACTGGTAATGTGAGCAGGGGCCTATGGACACCTAGTCGTGGAACTAAGCTCTACAAGTTAAAGTATGGTTCCAGTGTACAAATTGTGTTGCAGGACACAAGTATTGTCACAACTGAGGACCATCCTATGCATCTTCATGGGTACCATTTCTATGTCGTTGGATCAGGATTTGGCAACTTCAACCCCAGAACAGATCCAGCCAAATTCAACCTCATTGACCCACCACAGAGGAACACAATTGGAACAAATCCAGGTGGATGGGTAGCTATTCGATTTGTGGCTGATAATCCAGGTGTCTGGCTGATGCACTGTCACTTGGATGCACATCTCGTCTTGGGTTTCGCAATGGCTTTTGTAGTAGAGAATGGAAATGGACCACTGCAGTCTGTCATACCACCCCCAGCAGATCTACCCCGATGTTAA

Protein Analysis

1343

Amino Acids

150.65

Weight (kDa)

6.19

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NatB_MDM20 PF09797 307 - 625 7.2e-57 N-acetyltransferase B complex (NatB) non catalytic subunit
Cu-oxidase PF00394 995 - 1082 1.6e-27 Multicopper oxidase
Cu-oxidase_2 PF07731 1192 - 1326 2.5e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010977)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 3750
AccB1I GGYRCC 3 cut(s) 1562, 2008, 3750
AccB7I CCANNNNNTGG 1 cut(s) 1654
AccBSI CCGCTC 2 cut(s) 40, 110
AccI GTMKAC 2 cut(s) 2739, 3553
AccII CGCG 1 cut(s) 396
AclWI GGATC 7 cut(s) 679, 860, 1746, 1953, 1966, 3778, 3797
AcoI YGGCCR 4 cut(s) 21, 2317, 2425, 3112
AcuI CTGAAG 6 cut(s) 561, 609, 1844, 2001, 2255, 2660
AcyI GRCGYC 2 cut(s) 5, 63
AdeI CACNNNGTG 1 cut(s) 2936
AfeI AGCGCT 1 cut(s) 2164
AfiI CCNNNNNNNGG 9 cut(s) 310, 496, 1654, 2048, 2502, 2923, 3136, 3364, 3647
AflIII ACRYGT 2 cut(s) 1281, 1513
AhdI GACNNNNNGTC 1 cut(s) 3642
AjiI CACGTC 1 cut(s) 1997
AjnI CCWGG 9 cut(s) 165, 303, 1448, 2000, 2549, 3109, 3556, 3859, 3898
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AleI CACNNNNGTG 1 cut(s) 1560
AloI GAACNNNNNNTCC 4 cut(s) 2383, 2384, 2415, 2416
Alw26I GTCTC 3 cut(s) 1665, 1971, 2477
AlwI GGATC 7 cut(s) 679, 860, 1746, 1953, 1966, 3778, 3797
AlwNI CAGNNNCTG 3 cut(s) 1654, 2210, 3326
Ama87I CYCGRG 1 cut(s) 726
Aor51HI AGCGCT 1 cut(s) 2164
Asp718I GGTACC 1 cut(s) 3750
AspLEI GCGC 3 cut(s) 151, 1446, 2165
AsuC2I CCSGG 1 cut(s) 3365
AsuHPI GGTGA 4 cut(s) 97, 293, 746, 3559
AsuNHI GCTAGC 1 cut(s) 3485
AvaI CYCGRG 1 cut(s) 726
AvaII GGWCC 8 cut(s) 46, 1850, 2039, 3107, 3367, 3461, 3727, 3983
BaeGI GKGCMC 2 cut(s) 1567, 2011
BalI TGGCCA 2 cut(s) 2319, 3114
