MD03G1281500.v1.1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000218
Physical Location & Seq
Forward (+)
36239416 .. 36241840
2425 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1281500.v1.1.491

Sequence Viewer

Length: 1572 bp
ATGAAACCACATCCAAATAAAAACTCAACAAAATTTCAACCATTCATTAAGCAAACCAAAGCGCACAAAACCATGGAAGACATCTTGTTCTATACATCCCTCTCTCTTATCTTCATTCTCTTCACTTTCAAGTTTTTCCTCCAAACCAACCGTAACAATCACCAAAACCTCCCACCAAGCCCACCTTCTCTTCCAATCATCGGCCACCTCCATCTCCTAAAACCCCCAGTCCACCGAATCTTCCGTCGCCTCTCCCAAAAATACGGCCCCGTCTTCTCTCTCTGGTTCGGCTCACGCCGCGTGGTCATAGTCTCATCCTCATCCGTTGTCCAAGAATGTTTTACAACAAACGACATTGTCTTAGCAAACCGTCCTCGACTGATCATGGGAAAGCACTTGGCCTACAACTACACCAACATAGCGGCGTCCTCATACGGCGACCACTGGCGCAACCTACGCCGCATTGGCGCCGTCGAGATCTTTTCTTCCGCTCGACTCAACACGTTCTCAGACATCCGAAAGGACGAGGTGAGACATTTACTTGTTAAACTCTCACAAAACGCACGCAATGGTTTTGCAAAGGTGGAGCTCAAGTCAATGCTCAATGAGCTGACGTTTAACATCATAATGAGAATGGTGGCTGGGAAGAGGTACTACGGTGATGACGTGTCGGTGGACAAAGAGGAGGCGAGGGAGTTTAGAGAGATTATGAGGGATGCGTTTGCTTATGGCGGGGCTGCGAACCCAGCTGATTTTTTGCCGGTTTTGAATTGGTTTGGGGTTAATGGTTACGAGAAGAAGGTGAAGGCGTTGGCTAAGAGGGCGGATGTGTTCTTGCAGGGTCTCATTGATGAGCGCAGGAGCAAAGGAAGAAATGGCAGTAGTATGATCGACCATTTGCTTTCCCTGCAGGAGTCACAGCCTGAATACTACACTGACCAAATCATCAAGGGTCTTATTATGGTCATGTTATTGGCGGGTACTGACACATCAGCTGTGACACTGGAATGGGCCATGTCCAATCTACTTAACCATCCACGCGTGCTCCAAAAGGCCAAATCTGAACTAGATGCTAAAGTTGGTAAAGAAAACTTGGTGGATGAACCAGACATCTCCAAACTACCCTACCTACAAAGCATCATCTCCGAGACGCTCCGATTATGCCCGGCGGCTCCATTGCTACTACCACATTTCACATCTGATGATTGTATTATCGGAGGCTTTGACGTGCCACGTGACACAATGGTATTGGTCAATGCATGGGCGGTACACAGAGATCCTGAATTGTGGGATGAACCTGAAAGCTTTAAGCCTGAGAGGTTCGAAAGTGGTGAAGATTTTTCACATAAACTCATTCCATTTGGAATGGGAAGAAGGGCTTGCCCTGGAGCAGGCCTAGCGCAGCGTGTGGTGGGATTGACTTTGGGGTCATTGATTCAATGCTTCGACTGGAATAGAGTGGGTGAGGAAATGGTTGACATGACTGAGGGCAAGGGACTCACAGCACCTAAAGCCATTCCATTGGAGGCTATGTGTAAAGCACGAATTATTGTGAGCAAGGTTTTATCTTAA

Protein Analysis

524

Amino Acids

59.15

Weight (kDa)

