Rorug05G0413800

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
57213161 .. 57217142
3982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0413800.1

Sequence Viewer

Length: 393 bp
ATGGACGGCCTCTGGCTCTCCCAACGCTACCACAACCACTCTGACATTTACGACGACAGCCGCCGTGCCAGCCCAACAATTTGTCCCGCAAAAAGACCCAGCCCCCTCAGCCCGGCAAGAAGCAGTTCATCATCGAACCCTTTCAAAGGTTTGGCCTCGATCCCGAAGCTCGCGTTTGTCACGACAAGTATATTGGGGAGCCCTTGGATCGCCGTCATCGCAGCCGTTCCTGTCAGTCTCTGTTACTGTTTCTGTGTAATTAGGCAATGGCGTGCAGGCCTACTTCTCCTACCGAGTAACCACCAAGGATCGATAATGAGAGGCCTCCTCAAGGTGGAGAACCCTCAATGCACAATGTCGATTGGAGAGTCAATTGCTGCCAGATTCACGTGA

Protein Analysis

130

Amino Acids

14.19

Weight (kDa)

9.6

Isoelectric Point (pI)

69.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 173
AciI CCGC 2 cut(s) 61, 87
AclWI GGATC 3 cut(s) 154, 215, 316
AcvI CACGTG 1 cut(s) 390
AfiI CCNNNNNNNGG 4 cut(s) 112, 146, 331, 334
AgsI TTSAA 1 cut(s) 145
AluBI AGCT 1 cut(s) 169
AluI AGCT 1 cut(s) 169
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 3 cut(s) 154, 215, 316
AlwNI CAGNNNCTG 1 cut(s) 240
AoxI GGCC 4 cut(s) 7, 153, 277, 322
ApeKI GCWGC 2 cut(s) 221, 377
Asp700I GAANNNNTTC 2 cut(s) 124, 140
AsuC2I CCSGG 1 cut(s) 113
BanII GRGCYC 1 cut(s) 203
BbrPI CACGTG 1 cut(s) 390
BbvCI CCTCAGC 1 cut(s) 107
BbvI GCAGC 2 cut(s) 233, 364
BceAI ACGGC 4 cut(s) 22, 48, 197, 209
BcnI CCSGG 1 cut(s) 113
BcoDI GTCTC 1 cut(s) 242
BisI GCNGC 3 cut(s) 61, 222, 378
BlsI GCNGC 3 cut(s) 62, 223, 379
Bme1390I CCNGG 1 cut(s) 113
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 1 cut(s) 113
BplI GAGNNNNNCTC 2 cut(s) 312, 344
Bpu10I CCTNAGC 1 cut(s) 107
BpuEI CTTGAG 1 cut(s) 314
BpuMI CCSGG 1 cut(s) 113
Bsa29I ATCGAT 1 cut(s) 311
BsaAI YACGTR 1 cut(s) 390
BsaJI CCNNGG 2 cut(s) 203, 304
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 146, 331, 334
Bse3DI GCAATG 1 cut(s) 272
BseCI ATCGAT 1 cut(s) 311
BseDI CCNNGG 2 cut(s) 203, 304
BseLI CCNNNNNNNGG 4 cut(s) 112, 146, 331, 334
BseMI GCAATG 1 cut(s) 272
BseMII CTCAG 1 cut(s) 121
BseRI GAGGAG 1 cut(s) 317
BseXI GCAGC 2 cut(s) 233, 364
BseYI CCCAGC 1 cut(s) 98
BsgI GTGCAG 1 cut(s) 294
Bsh1236I CGCG 1 cut(s) 173
BshFI GGCC 4 cut(s) 9, 155, 279, 324
BshVI ATCGAT 1 cut(s) 311
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 1 cut(s) 69
BslI CCNNNNNNNGG 4 cut(s) 112, 146, 331, 334
BsmAI GTCTC 1 cut(s) 242
BsmFI GGGAC 1 cut(s) 69
BsnI GGCC 4 cut(s) 9, 155, 279, 324
Bsp1286I GDGCHC 1 cut(s) 203
Bsp143I GATC 3 cut(s) 159, 207, 308
BspACI CCGC 2 cut(s) 61, 87
BspANI GGCC 4 cut(s) 9, 155, 279, 324
BspCNI CTCAG 1 cut(s) 120
BspDI ATCGAT 1 cut(s) 311
BspFNI CGCG 1 cut(s) 173
BspLI GGNNCC 1 cut(s) 200
BspPI GGATC 3 cut(s) 154, 215, 316
BsrDI GCAATG 1 cut(s) 272
BssECI CCNNGG 2 cut(s) 203, 304
BssMI GATC 3 cut(s) 159, 207, 308
BssT1I CCWWGG 2 cut(s) 203, 304
Bst4CI ACNGT 1 cut(s) 248
BstBAI YACGTR 1 cut(s) 390
BstC8I GCNNGC 4 cut(s) 70, 171, 273, 277
BstDEI CTNAG 1 cut(s) 107
BstENI CCTNNNNNAGG 2 cut(s) 144, 329
BstFNI CGCG 1 cut(s) 173
BstKTI GATC 3 cut(s) 162, 210, 311
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 3 cut(s) 159, 207, 308
BstMWI GCNNNNNNNGC 3 cut(s) 69, 108, 218
BstSCI CCNGG 1 cut(s) 111