BamHI GGATCC 1 cut(s) 1958
BanI GGYRCC 3 cut(s) 1562, 2008, 3750
BanII GRGCYC 3 cut(s) 378, 1316, 3359
BbsI GAAGAC 3 cut(s) 277, 1516, 3556
BceAI ACGGC 2 cut(s) 2412, 3153
BciT130I CCWGG 9 cut(s) 167, 305, 1450, 2002, 2551, 3111, 3558, 3861, 3900
BciVI GTATCC 1 cut(s) 24
BclI TGATCA 1 cut(s) 3142
BcnI CCSGG 1 cut(s) 3365
BcoDI GTCTC 3 cut(s) 1665, 1971, 2477
BfaI CTAG 7 cut(s) 815, 1412, 1574, 1832, 2969, 3486, 3642
BfmI CTRYAG 2 cut(s) 3120, 3989
BfoI RGCGCY 2 cut(s) 152, 2166
BfuI GTATCC 1 cut(s) 24
BglII AGATCT 2 cut(s) 1530, 4015
BmcAI AGTACT 4 cut(s) 1091, 1233, 2667, 3291
Bme18I GGWCC 8 cut(s) 46, 1850, 2039, 3107, 3367, 3461, 3727, 3983
BmeRI GACNNNNNGTC 1 cut(s) 3642
BmeT110I CYCGRG 1 cut(s) 726
BmgBI CACGTC 1 cut(s) 1997
BmiI GGNNCC 8 cut(s) 47, 1564, 1852, 1960, 2010, 3629, 3679, 3752
BmtI GCTAGC 1 cut(s) 3489
BpiI GAAGAC 3 cut(s) 277, 1516, 3556
BplI GAGNNNNNCTC 6 cut(s) 641, 673, 2110, 2142, 2861, 2893
BpmI CTGGAG 1 cut(s) 848
BpuEI CTTGAG 7 cut(s) 80, 1328, 1362, 1688, 2162, 2267, 2416
BpuMI CCSGG 1 cut(s) 3365
Bsa29I ATCGAT 2 cut(s) 69, 2790
BsaBI GATNNNNATC 1 cut(s) 3933
BsaHI GRCGYC 2 cut(s) 5, 63
BsaJI CCNNGG 9 cut(s) 216, 2000, 2135, 2478, 2501, 2713, 3363, 3449, 3515
BsaWI WCCGGW 1 cut(s) 34
Bsc4I CCNNNNNNNGG 9 cut(s) 310, 496, 1654, 2048, 2502, 2923, 3136, 3364, 3647
Bse118I RCCGGY 1 cut(s) 23
Bse3DI GCAATG 3 cut(s) 1426, 3027, 3960
Bse8I GATNNNNATC 1 cut(s) 3933
BseBI CCWGG 9 cut(s) 167, 305, 1450, 2002, 2551, 3111, 3558, 3861, 3900
BseCI ATCGAT 2 cut(s) 69, 2790
BseDI CCNNGG 9 cut(s) 216, 2000, 2135, 2478, 2501, 2713, 3363, 3449, 3515
BseJI GATNNNNATC 1 cut(s) 3933
BseLI CCNNNNNNNGG 9 cut(s) 310, 496, 1654, 2048, 2502, 2923, 3136, 3364, 3647
BseMI GCAATG 3 cut(s) 1426, 3027, 3960
BseMII CTCAG 4 cut(s) 280, 882, 2241, 3714
BseRI GAGGAG 5 cut(s) 104, 470, 531, 2702, 3122
BseSI GKGCMC 2 cut(s) 1567, 2011
BseYI CCCAGC 2 cut(s) 2651, 4009
BsgI GTGCAG 5 cut(s) 1343, 2454, 2913, 2985, 3415
Bsh1236I CGCG 1 cut(s) 396
BshNI GGYRCC 3 cut(s) 1562, 2008, 3750
BshVI ATCGAT 2 cut(s) 69, 2790
BsiHKCI CYCGRG 1 cut(s) 726
BsiSI CCGG 4 cut(s) 24, 35, 49, 3365
BslFI GGGAC 2 cut(s) 74, 1983