9.21

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 58 - 501 4.3e-95 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1426
AccB1I GGYRCC 1 cut(s) 467
AccBSI CCGCTC 1 cut(s) 491
AccII CGCG 2 cut(s) 300, 1041
AciI CCGC 9 cut(s) 298, 422, 460, 489, 732, 824, 977, 1169, 1265
AclWI GGATC 1 cut(s) 1271
AcoI YGGCCR 1 cut(s) 202
AcsI RAATTY 1 cut(s) 32
AcvI CACGTG 1 cut(s) 1235
AcyI GRCGYC 2 cut(s) 425, 468
AfaI GTAC 3 cut(s) 653, 982, 1269
AfiI CCNNNNNNNGG 2 cut(s) 200, 1391
AflIII ACRYGT 3 cut(s) 501, 666, 1039
AgsI TTSAA 4 cut(s) 38, 130, 769, 1439
AjiI CACGTC 2 cut(s) 667, 1228
AjnI CCWGG 1 cut(s) 1384
AjuI GAANNNNNNNTTGG 2 cut(s) 169, 201
AluBI AGCT 5 cut(s) 589, 610, 749, 995, 1305
AluI AGCT 5 cut(s) 589, 610, 749, 995, 1305
Alw21I GWGCWC 2 cut(s) 591, 1047
Alw26I GTCTC 4 cut(s) 316, 526, 848, 1142
AlwI GGATC 1 cut(s) 1271
AoxI GGCC 6 cut(s) 202, 265, 399, 1011, 1053, 1393
ApeKI GCWGC 2 cut(s) 737, 1402
ApoI RAATTY 1 cut(s) 32
ArsI GACNNNNNNTTYG 2 cut(s) 229, 261
AspLEI GCGC 5 cut(s) 64, 450, 470, 858, 1402
AspS9I GGNCC 2 cut(s) 266, 1011
AsuC2I CCSGG 1 cut(s) 1166
AsuHPI GGTGA 6 cut(s) 152, 541, 671, 814, 1343, 1475
AsuII TTCGAA 1 cut(s) 1323
BaeI ACNNNNGTAYC 2 cut(s) 643, 676
BanI GGYRCC 1 cut(s) 467
BanII GRGCYC 1 cut(s) 591
BarI GAAGNNNNNNTAC 2 cut(s) 638, 670
BbrPI CACGTG 1 cut(s) 1235
BbsI GAAGAC 2 cut(s) 84, 265
Bbv12I GWGCWC 2 cut(s) 591, 1047
BbvI GCAGC 2 cut(s) 724, 1414
BccI CCATC 2 cut(s) 219, 1041
BceAI ACGGC 3 cut(s) 280, 451, 455
BciT130I CCWGG 1 cut(s) 1386
BclI TGATCA 1 cut(s) 381
BcnI CCSGG 1 cut(s) 1166
BcoDI GTCTC 4 cut(s) 316, 526, 848, 1142
BfaI CTAG 2 cut(s) 1067, 1397
BfmI CTRYAG 1 cut(s) 908
BfoI RGCGCY 1 cut(s) 471
BglI GCCNNNNNGGC 1 cut(s) 465
BglII AGATCT 1 cut(s) 477
BisI GCNGC 6 cut(s) 298, 423, 460, 738, 1170, 1403
BlsI GCNGC 6 cut(s) 299, 424, 461, 739, 1171, 1404
Bme1390I CCNGG 2 cut(s) 1166, 1386
BmgBI CACGTC 2 cut(s) 667, 1228
BmgT120I GGNCC 2 cut(s) 266, 1011
BmiI GGNNCC 3 cut(s) 268, 469, 1173
BmrFI CCNGG 2 cut(s) 1166, 1386
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 3 cut(s) 706, 1060, 1146
BmuI ACTGGG 1 cut(s) 221
BpiI GAAGAC 2 cut(s) 84, 265
BpmI CTGGAG 1 cut(s) 1407
Bpu14I TTCGAA 1 cut(s) 1323
BpuEI CTTGAG 1 cut(s) 575
BpuMI CCSGG 1 cut(s) 1166
BsaAI YACGTR 1 cut(s) 1235
BsaHI GRCGYC 2 cut(s) 425, 468
