Rorug02G0139100

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
12249820 .. 12251213
1394 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0139100.1

Sequence Viewer

Length: 777 bp
ATGGACTCGTGCAGTTTCGACAACGTCAAGGCGGAGAAAGCCAGCGCCATGCGGAGGTACAACCGTCTCCGCACCATCGCCAGGCTTTTCCGCCTCACCGAGCTCTGCGTCGCCGCCGTCTTGCTCTCCTGGACCTTCACTCGCCTCCCCTTCGCCCTCCGCATCTCCCTCGACTACCTCCGCCTCTTCTCCGGCGTCGTTTCGAGCCCTCTCTTCGTCTTCCTCGTCTGCAACGCCATCATCGTCTCTCTCTTCGCCAAGTCCCGCAACGTCACCGCCTCCGCCTCGCCTCAGGATCCGAAGGACGATGTGGAGACTCAGCTTTACGATGAGTTCACCAACAACTGCGGCGGAAAGATGTCGAACTCCGGTAACGACGTCGTCTCCAGTGTGAAAGAGGAGGTTGTGTATCAGGACAAGCAGATCATCTCCGAGGTGAACGCCACCGATCCGAAACCTGAAACCGACCCGAACTCCGGCACTGGGTCAGACGCGGACTCGGACTCGGATTCGGTTTTGGAGTTTCCGAAAGCTATCCGGAGGACGAAGTCGGAGAAGTTCGAGAGAGTTGTTCCGGCGAAGCTAAAAAGGTCGGACACCGAGGATTGCCGGAAAATGCTGAGGTCCGGCGAGGAAACTGTGCCGGAAGATTTCGATCCAGAGGACGACTTGAGCAACGAGGAGTTTCAGCGCGCCATTGAAGCTTTCATTGAGAAGCAGAAGAGGTTTCGTCATCAGGAAGAGTCTCTGGCCATTGTGCTTCAAAACCAGAGCTGA

Protein Analysis

258

Amino Acids

29.13

Weight (kDa)

4.99

Isoelectric Point (pI)

