Rorug02G0139700

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
12290527 .. 12294227
3701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0139700.1

Sequence Viewer

Length: 1275 bp
ATGGAGCTAGCTCTACACACGTCTGCAACTCTCCCTAGAGATAATTCCCTCACCCATTACACCAATTCCAAATTCCTCACTACCCAACACCACCACAACACTCGTTTTCCTCGTTCCACTAGAAAACCCAACTTCCAGGCCAGAATTCCAACAACAATAACCACCTGGAAACTTTCGTCCGCCACAAAACCACCGCTCAGGGTCAGCGAACAACAAAATGGCGAACAAGAAGAAGATGAAGACTCGGAGTACTCTTATTCCGACGAAGACTCGTCGCTGCTGTCCCTGAGTGAGAAGCCTGACAGAAACATGGCTATGCTTGATGACTACGAGATAGAGGAGCTTGACTATGCTACCGATCCTAACCATAGGAGTGGGTATGTGGCTGTTCTGGGGAAGCCCAATGTGGGAAAGAGTACTCTTTCAAACCAAATGGTTGGTCAGAAATTGTCAATTGTTACTGATAAGCCTCAAACTACAAGGCATAGAATTCTTGGTATATGTTCTGGCTCAGACTATCAGATGATACTTTATGACACACCCGGTGTTATTGAGAAGAAAATGCACAAGTTGGATACTATGATGATGAAGAATGTTCGCAGCGCCGTTATTAATGCGGATTGTGTACTTGTTCTTGTTGATGCATGTAAAGTGCCTGAAAATATTAATGAAGTGGTGGAAGAAGGTGTGGGTAACCAGACAGATAGCCTGCCGCCTACTTTGCTGGTCATGAATAAGAAAGATTTGATTAAGCCAGGTGAAATTGCAAAGAAACTAGAGTGGTATGAGAAGTTTACAAATGTTGATGAGGTCATACCAGTGAGTGCCAAACACGGTCAGGGAGTGGAAGACGTGAAGCAGTGGATATTGTCAAAACTTCCCTTCGGCCCAGCTTATTATCCAAAGGACATCGTAAGTGAGCACCCAGAAAGATTTTTTGTATCAGAAATTGTGAGAGAAAAGATCTTTATGCAATACAGGAAAGAGATTCCTTATGCATGTCAGGTGAATGTTGTGAGCTACAAAACTAGGCCAGCAGCAAAAGATTTTATACAAGTGGAAATCGTTGTTGAGAAAAATTCACAGAAAATCATCCTTATTGGAAAAGATGGGAGAGCTTTGAAACTACTTGCAACGGCATCGCGGCTTGACATAGAAGATTTCTTACAGAAGAAAGTTTTTCTAGAGGTCGAGGTGAAGGTTAAAGAGAACTGGCGGCAAGATGAAGGGCTCTTGAAGAATTATGGCTATGGGGGTCAAATTCAAACATTATGA

Protein Analysis

424

Amino Acids

48.27

Weight (kDa)

