Rroxscaffold_2G00124270

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000218
Physical Location & Seq
Forward (+)
58520053 .. 58521894
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00124270.1

Sequence Viewer

Length: 1515 bp
ATGGAAACCATCTTCTTCTACACCTCTCTCTCCATCATCGTCTGCGTGTTCATCTCGCTAAAGCTGTTTGGGCGGCGTCGTTACCCCAACCTCCCTCCAAGCCCTTCCTTGTCTCTTCCGATCCTCGGCCACCTCCACCTTCTTAAACCCCCAATCCACCGCACCTTCCACCGCCTCTCGCAGAAACACGGTCCCATCTTCTCCCTCTGGTTCGGCTCCCGCCGCGTCGTCATTATCTCCTCCTCCTCGGCCGTGCAAGAATGCTTCACTAAAAACGACATCGTGTTGGCAAACCGTCCCCCCACGCTCTTAAGCAAGCACTTTGGGTACAACCAAACCGCCTTAGGGGACGCCCCCTACGGCGATCACTGGCGCAACGTTCGTCGTATCGGCACTGTCGAGGTCTTGTCCGCCGGCCAGCTCAACTCGTTCTCCGACATCAGAAAAGTCGAAGTCAAGCATTTGCTGCGCAAGCTTTCCCGACATGCAGAAGAAGAAGAAGAAGGTCGTTTTGTGAAAGTGGAGCTGAGGTCTATGTTGTTTGAGCTGACCTTCAACAACATAATGACCATGGTGGCAGGGAAGAGGTATGTCGGGAACCATGTTGCGAACAAGGAAGAGGGGAAGGAGTTCATTGAGATCATGGATGAGGCTTTTTCGTACAGTGGGGGAACCAACCCCGGAGAATTCATGCCCTTTTTGAGATGGTTTGGCGGTAATGGTTATGAGAGGAAGTTGAAGAAGCTGGGCAGGAGAGCAGATTTGTTCTTGCAGCGTCTAATTGATGAGCACCGGAACAAGAGTGCTTCGGAGAGTAAAAACACCATGATCGACCATTTGCTTTCTCAGCAGGAGTCACAACCTGAGTATTATACTGATGAGATTATCAAAGGGCTTATACTGAGTCTATTATTGGCTGGCACTGACACATCGGCTGTGACAATAGAATGGGCTATGTCTAATTTGCTAAACCATCCGGATGCCTTAGAGAAGGCTAGAGCTGAACTGGATGCTCAACTTGGTCAAGAACGCATAGTAGACGAACCAGACATCTCCAAACTTCACTACCTGCAAAGTATTATCTCCGAGACTCTTCGATTGTACCCTGCGGCACCAATGCTAGTACCGCATTTTGCATCAGATGATTGCATTGTAGGTGGATTTAATATACCACGTGACACATTGGTATTAATCAATGCATGGGCCATACATAGAGATCCGAAGTTGTGGGATGATCCTAAAAGCTTCAAACCTGAGAGGTTTGAAACTGGCAGCAAGGACGAGGCACACAAATTTATGCCATTTGGAATGGGAAGAAGGGCATGCCCCGGAGCAGGATTGGCTCAACGTGAGATTGGCTTGACTTTGGCCTCATTGATTCAATGCTTTGAGTGGGAGAGGGTTAGTAAGGAGGAGGTTGATATGACTGAAGGGACAGGACTCACCATGCCTAAACTGGTACCATTGGAGGCCAAGTACAAACCCCGCTCATTTTTTAACAAGGTTTTCCATTGA

Protein Analysis

504

Amino Acids

57.43

Weight (kDa)

8.42

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 485 1.8e-102 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 470
Acc36I ACCTGC 1 cut(s) 1077
Acc65I GGTACC 1 cut(s) 1459
AccB1I GGYRCC 2 cut(s) 1111, 1459
AccBSI CCGCTC 1 cut(s) 1488
AccI GTMKAC 1 cut(s) 1038
AccII CGCG 1 cut(s) 225
AccIII TCCGGA 1 cut(s) 976
AclI AACGTT 1 cut(s) 378
AclWI GGATC 3 cut(s) 115, 1211, 1229
AcoI YGGCCR 3 cut(s) 127, 249, 415