BslI CCNNNNNNNGG 9 cut(s) 310, 496, 1654, 2048, 2502, 2923, 3136, 3364, 3647
BsmAI GTCTC 3 cut(s) 1665, 1971, 2477
BsmFI GGGAC 2 cut(s) 74, 1983
BsmI GAATGC 2 cut(s) 1879, 2389
BsoBI CYCGRG 1 cut(s) 726
Bsp1286I GDGCHC 5 cut(s) 378, 1316, 1567, 2011, 3359
Bsp1407I TGTACA 4 cut(s) 438, 958, 2660, 3685
Bsp19I CCATGG 1 cut(s) 2478
Bsp68I TCGCGA 1 cut(s) 396
BspCNI CTCAG 4 cut(s) 279, 883, 2240, 3715
BspDI ATCGAT 2 cut(s) 69, 2790
BspFNI CGCG 1 cut(s) 396
BspLI GGNNCC 8 cut(s) 47, 1564, 1852, 1960, 2010, 3629, 3679, 3752
BspMAI CTGCAG 1 cut(s) 3993
BspOI GCTAGC 1 cut(s) 3489
BspPI GGATC 7 cut(s) 679, 860, 1746, 1953, 1966, 3778, 3797
BspQI GCTCTTC 1 cut(s) 1392
BspT107I GGYRCC 3 cut(s) 1562, 2008, 3750
BsrBI CCGCTC 2 cut(s) 40, 110
BsrDI GCAATG 3 cut(s) 1426, 3027, 3960
BsrFI RCCGGY 1 cut(s) 23
BsrGI TGTACA 4 cut(s) 438, 958, 2660, 3685
BssAI RCCGGY 1 cut(s) 23
BssECI CCNNGG 9 cut(s) 216, 2000, 2135, 2478, 2501, 2713, 3363, 3449, 3515
BssNAI GTATAC 1 cut(s) 3554
BssNI GRCGYC 2 cut(s) 5, 63
BssT1I CCWWGG 4 cut(s) 216, 2478, 2501, 3515
Bst1107I GTATAC 1 cut(s) 3554
Bst2UI CCWGG 9 cut(s) 167, 305, 1450, 2002, 2551, 3111, 3558, 3861, 3900
Bst6I CTCTTC 5 cut(s) 1392, 1884, 1890, 2133, 2916
BstACI GRCGYC 2 cut(s) 5, 63
BstAPI GCANNNNNTGC 1 cut(s) 846
BstAUI TGTACA 4 cut(s) 438, 958, 2660, 3685
BstDEI CTNAG 9 cut(s) 266, 535, 547, 891, 2227, 2828, 2885, 3654, 3723
BstDSI CCRYGG 1 cut(s) 2478
BstENI CCTNNNNNAGG 2 cut(s) 2046, 2921
BstFNI CGCG 1 cut(s) 396
BstH2I RGCGCY 2 cut(s) 152, 2166
BstHHI GCGC 3 cut(s) 151, 1446, 2165
BstMAI GTCTC 3 cut(s) 1665, 1971, 2477
BstNI CCWGG 9 cut(s) 167, 305, 1450, 2002, 2551, 3111, 3558, 3861, 3900
BstNSI RCATGY 2 cut(s) 563, 1517
BstSFI CTRYAG 2 cut(s) 3120, 3989
BstSLI GKGCMC 2 cut(s) 1567, 2011
BstUI CGCG 1 cut(s) 396
BstV2I GAAGAC 3 cut(s) 277, 1516, 3556
BstX2I RGATCY 6 cut(s) 865, 1530, 1738, 1958, 3802, 4015
BstXI CCANNNNNNTGG 3 cut(s) 2411, 3867, 3906
BstYI RGATCY 6 cut(s) 865, 1530, 1738, 1958, 3802, 4015
BstZ17I GTATAC 1 cut(s) 3554
Bsu15I ATCGAT 2 cut(s) 69, 2790
BsuI GTATCC 1 cut(s) 24
BsuTUI ATCGAT 2 cut(s) 69, 2790
BtgI CCRYGG 1 cut(s) 2478
BtrI CACGTC 1 cut(s) 1997
BtsI GCAGTG 2 cut(s) 3222, 3986
