Rroxscaffold_2G00124320

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000218
Physical Location & Seq
Forward (+)
58554353 .. 58556255
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00124320.1

Sequence Viewer

Length: 1512 bp
ATGGAAGACATCTTCTTCTACACTTCTCTCTCCATCATCGTTTGCCTGCTGATCACTCTAAAGCTGTTTCAACGGCGACGTTACCCTAACCTCCCTCCAAGTCCTTCCTTATCTCTTCCGATTCTCAATCACCTCCACCTTCTCAAATCCCCGGTCCACCGCACCTTCCACCGCCTCGCTCAGAAACACGGCCCCATCTTCTCCCTCTGGTTCGGCTCCCGCCGCGTGGTCATTATCTCCTCCTCCTCGGCCGTGCAAGAATGCTTCACCAAAAATGACATCGTGTTGGCAAACCGTCCCCCCACGCTCCTGAGTAAGCACTTTGCGTACAACAGCACCACCATTACGACCTCCCCCTACGGCGATCAATGGCGAAACGTTCGGCGTATCGGCGCTGTCGAGGTCTTGTCCACCAGCCGGCTCAACTCTTTCTCAGATGTCAGAAAAGAAGAAGTCAAGCACTTGCTGCGCAAGCTTTTTCTAAACGCAGAAGAAGAAGAAGGTTGTTTTGTGAAAGTGGAGCTGAGGTCTATGTTACATGAGCTGACCTTCAACAACATAATGACAATGATGGCAGGGAAGAGGTATGTCGGGGACCATGTTGCGAACAAGAAAGAGGGGAAGGAGTTCTTTGAGATCATGGATGAGGCGTTATCGTACAGCCTGGGAACCAACCCCGGAGAATTCATGCCCTTTTTCAGATGGTTTGGTGGTAATGGTTATGAGAGGAAGGTGAAGAAGTTGGGTAAGAGAGCAGATATGTTCTTGCAACGTCTGATTGATGAGCACAGGAACAAGACTGCTTCAGAGAGTAAAAATACCTTGATCGACAACATGCTTTCTCAGCAGGGGTCAGAACCTGAATATTACACAGATGAGATTATCAAAGGACTTATACTGAATCTATTATTGGCTGGCACTGATACATCAGCAGTGACATTAGAATGGGCCATGTCTGGTTTGCTAAACCATCCGGATACGTTAGATAAGGTTAGAGCTGAACTGGATGCTCAACTTGGTCAAGAACGCTTAGTAGACGAACAAGACATTTCTAAGCTTCCCTACCTACAAAGTATTATCTCCGAGACTCTTCGATTGTATCCAGCGGCACCAATGCTATTACCACATTTTGCATCAGATGATTGCGTTGTAGGTGGATTTGATATACCACGTGACACATTGATATTGGTCAATGCATGGGCCATACATAGAGACCCGAAGTTGTGGGATGATCCAGAAAGCTTCAAACCTGAGAGGTTTGAAATCGGCAGTAAGGACGAGGCACACAAATATATGCCATTTGGAATGGGAAGAAGGGCATGCCCCGGAGTAGGATTGGCCCAACGTGAGGTAGGCTTGACTTTGGCTTCATTGATTCAATGCTTTGAGTGGAAAAGGATCAGTAAGGAGGAGGTTGATATGACTGAAGGGACAGGACTCACCATGCCTAAACTAGTGCCATTGGAGGCCATGTACAAACCATGCTCCTTTTTTAACAAGGTTTTCCATTGA

Protein Analysis

503

Amino Acids

57.47

Weight (kDa)

7.25

Isoelectric Point (pI)