AcsI RAATTY 2 cut(s) 686, 1292
AcuI CTGAAG 1 cut(s) 1449
AcvI CACGTG 1 cut(s) 1175
AcyI GRCGYC 2 cut(s) 76, 351
AfaI GTAC 6 cut(s) 329, 662, 1103, 1125, 1461, 1478
AfiI CCNNNNNNNGG 3 cut(s) 125, 345, 1334
AflII CTTAAG 1 cut(s) 310
AgsI TTSAA 5 cut(s) 556, 739, 1249, 1265, 1382
AluBI AGCT 8 cut(s) 64, 421, 475, 526, 547, 745, 1001, 1245
AluI AGCT 8 cut(s) 64, 421, 475, 526, 547, 745, 1001, 1245
Alw21I GWGCWC 1 cut(s) 792
Alw26I GTCTC 2 cut(s) 117, 1082
AlwI GGATC 3 cut(s) 115, 1211, 1229
Aor13HI TCCGGA 1 cut(s) 976
AoxI GGCC 6 cut(s) 127, 249, 415, 1203, 1368, 1470
ApeKI GCWGC 3 cut(s) 466, 772, 1272
ApoI RAATTY 2 cut(s) 686, 1292
AseI ATTAAT 1 cut(s) 1190
Asp700I GAANNNNTTC 1 cut(s) 629
Asp718I GGTACC 1 cut(s) 1459
AspLEI GCGC 2 cut(s) 375, 471
AspS9I GGNCC 2 cut(s) 191, 1203
AsuC2I CCSGG 2 cut(s) 681, 1329
AsuHPI GGTGA 1 cut(s) 1435
AvaII GGWCC 1 cut(s) 191
AxyI CCTNAGG 1 cut(s) 343
BanI GGYRCC 2 cut(s) 1111, 1459
BbrPI CACGTG 1 cut(s) 1175
Bbv12I GWGCWC 1 cut(s) 792
BbvCI CCTCAGC 1 cut(s) 527
BbvI GCAGC 3 cut(s) 453, 784, 1284
BccI CCATC 5 cut(s) 17, 41, 203, 699, 981
BceAI ACGGC 2 cut(s) 236, 376
BcnI CCSGG 2 cut(s) 681, 1329
BcoDI GTCTC 2 cut(s) 117, 1082
BfaI CTAG 2 cut(s) 996, 1121
BfrI CTTAAG 1 cut(s) 310
BfuAI ACCTGC 1 cut(s) 1077
BisI GCNGC 6 cut(s) 74, 223, 467, 773, 1110, 1273
BlsI GCNGC 6 cut(s) 75, 224, 468, 774, 1111, 1274
Bme1390I CCNGG 2 cut(s) 681, 1329
Bme18I GGWCC 1 cut(s) 191
BmgT120I GGNCC 2 cut(s) 191, 1203
BmiI GGNNCC 6 cut(s) 193, 217, 599, 673, 1113, 1461
BmrFI CCNGG 2 cut(s) 681, 1329
BmsI GCATC 3 cut(s) 970, 1000, 1145
Bpu10I CCTNAGC 1 cut(s) 527
BpuMI CCSGG 2 cut(s) 681, 1329
BsaAI YACGTR 1 cut(s) 1175
BsaHI GRCGYC 2 cut(s) 76, 351
BsaJI CCNNGG 5 cut(s) 124, 246, 570, 679, 1327
BsaWI WCCGGW 2 cut(s) 792, 976
BsaXI ACNNNNNCTCC 6 cut(s) 416, 446, 515, 545, 1460, 1490
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 345, 1334
Bse118I RCCGGY 1 cut(s) 413
Bse1I ACTGG 4 cut(s) 374, 1011, 1273, 1461
Bse21I CCTNAGG 1 cut(s) 343
BseAI TCCGGA 1 cut(s) 976
BseDI CCNNGG 5 cut(s) 124, 246, 570, 679, 1327
BseGI GGATG 5 cut(s) 652, 973, 985, 1015, 1237
BseLI CCNNNNNNNGG 3 cut(s) 125, 345, 1334
BseMII CTCAG 5 cut(s) 518, 855, 860, 893, 1245
BseNI ACTGG 4 cut(s) 374, 1011, 1273, 1461