61.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 381
AccII CGCG 2 cut(s) 494, 693
AccIII TCCGGA 1 cut(s) 537
AclWI GGATC 4 cut(s) 290, 303, 443, 650
AcoI YGGCCR 1 cut(s) 750
AcyI GRCGYC 2 cut(s) 195, 378
AfaI GTAC 1 cut(s) 59
AfiI CCNNNNNNNGG 4 cut(s) 54, 81, 476, 483
AgsI TTSAA 2 cut(s) 701, 764
AjnI CCWGG 2 cut(s) 80, 128
AluBI AGCT 6 cut(s) 103, 322, 533, 583, 704, 774
AluI AGCT 6 cut(s) 103, 322, 533, 583, 704, 774
Alw21I GWGCWC 1 cut(s) 105
Alw26I GTCTC 5 cut(s) 71, 250, 308, 388, 750
AlwI GGATC 4 cut(s) 290, 303, 443, 650
Aor13HI TCCGGA 1 cut(s) 537
AoxI GGCC 1 cut(s) 750
AspLEI GCGC 3 cut(s) 47, 693, 695
AspS9I GGNCC 2 cut(s) 132, 624
AsuHPI GGTGA 4 cut(s) 88, 265, 328, 448
AvaII GGWCC 2 cut(s) 132, 624
AxyI CCTNAGG 1 cut(s) 291
BaeI ACNNNNGTAYC 2 cut(s) 49, 82
BalI TGGCCA 1 cut(s) 752
BamHI GGATCC 1 cut(s) 295
BanII GRGCYC 2 cut(s) 105, 209
BauI CACGAG 1 cut(s) 7
BbsI GAAGAC 1 cut(s) 211
Bbv12I GWGCWC 1 cut(s) 105
BbvCI CCTCAGC 1 cut(s) 620
BccI CCATC 2 cut(s) 83, 245
BceAI ACGGC 1 cut(s) 101
BcgI CGANNNNNNTGC 2 cut(s) 151, 185
BciT130I CCWGG 2 cut(s) 82, 130
BcoDI GTCTC 5 cut(s) 71, 250, 308, 388, 750
BfoI RGCGCY 1 cut(s) 48
BisI GCNGC 2 cut(s) 114, 349
BlsI GCNGC 2 cut(s) 115, 350
Bme1390I CCNGG 2 cut(s) 82, 130
Bme18I GGWCC 2 cut(s) 132, 624
BmgT120I GGNCC 2 cut(s) 132, 624
BmiI GGNNCC 1 cut(s) 297
BmrFI CCNGG 2 cut(s) 82, 130
BmrI ACTGGG 1 cut(s) 492
BmsI GCATC 1 cut(s) 171
BmuI ACTGGG 1 cut(s) 492
BpiI GAAGAC 1 cut(s) 211
BpmI CTGGAG 1 cut(s) 370
Bpu10I CCTNAGC 1 cut(s) 620
BpuEI CTTGAG 1 cut(s) 691
BsaBI GATNNNNATC 1 cut(s) 654
BsaHI GRCGYC 2 cut(s) 195, 378
BsaJI CCNNGG 2 cut(s) 432, 600
BsaWI WCCGGW 2 cut(s) 368, 537
BsaXI ACNNNNNCTCC 6 cut(s) 368, 392, 398, 422, 458, 488
Bsc4I CCNNNNNNNGG 4 cut(s) 54, 81, 476, 483
Bse1I ACTGG 2 cut(s) 387, 487
Bse21I CCTNAGG 1 cut(s) 291
Bse8I GATNNNNATC 1 cut(s) 654
BseAI TCCGGA 1 cut(s) 537
BseBI CCWGG 2 cut(s) 82, 130
BseDI CCNNGG 2 cut(s) 432, 600
BseJI GATNNNNATC 1 cut(s) 654
BseLI CCNNNNNNNGG 4 cut(s) 54, 81, 476, 483
BseMII CTCAG 3 cut(s) 305, 332, 611
BseNI ACTGG 2 cut(s) 387, 487
BsePI GCGCGC 1 cut(s) 691
BseRI GAGGAG 2 cut(s) 413, 695
BsgI GTGCAG 1 cut(s) 31
Bsh1236I CGCG 2 cut(s) 494, 693
BshFI GGCC 1 cut(s) 752
BsiHKAI GWGCWC 1 cut(s) 105
BsiSI CCGG 8 cut(s) 192, 369, 477, 538, 575, 610, 627, 644
BslFI GGGAC 1 cut(s) 247
BslI CCNNNNNNNGG 4 cut(s) 54, 81, 476, 483
BsmAI GTCTC 5 cut(s) 71, 250, 308, 388, 750
BsmBI CGTCTC 3 cut(s) 71, 250, 388
BsmFI GGGAC 1 cut(s) 247
BsnI GGCC 1 cut(s) 752
Bsp1286I GDGCHC 2 cut(s) 105, 209
Bsp13I TCCGGA 1 cut(s) 537
Bsp143I GATC 4 cut(s) 295, 423, 448, 655
BspANI GGCC 1 cut(s) 752
BspCNI CTCAG 3 cut(s) 304, 331, 612
BspEI TCCGGA 1 cut(s) 537