46.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 484 3.7e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 470
AccB1I GGYRCC 1 cut(s) 1108
AccI GTMKAC 1 cut(s) 1035
AccII CGCG 1 cut(s) 225
AccIII TCCGGA 1 cut(s) 973
AciI CCGC 5 cut(s) 160, 172, 220, 223, 1106
AclI AACGTT 1 cut(s) 378
AclWI GGATC 2 cut(s) 1226, 1406
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 1 cut(s) 683
AcuI CTGAAG 2 cut(s) 789, 1446
AcvI CACGTG 1 cut(s) 1172
AfaI GTAC 3 cut(s) 329, 659, 1475
AfiI CCNNNNNNNGG 4 cut(s) 226, 417, 1331, 1348
AgsI TTSAA 5 cut(s) 71, 553, 1246, 1262, 1379
AhlI ACTAGT 1 cut(s) 1453
AjnI CCWGG 1 cut(s) 663
AjuI GAANNNNNNNTTGG 2 cut(s) 893, 925
AluBI AGCT 7 cut(s) 64, 475, 523, 544, 998, 1057, 1242
AluI AGCT 7 cut(s) 64, 475, 523, 544, 998, 1057, 1242
Alw21I GWGCWC 1 cut(s) 789
Alw26I GTCTC 2 cut(s) 1079, 1206
AlwI GGATC 2 cut(s) 1226, 1406
AlwNI CAGNNNCTG 1 cut(s) 860
Aor13HI TCCGGA 1 cut(s) 973
AoxI GGCC 6 cut(s) 190, 249, 948, 1200, 1338, 1467
ApeKI GCWGC 1 cut(s) 466
ApoI RAATTY 1 cut(s) 683
ArsI GACNNNNNNTTYG 2 cut(s) 138, 170
Asp700I GAANNNNTTC 1 cut(s) 626
AspLEI GCGC 2 cut(s) 395, 471
AspS9I GGNCC 6 cut(s) 154, 191, 595, 948, 1200, 1339
AsuC2I CCSGG 3 cut(s) 152, 678, 1326
AsuHPI GGTGA 4 cut(s) 122, 259, 745, 1432
AvaII GGWCC 2 cut(s) 154, 595
BanI GGYRCC 1 cut(s) 1108
BbrPI CACGTG 1 cut(s) 1172
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 1 cut(s) 789
BbvCI CCTCAGC 1 cut(s) 524
BbvI GCAGC 1 cut(s) 453
BccI CCATC 5 cut(s) 41, 203, 565, 696, 978
BceAI ACGGC 4 cut(s) 89, 205, 236, 376
BciT130I CCWGG 1 cut(s) 665
BciVI GTATCC 2 cut(s) 970, 1110
BclI TGATCA 1 cut(s) 51
BcnI CCSGG 3 cut(s) 152, 678, 1326
BcoDI GTCTC 2 cut(s) 1079, 1206
BcuI ACTAGT 1 cut(s) 1453
BfaI CTAG 1 cut(s) 1454
BfoI RGCGCY 1 cut(s) 396
BfuI GTATCC 2 cut(s) 970, 1110
BisI GCNGC 3 cut(s) 223, 467, 1107
BlsI GCNGC 3 cut(s) 224, 468, 1108
Bme1390I CCNGG 4 cut(s) 152, 665, 678, 1326
Bme18I GGWCC 2 cut(s) 154, 595
BmgT120I GGNCC 6 cut(s) 154, 191, 595, 948, 1200, 1339
BmiI GGNNCC 5 cut(s) 193, 217, 596, 670, 1110
BmrFI CCNGG 4 cut(s) 152, 665, 678, 1326
BmsI GCATC 2 cut(s) 997, 1142
BpiI GAAGAC 1 cut(s) 12
Bpu10I CCTNAGC 1 cut(s) 524
BpuMI CCSGG 3 cut(s) 152, 678, 1326
BsaAI YACGTR 1 cut(s) 1172
BsaI GGTCTC 1 cut(s) 1206
BsaJI CCNNGG 5 cut(s) 150, 246, 664, 676, 1324
BsaWI WCCGGW 1 cut(s) 973
BsaXI ACNNNNNCTCC 4 cut(s) 512, 542, 1457, 1487
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 417, 1331, 1348
Bse118I RCCGGY 1 cut(s) 417
Bse1I ACTGG 1 cut(s) 1008
BseAI TCCGGA 1 cut(s) 973
BseBI CCWGG 1 cut(s) 665
BseDI CCNNGG 5 cut(s) 150, 246, 664, 676, 1324
BseGI GGATG 4 cut(s) 649, 970, 1012, 1234
