pycom15g25370

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
19802764 .. 19803373
610 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g25370.2

Sequence Viewer

Length: 486 bp
ATGAATTGCATATCCAAGCTGTGCGAATCCCCTCTCAAACAAGTCATAATAACAGCGGGTACTGATACATCAGCAGTGACACTAGAATGGGCCATGTCCAATCTCCTCAACCATCCCCTCGTGTTAAAGAAAGCTAGAGCTGAAGTTGATGCTCAACTTGGAAATGAACGCTTGGTGGACGAACCAGATATCTCTAAACTACCCTATTTGCAAAGTATCATATCCGAGACCCTCCGATTATACCCCGCAGCTCCATTACTACTACCACATTTTTCATCAAATGGCTACATGATTGAGAGATTCGACGTGCCATGTGATACAATGGTATTAATCAATGCATGGGCCATCTATAGAGACCCAATGTTCTGGGATGATCCTGCAAGCTTCAAACCCGAGAGATTTAAAAGTGGTGAGGACTTGTCACATGACCTGATGTCGTTCGGACTGGGAAGAAGTATTGAGAAATCTAAACCAGTCACAAGTTAG

Protein Analysis

162

Amino Acids

18.07

Weight (kDa)

5.17

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 56, 246
AclWI GGATC 1 cut(s) 368
AcuI CTGAAG 1 cut(s) 162
AfaI GTAC 1 cut(s) 61
AgsI TTSAA 1 cut(s) 388
AhdI GACNNNNNGTC 1 cut(s) 433
AjiI CACGTC 1 cut(s) 307
AluBI AGCT 5 cut(s) 19, 134, 140, 251, 384
AluI AGCT 5 cut(s) 19, 134, 140, 251, 384
Alw26I GTCTC 2 cut(s) 221, 348
AlwI GGATC 1 cut(s) 368
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 2 cut(s) 90, 342
ApeKI GCWGC 1 cut(s) 248
AseI ATTAAT 1 cut(s) 329
AspS9I GGNCC 2 cut(s) 90, 342
AsuHPI GGTGA 1 cut(s) 422
AvaI CYCGRG 1 cut(s) 392
BaeI ACNNNNGTAYC 2 cut(s) 309, 342
BauI CACGAG 1 cut(s) 119
BbvI GCAGC 1 cut(s) 260
BccI CCATC 2 cut(s) 120, 353
BcoDI GTCTC 2 cut(s) 221, 348
BfaI CTAG 2 cut(s) 83, 135
BfmI CTRYAG 1 cut(s) 349
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
BmeRI GACNNNNNGTC 1 cut(s) 433
BmeT110I CYCGRG 1 cut(s) 392
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 2 cut(s) 90, 342
BmrI ACTGGG 1 cut(s) 455
BmsI GCATC 1 cut(s) 139
BmuI ACTGGG 1 cut(s) 455
BsaI GGTCTC 2 cut(s) 221, 348
Bse1I ACTGG 2 cut(s) 450, 473
BseGI GGATG 2 cut(s) 112, 376
BseNI ACTGG 2 cut(s) 450, 473
BseRI GAGGAG 1 cut(s) 95
BseXI GCAGC 1 cut(s) 260
BshFI GGCC 2 cut(s) 92, 344
BsiHKCI CYCGRG 1 cut(s) 392
BsmAI GTCTC 2 cut(s) 221, 348
BsnI GGCC 2 cut(s) 92, 344
Bso31I GGTCTC 2 cut(s) 221, 348
BsoBI CYCGRG 1 cut(s) 392
Bsp143I GATC 1 cut(s) 373
BspACI CCGC 2 cut(s) 56, 246
BspANI GGCC 2 cut(s) 92, 344
BspPI GGATC 1 cut(s) 368
BspTNI GGTCTC 2 cut(s) 221, 348
BsrI ACTGG 2 cut(s) 450, 473
BssMI GATC 1 cut(s) 373
BssSI CACGAG 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 119
BstC8I GCNNGC 1 cut(s) 382
BstF5I GGATG 2 cut(s) 112, 376
BstKTI GATC 1 cut(s) 376
BstMAI GTCTC 2 cut(s) 221, 348
BstMBI GATC 1 cut(s) 373
BstSFI CTRYAG 1 cut(s) 349
BstV1I GCAGC 1 cut(s) 260
BstXI CCANNNNNNTGG 1 cut(s) 366
BsuRI GGCC 2 cut(s) 92, 344
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 2 cut(s) 112, 376
BtsI GCAGTG 1 cut(s) 81
BtsIMutI CAGTG 1 cut(s) 81
Cac8I GCNNGC 1 cut(s) 382