BtsIMutI CAGTG 6 cut(s) 2211, 2280, 3222, 3688, 3916, 3986
BtuMI TCGCGA 1 cut(s) 396
CaiI CAGNNNCTG 3 cut(s) 1654, 2210, 3326
CfoI GCGC 3 cut(s) 151, 1446, 2165
Cfr10I RCCGGY 1 cut(s) 23
ClaI ATCGAT 2 cut(s) 69, 2790
CseI GACGC 1 cut(s) 71
CsiI ACCWGGT 1 cut(s) 3556
CspCI CAANNNNNGTGG 2 cut(s) 2277, 2312
DdeI CTNAG 9 cut(s) 266, 535, 547, 891, 2227, 2828, 2885, 3654, 3723
DraI TTTAAA 2 cut(s) 1258, 1801
DraIII CACNNNGTG 1 cut(s) 2936
DriI GACNNNNNGTC 1 cut(s) 3642
EaeI YGGCCR 4 cut(s) 21, 2317, 2425, 3112
Eam1104I CTCTTC 5 cut(s) 1392, 1884, 1890, 2133, 2916
Eam1105I GACNNNNNGTC 1 cut(s) 3642
EarI CTCTTC 5 cut(s) 1392, 1884, 1890, 2133, 2916
Eco130I CCWWGG 4 cut(s) 216, 2478, 2501, 3515
Eco24I GRGCYC 3 cut(s) 378, 1316, 3359
Eco47I GGWCC 8 cut(s) 46, 1850, 2039, 3107, 3367, 3461, 3727, 3983
Eco47III AGCGCT 1 cut(s) 2164
Eco57I CTGAAG 6 cut(s) 561, 609, 1844, 2001, 2255, 2660
Eco88I CYCGRG 1 cut(s) 726
EcoNI CCTNNNNNAGG 2 cut(s) 2046, 2921
EcoO109I RGGNCCY 4 cut(s) 1850, 2039, 3107, 3628
EcoRII CCWGG 9 cut(s) 165, 303, 1448, 2000, 2549, 3109, 3556, 3859, 3898
EcoT14I CCWWGG 4 cut(s) 216, 2478, 2501, 3515
EcoT22I ATGCAT 4 cut(s) 949, 1392, 2389, 3741
EcoT38I GRGCYC 3 cut(s) 378, 1316, 3359
ErhI CCWWGG 4 cut(s) 216, 2478, 2501, 3515
FaqI GGGAC 2 cut(s) 74, 1983
FauI CCCGC 3 cut(s) 20, 36, 3482
FauNDI CATATG 1 cut(s) 1579
FbaI TGATCA 1 cut(s) 3142
FblI GTMKAC 2 cut(s) 2739, 3553
FriOI GRGCYC 3 cut(s) 378, 1316, 3359
FspBI CTAG 7 cut(s) 815, 1412, 1574, 1832, 2969, 3486, 3642
GlaI GCGC 3 cut(s) 150, 1445, 2164
GsaI CCCAGC 2 cut(s) 2655, 4013
GsuI CTGGAG 1 cut(s) 848
HaeII RGCGCY 2 cut(s) 152, 2166
HapII CCGG 4 cut(s) 24, 35, 49, 3365
HgaI GACGC 1 cut(s) 71
HhaI GCGC 3 cut(s) 151, 1446, 2165
Hin1I GRCGYC 2 cut(s) 5, 63
Hin6I GCGC 3 cut(s) 149, 1444, 2163
HinP1I GCGC 3 cut(s) 149, 1444, 2163
HincII GTYRAC 1 cut(s) 1882
HindII GTYRAC 1 cut(s) 1882
HindIII AAGCTT 2 cut(s) 1289, 1912
HpaI GTTAAC 1 cut(s) 1882
HpaII CCGG 4 cut(s) 24, 35, 49, 3365
HphI GGTGA 4 cut(s) 97, 293, 746, 3559
Hpy166II GTNNAC 5 cut(s) 1882, 2661, 2740, 3554, 3686
Hpy8I GTNNAC 5 cut(s) 1882, 2661, 2740, 3554, 3686
Hpy99I CGWCG 2 cut(s) 10, 3392