BseLI CCNNNNNNNGG 4 cut(s) 226, 417, 1331, 1348
BseMII CTCAG 6 cut(s) 194, 302, 447, 515, 857, 1242
BseNI ACTGG 1 cut(s) 1008
BseRI GAGGAG 4 cut(s) 229, 232, 235, 1424
BseX3I CGGCCG 1 cut(s) 249
BseXI GCAGC 1 cut(s) 453
Bsh1236I CGCG 1 cut(s) 225
Bsh1285I CGRYCG 1 cut(s) 252
BshFI GGCC 6 cut(s) 192, 251, 950, 1202, 1340, 1469
BshNI GGYRCC 1 cut(s) 1108
BsiEI CGRYCG 1 cut(s) 252
BsiHKAI GWGCWC 1 cut(s) 789
BsiSI CCGG 5 cut(s) 152, 418, 678, 974, 1326
BslFI GGGAC 3 cut(s) 282, 608, 1444
BslI CCNNNNNNNGG 4 cut(s) 226, 417, 1331, 1348
BsmAI GTCTC 2 cut(s) 1079, 1206
BsmFI GGGAC 3 cut(s) 282, 608, 1444
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 6 cut(s) 192, 251, 950, 1202, 1340, 1469
Bso31I GGTCTC 1 cut(s) 1206
Bsp1286I GDGCHC 1 cut(s) 789
Bsp13I TCCGGA 1 cut(s) 973
Bsp1407I TGTACA 1 cut(s) 1473
Bsp143I GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
BspACI CCGC 5 cut(s) 160, 172, 220, 223, 1106
BspANI GGCC 6 cut(s) 192, 251, 950, 1202, 1340, 1469
BspCNI CTCAG 6 cut(s) 193, 303, 446, 516, 856, 1243
BspEI TCCGGA 1 cut(s) 973
BspFNI CGCG 1 cut(s) 225
BspLI GGNNCC 5 cut(s) 193, 217, 596, 670, 1110
BspPI GGATC 2 cut(s) 1226, 1406
BspT107I GGYRCC 1 cut(s) 1108
BspTNI GGTCTC 1 cut(s) 1206
BsrFI RCCGGY 1 cut(s) 417
BsrGI TGTACA 1 cut(s) 1473
BsrI ACTGG 1 cut(s) 1008
BssAI RCCGGY 1 cut(s) 417
BssECI CCNNGG 5 cut(s) 150, 246, 664, 676, 1324
BssMI GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
Bst2UI CCWGG 1 cut(s) 665
Bst4CI ACNGT 1 cut(s) 296
Bst6I CTCTTC 3 cut(s) 120, 575, 1095
BstAPI GCANNNNNTGC 1 cut(s) 466
BstAUI TGTACA 1 cut(s) 1473
BstBAI YACGTR 1 cut(s) 1172
BstC8I GCNNGC 5 cut(s) 47, 419, 473, 916, 1321
BstDEI CTNAG 8 cut(s) 180, 311, 433, 524, 843, 1030, 1053, 1251
BstF5I GGATG 4 cut(s) 649, 970, 1012, 1234
BstFNI CGCG 1 cut(s) 225
BstH2I RGCGCY 1 cut(s) 396
BstHHI GCGC 2 cut(s) 395, 471
BstKTI GATC 6 cut(s) 54, 367, 639, 828, 1234, 1401
BstMAI GTCTC 2 cut(s) 1079, 1206
BstMBI GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
BstMCI CGRYCG 1 cut(s) 252
BstMWI GCNNNNNNNGC 4 cut(s) 222, 466, 472, 844
BstNI CCWGG 1 cut(s) 665
BstNSI RCATGY 2 cut(s) 838, 1323
BstSCI CCNGG 4 cut(s) 150, 663, 676, 1324
BstUI CGCG 1 cut(s) 225
BstV1I GCAGC 1 cut(s) 453
BstV2I GAAGAC 1 cut(s) 12
BstZI CGGCCG 1 cut(s) 249
BsuI GTATCC 2 cut(s) 970, 1110
BsuRI GGCC 6 cut(s) 192, 251, 950, 1202, 1340, 1469
BtsCI GGATG 4 cut(s) 649, 970, 1012, 1234
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 2 cut(s) 918, 939
Cac8I GCNNGC 5 cut(s) 47, 419, 473, 916, 1321
CaiI CAGNNNCTG 1 cut(s) 860
CfoI GCGC 2 cut(s) 395, 471
Cfr10I RCCGGY 1 cut(s) 417