6.12

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 128 - 246 1.4e-23 50S ribosome-binding GTPase
FeoB_N PF02421 128 - 287 1.1e-11 Ferrous iron transport protein B
KH_2 PF07650 329 - 406 7.8e-15 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 196
AccII CGCG 1 cut(s) 1144
AciI CCGC 6 cut(s) 180, 194, 617, 713, 1144, 1216
AclWI GGATC 1 cut(s) 353
AcsI RAATTY 5 cut(s) 71, 144, 489, 1078, 1260
AdeI CACNNNGTG 1 cut(s) 545
AfaI GTAC 3 cut(s) 251, 418, 627
AfiI CCNNNNNNNGG 1 cut(s) 407
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 4 cut(s) 426, 1123, 1237, 1265
AjiI CACGTC 2 cut(s) 21, 853
AjnI CCWGG 3 cut(s) 135, 164, 754
AjuI GAANNNNNNNTTGG 2 cut(s) 56, 88
AluBI AGCT 6 cut(s) 7, 11, 343, 893, 1020, 1118
AluI AGCT 6 cut(s) 7, 11, 343, 893, 1020, 1118
Alw21I GWGCWC 1 cut(s) 924
AlwI GGATC 1 cut(s) 353
AoxI GGCC 3 cut(s) 138, 886, 1031
ApeKI GCWGC 3 cut(s) 277, 600, 1037
ApoI RAATTY 5 cut(s) 71, 144, 489, 1078, 1260
ArsI GACNNNNNNTTYG 2 cut(s) 424, 456
AseI ATTAAT 2 cut(s) 612, 666
AspLEI GCGC 1 cut(s) 605
AspS9I GGNCC 1 cut(s) 887
AsuC2I CCSGG 1 cut(s) 543
AsuHPI GGTGA 4 cut(s) 43, 770, 1018, 1207
AsuNHI GCTAGC 1 cut(s) 7
BanII GRGCYC 1 cut(s) 1233
BarI GAAGNNNNNNTAC 2 cut(s) 1149, 1181
BbsI GAAGAC 3 cut(s) 246, 273, 855
Bbv12I GWGCWC 1 cut(s) 924
BbvI GCAGC 3 cut(s) 264, 612, 1049
BccI CCATC 1 cut(s) 1103
BceAI ACGGC 2 cut(s) 590, 1152
BcgI CGANNNNNNTGC 2 cut(s) 1122, 1156
BciT130I CCWGG 3 cut(s) 137, 166, 756
BciVI GTATCC 1 cut(s) 568
BcnI CCSGG 1 cut(s) 543
BfaI CTAG 6 cut(s) 8, 36, 120, 776, 1029, 1184
BfoI RGCGCY 1 cut(s) 606
BfuI GTATCC 1 cut(s) 568
BglII AGATCT 1 cut(s) 963
BisI GCNGC 6 cut(s) 278, 601, 713, 1038, 1145, 1217
BlsI GCNGC 6 cut(s) 279, 602, 714, 1039, 1146, 1218
BmcAI AGTACT 2 cut(s) 251, 418
Bme1390I CCNGG 4 cut(s) 137, 166, 543, 756
BmgBI CACGTC 2 cut(s) 21, 853
BmgT120I GGNCC 1 cut(s) 887
BmrFI CCNGG 4 cut(s) 137, 166, 543, 756
BmsI GCATC 2 cut(s) 631, 1148
BmtI GCTAGC 1 cut(s) 11
BpiI GAAGAC 3 cut(s) 246, 273, 855
Bpu10I CCTNAGC 1 cut(s) 197
BpuMI CCSGG 1 cut(s) 543
Bsc4I CCNNNNNNNGG 1 cut(s) 407
Bse1I ACTGG 2 cut(s) 818, 1217
BseBI CCWGG 3 cut(s) 137, 166, 756
BseGI GGATG 1 cut(s) 1092
BseLI CCNNNNNNNGG 1 cut(s) 407
BseMII CTCAG 3 cut(s) 211, 278, 525
BseNI ACTGG 2 cut(s) 818, 1217
BseRI GAGGAG 1 cut(s) 353
BseXI GCAGC 3 cut(s) 264, 612, 1049
BseYI CCCAGC 1 cut(s) 889
Bsh1236I CGCG 1 cut(s) 1144
BshFI GGCC 3 cut(s) 140, 888, 1033
BsiHKAI GWGCWC 1 cut(s) 924
BsiSI CCGG 1 cut(s) 543
BslFI GGGAC 1 cut(s) 268
BslI CCNNNNNNNGG 1 cut(s) 407
BsmFI GGGAC 1 cut(s) 268
BsnI GGCC 3 cut(s) 140, 888, 1033
Bsp1286I GDGCHC 2 cut(s) 924, 1233
Bsp143I GATC 2 cut(s) 358, 963
BspACI CCGC 6 cut(s) 180, 194, 617, 713, 1144, 1216
BspANI GGCC 3 cut(s) 140, 888, 1033
BspCNI CTCAG 3 cut(s) 210, 279, 524
BspFNI CGCG 1 cut(s) 1144