BsaI GGTCTC 1 cut(s) 848
BsaJI CCNNGG 2 cut(s) 72, 1384
BsaXI ACNNNNNCTCC 6 cut(s) 578, 608, 1029, 1059, 1517, 1547
Bsc4I CCNNNNNNNGG 2 cut(s) 200, 1391
Bse118I RCCGGY 1 cut(s) 760
Bse1I ACTGG 4 cut(s) 227, 449, 1008, 1454
Bse3DI GCAATG 2 cut(s) 574, 1175
BseBI CCWGG 1 cut(s) 1386
BseDI CCNNGG 2 cut(s) 72, 1384
BseLI CCNNNNNNNGG 2 cut(s) 200, 1391
BseMI GCAATG 2 cut(s) 574, 1175
BseMII CTCAG 3 cut(s) 522, 1305, 1476
BseNI ACTGG 4 cut(s) 227, 449, 1008, 1454
BseRI GAGGAG 1 cut(s) 698
BseXI GCAGC 2 cut(s) 724, 1414
BseYI CCCAGC 2 cut(s) 641, 745
Bsh1236I CGCG 2 cut(s) 300, 1041
BshFI GGCC 6 cut(s) 204, 267, 401, 1013, 1055, 1395
BshNI GGYRCC 1 cut(s) 467
BsiHKAI GWGCWC 2 cut(s) 591, 1047
BsiSI CCGG 2 cut(s) 761, 1166
BslFI GGGAC 1 cut(s) 1509
BslI CCNNNNNNNGG 2 cut(s) 200, 1391
BsmAI GTCTC 4 cut(s) 316, 526, 848, 1142
BsmBI CGTCTC 1 cut(s) 1142
BsmFI GGGAC 1 cut(s) 1509
BsnI GGCC 6 cut(s) 204, 267, 401, 1013, 1055, 1395
Bso31I GGTCTC 1 cut(s) 848
Bsp119I TTCGAA 1 cut(s) 1323
Bsp1286I GDGCHC 2 cut(s) 591, 1047
Bsp143I GATC 4 cut(s) 381, 477, 888, 1276
Bsp19I CCATGG 1 cut(s) 72
BspACI CCGC 9 cut(s) 298, 422, 460, 489, 732, 824, 977, 1169, 1265
BspANI GGCC 6 cut(s) 204, 267, 401, 1013, 1055, 1395
BspCNI CTCAG 3 cut(s) 521, 1306, 1477
BspFNI CGCG 2 cut(s) 300, 1041
BspLI GGNNCC 3 cut(s) 268, 469, 1173
BspMAI CTGCAG 1 cut(s) 912
BspPI GGATC 1 cut(s) 1271
BspT104I TTCGAA 1 cut(s) 1323
BspT107I GGYRCC 1 cut(s) 467
BspTNI GGTCTC 1 cut(s) 848
BsrBI CCGCTC 1 cut(s) 491
BsrDI GCAATG 2 cut(s) 574, 1175
BsrFI RCCGGY 1 cut(s) 760
BsrI ACTGG 4 cut(s) 227, 449, 1008, 1454
BssAI RCCGGY 1 cut(s) 760
BssECI CCNNGG 2 cut(s) 72, 1384
BssMI GATC 4 cut(s) 381, 477, 888, 1276
BssNI GRCGYC 2 cut(s) 425, 468
BssT1I CCWWGG 1 cut(s) 72
Bst2UI CCWGG 1 cut(s) 1386
Bst4CI ACNGT 3 cut(s) 152, 371, 659
Bst6I CTCTTC 3 cut(s) 125, 195, 641
BstACI GRCGYC 2 cut(s) 425, 468
BstBAI YACGTR 1 cut(s) 1235
BstBI TTCGAA 1 cut(s) 1323
BstC8I GCNNGC 4 cut(s) 565, 1043, 1381, 1393
BstDEI CTNAG 5 cut(s) 361, 508, 816, 1314, 1485
BstDSI CCRYGG 1 cut(s) 72
BstENI CCTNNNNNAGG 1 cut(s) 1389
BstFNI CGCG 2 cut(s) 300, 1041
BstH2I RGCGCY 1 cut(s) 471
BstHHI GCGC 5 cut(s) 64, 450, 470, 858, 1402
BstKTI GATC 4 cut(s) 384, 480, 891, 1279
BstMAI GTCTC 4 cut(s) 316, 526, 848, 1142
BstMBI GATC 4 cut(s) 381, 477, 888, 1276