BseRI GAGGAG 4 cut(s) 229, 232, 235, 1427
BseX3I CGGCCG 1 cut(s) 249
BseXI GCAGC 3 cut(s) 453, 784, 1284
BseYI CCCAGC 1 cut(s) 745
Bsh1236I CGCG 1 cut(s) 225
Bsh1285I CGRYCG 1 cut(s) 252
BshFI GGCC 6 cut(s) 129, 251, 417, 1205, 1370, 1472
BshNI GGYRCC 2 cut(s) 1111, 1459
BsiEI CGRYCG 1 cut(s) 252
BsiHKAI GWGCWC 1 cut(s) 792
BsiSI CCGG 5 cut(s) 414, 681, 793, 977, 1329
BslFI GGGAC 4 cut(s) 177, 282, 362, 1447
BslI CCNNNNNNNGG 3 cut(s) 125, 345, 1334
BsmAI GTCTC 2 cut(s) 117, 1082
BsmFI GGGAC 4 cut(s) 177, 282, 362, 1447
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 6 cut(s) 129, 251, 417, 1205, 1370, 1472
Bsp1286I GDGCHC 1 cut(s) 792
Bsp13I TCCGGA 1 cut(s) 976
Bsp143I GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
Bsp19I CCATGG 1 cut(s) 570
BspANI GGCC 6 cut(s) 129, 251, 417, 1205, 1370, 1472
BspCNI CTCAG 5 cut(s) 519, 856, 859, 894, 1246
BspEI TCCGGA 1 cut(s) 976
BspFNI CGCG 1 cut(s) 225
BspLI GGNNCC 6 cut(s) 193, 217, 599, 673, 1113, 1461
BspMI ACCTGC 1 cut(s) 1077
BspPI GGATC 3 cut(s) 115, 1211, 1229
BspT107I GGYRCC 2 cut(s) 1111, 1459
BspTI CTTAAG 1 cut(s) 310
BsrBI CCGCTC 1 cut(s) 1488
BsrFI RCCGGY 1 cut(s) 413
BsrI ACTGG 4 cut(s) 374, 1011, 1273, 1461
BssAI RCCGGY 1 cut(s) 413
BssECI CCNNGG 5 cut(s) 124, 246, 570, 679, 1327
BssMI GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
BssNI GRCGYC 2 cut(s) 76, 351
BssT1I CCWWGG 1 cut(s) 570
Bst4CI ACNGT 4 cut(s) 191, 296, 397, 665
Bst6I CTCTTC 4 cut(s) 120, 578, 612, 1098
BstACI GRCGYC 2 cut(s) 76, 351
BstAFI CTTAAG 1 cut(s) 310
BstAPI GCANNNNNTGC 1 cut(s) 466
BstBAI YACGTR 1 cut(s) 1175
BstC8I GCNNGC 6 cut(s) 317, 415, 419, 473, 919, 1324
BstDEI CTNAG 7 cut(s) 343, 527, 846, 864, 902, 985, 1254
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 5 cut(s) 652, 973, 985, 1015, 1237
BstFNI CGCG 1 cut(s) 225
BstHHI GCGC 2 cut(s) 375, 471
BstKTI GATC 6 cut(s) 123, 367, 642, 831, 1219, 1237
BstMAI GTCTC 2 cut(s) 117, 1082
BstMBI GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
BstMCI CGRYCG 1 cut(s) 252
BstMWI GCNNNNNNNGC 7 cut(s) 70, 222, 466, 472, 847, 1126, 1340
BstNSI RCATGY 2 cut(s) 488, 1326
BstSCI CCNGG 2 cut(s) 679, 1327
BstUI CGCG 1 cut(s) 225
BstV1I GCAGC 3 cut(s) 453, 784, 1284
BstX2I RGATCY 1 cut(s) 1216
