Rorug02G0222100

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
21512560 .. 21517860
5301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0222100.1

Sequence Viewer

Length: 2634 bp
ATGCCGGCCCTCGGAATGCTAGGGTTTCAGGGGCTTCTGTTCGGGGTCGTTTTGGCGGCGTTCTTTGTGATTCGCCACAAGTGGAGGAATGCGGTGGCGAAGAAGGAGGAGATCATGAGGCTTGTGGCTATGGCTTCCGAGGAGGCCGCAATGGCCGAGTTTCAGGCCACCACGGCTATGTATGCTGCTGCTCCTCCGGTGGCGGCGCCGGTGACCAGTCCGTTTCACTGTGCTGTATGTTATTCCCAAACCACCATGCGGTGCTCGAAATGCAAGAGTGTTAGATACTGTTCTGGGAAGTGTCAAATCATTCACTGGAGACAAGGTCACAAGGACGAATGCCGACCTTCGATTGGCACCATGGAGGTGCAACACAACAGTGATTTAGACGGGGAAGCGGTGCTTCATCGTGGAATAGGTGCACATACCAGTGCAACCTCACCCAGTACTATATCATGGGATGGCTTCACTTCATCTGGTACTGGAGCTGACACCTCTTCGGGTGAGATTCTTAATCATGTCAGTGTTGACAGAGCAGAGAAACCTCTTTTTGATGGTACTGCTCCTGATCTACTTGGAAATATGTCAGAGTATACTAATTTGGTAAATTGTCGAGATAACTTTTCACCTGCAAATAAGTTAGTTAAGATGAAATCCAGTCACAATGATAAAGAGGTAGAATCTGAATCAAAATTGGCCAAAGCTAAGATAGACATGTCTGCTGATGCTCAGCCTGCAAATTTTGCTGGTAAAAAGCCAACTAGAAGGGGTACTTCAATAGAAAAGGTAGTTACTGATGCCTTTAAGTCCAAGAGGTTGTCAACTAGTGACAGGGAAGATGAGCGTAAAGAGGGACCTTTATCAAATAGTGGTTCTAATGGCCGGCCATCTTCAACCACTGGAGGGTTACTGGATTCCAGTTATAGATCTGAAAAAGTTGACGGTTATCATGCCTTGCCTGCCAAAATTGGTAGTATCCCAAGCTTGCCGCAAAATGCTTGTAATGGTCTGAAGACATCCATGAAGAAAGTTGTGCAGCAGTTTAAATCCTCAAAACAGCTGAAATCCAATCTCTCAGGTCCTGAAAATGGGATTGCTGGAAAGTTCAAGGTAATATTTCCATATGAGCTATTTGTGAAACTGTACTCCTACAACAATGTGGATCTTTGCCCATTTGGCCTGACAAATTGTGGGAACAGCTGTTATGCTAATGCTGTGCTACAGTGTTTAGCATTTACTCAGCCTCTTACTTCGTATCTTCTTCAAGGACTCCATTCTAGAGCATGTCAAAAAAAGGACTGGTGCTTTATATGTGAATTTGAAATTCTGCTCCTGAAGGCAAGGGAAGGGAAGTCTTCACTGTCCCCGATTAGGATCTTATCCAGAATACATAAAATTGGAAGCCATCTTGGTCATGGGAAGGAAGAAGATGCTCATGAGTTTTTGAGGTATGCAGTTGATACCATGCAATCTGTTTGCCTCAAGGAAGCTGGGGCTATTGGTCCTTTGGCAGAACAAACAACTCTAGTAGGCATGACCTTTGGAGGTCACCTTCGATCCAAGATAAAGTGCATGAAGTGCCTCGGGAAAACTGAGCAATTTGAGCGGATGATGGATCTTACTGTCGAAATTGATGGGGCAATTGGAACTCTGGAAGAGGCTCTTGCACAATTTACTGCTACTGAAACTTTGGACGGAGATAATAGGTTCCATTGTAACAGGTGTAAATCTTATGAGAAAGCCAGAAAGAAACTTACAGTTCTACAGGCACCAAATATTCTTACAATAGTGTTGAAGCGATTTCAGTCTCGAAACTTCGAGAAGCTGGATAAGTCAGTACGTTTTCCAGAGGTTCTCAACTTGTCACCATACATGGACAGAACAAGTGATAAATCTCCTTTGTACAATCTTTATGCCGTCGTTGTTCACCTGGATATTATGAATGCTGCATATTCAGGCCATTATATATGTTATGTAAAGAATAGTCAAGGCAACTGGTTCAAGATTAATGACAGCTCGGTTGAACCCGTGGAATTAAAGAGGGTCTTATCTGAAGGCGCATACATGCTTCTTTATGCAAGGCGCTCTCCGCGACCCCCACCCTTGGTAGGAAGTAACGCCCTTTCTCATGCTGGGACATCCAATAGAAGGAACTCGGAAGCAGTCCCTTCAAGCCTTACCAAGTCCAAGTTGAGATACACGGTTCCAAGTATGAATAGTTCTGCAGCACAACCAAAGTCTAGTAGAGAATGGTACAGGATGAGTTTTGATGGTTCAAGCAATCAATCATTAGATCCAGATGATTGGAGATCTCATTCCATGTACAGAGTTCCTGCTATGGATTCATTAAGTGAGAGTTCATCGATTTTCAGCTCCTCGGATGCAAGTTCTTGTAGCACCGTGAGCACCAAGGACTCCTCCAGCAATGAAGATCTCTCTGATTACATATTTGGTCAAGTAGGAACAAATCCGTACAGCCAATTCAGGCGTTCATCAGACGTGGTTGCACCTTCCTTGTTTCCAAACTTTGATGTAGATATGAAAGGCCGTACAGAGGACTCAGAAGGCGGAGGAAACTCCACAATTTTGTGTAGTGACAGAAGTAGACATCGCAGGAAGTCAACCTCAGATTAA

Protein Analysis

877

Amino Acids

96.55

Weight (kDa)

8.86

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-MYND PF01753 77 - 114 1.6e-08 MYND finger
UCH PF00443 392 - 692 1.1e-55 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 393 - 674 2.1e-21 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 637
Acc36I ACCTGC 1 cut(s) 637
AccB1I GGYRCC 3 cut(s) 205, 356, 1768
AccBSI CCGCTC 1 cut(s) 1606
AccI GTMKAC 2 cut(s) 593, 2605
AccII CGCG 1 cut(s) 2092
AclWI GGATC 5 cut(s) 1170, 1382, 1551, 1623, 2288
AcoI YGGCCR 4 cut(s) 153, 696, 880, 884
AcsI RAATTY 3 cut(s) 739, 1316, 1323
AcuI CTGAAG 3 cut(s) 1031, 1355, 2073
AcyI GRCGYC 1 cut(s) 206
AflIII ACRYGT 1 cut(s) 714
AhlI ACTAGT 1 cut(s) 824
AjiI CACGTC 1 cut(s) 2500
AjnI CCWGG 1 cut(s) 1929
AleI CACNNNNGTG 1 cut(s) 378
Alw21I GWGCWC 3 cut(s) 266, 424, 2408
Alw26I GTCTC 2 cut(s) 313, 1812
Alw44I GTGCAC 1 cut(s) 420
AlwI GGATC 5 cut(s) 1170, 1382, 1551, 1623, 2288
AlwNI CAGNNNCTG 1 cut(s) 1082
Ama87I CYCGRG 1 cut(s) 1583
ApaLI GTGCAC 1 cut(s) 420
ApeKI GCWGC 5 cut(s) 185, 188, 1036, 1946, 2225
ApoI RAATTY 3 cut(s) 739, 1316, 1323
AseI ATTAAT 1 cut(s) 2007
AspLEI GCGC 3 cut(s) 208, 2060, 2085
AspS9I GGNCC 4 cut(s) 7, 854, 1079, 1502
AsuHPI GGTGA 7 cut(s) 223, 432, 515, 618, 1541, 1857, 1919
AvaI CYCGRG 1 cut(s) 1583
AvaII GGWCC 3 cut(s) 854, 1079, 1502
BaeGI GKGCMC 1 cut(s) 424
BalI TGGCCA 1 cut(s) 698
BanI GGYRCC 3 cut(s) 205, 356, 1768
BbsI GAAGAC 2 cut(s) 1019, 1347
Bbv12I GWGCWC 3 cut(s) 266, 424, 2408
BbvI GCAGC 5 cut(s) 172, 175, 1048, 1933, 2237
BccI CCATC 7 cut(s) 455, 548, 895, 1413, 1606, 1628, 2264