BstMWI GCNNNNNNNGC 9 cut(s) 297, 456, 465, 607, 746, 821, 907, 1397, 1511
BstNI CCWGG 1 cut(s) 1386
BstSCI CCNGG 2 cut(s) 1164, 1384
BstSFI CTRYAG 1 cut(s) 908
BstUI CGCG 2 cut(s) 300, 1041
BstV1I GCAGC 2 cut(s) 724, 1414
BstV2I GAAGAC 2 cut(s) 84, 265
BstX2I RGATCY 2 cut(s) 477, 1276
BstXI CCANNNNNNTGG 1 cut(s) 1522
BstYI RGATCY 2 cut(s) 477, 1276
BsuRI GGCC 6 cut(s) 204, 267, 401, 1013, 1055, 1395
BtgI CCRYGG 1 cut(s) 72
BtrI CACGTC 2 cut(s) 667, 1228
BtsIMutI CAGTG 3 cut(s) 442, 933, 1001
Cac8I GCNNGC 4 cut(s) 565, 1043, 1381, 1393
CfoI GCGC 5 cut(s) 64, 450, 470, 858, 1402
Cfr10I RCCGGY 1 cut(s) 760
Cfr13I GGNCC 2 cut(s) 266, 1011
CseI GACGC 2 cut(s) 414, 1159
Csp6I GTAC 3 cut(s) 652, 981, 1268
CviAII CATG 6 cut(s) 73, 385, 967, 1015, 1260, 1480
CviQI GTAC 3 cut(s) 652, 981, 1268
DdeI CTNAG 5 cut(s) 361, 508, 816, 1314, 1485
DinI GGCGCC 1 cut(s) 469
DpnI GATC 4 cut(s) 383, 479, 890, 1278
DpnII GATC 4 cut(s) 381, 477, 888, 1276
DrdI GACNNNNNNGTC 1 cut(s) 1426
DseDI GACNNNNNNGTC 1 cut(s) 1426
EaeI YGGCCR 1 cut(s) 202
Eam1104I CTCTTC 3 cut(s) 125, 195, 641
EarI CTCTTC 3 cut(s) 125, 195, 641
EciI GGCGGA 1 cut(s) 839
Ecl136II GAGCTC 1 cut(s) 589
Eco130I CCWWGG 1 cut(s) 72
Eco147I AGGCCT 1 cut(s) 1395
Eco24I GRGCYC 1 cut(s) 591
Eco31I GGTCTC 1 cut(s) 848
Eco53kI GAGCTC 1 cut(s) 589
Eco72I CACGTG 1 cut(s) 1235
EcoICRI GAGCTC 1 cut(s) 589
EcoNI CCTNNNNNAGG 1 cut(s) 1389
EcoRII CCWGG 1 cut(s) 1384
EcoT14I CCWWGG 1 cut(s) 72
EcoT22I ATGCAT 1 cut(s) 1261
EcoT38I GRGCYC 1 cut(s) 591
EgeI GGCGCC 1 cut(s) 469
EheI GGCGCC 1 cut(s) 469
ErhI CCWWGG 1 cut(s) 72
Esp3I CGTCTC 1 cut(s) 1142
FaeI CATG 6 cut(s) 76, 388, 970, 1018, 1263, 1483
FalI AAGNNNNNCTT 4 cut(s) 169, 201, 1363, 1395
FaqI GGGAC 1 cut(s) 1509
FatI CATG 6 cut(s) 72, 384, 966, 1014, 1259, 1479
FauI CCCGC 2 cut(s) 725, 970
FbaI TGATCA 1 cut(s) 381
Fnu4HI GCNGC 6 cut(s) 298, 423, 460, 738, 1170, 1403
FokI GGATG 9 cut(s) 82, 301, 307, 500, 728, 839, 1020, 1112, 1304
FriOI GRGCYC 1 cut(s) 591
Fsp4HI GCNGC 6 cut(s) 298, 423, 460, 738, 1170, 1403
FspBI CTAG 2 cut(s) 1067, 1397
GlaI GCGC 5 cut(s) 63, 449, 469, 857, 1401
GluI GCNGC 6 cut(s) 298, 423, 460, 738, 1170, 1403
GsaI CCCAGC 2 cut(s) 645, 749
GsuI CTGGAG 1 cut(s) 1407
HaeII RGCGCY 1 cut(s) 471
HaeIII GGCC 6 cut(s) 204, 267, 401, 1013, 1055, 1395
HapII CCGG 2 cut(s) 761, 1166