BstYI RGATCY 1 cut(s) 1216
BstZI CGGCCG 1 cut(s) 249
Bsu36I CCTNAGG 1 cut(s) 343
BsuRI GGCC 6 cut(s) 129, 251, 417, 1205, 1370, 1472
BtgI CCRYGG 1 cut(s) 570
BtsCI GGATG 5 cut(s) 652, 973, 985, 1015, 1237
BtsIMutI CAGTG 4 cut(s) 367, 393, 670, 921
BveI ACCTGC 1 cut(s) 1077
Cac8I GCNNGC 6 cut(s) 317, 415, 419, 473, 919, 1324
CfoI GCGC 2 cut(s) 375, 471
Cfr10I RCCGGY 1 cut(s) 413
Cfr13I GGNCC 2 cut(s) 191, 1203
CseI GACGC 4 cut(s) 65, 214, 359, 764
Csp6I GTAC 6 cut(s) 328, 661, 1102, 1124, 1460, 1477
CviAII CATG 9 cut(s) 485, 571, 602, 643, 691, 826, 1200, 1323, 1447
CviQI GTAC 6 cut(s) 328, 661, 1102, 1124, 1460, 1477
DdeI CTNAG 7 cut(s) 343, 527, 846, 864, 902, 985, 1254
DpnI GATC 6 cut(s) 122, 366, 641, 830, 1218, 1236
DpnII GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
EaeI YGGCCR 3 cut(s) 127, 249, 415
EagI CGGCCG 1 cut(s) 249
Eam1104I CTCTTC 4 cut(s) 120, 578, 612, 1098
EarI CTCTTC 4 cut(s) 120, 578, 612, 1098
EciI GGCGGA 1 cut(s) 400
EclXI CGGCCG 1 cut(s) 249
Eco130I CCWWGG 1 cut(s) 570
Eco47I GGWCC 1 cut(s) 191
Eco52I CGGCCG 1 cut(s) 249
Eco57I CTGAAG 1 cut(s) 1449
Eco72I CACGTG 1 cut(s) 1175
Eco81I CCTNAGG 1 cut(s) 343
EcoRI GAATTC 1 cut(s) 686
EcoT14I CCWWGG 1 cut(s) 570
EcoT22I ATGCAT 1 cut(s) 1201
ErhI CCWWGG 1 cut(s) 570
FaeI CATG 9 cut(s) 488, 574, 605, 646, 694, 829, 1203, 1326, 1450
FaqI GGGAC 4 cut(s) 177, 282, 362, 1447
FatI CATG 9 cut(s) 484, 570, 601, 642, 690, 825, 1199, 1322, 1446
FauI CCCGC 2 cut(s) 227, 1493
FblI GTMKAC 1 cut(s) 1038
Fnu4HI GCNGC 6 cut(s) 74, 223, 467, 773, 1110, 1273
FokI GGATG 5 cut(s) 659, 960, 992, 1022, 1244
Fsp4HI GCNGC 6 cut(s) 74, 223, 467, 773, 1110, 1273
FspBI CTAG 2 cut(s) 996, 1121
FspI TGCGCA 1 cut(s) 470
GlaI GCGC 2 cut(s) 374, 470
GluI GCNGC 6 cut(s) 74, 223, 467, 773, 1110, 1273
GsaI CCCAGC 1 cut(s) 749
HaeIII GGCC 6 cut(s) 129, 251, 417, 1205, 1370, 1472
HapII CCGG 5 cut(s) 414, 681, 793, 977, 1329
HgaI GACGC 4 cut(s) 65, 214, 359, 764
HhaI GCGC 2 cut(s) 375, 471
Hin1I GRCGYC 2 cut(s) 76, 351
Hin1II CATG 9 cut(s) 488, 574, 605, 646, 694, 829, 1203, 1326, 1450
Hin6I GCGC 2 cut(s) 373, 469
HinP1I GCGC 2 cut(s) 373, 469
HindIII AAGCTT 2 cut(s) 473, 1243
HinfI GANTC 5 cut(s) 854, 904, 1090, 1378, 1440
HpaII CCGG 5 cut(s) 414, 681, 793, 977, 1329