BceAI ACGGC 3 cut(s) 189, 1901, 2532
BciT130I CCWGG 1 cut(s) 1931
BciVI GTATCC 1 cut(s) 986
BcoDI GTCTC 2 cut(s) 313, 1812
BcuI ACTAGT 1 cut(s) 824
BfaI CTAG 6 cut(s) 20, 762, 825, 1278, 1526, 2241
BfmI CTRYAG 3 cut(s) 1220, 1763, 2223
BfoI RGCGCY 2 cut(s) 209, 2086
BfuAI ACCTGC 1 cut(s) 637
BfuI GTATCC 1 cut(s) 986
BglI GCCNNNNNGGC 3 cut(s) 152, 173, 1176
BglII AGATCT 3 cut(s) 926, 2309, 2431
BisI GCNGC 9 cut(s) 57, 147, 186, 189, 204, 989, 1037, 1947, 2226
BlpI GCTNAGC 1 cut(s) 729
BlsI GCNGC 9 cut(s) 58, 148, 187, 190, 205, 990, 1038, 1948, 2227
BmcAI AGTACT 1 cut(s) 448
Bme1390I CCNGG 1 cut(s) 1931
Bme18I GGWCC 3 cut(s) 854, 1079, 1502
BmeT110I CYCGRG 1 cut(s) 1583
BmgBI CACGTC 1 cut(s) 2500
BmgT120I GGNCC 4 cut(s) 7, 854, 1079, 1502
BmiI GGNNCC 6 cut(s) 207, 358, 855, 1709, 1770, 2205
BmrFI CCNGG 1 cut(s) 1931
BmrI ACTGGG 1 cut(s) 438
BmsI GCATC 4 cut(s) 715, 787, 1420, 2371
BmuI ACTGGG 1 cut(s) 438
BpiI GAAGAC 2 cut(s) 1019, 1347
BpmI CTGGAG 4 cut(s) 337, 504, 921, 2404
Bpu1102I GCTNAGC 1 cut(s) 729
BpuEI CTTGAG 1 cut(s) 1466
Bsa29I ATCGAT 1 cut(s) 2363
BsaBI GATNNNNATC 1 cut(s) 1373
BsaHI GRCGYC 1 cut(s) 206
BsaJI CCNNGG 9 cut(s) 10, 138, 171, 360, 1582, 2028, 2103, 2376, 2409
BsaWI WCCGGW 1 cut(s) 196
BsaXI ACNNNNNCTCC 2 cut(s) 310, 340
Bse118I RCCGGY 3 cut(s) 4, 208, 882
Bse3DI GCAATG 2 cut(s) 156, 2431
Bse8I GATNNNNATC 1 cut(s) 1373
BseBI CCWGG 1 cut(s) 1931
BseCI ATCGAT 1 cut(s) 2363
BseDI CCNNGG 9 cut(s) 10, 138, 171, 360, 1582, 2028, 2103, 2376, 2409
BseGI GGATG 6 cut(s) 466, 1016, 1614, 2138, 2265, 2386
BseJI GATNNNNATC 1 cut(s) 1373
BseMI GCAATG 2 cut(s) 156, 2431
BseMII CTCAG 5 cut(s) 743, 1089, 1253, 1584, 2574
BseRI GAGGAG 5 cut(s) 122, 155, 183, 2365, 2407
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 5 cut(s) 172, 175, 1048, 1933, 2237
BseYI CCCAGC 2 cut(s) 1490, 2132
BsgI GTGCAG 1 cut(s) 1055
Bsh1236I CGCG 1 cut(s) 2092
BshNI GGYRCC 3 cut(s) 205, 356, 1768
BshVI ATCGAT 1 cut(s) 2363
BsiHKAI GWGCWC 3 cut(s) 266, 424, 2408
BsiHKCI CYCGRG 1 cut(s) 1583
BsiSI CCGG 4 cut(s) 5, 197, 209, 883
BslFI GGGAC 4 cut(s) 867, 1348, 2149, 2150
BsmAI GTCTC 2 cut(s) 313, 1812
BsmFI GGGAC 4 cut(s) 867, 1348, 2149, 2150
