Rmu_sc0004344.1_g000021

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004344.1
Physical Location & Seq
Reverse (-)
80937 .. 81266
330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004344.1_g000021.1.cds

Sequence Viewer

Length: 330 bp
atggtaatggttaatgcgtgggcaatacatagagatgttgagttgtgggatgatccggaaagctttaagcccgagaggttcaaaaatggcgaccatgactcatacaaactcatgccatttggactgggaagaagggcttgccctggaatgagtctagcccaacgtgtggtaggcctaactttagggtcgttgattcaatgctttgaatgggagagagtagatgataaaaatgttgatatgaccgaaggcaaaggagtcaccatgcctaaagttgtgccattggaggctatgtgtagagcacgtgccattgtgaacaaaattcttatttaa

Protein Analysis

109

Amino Acids

12.38

Weight (kDa)

6.72

Isoelectric Point (pI)

34.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 166
AccIII TCCGGA 1 cut(s) 55
AclWI GGATC 1 cut(s) 47
AcsI RAATTY 1 cut(s) 318
AcvI CACGTG 1 cut(s) 302
AfiI CCNNNNNNNGG 1 cut(s) 166
AflIII ACRYGT 1 cut(s) 163
AgsI TTSAA 3 cut(s) 82, 197, 206
AjnI CCWGG 1 cut(s) 142
AluBI AGCT 1 cut(s) 63
AluI AGCT 1 cut(s) 63
Alw21I GWGCWC 1 cut(s) 301
AlwI GGATC 1 cut(s) 47
Ama87I CYCGRG 1 cut(s) 71
Aor13HI TCCGGA 1 cut(s) 55
AoxI GGCC 1 cut(s) 172
ApoI RAATTY 1 cut(s) 318
AsuHPI GGTGA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 71
BbrPI CACGTG 1 cut(s) 302
Bbv12I GWGCWC 1 cut(s) 301
BciT130I CCWGG 1 cut(s) 144
BfaI CTAG 1 cut(s) 155
Bme1390I CCNGG 1 cut(s) 144
BmeT110I CYCGRG 1 cut(s) 71
BmrFI CCNGG 1 cut(s) 144
BmrI ACTGGG 1 cut(s) 134
BmuI ACTGGG 1 cut(s) 134
BsaAI YACGTR 1 cut(s) 302
BsaJI CCNNGG 1 cut(s) 142
BsaWI WCCGGW 1 cut(s) 55
BsaXI ACNNNNNCTCC 2 cut(s) 275, 305
Bsc4I CCNNNNNNNGG 1 cut(s) 166
Bse1I ACTGG 1 cut(s) 129
BseAI TCCGGA 1 cut(s) 55
BseBI CCWGG 1 cut(s) 144
BseDI CCNNGG 1 cut(s) 142
BseGI GGATG 1 cut(s) 55
BseLI CCNNNNNNNGG 1 cut(s) 166
BseNI ACTGG 1 cut(s) 129
BshFI GGCC 1 cut(s) 174
BsiHKAI GWGCWC 1 cut(s) 301
BsiHKCI CYCGRG 1 cut(s) 71
BsiSI CCGG 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 166
BsnI GGCC 1 cut(s) 174
BsoBI CYCGRG 1 cut(s) 71
Bsp1286I GDGCHC 1 cut(s) 301
Bsp13I TCCGGA 1 cut(s) 55
Bsp143I GATC 1 cut(s) 52
BspANI GGCC 1 cut(s) 174
BspEI TCCGGA 1 cut(s) 55
BspPI GGATC 1 cut(s) 47
BsrI ACTGG 1 cut(s) 129
BssECI CCNNGG 1 cut(s) 142
BssMI GATC 1 cut(s) 52
Bst2UI CCWGG 1 cut(s) 144
BstBAI YACGTR 1 cut(s) 302
BstC8I GCNNGC 1 cut(s) 139
BstF5I GGATG 1 cut(s) 55
BstKTI GATC 1 cut(s) 55
BstMBI GATC 1 cut(s) 52
BstNI CCWGG 1 cut(s) 144
BstSCI CCNGG 1 cut(s) 142
BsuRI GGCC 1 cut(s) 174
BtsCI GGATG 1 cut(s) 55
Cac8I GCNNGC 1 cut(s) 139