BspHI TCATGA 1 cut(s) 729
BspOI GCTAGC 1 cut(s) 11
BspPI GGATC 1 cut(s) 353
BsrBI CCGCTC 1 cut(s) 196
BsrI ACTGG 2 cut(s) 818, 1217
BssMI GATC 2 cut(s) 358, 963
Bst2UI CCWGG 3 cut(s) 137, 166, 756
Bst4CI ACNGT 1 cut(s) 836
BstC8I GCNNGC 3 cut(s) 9, 710, 1035
BstDEI CTNAG 3 cut(s) 197, 287, 511
BstEII GGTNACC 1 cut(s) 692
BstF5I GGATG 1 cut(s) 1092
BstFNI CGCG 1 cut(s) 1144
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 1 cut(s) 605
BstKTI GATC 2 cut(s) 361, 966
BstMBI GATC 2 cut(s) 358, 963
BstMWI GCNNNNNNNGC 1 cut(s) 721
BstNI CCWGG 3 cut(s) 137, 166, 756
BstNSI RCATGY 2 cut(s) 648, 1002
BstPI GGTNACC 1 cut(s) 692
BstSCI CCNGG 4 cut(s) 135, 164, 541, 754
BstUI CGCG 1 cut(s) 1144
BstV1I GCAGC 3 cut(s) 264, 612, 1049
BstV2I GAAGAC 3 cut(s) 246, 273, 855
BstX2I RGATCY 1 cut(s) 963
BstXI CCANNNNNNTGG 2 cut(s) 374, 437
BstYI RGATCY 1 cut(s) 963
BsuI GTATCC 1 cut(s) 568
BsuRI GGCC 3 cut(s) 140, 888, 1033
BtgZI GCGATG 1 cut(s) 1125
BtrI CACGTC 2 cut(s) 21, 853
BtsCI GGATG 1 cut(s) 1092
BtsI GCAGTG 1 cut(s) 866
BtsIMutI CAGTG 2 cut(s) 825, 866
Cac8I GCNNGC 3 cut(s) 9, 710, 1035
CciI TCATGA 1 cut(s) 729
CfoI GCGC 1 cut(s) 605
Cfr13I GGNCC 1 cut(s) 887
Csp6I GTAC 3 cut(s) 250, 417, 626
CviAII CATG 4 cut(s) 310, 645, 730, 999
CviQI GTAC 3 cut(s) 250, 417, 626
DdeI CTNAG 3 cut(s) 197, 287, 511
DpnI GATC 2 cut(s) 360, 965
DpnII GATC 2 cut(s) 358, 963
DraIII CACNNNGTG 1 cut(s) 545
EciI GGCGGA 1 cut(s) 169
Eco24I GRGCYC 1 cut(s) 1233
Eco91I GGTNACC 1 cut(s) 692
EcoO65I GGTNACC 1 cut(s) 692
EcoRI GAATTC 2 cut(s) 144, 489
EcoRII CCWGG 3 cut(s) 135, 164, 754
EcoT22I ATGCAT 2 cut(s) 646, 1000
EcoT38I GRGCYC 1 cut(s) 1233
FaeI CATG 4 cut(s) 313, 648, 733, 1002
FaqI GGGAC 1 cut(s) 268
FatI CATG 4 cut(s) 309, 644, 729, 998
Fnu4HI GCNGC 6 cut(s) 278, 601, 713, 1038, 1145, 1217
FokI GGATG 1 cut(s) 1079
FriOI GRGCYC 1 cut(s) 1233
Fsp4HI GCNGC 6 cut(s) 278, 601, 713, 1038, 1145, 1217
FspBI CTAG 6 cut(s) 8, 36, 120, 776, 1029, 1184
GlaI GCGC 1 cut(s) 604
GluI GCNGC 6 cut(s) 278, 601, 713, 1038, 1145, 1217
GsaI CCCAGC 1 cut(s) 893
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 3 cut(s) 140, 888, 1033
HapII CCGG 1 cut(s) 543
HhaI GCGC 1 cut(s) 605
Hin1II CATG 4 cut(s) 313, 648, 733, 1002
Hin6I GCGC 1 cut(s) 603
HinP1I GCGC 1 cut(s) 603
HinfI GANTC 3 cut(s) 242, 269, 988
HpaII CCGG 1 cut(s) 543
HphI GGTGA 4 cut(s) 43, 770, 1018, 1207
Hpy166II GTNNAC 2 cut(s) 626, 795
Hpy188I TCNGA 6 cut(s) 247, 262, 444, 514, 522, 946
Hpy188III TCNNGA 3 cut(s) 730, 1184, 1234
Hpy8I GTNNAC 2 cut(s) 626, 795
Hpy99I CGWCG 2 cut(s) 266, 277
HpyAV CCTTC 4 cut(s) 677, 892, 1192, 1220
HpyCH4III ACNGT 1 cut(s) 836
HpyCH4IV ACGT 2 cut(s) 20, 852
HpyCH4V TGCA 7 cut(s) 26, 565, 644, 767, 973, 998, 1133
HpyF10VI GCNNNNNNNGC 1 cut(s) 721
HpyF3I CTNAG 3 cut(s) 197, 287, 511