BsmI GAATGC 4 cut(s) 21, 94, 344, 1948
BsoBI CYCGRG 1 cut(s) 1583
Bsp1286I GDGCHC 3 cut(s) 266, 424, 2408
Bsp1407I TGTACA 2 cut(s) 1902, 2322
Bsp1720I GCTNAGC 1 cut(s) 729
Bsp19I CCATGG 1 cut(s) 360
BspCNI CTCAG 5 cut(s) 742, 1088, 1252, 1585, 2573
BspDI ATCGAT 1 cut(s) 2363
BspFNI CGCG 1 cut(s) 2092
BspHI TCATGA 2 cut(s) 114, 1435
BspLI GGNNCC 6 cut(s) 207, 358, 855, 1709, 1770, 2205
BspMAI CTGCAG 1 cut(s) 2227
BspMI ACCTGC 1 cut(s) 637
BspPI GGATC 5 cut(s) 1170, 1382, 1551, 1623, 2288
BspT107I GGYRCC 3 cut(s) 205, 356, 1768
BsrBI CCGCTC 1 cut(s) 1606
BsrDI GCAATG 2 cut(s) 156, 2431
BsrFI RCCGGY 3 cut(s) 4, 208, 882
BsrGI TGTACA 2 cut(s) 1902, 2322
BssAI RCCGGY 3 cut(s) 4, 208, 882
BssECI CCNNGG 9 cut(s) 10, 138, 171, 360, 1582, 2028, 2103, 2376, 2409
BssNAI GTATAC 1 cut(s) 594
BssNI GRCGYC 1 cut(s) 206
BssT1I CCWWGG 3 cut(s) 360, 2103, 2409
Bst1107I GTATAC 1 cut(s) 594
Bst2UI CCWGG 1 cut(s) 1931
Bst6I CTCTTC 2 cut(s) 502, 1650
BstACI GRCGYC 1 cut(s) 206
BstAPI GCANNNNNTGC 2 cut(s) 743, 1578
BstAUI TGTACA 2 cut(s) 1902, 2322
BstC8I GCNNGC 5 cut(s) 6, 735, 884, 960, 986
BstDEI CTNAG 7 cut(s) 705, 729, 1075, 1239, 1593, 2560, 2626
BstDSI CCRYGG 3 cut(s) 171, 360, 2028
BstEII GGTNACC 2 cut(s) 211, 1547
BstF5I GGATG 6 cut(s) 466, 1016, 1614, 2138, 2265, 2386
BstFNI CGCG 1 cut(s) 2092
BstH2I RGCGCY 2 cut(s) 209, 2086
BstHHI GCGC 3 cut(s) 208, 2060, 2085
BstMAI GTCTC 2 cut(s) 313, 1812
BstNI CCWGG 1 cut(s) 1931
BstNSI RCATGY 3 cut(s) 718, 1287, 2068
BstPI GGTNACC 2 cut(s) 211, 1547
BstSCI CCNGG 1 cut(s) 1929
BstSFI CTRYAG 3 cut(s) 1220, 1763, 2223
BstSLI GKGCMC 1 cut(s) 424
BstUI CGCG 1 cut(s) 2092
BstV1I GCAGC 5 cut(s) 172, 175, 1048, 1933, 2237
BstV2I GAAGAC 2 cut(s) 1019, 1347
BstX2I RGATCY 7 cut(s) 926, 1162, 1374, 1615, 2293, 2309, 2431
BstXI CCANNNNNNTGG 1 cut(s) 2304
BstYI RGATCY 7 cut(s) 926, 1162, 1374, 1615, 2293, 2309, 2431
BstZ17I GTATAC 1 cut(s) 594
Bsu15I ATCGAT 1 cut(s) 2363
BsuI GTATCC 1 cut(s) 986
BsuTUI ATCGAT 1 cut(s) 2363
BtgI CCRYGG 3 cut(s) 171, 360, 2028
BtgZI GCGATG 1 cut(s) 2594
BtrI CACGTC 1 cut(s) 2500
BtsCI GGATG 6 cut(s) 466, 1016, 1614, 2138, 2265, 2386
BtsIMutI CAGTG 8 cut(s) 226, 313, 385, 436, 529, 897, 1229, 1358
BveI ACCTGC 1 cut(s) 637