BstUI CGCG 1 cut(s) 173
BstV1I GCAGC 2 cut(s) 233, 364
Bsu15I ATCGAT 1 cut(s) 311
BsuRI GGCC 4 cut(s) 9, 155, 279, 324
BsuTUI ATCGAT 1 cut(s) 311
BtgZI GCGATG 1 cut(s) 202
Cac8I GCNNGC 4 cut(s) 70, 171, 273, 277
CaiI CAGNNNCTG 1 cut(s) 240
ClaI ATCGAT 1 cut(s) 311
DdeI CTNAG 1 cut(s) 107
DpnI GATC 3 cut(s) 161, 209, 310
DpnII GATC 3 cut(s) 159, 207, 308
Eco130I CCWWGG 2 cut(s) 203, 304
Eco147I AGGCCT 2 cut(s) 279, 324
Eco24I GRGCYC 1 cut(s) 203
Eco72I CACGTG 1 cut(s) 390
EcoNI CCTNNNNNAGG 2 cut(s) 144, 329
EcoT14I CCWWGG 2 cut(s) 203, 304
EcoT38I GRGCYC 1 cut(s) 203
ErhI CCWWGG 2 cut(s) 203, 304
FaiI YATR 1 cut(s) 191
FaqI GGGAC 1 cut(s) 69
FauI CCCGC 1 cut(s) 94
Fnu4HI GCNGC 3 cut(s) 61, 222, 378
FriOI GRGCYC 1 cut(s) 203
Fsp4HI GCNGC 3 cut(s) 61, 222, 378
GluI GCNGC 3 cut(s) 61, 222, 378
GsaI CCCAGC 1 cut(s) 102
HaeIII GGCC 4 cut(s) 9, 155, 279, 324
HapII CCGG 1 cut(s) 113
HinfI GANTC 2 cut(s) 368, 384
HpaII CCGG 1 cut(s) 113
Hpy188I TCNGA 1 cut(s) 43
Hpy188III TCNNGA 2 cut(s) 163, 181
Hpy99I CGWCG 1 cut(s) 56
HpyCH4III ACNGT 1 cut(s) 248
HpyCH4IV ACGT 1 cut(s) 389
HpyCH4V TGCA 2 cut(s) 275, 351
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 108, 218
HpyF3I CTNAG 1 cut(s) 107
HpySE526I ACGT 1 cut(s) 389
Kzo9I GATC 3 cut(s) 159, 207, 308
LmnI GCTCC 1 cut(s) 198
LpnPI CCDG 5 cut(s) 82, 112, 126, 243, 261
Lsp1109I GCAGC 2 cut(s) 233, 364
MaeII ACGT 1 cut(s) 389
MaeIII GTNAC 3 cut(s) 178, 242, 296
MalI GATC 3 cut(s) 161, 209, 310
MboI GATC 3 cut(s) 159, 207, 308
MfeI CAATTG 1 cut(s) 372
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 3 cut(s) 78, 258, 372
MlyI GAGTC 1 cut(s) 377
MnlI CCTC 7 cut(s) 20, 116, 166, 314, 335, 338, 354
MroXI GAANNNNTTC 2 cut(s) 124, 140
MspI CCGG 1 cut(s) 113
MspR9I CCNGG 1 cut(s) 113
MunI CAATTG 1 cut(s) 372
MvnI CGCG 1 cut(s) 173
MwoI GCNNNNNNNGC 3 cut(s) 69, 108, 218
NciI CCSGG 1 cut(s) 113
NdeII GATC 3 cut(s) 159, 207, 308
NlaIV GGNNCC 1 cut(s) 200
NmuCI GTSAC 1 cut(s) 178
PceI AGGCCT 2 cut(s) 279, 324
PdmI GAANNNNTTC 2 cut(s) 124, 140
PfeI GAWTC 1 cut(s) 384
PkrI GCNGC 3 cut(s) 62, 223, 379
PleI GAGTC 1 cut(s) 376
PmaCI CACGTG 1 cut(s) 390
PmlI CACGTG 1 cut(s) 390
PpsI GAGTC 1 cut(s) 376
Ppu21I YACGTR 1 cut(s) 390
PspCI CACGTG 1 cut(s) 390
PspFI CCCAGC 1 cut(s) 98
PspN4I GGNNCC 1 cut(s) 200
PstNI CAGNNNCTG 1 cut(s) 240
SatI GCNGC 3 cut(s) 61, 222, 378
Sau3AI GATC 3 cut(s) 159, 207, 308
SchI GAGTC 1 cut(s) 377
ScrFI CCNGG 1 cut(s) 113
SduI GDGCHC 1 cut(s) 203
SetI ASST 4 cut(s) 151, 171, 336, 392
SmlI CTYRAG 1 cut(s) 329
SmoI CTYRAG 1 cut(s) 329
Sse9I AATT 3 cut(s) 78, 258, 372
SseBI AGGCCT 2 cut(s) 279, 324
SsiI CCGC 2 cut(s) 61, 87
StuI AGGCCT 2 cut(s) 279, 324
StyD4I CCNGG 1 cut(s) 111
StyI CCWWGG 2 cut(s) 203, 304
TaaI ACNGT 1 cut(s) 248
TaiI ACGT 1 cut(s) 392
TaqI TCGA 4 cut(s) 134, 158, 311, 359
TasI AATT 3 cut(s) 78, 258, 372
TauI GCSGC 1 cut(s) 63
TfiI GAWTC 1 cut(s) 384
TseFI GTSAC 1 cut(s) 178
TseI GCWGC 2 cut(s) 221, 377
Tsp45I GTSAC 1 cut(s) 178
TspDTI ATGAA 1 cut(s) 117
XagI CCTNNNNNAGG 2 cut(s) 144, 329
XmnI GAANNNNTTC 2 cut(s) 124, 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.