Cfr13I GGNCC 6 cut(s) 154, 191, 595, 948, 1200, 1339
Csp6I GTAC 3 cut(s) 328, 658, 1474
CviQI GTAC 3 cut(s) 328, 658, 1474
DdeI CTNAG 8 cut(s) 180, 311, 433, 524, 843, 1030, 1053, 1251
DpnI GATC 6 cut(s) 53, 366, 638, 827, 1233, 1400
DpnII GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
EaeI YGGCCR 1 cut(s) 249
EagI CGGCCG 1 cut(s) 249
Eam1104I CTCTTC 3 cut(s) 120, 575, 1095
EarI CTCTTC 3 cut(s) 120, 575, 1095
EclXI CGGCCG 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 1206
Eco47I GGWCC 2 cut(s) 154, 595
Eco52I CGGCCG 1 cut(s) 249
Eco57I CTGAAG 2 cut(s) 789, 1446
Eco72I CACGTG 1 cut(s) 1172
EcoRI GAATTC 1 cut(s) 683
EcoRII CCWGG 1 cut(s) 663
EcoT22I ATGCAT 1 cut(s) 1198
FalI AAGNNNNNCTT 2 cut(s) 614, 646
FaqI GGGAC 3 cut(s) 282, 608, 1444
FauI CCCGC 1 cut(s) 227
FbaI TGATCA 1 cut(s) 51
FblI GTMKAC 1 cut(s) 1035
Fnu4HI GCNGC 3 cut(s) 223, 467, 1107
FokI GGATG 4 cut(s) 656, 957, 1019, 1241
Fsp4HI GCNGC 3 cut(s) 223, 467, 1107
FspBI CTAG 1 cut(s) 1454
FspI TGCGCA 1 cut(s) 470
GlaI GCGC 2 cut(s) 394, 470
GluI GCNGC 3 cut(s) 223, 467, 1107
HaeII RGCGCY 1 cut(s) 396
HaeIII GGCC 6 cut(s) 192, 251, 950, 1202, 1340, 1469
HapII CCGG 5 cut(s) 152, 418, 678, 974, 1326
HhaI GCGC 2 cut(s) 395, 471
Hin6I GCGC 2 cut(s) 393, 469
HinP1I GCGC 2 cut(s) 393, 469
HindIII AAGCTT 3 cut(s) 473, 1055, 1240
HinfI GANTC 5 cut(s) 121, 901, 1087, 1375, 1437
HpaII CCGG 5 cut(s) 152, 418, 678, 974, 1326
HphI GGTGA 4 cut(s) 122, 259, 745, 1432
Hpy166II GTNNAC 3 cut(s) 157, 411, 1036
Hpy188III TCNNGA 4 cut(s) 310, 974, 1022, 1235
Hpy8I GTNNAC 3 cut(s) 157, 411, 1036
Hpy99I CGWCG 1 cut(s) 81
HpyAV CCTTC 9 cut(s) 114, 149, 175, 494, 559, 616, 724, 1308, 1421
HpyCH4III ACNGT 1 cut(s) 296
HpyCH4IV ACGT 6 cut(s) 79, 378, 772, 980, 1171, 1345
HpyCH4V TGCA 4 cut(s) 256, 769, 1133, 1196
HpyF10VI GCNNNNNNNGC 4 cut(s) 222, 466, 472, 844
HpyF3I CTNAG 8 cut(s) 180, 311, 433, 524, 843, 1030, 1053, 1251
HpySE526I ACGT 6 cut(s) 79, 378, 772, 980, 1171, 1345
HspAI GCGC 2 cut(s) 393, 469
Kpn2I TCCGGA 1 cut(s) 973
KroI GCCGGC 1 cut(s) 417
KroNI GCCGGC 1 cut(s) 419
Ksp22I TGATCA 1 cut(s) 51
Kzo9I GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
LmnI GCTCC 4 cut(s) 221, 312, 520, 1490
Lsp1109I GCAGC 1 cut(s) 453
LweI GCATC 2 cut(s) 997, 1142
MaeI CTAG 1 cut(s) 1454
MaeII ACGT 6 cut(s) 79, 378, 772, 980, 1171, 1345
MaeIII GTNAC 4 cut(s) 80, 534, 934, 1172
MalI GATC 6 cut(s) 53, 366, 638, 827, 1233, 1400
MboI GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
MhlI GDGCHC 1 cut(s) 789
MluCI AATT 1 cut(s) 683
MlyI GAGTC 2 cut(s) 1081, 1431
Mph1103I ATGCAT 1 cut(s) 1198
MroI TCCGGA 1 cut(s) 973
MroNI GCCGGC 1 cut(s) 417
MroXI GAANNNNTTC 1 cut(s) 626
MseI TTAA 1 cut(s) 1494
MslI CAYNNNNRTG 1 cut(s) 943
MspA1I CMGCKG 1 cut(s) 1106
MspI CCGG 5 cut(s) 152, 418, 678, 974, 1326
MspR9I CCNGG 4 cut(s) 152, 665, 678, 1326
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 1 cut(s) 665
MvnI CGCG 1 cut(s) 225
MwoI GCNNNNNNNGC 4 cut(s) 222, 466, 472, 844
NaeI GCCGGC 1 cut(s) 419
NciI CCSGG 3 cut(s) 152, 678, 1326
NdeII GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
NgoMIV GCCGGC 1 cut(s) 417
NlaIV GGNNCC 5 cut(s) 193, 217, 596, 670, 1110
NmeAIII GCCGAG 1 cut(s) 227
NmuCI GTSAC 2 cut(s) 934, 1172
NsbI TGCGCA 1 cut(s) 470
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 2 cut(s) 838, 1323
PaeI GCATGC 1 cut(s) 1323
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PctI GAATGC 1 cut(s) 266
PdiI GCCGGC 1 cut(s) 419
PdmI GAANNNNTTC 1 cut(s) 626
PfeI GAWTC 3 cut(s) 121, 901, 1375
PkrI GCNGC 3 cut(s) 224, 468, 1108
PleI GAGTC 2 cut(s) 1081, 1431
PmaCI CACGTG 1 cut(s) 1172
PmlI CACGTG 1 cut(s) 1172
PpsI GAGTC 2 cut(s) 1081, 1431
Ppu21I YACGTR 1 cut(s) 1172
Psp1406I AACGTT 1 cut(s) 378
Psp6I CCWGG 1 cut(s) 663
PspCI CACGTG 1 cut(s) 1172
PspGI CCWGG 1 cut(s) 663
PspN4I GGNNCC 5 cut(s) 193, 217, 596, 670, 1110
PspPI GGNCC 6 cut(s) 154, 191, 595, 948, 1200, 1339
PstNI CAGNNNCTG 1 cut(s) 860
RsaI GTAC 3 cut(s) 329, 659, 1475
RsaNI GTAC 3 cut(s) 328, 658, 1474
RseI CAYNNNNRTG 1 cut(s) 943
SaqAI TTAA 1 cut(s) 1494
SatI GCNGC 3 cut(s) 223, 467, 1107
Sau3AI GATC 6 cut(s) 51, 364, 636, 825, 1231, 1398
Sau96I GGNCC 6 cut(s) 154, 191, 595, 948, 1200, 1339
SchI GAGTC 2 cut(s) 1081, 1431
ScrFI CCNGG 4 cut(s) 152, 665, 678, 1326
SduI GDGCHC 1 cut(s) 789
SfaNI GCATC 2 cut(s) 997, 1142
SinI GGWCC 2 cut(s) 154, 595
SmiMI CAYNNNNRTG 1 cut(s) 943
SpeI ACTAGT 1 cut(s) 1453
SphI GCATGC 1 cut(s) 1323
Sse9I AATT 1 cut(s) 683
SsiI CCGC 5 cut(s) 160, 172, 220, 223, 1106
SspI AATATT 1 cut(s) 866
SspMI CTAG 1 cut(s) 1454
StyD4I CCNGG 4 cut(s) 150, 663, 676, 1324
TaaI ACNGT 1 cut(s) 296
TaiI ACGT 6 cut(s) 82, 381, 775, 983, 1174, 1348
TaqI TCGA 3 cut(s) 399, 828, 1093
TasI AATT 1 cut(s) 683
TatI WGTACW 1 cut(s) 1473
TauI GCSGC 2 cut(s) 225, 1109
TfiI GAWTC 3 cut(s) 121, 901, 1375
Tru1I TTAA 1 cut(s) 1494
Tru9I TTAA 1 cut(s) 1494
TscAI CASTG 2 cut(s) 925, 939
TseFI GTSAC 2 cut(s) 934, 1172
TseI GCWGC 1 cut(s) 466
Tsp45I GTSAC 2 cut(s) 934, 1172
TspDTI ATGAA 2 cut(s) 676, 1359
TspRI CASTG 2 cut(s) 925, 939
VpaK11BI GGWCC 2 cut(s) 154, 595
XapI RAATTY 1 cut(s) 683
XceI RCATGY 2 cut(s) 838, 1323
XmiI GTMKAC 1 cut(s) 1035
XmnI GAANNNNTTC 1 cut(s) 626
XspI CTAG 1 cut(s) 1454
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.