BspFNI CGCG 2 cut(s) 494, 693
BspLI GGNNCC 1 cut(s) 297
BspPI GGATC 4 cut(s) 290, 303, 443, 650
BsrI ACTGG 2 cut(s) 387, 487
BssECI CCNNGG 2 cut(s) 432, 600
BssHII GCGCGC 1 cut(s) 691
BssMI GATC 4 cut(s) 295, 423, 448, 655
BssNI GRCGYC 2 cut(s) 195, 378
BssSI CACGAG 1 cut(s) 7
Bst2BI CACGAG 1 cut(s) 7
Bst2UI CCWGG 2 cut(s) 82, 130
Bst4CI ACNGT 2 cut(s) 65, 640
Bst6I CTCTTC 5 cut(s) 191, 218, 257, 716, 735
BstACI GRCGYC 2 cut(s) 195, 378
BstC8I GCNNGC 2 cut(s) 43, 693
BstDEI CTNAG 3 cut(s) 291, 318, 620
BstFNI CGCG 2 cut(s) 494, 693
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 3 cut(s) 47, 693, 695
BstKTI GATC 4 cut(s) 298, 426, 451, 658
BstMAI GTCTC 5 cut(s) 71, 250, 308, 388, 750
BstMBI GATC 4 cut(s) 295, 423, 448, 655
BstMWI GCNNNNNNNGC 2 cut(s) 38, 701
BstNI CCWGG 2 cut(s) 82, 130
BstSCI CCNGG 2 cut(s) 80, 128
BstUI CGCG 2 cut(s) 494, 693
BstV2I GAAGAC 1 cut(s) 211
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
Bsu36I CCTNAGG 1 cut(s) 291
BsuRI GGCC 1 cut(s) 752
BtgZI GCGATG 1 cut(s) 61
BtsIMutI CAGTG 2 cut(s) 394, 480
Cac8I GCNNGC 2 cut(s) 43, 693
CfoI GCGC 3 cut(s) 47, 693, 695
Cfr13I GGNCC 2 cut(s) 132, 624
CseI GACGC 3 cut(s) 97, 184, 500
Csp6I GTAC 1 cut(s) 58
CviAII CATG 1 cut(s) 49
CviQI GTAC 1 cut(s) 58
DdeI CTNAG 3 cut(s) 291, 318, 620
DpnI GATC 4 cut(s) 297, 425, 450, 657
DpnII GATC 4 cut(s) 295, 423, 448, 655
EaeI YGGCCR 1 cut(s) 750
Eam1104I CTCTTC 5 cut(s) 191, 218, 257, 716, 735
EarI CTCTTC 5 cut(s) 191, 218, 257, 716, 735
EciI GGCGGA 5 cut(s) 47, 80, 170, 271, 366
Ecl136II GAGCTC 1 cut(s) 103
Eco24I GRGCYC 2 cut(s) 105, 209
Eco47I GGWCC 2 cut(s) 132, 624
Eco53kI GAGCTC 1 cut(s) 103
Eco81I CCTNAGG 1 cut(s) 291
EcoICRI GAGCTC 1 cut(s) 103
EcoRII CCWGG 2 cut(s) 80, 128
EcoT38I GRGCYC 2 cut(s) 105, 209
Esp3I CGTCTC 3 cut(s) 71, 250, 388
FaeI CATG 1 cut(s) 52
FaiI YATR 1 cut(s) 50
FaqI GGGAC 1 cut(s) 247
FatI CATG 1 cut(s) 48
FauI CCCGC 1 cut(s) 272
Fnu4HI GCNGC 2 cut(s) 114, 349
FriOI GRGCYC 2 cut(s) 105, 209
Fsp4HI GCNGC 2 cut(s) 114, 349
GlaI GCGC 3 cut(s) 46, 692, 694
GluI GCNGC 2 cut(s) 114, 349
GsuI CTGGAG 1 cut(s) 370
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 1 cut(s) 752
HapII CCGG 8 cut(s) 192, 369, 477, 538, 575, 610, 627, 644
HgaI GACGC 3 cut(s) 97, 184, 500
HhaI GCGC 3 cut(s) 47, 693, 695
Hin1I GRCGYC 2 cut(s) 195, 378
Hin1II CATG 1 cut(s) 52
Hin6I GCGC 3 cut(s) 45, 691, 693
HinP1I GCGC 3 cut(s) 45, 691, 693
HindIII AAGCTT 1 cut(s) 702
HinfI GANTC 6 cut(s) 5, 316, 497, 503, 509, 743
HpaII CCGG 8 cut(s) 192, 369, 477, 538, 575, 610, 627, 644
HphI GGTGA 4 cut(s) 88, 265, 328, 448
Hpy166II GTNNAC 2 cut(s) 336, 439
Hpy188I TCNGA 9 cut(s) 300, 433, 453, 490, 502, 508, 528, 553, 595
Hpy188III TCNNGA 6 cut(s) 293, 413, 538, 562, 659, 737