Cac8I GCNNGC 5 cut(s) 6, 735, 884, 960, 986
CaiI CAGNNNCTG 1 cut(s) 1082
CciI TCATGA 2 cut(s) 114, 1435
CfoI GCGC 3 cut(s) 208, 2060, 2085
Cfr10I RCCGGY 3 cut(s) 4, 208, 882
Cfr13I GGNCC 4 cut(s) 7, 854, 1079, 1502
ClaI ATCGAT 1 cut(s) 2363
DdeI CTNAG 7 cut(s) 705, 729, 1075, 1239, 1593, 2560, 2626
DinI GGCGCC 1 cut(s) 207
DraI TTTAAA 1 cut(s) 1045
EaeI YGGCCR 4 cut(s) 153, 696, 880, 884
Eam1104I CTCTTC 2 cut(s) 502, 1650
EarI CTCTTC 2 cut(s) 502, 1650
EciI GGCGGA 1 cut(s) 2583
Eco130I CCWWGG 3 cut(s) 360, 2103, 2409
Eco47I GGWCC 3 cut(s) 854, 1079, 1502
Eco57I CTGAAG 3 cut(s) 1031, 1355, 2073
Eco88I CYCGRG 1 cut(s) 1583
Eco91I GGTNACC 2 cut(s) 211, 1547
EcoO109I RGGNCCY 2 cut(s) 854, 1079
EcoO65I GGTNACC 2 cut(s) 211, 1547
EcoRII CCWGG 1 cut(s) 1929
EcoT14I CCWWGG 3 cut(s) 360, 2103, 2409
EgeI GGCGCC 1 cut(s) 207
EheI GGCGCC 1 cut(s) 207
ErhI CCWWGG 3 cut(s) 360, 2103, 2409
FalI AAGNNNNNCTT 8 cut(s) 387, 419, 757, 789, 1647, 1679, 2030, 2062
FaqI GGGAC 4 cut(s) 867, 1348, 2149, 2150
FauNDI CATATG 1 cut(s) 1123
FblI GTMKAC 2 cut(s) 593, 2605
Fnu4HI GCNGC 9 cut(s) 57, 147, 186, 189, 204, 989, 1037, 1947, 2226
FokI GGATG 6 cut(s) 473, 1003, 1621, 2125, 2272, 2393
FseI GGCCGGCC 1 cut(s) 886
Fsp4HI GCNGC 9 cut(s) 57, 147, 186, 189, 204, 989, 1037, 1947, 2226
FspBI CTAG 6 cut(s) 20, 762, 825, 1278, 1526, 2241
GlaI GCGC 3 cut(s) 207, 2059, 2084
GluI GCNGC 9 cut(s) 57, 147, 186, 189, 204, 989, 1037, 1947, 2226
GsaI CCCAGC 2 cut(s) 1494, 2136
GsuI CTGGAG 4 cut(s) 337, 504, 921, 2404
HaeII RGCGCY 2 cut(s) 209, 2086
HapII CCGG 4 cut(s) 5, 197, 209, 883
HhaI GCGC 3 cut(s) 208, 2060, 2085
Hin1I GRCGYC 1 cut(s) 206
Hin6I GCGC 3 cut(s) 206, 2058, 2083
HinP1I GCGC 3 cut(s) 206, 2058, 2083
HincII GTYRAC 4 cut(s) 529, 822, 940, 2622
HindII GTYRAC 4 cut(s) 529, 822, 940, 2622
HindIII AAGCTT 1 cut(s) 982
HinfI GANTC 9 cut(s) 70, 508, 680, 686, 914, 1269, 2342, 2414, 2558
HpaII CCGG 4 cut(s) 5, 197, 209, 883
HphI GGTGA 7 cut(s) 223, 432, 515, 618, 1541, 1857, 1919
Hpy166II GTNNAC 8 cut(s) 422, 529, 594, 822, 940, 1927, 2606, 2622
Hpy8I GTNNAC 8 cut(s) 422, 529, 594, 822, 940, 1927, 2606, 2622
Hpy99I CGWCG 1 cut(s) 1922
HpyCH4IV ACGT 2 cut(s) 1840, 2499
HpyF3I CTNAG 7 cut(s) 705, 729, 1075, 1239, 1593, 2560, 2626