CviAII CATG 3 cut(s) 95, 112, 262
CviJI RGCY 6 cut(s) 63, 70, 137, 158, 174, 287
CviKI_1 RGCY 6 cut(s) 63, 70, 137, 158, 174, 287
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
Eco147I AGGCCT 1 cut(s) 174
Eco72I CACGTG 1 cut(s) 302
Eco88I CYCGRG 1 cut(s) 71
EcoRII CCWGG 1 cut(s) 142
FaeI CATG 3 cut(s) 98, 115, 265
FaiI YATR 7 cut(s) 30, 96, 103, 113, 239, 263, 290
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FatI CATG 3 cut(s) 94, 111, 261
FokI GGATG 1 cut(s) 62
FspBI CTAG 1 cut(s) 155
HaeIII GGCC 1 cut(s) 174
HapII CCGG 1 cut(s) 56
Hin1II CATG 3 cut(s) 98, 115, 265
HindIII AAGCTT 1 cut(s) 61
HinfI GANTC 4 cut(s) 98, 151, 193, 255
HpaII CCGG 1 cut(s) 56
HphI GGTGA 1 cut(s) 250
Hpy166II GTNNAC 1 cut(s) 313
Hpy188III TCNNGA 1 cut(s) 56
Hpy8I GTNNAC 1 cut(s) 313
HpyAV CCTTC 2 cut(s) 126, 239
HpyCH4IV ACGT 2 cut(s) 163, 301
HpySE526I ACGT 2 cut(s) 163, 301
Hsp92II CATG 3 cut(s) 98, 115, 265
Kpn2I TCCGGA 1 cut(s) 55
Kzo9I GATC 1 cut(s) 52
LpnPI CCDG 4 cut(s) 69, 110, 129, 156
MaeI CTAG 1 cut(s) 155
MaeII ACGT 2 cut(s) 163, 301
MaeIII GTNAC 1 cut(s) 256
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 1 cut(s) 141
MhlI GDGCHC 1 cut(s) 301
MluCI AATT 1 cut(s) 318
MlyI GAGTC 3 cut(s) 92, 160, 264
MnlI CCTC 2 cut(s) 69, 277
MroI TCCGGA 1 cut(s) 55
MseI TTAA 3 cut(s) 12, 66, 328
MslI CAYNNNNRTG 1 cut(s) 33
MspI CCGG 1 cut(s) 56
MspR9I CCNGG 1 cut(s) 144
MvaI CCWGG 1 cut(s) 144
NdeII GATC 1 cut(s) 52
NlaIII CATG 3 cut(s) 98, 115, 265
NmuCI GTSAC 1 cut(s) 256
PceI AGGCCT 1 cut(s) 174
PfeI GAWTC 1 cut(s) 193
PflMI CCANNNNNTGG 1 cut(s) 166
PleI GAGTC 3 cut(s) 92, 159, 263
PmaCI CACGTG 1 cut(s) 302
PmlI CACGTG 1 cut(s) 302
PpsI GAGTC 3 cut(s) 92, 159, 263
Ppu21I YACGTR 1 cut(s) 302
Psp6I CCWGG 1 cut(s) 142
PspCI CACGTG 1 cut(s) 302
PspGI CCWGG 1 cut(s) 142
RseI CAYNNNNRTG 1 cut(s) 33
SaqAI TTAA 3 cut(s) 12, 66, 328
Sau3AI GATC 1 cut(s) 52
SchI GAGTC 3 cut(s) 92, 160, 264
ScrFI CCNGG 1 cut(s) 144
SduI GDGCHC 1 cut(s) 301
SetI ASST 4 cut(s) 65, 80, 166, 304
SmiMI CAYNNNNRTG 1 cut(s) 33
Sse9I AATT 1 cut(s) 318
SseBI AGGCCT 1 cut(s) 174
SspMI CTAG 1 cut(s) 155
StuI AGGCCT 1 cut(s) 174
StyD4I CCNGG 1 cut(s) 142
TaiI ACGT 2 cut(s) 166, 304
TaqII GACCGA 1 cut(s) 257
TasI AATT 1 cut(s) 318
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 3 cut(s) 12, 66, 328
Tru9I TTAA 3 cut(s) 12, 66, 328
TseFI GTSAC 1 cut(s) 256
Tsp45I GTSAC 1 cut(s) 256
Van91I CCANNNNNTGG 1 cut(s) 166
XapI RAATTY 1 cut(s) 318
XspI CTAG 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.