HpyAV CCTTC 6 cut(s) 536, 1162, 1841, 1984, 2042, 3369
HpyCH4IV ACGT 3 cut(s) 1281, 1745, 1996
HpyF3I CTNAG 9 cut(s) 266, 535, 547, 891, 2227, 2828, 2885, 3654, 3723
HpySE526I ACGT 3 cut(s) 1281, 1745, 1996
Hsp92I GRCGYC 2 cut(s) 5, 63
HspAI GCGC 3 cut(s) 149, 1444, 2163
KpnI GGTACC 1 cut(s) 3754
KroI GCCGGC 1 cut(s) 23
KroNI GCCGGC 1 cut(s) 25
Ksp22I TGATCA 1 cut(s) 3142
KspAI GTTAAC 1 cut(s) 1882
LguI GCTCTTC 1 cut(s) 1392
LmnI GCTCC 6 cut(s) 37, 220, 361, 2106, 2480, 2982
MabI ACCWGGT 1 cut(s) 3556
MaeI CTAG 7 cut(s) 815, 1412, 1574, 1832, 2969, 3486, 3642
MaeII ACGT 3 cut(s) 1281, 1745, 1996
MbiI CCGCTC 2 cut(s) 40, 110
MfeI CAATTG 3 cut(s) 841, 2865, 3846
MflI RGATCY 6 cut(s) 865, 1530, 1738, 1958, 3802, 4015
MhlI GDGCHC 5 cut(s) 378, 1316, 1567, 2011, 3359
MlsI TGGCCA 2 cut(s) 2319, 3114
MluNI TGGCCA 2 cut(s) 2319, 3114
MlyI GAGTC 4 cut(s) 233, 2479, 2549, 3087
MmeI TCCRAC 3 cut(s) 313, 1467, 3748
Mox20I TGGCCA 2 cut(s) 2319, 3114
Mph1103I ATGCAT 4 cut(s) 949, 1392, 2389, 3741
MroNI GCCGGC 1 cut(s) 23
MscI TGGCCA 2 cut(s) 2319, 3114
MslI CAYNNNNRTG 7 cut(s) 1560, 1582, 2846, 3162, 3744, 3759, 3927
Msp20I TGGCCA 2 cut(s) 2319, 3114
MspA1I CMGCKG 2 cut(s) 1217, 1736
MspI CCGG 4 cut(s) 24, 35, 49, 3365
MunI CAATTG 3 cut(s) 841, 2865, 3846
Mva1269I GAATGC 2 cut(s) 1879, 2389
MvaI CCWGG 9 cut(s) 167, 305, 1450, 2002, 2551, 3111, 3558, 3861, 3900
MvnI CGCG 1 cut(s) 396
NaeI GCCGGC 1 cut(s) 25
NciI CCSGG 1 cut(s) 3365
NcoI CCATGG 1 cut(s) 2478
NdeI CATATG 1 cut(s) 1579
NgoMIV GCCGGC 1 cut(s) 23
NheI GCTAGC 1 cut(s) 3485
NlaIV GGNNCC 8 cut(s) 47, 1564, 1852, 1960, 2010, 3629, 3679, 3752
NmeAIII GCCGAG 1 cut(s) 2795
NmuCI GTSAC 7 cut(s) 103, 734, 1106, 1629, 1992, 3715, 3920
NruI TCGCGA 1 cut(s) 396
NsiI ATGCAT 4 cut(s) 949, 1392, 2389, 3741
NspI RCATGY 2 cut(s) 563, 1517
OliI CACNNNNGTG 1 cut(s) 1560
PciI ACATGT 1 cut(s) 1513
PciSI GCTCTTC 1 cut(s) 1392
PctI GAATGC 2 cut(s) 1879, 2389
PdiI GCCGGC 1 cut(s) 25
PfeI GAWTC 9 cut(s) 71, 652, 929, 1373, 1429, 1730, 2438, 2962, 2988
PflMI CCANNNNNTGG 1 cut(s) 1654
PfoI TCCNGGA 1 cut(s) 165
PleI GAGTC 4 cut(s) 233, 2479, 2548, 3087
PpsI GAGTC 4 cut(s) 233, 2479, 2548, 3087