HpySE526I ACGT 2 cut(s) 1840, 2499
Hsp92I GRCGYC 1 cut(s) 206
HspAI GCGC 3 cut(s) 206, 2058, 2083
KasI GGCGCC 1 cut(s) 205
KroI GCCGGC 2 cut(s) 4, 882
KroNI GCCGGC 2 cut(s) 6, 884
LmnI GCTCC 5 cut(s) 196, 485, 568, 1335, 2378
Lsp1109I GCAGC 5 cut(s) 172, 175, 1048, 1933, 2237
LweI GCATC 4 cut(s) 715, 787, 1420, 2371
MaeI CTAG 6 cut(s) 20, 762, 825, 1278, 1526, 2241
MaeII ACGT 2 cut(s) 1840, 2499
MbiI CCGCTC 1 cut(s) 1606
MfeI CAATTG 1 cut(s) 1641
MflI RGATCY 7 cut(s) 926, 1162, 1374, 1615, 2293, 2309, 2431
MhlI GDGCHC 3 cut(s) 266, 424, 2408
MlsI TGGCCA 1 cut(s) 698
MluNI TGGCCA 1 cut(s) 698
Mly113I GGCGCC 1 cut(s) 206
MlyI GAGTC 3 cut(s) 1263, 2408, 2552
Mox20I TGGCCA 1 cut(s) 698
MroNI GCCGGC 2 cut(s) 4, 882
MscI TGGCCA 1 cut(s) 698
MseI TTAA 8 cut(s) 513, 645, 804, 1044, 2007, 2036, 2348, 2632
MslI CAYNNNNRTG 5 cut(s) 176, 365, 378, 429, 522
Msp20I TGGCCA 1 cut(s) 698
MspA1I CMGCKG 2 cut(s) 1060, 1200
MspI CCGG 4 cut(s) 5, 197, 209, 883
MspR9I CCNGG 1 cut(s) 1931
MunI CAATTG 1 cut(s) 1641
Mva1269I GAATGC 4 cut(s) 21, 94, 344, 1948
MvaI CCWGG 1 cut(s) 1931
MvnI CGCG 1 cut(s) 2092
NaeI GCCGGC 2 cut(s) 6, 884
NarI GGCGCC 1 cut(s) 206
NcoI CCATGG 1 cut(s) 360
NdeI CATATG 1 cut(s) 1123
NgoMIV GCCGGC 2 cut(s) 4, 882
NlaIV GGNNCC 6 cut(s) 207, 358, 855, 1709, 1770, 2205
NmeAIII GCCGAG 1 cut(s) 181
NmuCI GTSAC 7 cut(s) 211, 326, 659, 827, 1547, 1863, 2594
NspI RCATGY 3 cut(s) 718, 1287, 2068
OliI CACNNNNGTG 1 cut(s) 378
PagI TCATGA 2 cut(s) 114, 1435
PaqCI CACCTGC 1 cut(s) 637
PciI ACATGT 1 cut(s) 714
PctI GAATGC 4 cut(s) 21, 94, 344, 1948
PdiI GCCGGC 2 cut(s) 6, 884
PfeI GAWTC 6 cut(s) 70, 508, 680, 686, 914, 2342
PflFI GACNNNGTC 1 cut(s) 324
PkrI GCNGC 9 cut(s) 58, 148, 187, 190, 205, 990, 1038, 1948, 2227
PleI GAGTC 3 cut(s) 1263, 2408, 2552
PluTI GGCGCC 1 cut(s) 209
PpsI GAGTC 3 cut(s) 1263, 2408, 2552
PpuMI RGGWCCY 2 cut(s) 854, 1079
PscI ACATGT 1 cut(s) 714
PshBI ATTAAT 1 cut(s) 2007
Psp5II RGGWCCY 2 cut(s) 854, 1079
Psp6I CCWGG 1 cut(s) 1929
PspEI GGTNACC 2 cut(s) 211, 1547
PspFI CCCAGC 2 cut(s) 1490, 2132
PspGI CCWGG 1 cut(s) 1929
PspN4I GGNNCC 6 cut(s) 207, 358, 855, 1709, 1770, 2205
PspPI GGNCC 4 cut(s) 7, 854, 1079, 1502