HphI GGTGA 1 cut(s) 1435
Hpy166II GTNNAC 1 cut(s) 1039
Hpy188I TCNGA 7 cut(s) 120, 436, 443, 811, 1087, 1141, 1221
Hpy188III TCNNGA 4 cut(s) 480, 595, 977, 1025
Hpy8I GTNNAC 1 cut(s) 1039
Hpy99I CGWCG 3 cut(s) 81, 230, 387
HpyAV CCTTC 9 cut(s) 114, 149, 175, 497, 562, 619, 985, 1311, 1424
HpyCH4III ACNGT 4 cut(s) 191, 296, 397, 665
HpyCH4IV ACGT 3 cut(s) 378, 1174, 1348
HpyCH4V TGCA 7 cut(s) 256, 488, 772, 1072, 1136, 1149, 1199
HpyF10VI GCNNNNNNNGC 7 cut(s) 70, 222, 466, 472, 847, 1126, 1340
HpyF3I CTNAG 7 cut(s) 343, 527, 846, 864, 902, 985, 1254
HpySE526I ACGT 3 cut(s) 378, 1174, 1348
Hsp92I GRCGYC 2 cut(s) 76, 351
Hsp92II CATG 9 cut(s) 488, 574, 605, 646, 694, 829, 1203, 1326, 1450
HspAI GCGC 2 cut(s) 373, 469
Kpn2I TCCGGA 1 cut(s) 976
KpnI GGTACC 1 cut(s) 1463
KroI GCCGGC 1 cut(s) 413
KroNI GCCGGC 1 cut(s) 415
Kzo9I GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
LmnI GCTCC 3 cut(s) 221, 523, 1331
Lsp1109I GCAGC 3 cut(s) 453, 784, 1284
LweI GCATC 3 cut(s) 970, 1000, 1145
MaeI CTAG 2 cut(s) 996, 1121
MaeII ACGT 3 cut(s) 378, 1174, 1348
MaeIII GTNAC 4 cut(s) 80, 855, 937, 1175
MalI GATC 6 cut(s) 122, 366, 641, 830, 1218, 1236
MbiI CCGCTC 1 cut(s) 1488
MboI GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
MflI RGATCY 1 cut(s) 1216
MhlI GDGCHC 1 cut(s) 792
MluCI AATT 4 cut(s) 686, 780, 961, 1292
MlyI GAGTC 4 cut(s) 863, 913, 1084, 1434
MmeI TCCRAC 1 cut(s) 459
Mph1103I ATGCAT 1 cut(s) 1201
MroI TCCGGA 1 cut(s) 976
MroNI GCCGGC 1 cut(s) 413
MroXI GAANNNNTTC 1 cut(s) 629
MseI TTAA 5 cut(s) 144, 311, 1164, 1190, 1497
MslI CAYNNNNRTG 1 cut(s) 978
MspCI CTTAAG 1 cut(s) 310
MspI CCGG 5 cut(s) 414, 681, 793, 977, 1329
MspR9I CCNGG 2 cut(s) 681, 1329
Mva1269I GAATGC 1 cut(s) 266
MvnI CGCG 1 cut(s) 225
MwoI GCNNNNNNNGC 7 cut(s) 70, 222, 466, 472, 847, 1126, 1340
NaeI GCCGGC 1 cut(s) 415
NciI CCSGG 2 cut(s) 681, 1329
NcoI CCATGG 1 cut(s) 570
NdeII GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
NgoMIV GCCGGC 1 cut(s) 413
NlaIII CATG 9 cut(s) 488, 574, 605, 646, 694, 829, 1203, 1326, 1450
NlaIV GGNNCC 6 cut(s) 193, 217, 599, 673, 1113, 1461
NmeAIII GCCGAG 2 cut(s) 105, 227
NmuCI GTSAC 3 cut(s) 855, 937, 1175
NsbI TGCGCA 1 cut(s) 470
NsiI ATGCAT 1 cut(s) 1201
NspI RCATGY 2 cut(s) 488, 1326