Cfr13I GGNCC 2 cut(s) 90, 342
Csp6I GTAC 1 cut(s) 60
CviAII CATG 5 cut(s) 94, 289, 312, 339, 425
CviJI RGCY 8 cut(s) 19, 92, 134, 140, 251, 285, 344, 384
CviKI_1 RGCY 8 cut(s) 19, 92, 134, 140, 251, 285, 344, 384
CviQI GTAC 1 cut(s) 60
DpnI GATC 1 cut(s) 375
DpnII GATC 1 cut(s) 373
DraI TTTAAA 1 cut(s) 403
DriI GACNNNNNGTC 1 cut(s) 433
Eam1105I GACNNNNNGTC 1 cut(s) 433
Eco31I GGTCTC 2 cut(s) 221, 348
Eco32I GATATC 1 cut(s) 190
Eco57I CTGAAG 1 cut(s) 162
Eco88I CYCGRG 1 cut(s) 392
EcoRV GATATC 1 cut(s) 190
EcoT22I ATGCAT 1 cut(s) 340
FaeI CATG 5 cut(s) 97, 292, 315, 342, 428
FatI CATG 5 cut(s) 93, 288, 311, 338, 424
FauI CCCGC 2 cut(s) 49, 253
Fnu4HI GCNGC 1 cut(s) 249
FokI GGATG 2 cut(s) 99, 383
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 2 cut(s) 83, 135
GluI GCNGC 1 cut(s) 249
HaeIII GGCC 2 cut(s) 92, 344
Hin1II CATG 5 cut(s) 97, 292, 315, 342, 428
HindIII AAGCTT 1 cut(s) 382
HinfI GANTC 2 cut(s) 26, 300
HphI GGTGA 1 cut(s) 422
Hpy166II GTNNAC 1 cut(s) 178
Hpy188I TCNGA 3 cut(s) 226, 236, 443
Hpy8I GTNNAC 1 cut(s) 178
Hpy99I CGWCG 1 cut(s) 308
HpyCH4IV ACGT 1 cut(s) 306
HpyCH4V TGCA 4 cut(s) 9, 211, 338, 380
HpySE526I ACGT 1 cut(s) 306
Hsp92II CATG 5 cut(s) 97, 292, 315, 342, 428
Kzo9I GATC 1 cut(s) 373
LmnI GCTCC 1 cut(s) 256
LpnPI CCDG 5 cut(s) 198, 352, 390, 431, 443
Lsp1109I GCAGC 1 cut(s) 260
LweI GCATC 1 cut(s) 139
MaeI CTAG 2 cut(s) 83, 135
MaeII ACGT 1 cut(s) 306
MaeIII GTNAC 3 cut(s) 76, 420, 475
MalI GATC 1 cut(s) 375
MboI GATC 1 cut(s) 373
MboII GAAGA 1 cut(s) 462
MluCI AATT 1 cut(s) 4
MnlI CCTC 5 cut(s) 42, 116, 128, 242, 406
Mph1103I ATGCAT 1 cut(s) 340
MseI TTAA 3 cut(s) 125, 329, 402
MslI CAYNNNNRTG 1 cut(s) 85
MspA1I CMGCKG 1 cut(s) 56
NdeII GATC 1 cut(s) 373
NlaIII CATG 5 cut(s) 97, 292, 315, 342, 428
NmuCI GTSAC 3 cut(s) 76, 420, 475
NsiI ATGCAT 1 cut(s) 340
PfeI GAWTC 2 cut(s) 26, 300
PkrI GCNGC 1 cut(s) 250
PshBI ATTAAT 1 cut(s) 329
PspPI GGNCC 2 cut(s) 90, 342
RsaI GTAC 1 cut(s) 61
RsaNI GTAC 1 cut(s) 60
RseI CAYNNNNRTG 1 cut(s) 85
SaqAI TTAA 3 cut(s) 125, 329, 402
SatI GCNGC 1 cut(s) 249
Sau3AI GATC 1 cut(s) 373
Sau96I GGNCC 2 cut(s) 90, 342
SetI ASST 7 cut(s) 21, 136, 142, 253, 309, 386, 432
SfaNI GCATC 1 cut(s) 139
SfcI CTRYAG 1 cut(s) 349
SmiMI CAYNNNNRTG 1 cut(s) 85
Sse9I AATT 1 cut(s) 4
SsiI CCGC 2 cut(s) 56, 246
SspMI CTAG 2 cut(s) 83, 135
TaiI ACGT 1 cut(s) 309
TaqI TCGA 1 cut(s) 303
TasI AATT 1 cut(s) 4
TfiI GAWTC 2 cut(s) 26, 300
Tru1I TTAA 3 cut(s) 125, 329, 402
Tru9I TTAA 3 cut(s) 125, 329, 402
TscAI CASTG 1 cut(s) 81
TseFI GTSAC 3 cut(s) 76, 420, 475
TseI GCWGC 1 cut(s) 248
Tsp45I GTSAC 3 cut(s) 76, 420, 475
TspDTI ATGAA 3 cut(s) 17, 180, 264
TspRI CASTG 1 cut(s) 81
VspI ATTAAT 1 cut(s) 329
XspI CTAG 2 cut(s) 83, 135
Zsp2I ATGCAT 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.