PspPPI RGGWCCY 2 cut(s) 854, 1079
PsrI GAACNNNNNNTAC 2 cut(s) 2203, 2235
PstI CTGCAG 1 cut(s) 2227
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 7 cut(s) 926, 1162, 1374, 1615, 2293, 2309, 2431
PsyI GACNNNGTC 1 cut(s) 324
PvuII CAGCTG 2 cut(s) 1060, 1200
RigI GGCCGGCC 1 cut(s) 886
RseI CAYNNNNRTG 5 cut(s) 176, 365, 378, 429, 522
SaqAI TTAA 8 cut(s) 513, 645, 804, 1044, 2007, 2036, 2348, 2632
SatI GCNGC 9 cut(s) 57, 147, 186, 189, 204, 989, 1037, 1947, 2226
Sau96I GGNCC 4 cut(s) 7, 854, 1079, 1502
ScaI AGTACT 1 cut(s) 448
SchI GAGTC 3 cut(s) 1263, 2408, 2552
ScrFI CCNGG 1 cut(s) 1931
SduI GDGCHC 3 cut(s) 266, 424, 2408
SfaNI GCATC 4 cut(s) 715, 787, 1420, 2371
SfcI CTRYAG 3 cut(s) 1220, 1763, 2223
SfiI GGCCNNNNNGGCC 1 cut(s) 152
SfoI GGCGCC 1 cut(s) 207
SgrAI CRCCGGYG 1 cut(s) 208
SinI GGWCC 3 cut(s) 854, 1079, 1502
SmiMI CAYNNNNRTG 5 cut(s) 176, 365, 378, 429, 522
SmlI CTYRAG 1 cut(s) 1481
SmoI CTYRAG 1 cut(s) 1481
SpeI ACTAGT 1 cut(s) 824
SspDI GGCGCC 1 cut(s) 205
SspI AATATT 2 cut(s) 1116, 1777
SspMI CTAG 6 cut(s) 20, 762, 825, 1278, 1526, 2241
StyD4I CCNGG 1 cut(s) 1929
StyI CCWWGG 3 cut(s) 360, 2103, 2409
TaiI ACGT 2 cut(s) 1843, 2502
TaqI TCGA 8 cut(s) 266, 350, 613, 1555, 1626, 1810, 1818, 2363
TatI WGTACW 4 cut(s) 446, 1143, 1902, 2322
TauI GCSGC 4 cut(s) 59, 149, 206, 991
TfiI GAWTC 6 cut(s) 70, 508, 680, 686, 914, 2342
Tru1I TTAA 8 cut(s) 513, 645, 804, 1044, 2007, 2036, 2348, 2632
Tru9I TTAA 8 cut(s) 513, 645, 804, 1044, 2007, 2036, 2348, 2632
TscAI CASTG 8 cut(s) 233, 320, 385, 436, 529, 904, 1229, 1365
TseFI GTSAC 7 cut(s) 211, 326, 659, 827, 1547, 1863, 2594
TseI GCWGC 5 cut(s) 185, 188, 1036, 1946, 2225
Tsp45I GTSAC 7 cut(s) 211, 326, 659, 827, 1547, 1863, 2594
TspGWI ACGGA 3 cut(s) 210, 1710, 2460
TspRI CASTG 8 cut(s) 233, 320, 385, 436, 529, 904, 1229, 1365
Tth111I GACNNNGTC 1 cut(s) 324
VneI GTGCAC 1 cut(s) 420
VpaK11BI GGWCC 3 cut(s) 854, 1079, 1502
VspI ATTAAT 1 cut(s) 2007
XapI RAATTY 3 cut(s) 739, 1316, 1323
XbaI TCTAGA 1 cut(s) 1277
XceI RCATGY 3 cut(s) 718, 1287, 2068
XcmI CCANNNNNNNNNTGG 1 cut(s) 1412
XmiI GTMKAC 2 cut(s) 593, 2605
XspI CTAG 6 cut(s) 20, 762, 825, 1278, 1526, 2241
ZrmI AGTACT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.