PaeI GCATGC 1 cut(s) 1326
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PctI GAATGC 1 cut(s) 266
PdiI GCCGGC 1 cut(s) 415
PdmI GAANNNNTTC 1 cut(s) 629
PfeI GAWTC 1 cut(s) 1378
PkrI GCNGC 6 cut(s) 75, 224, 468, 774, 1111, 1274
PleI GAGTC 4 cut(s) 862, 912, 1084, 1434
PmaCI CACGTG 1 cut(s) 1175
PmlI CACGTG 1 cut(s) 1175
PpsI GAGTC 4 cut(s) 862, 912, 1084, 1434
Ppu21I YACGTR 1 cut(s) 1175
PshBI ATTAAT 1 cut(s) 1190
Psp1406I AACGTT 1 cut(s) 378
PspCI CACGTG 1 cut(s) 1175
PspFI CCCAGC 1 cut(s) 745
PspN4I GGNNCC 6 cut(s) 193, 217, 599, 673, 1113, 1461
PspPI GGNCC 2 cut(s) 191, 1203
PsuI RGATCY 1 cut(s) 1216
RsaI GTAC 6 cut(s) 329, 662, 1103, 1125, 1461, 1478
RsaNI GTAC 6 cut(s) 328, 661, 1102, 1124, 1460, 1477
RseI CAYNNNNRTG 1 cut(s) 978
SaqAI TTAA 5 cut(s) 144, 311, 1164, 1190, 1497
SatI GCNGC 6 cut(s) 74, 223, 467, 773, 1110, 1273
Sau3AI GATC 6 cut(s) 120, 364, 639, 828, 1216, 1234
Sau96I GGNCC 2 cut(s) 191, 1203
SchI GAGTC 4 cut(s) 863, 913, 1084, 1434
ScrFI CCNGG 2 cut(s) 681, 1329
SduI GDGCHC 1 cut(s) 792
SfaNI GCATC 3 cut(s) 970, 1000, 1145
SinI GGWCC 1 cut(s) 191
SmiMI CAYNNNNRTG 1 cut(s) 978
SmlI CTYRAG 1 cut(s) 310
SmoI CTYRAG 1 cut(s) 310
SphI GCATGC 1 cut(s) 1326
Sse9I AATT 4 cut(s) 686, 780, 961, 1292
SspMI CTAG 2 cut(s) 996, 1121
StyD4I CCNGG 2 cut(s) 679, 1327
StyI CCWWGG 1 cut(s) 570
TaaI ACNGT 4 cut(s) 191, 296, 397, 665
TaiI ACGT 3 cut(s) 381, 1177, 1351
TaqI TCGA 4 cut(s) 399, 450, 831, 1096
TasI AATT 4 cut(s) 686, 780, 961, 1292
TatI WGTACW 1 cut(s) 1476
TauI GCSGC 3 cut(s) 76, 225, 1112
TfiI GAWTC 1 cut(s) 1378
Tru1I TTAA 5 cut(s) 144, 311, 1164, 1190, 1497
Tru9I TTAA 5 cut(s) 144, 311, 1164, 1190, 1497
TscAI CASTG 4 cut(s) 374, 400, 670, 928
TseFI GTSAC 3 cut(s) 855, 937, 1175
TseI GCWGC 3 cut(s) 466, 772, 1272
Tsp45I GTSAC 3 cut(s) 855, 937, 1175
TspDTI ATGAA 3 cut(s) 40, 622, 679
TspRI CASTG 4 cut(s) 374, 400, 670, 928
Vha464I CTTAAG 1 cut(s) 310
VpaK11BI GGWCC 1 cut(s) 191
VspI ATTAAT 1 cut(s) 1190
XapI RAATTY 2 cut(s) 686, 1292
XceI RCATGY 2 cut(s) 488, 1326
XcmI CCANNNNNNNNNTGG 1 cut(s) 1453
XmiI GTMKAC 1 cut(s) 1038
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 2 cut(s) 996, 1121
Zsp2I ATGCAT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.