Hpy8I GTNNAC 2 cut(s) 336, 439
Hpy99I CGWCG 4 cut(s) 113, 200, 380, 383
HpyAV CCTTC 3 cut(s) 145, 160, 295
HpyCH4III ACNGT 2 cut(s) 65, 640
HpyCH4IV ACGT 3 cut(s) 24, 270, 378
HpyCH4V TGCA 2 cut(s) 12, 231
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 701
HpyF3I CTNAG 3 cut(s) 291, 318, 620
HpySE526I ACGT 3 cut(s) 24, 270, 378
Hsp92I GRCGYC 2 cut(s) 195, 378
Hsp92II CATG 1 cut(s) 52
HspAI GCGC 3 cut(s) 45, 691, 693
Kpn2I TCCGGA 1 cut(s) 537
Kzo9I GATC 4 cut(s) 295, 423, 448, 655
LweI GCATC 1 cut(s) 171
MaeII ACGT 3 cut(s) 24, 270, 378
MaeIII GTNAC 2 cut(s) 271, 371
MalI GATC 4 cut(s) 297, 425, 450, 657
MboI GATC 4 cut(s) 295, 423, 448, 655
MboII GAAGA 7 cut(s) 178, 205, 211, 244, 659, 733, 752
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 2 cut(s) 105, 209
MlsI TGGCCA 1 cut(s) 752
MluNI TGGCCA 1 cut(s) 752
MlyI GAGTC 4 cut(s) 310, 491, 497, 752
MmeI TCCRAC 2 cut(s) 531, 573
Mox20I TGGCCA 1 cut(s) 752
MroI TCCGGA 1 cut(s) 537
MscI TGGCCA 1 cut(s) 752
Msp20I TGGCCA 1 cut(s) 752
MspI CCGG 8 cut(s) 192, 369, 477, 538, 575, 610, 627, 644
MspR9I CCNGG 2 cut(s) 82, 130
MvaI CCWGG 2 cut(s) 82, 130
MvnI CGCG 2 cut(s) 494, 693
MwoI GCNNNNNNNGC 2 cut(s) 38, 701
NdeII GATC 4 cut(s) 295, 423, 448, 655
NlaIII CATG 1 cut(s) 52
NlaIV GGNNCC 1 cut(s) 297
NmuCI GTSAC 1 cut(s) 271
PauI GCGCGC 1 cut(s) 691
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 240
PfeI GAWTC 1 cut(s) 509
PflFI GACNNNGTC 3 cut(s) 23, 380, 547
PfoI TCCNGGA 1 cut(s) 128
PkrI GCNGC 2 cut(s) 115, 350
PleI GAGTC 4 cut(s) 310, 491, 497, 751
PpsI GAGTC 4 cut(s) 310, 491, 497, 751
Psp124BI GAGCTC 1 cut(s) 105
Psp6I CCWGG 2 cut(s) 80, 128
PspGI CCWGG 2 cut(s) 80, 128
PspN4I GGNNCC 1 cut(s) 297
PspPI GGNCC 2 cut(s) 132, 624
PsuI RGATCY 1 cut(s) 295
PsyI GACNNNGTC 3 cut(s) 23, 380, 547
PteI GCGCGC 1 cut(s) 691
RsaI GTAC 1 cut(s) 59
RsaNI GTAC 1 cut(s) 58
SacI GAGCTC 1 cut(s) 105
SatI GCNGC 2 cut(s) 114, 349
Sau3AI GATC 4 cut(s) 295, 423, 448, 655
Sau96I GGNCC 2 cut(s) 132, 624
SchI GAGTC 4 cut(s) 310, 491, 497, 752
ScrFI CCNGG 2 cut(s) 82, 130
SduI GDGCHC 2 cut(s) 105, 209
SfaNI GCATC 1 cut(s) 171
SinI GGWCC 2 cut(s) 132, 624
SmlI CTYRAG 1 cut(s) 670
SmoI CTYRAG 1 cut(s) 670
SstI GAGCTC 1 cut(s) 105
StyD4I CCNGG 2 cut(s) 80, 128
TaaI ACNGT 2 cut(s) 65, 640
TaiI ACGT 3 cut(s) 27, 273, 381
TaqI TCGA 6 cut(s) 18, 171, 203, 362, 561, 654
TauI GCSGC 2 cut(s) 116, 351
TfiI GAWTC 1 cut(s) 509
TscAI CASTG 2 cut(s) 394, 487
TseFI GTSAC 1 cut(s) 271
Tsp45I GTSAC 1 cut(s) 271
TspDTI ATGAA 1 cut(s) 697
TspRI CASTG 2 cut(s) 394, 487
Tth111I GACNNNGTC 3 cut(s) 23, 380, 547
VpaK11BI GGWCC 2 cut(s) 132, 624
ZraI GACGTC 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.