HpySE526I ACGT 2 cut(s) 20, 852
Hsp92II CATG 4 cut(s) 313, 648, 733, 1002
HspAI GCGC 1 cut(s) 603
Kzo9I GATC 2 cut(s) 358, 963
LmnI GCTCC 2 cut(s) 4, 340
Lsp1109I GCAGC 3 cut(s) 264, 612, 1049
LweI GCATC 2 cut(s) 631, 1148
MaeI CTAG 6 cut(s) 8, 36, 120, 776, 1029, 1184
MaeII ACGT 2 cut(s) 20, 852
MaeIII GTNAC 2 cut(s) 457, 692
MalI GATC 2 cut(s) 360, 965
MbiI CCGCTC 1 cut(s) 196
MboI GATC 2 cut(s) 358, 963
MfeI CAATTG 1 cut(s) 453
MflI RGATCY 1 cut(s) 963
MhlI GDGCHC 2 cut(s) 924, 1233
MlyI GAGTC 2 cut(s) 236, 263
MmeI TCCRAC 3 cut(s) 173, 285, 552
MnlI CCTC 8 cut(s) 59, 86, 120, 331, 480, 802, 1180, 1186
Mph1103I ATGCAT 2 cut(s) 646, 1000
MseI TTAA 4 cut(s) 612, 666, 750, 1203
MslI CAYNNNNRTG 3 cut(s) 314, 372, 818
MspI CCGG 1 cut(s) 543
MspR9I CCNGG 4 cut(s) 137, 166, 543, 756
MunI CAATTG 1 cut(s) 453
MvaI CCWGG 3 cut(s) 137, 166, 756
MvnI CGCG 1 cut(s) 1144
MwoI GCNNNNNNNGC 1 cut(s) 721
NciI CCSGG 1 cut(s) 543
NdeII GATC 2 cut(s) 358, 963
NheI GCTAGC 1 cut(s) 7
NlaIII CATG 4 cut(s) 313, 648, 733, 1002
NsiI ATGCAT 2 cut(s) 646, 1000
NspI RCATGY 2 cut(s) 648, 1002
PagI TCATGA 1 cut(s) 729
PcsI WCGNNNNNNNCGW 1 cut(s) 109
PfeI GAWTC 1 cut(s) 988
PkrI GCNGC 6 cut(s) 279, 602, 714, 1039, 1146, 1218
PleI GAGTC 2 cut(s) 236, 263
PpsI GAGTC 2 cut(s) 236, 263
PshBI ATTAAT 2 cut(s) 612, 666
Psp6I CCWGG 3 cut(s) 135, 164, 754
PspEI GGTNACC 1 cut(s) 692
PspFI CCCAGC 1 cut(s) 889
PspGI CCWGG 3 cut(s) 135, 164, 754
PspPI GGNCC 1 cut(s) 887
PsuI RGATCY 1 cut(s) 963
RsaI GTAC 3 cut(s) 251, 418, 627
RsaNI GTAC 3 cut(s) 250, 417, 626
RseI CAYNNNNRTG 3 cut(s) 314, 372, 818
SaqAI TTAA 4 cut(s) 612, 666, 750, 1203
SatI GCNGC 6 cut(s) 278, 601, 713, 1038, 1145, 1217
Sau3AI GATC 2 cut(s) 358, 963
Sau96I GGNCC 1 cut(s) 887
ScaI AGTACT 2 cut(s) 251, 418
SchI GAGTC 2 cut(s) 236, 263
ScrFI CCNGG 4 cut(s) 137, 166, 543, 756
SduI GDGCHC 2 cut(s) 924, 1233
SfaNI GCATC 2 cut(s) 631, 1148
SmiMI CAYNNNNRTG 3 cut(s) 314, 372, 818
SsiI CCGC 6 cut(s) 180, 194, 617, 713, 1144, 1216
SspI AATATT 1 cut(s) 664
SspMI CTAG 6 cut(s) 8, 36, 120, 776, 1029, 1184
StyD4I CCNGG 4 cut(s) 135, 164, 541, 754
TaaI ACNGT 1 cut(s) 836
TaiI ACGT 2 cut(s) 23, 855
TaqI TCGA 1 cut(s) 1191
TatI WGTACW 3 cut(s) 249, 416, 625
TauI GCSGC 3 cut(s) 715, 1147, 1219
TfiI GAWTC 1 cut(s) 988
Tru1I TTAA 4 cut(s) 612, 666, 750, 1203
Tru9I TTAA 4 cut(s) 612, 666, 750, 1203
TscAI CASTG 2 cut(s) 825, 866
TseI GCWGC 3 cut(s) 277, 600, 1037
TspDTI ATGAA 5 cut(s) 252, 602, 684, 746, 1239
TspRI CASTG 2 cut(s) 825, 866
VspI ATTAAT 2 cut(s) 612, 666
XapI RAATTY 5 cut(s) 71, 144, 489, 1078, 1260
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 2 cut(s) 648, 1002
XspI CTAG 6 cut(s) 8, 36, 120, 776, 1029, 1184
ZrmI AGTACT 2 cut(s) 251, 418
Zsp2I ATGCAT 2 cut(s) 646, 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.