PpuMI RGGWCCY 3 cut(s) 1850, 2039, 3107
PscI ACATGT 1 cut(s) 1513
Psp5II RGGWCCY 3 cut(s) 1850, 2039, 3107
Psp6I CCWGG 9 cut(s) 165, 303, 1448, 2000, 2549, 3109, 3556, 3859, 3898
PspFI CCCAGC 2 cut(s) 2651, 4009
PspGI CCWGG 9 cut(s) 165, 303, 1448, 2000, 2549, 3109, 3556, 3859, 3898
PspN4I GGNNCC 8 cut(s) 47, 1564, 1852, 1960, 2010, 3629, 3679, 3752
PspPPI RGGWCCY 3 cut(s) 1850, 2039, 3107
PstI CTGCAG 1 cut(s) 3993
PstNI CAGNNNCTG 3 cut(s) 1654, 2210, 3326
PsuI RGATCY 6 cut(s) 865, 1530, 1738, 1958, 3802, 4015
PvuII CAGCTG 1 cut(s) 1217
RruI TCGCGA 1 cut(s) 396
RseI CAYNNNNRTG 7 cut(s) 1560, 1582, 2846, 3162, 3744, 3759, 3927
SapI GCTCTTC 1 cut(s) 1392
ScaI AGTACT 4 cut(s) 1091, 1233, 2667, 3291
SchI GAGTC 4 cut(s) 233, 2479, 2549, 3087
SduI GDGCHC 5 cut(s) 378, 1316, 1567, 2011, 3359
SexAI ACCWGGT 1 cut(s) 3556
SfcI CTRYAG 2 cut(s) 3120, 3989
SinI GGWCC 8 cut(s) 46, 1850, 2039, 3107, 3367, 3461, 3727, 3983
SmiMI CAYNNNNRTG 7 cut(s) 1560, 1582, 2846, 3162, 3744, 3759, 3927
SmlI CTYRAG 7 cut(s) 95, 1307, 1377, 1703, 2177, 2246, 2395
SmoI CTYRAG 7 cut(s) 95, 1307, 1377, 1703, 2177, 2246, 2395
SspI AATATT 2 cut(s) 759, 1018
SspMI CTAG 7 cut(s) 815, 1412, 1574, 1832, 2969, 3486, 3642
StyI CCWWGG 4 cut(s) 216, 2478, 2501, 3515
TaiI ACGT 3 cut(s) 1284, 1748, 1999
TaqI TCGA 8 cut(s) 8, 69, 297, 774, 2078, 2790, 3387, 3880
TauI GCSGC 2 cut(s) 43, 752
TfiI GAWTC 9 cut(s) 71, 652, 929, 1373, 1429, 1730, 2438, 2962, 2988
TscAI CASTG 6 cut(s) 2211, 2287, 3229, 3688, 3923, 3993
TseFI GTSAC 7 cut(s) 103, 734, 1106, 1629, 1992, 3715, 3920
Tsp45I GTSAC 7 cut(s) 103, 734, 1106, 1629, 1992, 3715, 3920
TspGWI ACGGA 3 cut(s) 232, 528, 2119
TspRI CASTG 6 cut(s) 2211, 2287, 3229, 3688, 3923, 3993
Van91I CCANNNNNTGG 1 cut(s) 1654
VpaK11BI GGWCC 8 cut(s) 46, 1850, 2039, 3107, 3367, 3461, 3727, 3983
XagI CCTNNNNNAGG 2 cut(s) 2046, 2921
XceI RCATGY 2 cut(s) 563, 1517
XcmI CCANNNNNNNNNTGG 1 cut(s) 1094
XmiI GTMKAC 2 cut(s) 2739, 3553
XspI CTAG 7 cut(s) 815, 1412, 1574, 1832, 2969, 3486, 3642
ZrmI AGTACT 4 cut(s) 1091, 1233, 2667, 3291
Zsp2I ATGCAT 4 cut(s) 949, 1392, 2389, 3741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.