HgaI GACGC 2 cut(s) 414, 1159
HhaI GCGC 5 cut(s) 64, 450, 470, 858, 1402
Hin1I GRCGYC 2 cut(s) 425, 468
Hin1II CATG 6 cut(s) 76, 388, 970, 1018, 1263, 1483
Hin6I GCGC 5 cut(s) 62, 448, 468, 856, 1400
HinP1I GCGC 5 cut(s) 62, 448, 468, 856, 1400
HincII GTYRAC 1 cut(s) 1477
HindII GTYRAC 1 cut(s) 1477
HindIII AAGCTT 1 cut(s) 1303
HinfI GANTC 5 cut(s) 237, 495, 914, 1435, 1497
HpaII CCGG 2 cut(s) 761, 1166
HphI GGTGA 6 cut(s) 152, 541, 671, 814, 1343, 1475
Hpy166II GTNNAC 4 cut(s) 232, 676, 1270, 1477
Hpy188I TCNGA 7 cut(s) 511, 518, 1063, 1147, 1157, 1201, 1217
Hpy188III TCNNGA 2 cut(s) 475, 1280
Hpy8I GTNNAC 4 cut(s) 232, 676, 1270, 1477
Hpy99I CGWCG 2 cut(s) 249, 476
HpyAV CCTTC 4 cut(s) 195, 793, 799, 1368
HpyCH4III ACNGT 3 cut(s) 152, 371, 659
HpyCH4IV ACGT 5 cut(s) 503, 614, 666, 1227, 1234
HpyCH4V TGCA 4 cut(s) 578, 838, 910, 1259
HpyF10VI GCNNNNNNNGC 9 cut(s) 297, 456, 465, 607, 746, 821, 907, 1397, 1511
HpyF3I CTNAG 5 cut(s) 361, 508, 816, 1314, 1485
HpySE526I ACGT 5 cut(s) 503, 614, 666, 1227, 1234
Hsp92I GRCGYC 2 cut(s) 425, 468
Hsp92II CATG 6 cut(s) 76, 388, 970, 1018, 1263, 1483
HspAI GCGC 5 cut(s) 62, 448, 468, 856, 1400
KasI GGCGCC 1 cut(s) 467
Ksp22I TGATCA 1 cut(s) 381
Kzo9I GATC 4 cut(s) 381, 477, 888, 1276
LmnI GCTCC 6 cut(s) 586, 861, 1050, 1158, 1177, 1388
Lsp1109I GCAGC 2 cut(s) 724, 1414
LweI GCATC 3 cut(s) 706, 1060, 1146
MaeI CTAG 2 cut(s) 1067, 1397
MaeII ACGT 5 cut(s) 503, 614, 666, 1227, 1234
MaeIII GTNAC 5 cut(s) 152, 788, 915, 997, 1235
MalI GATC 4 cut(s) 383, 479, 890, 1278
MbiI CCGCTC 1 cut(s) 491
MboI GATC 4 cut(s) 381, 477, 888, 1276
MflI RGATCY 2 cut(s) 477, 1276
MhlI GDGCHC 2 cut(s) 591, 1047
MluCI AATT 4 cut(s) 32, 769, 1283, 1545
MluI ACGCGT 1 cut(s) 1039
Mly113I GGCGCC 1 cut(s) 468
MlyI GAGTC 3 cut(s) 489, 923, 1491
Mph1103I ATGCAT 1 cut(s) 1261
MseI TTAA 7 cut(s) 48, 546, 618, 783, 1029, 1308, 1570
MslI CAYNNNNRTG 2 cut(s) 626, 1006
MspA1I CMGCKG 2 cut(s) 749, 995
MspI CCGG 2 cut(s) 761, 1166
MspR9I CCNGG 2 cut(s) 1166, 1386
MvaI CCWGG 1 cut(s) 1386
MvnI CGCG 2 cut(s) 300, 1041
MwoI GCNNNNNNNGC 9 cut(s) 297, 456, 465, 607, 746, 821, 907, 1397, 1511
NarI GGCGCC 1 cut(s) 468
NciI CCSGG 1 cut(s) 1166
NcoI CCATGG 1 cut(s) 72
NdeII GATC 4 cut(s) 381, 477, 888, 1276
NlaIII CATG 6 cut(s) 76, 388, 970, 1018, 1263, 1483
NlaIV GGNNCC 3 cut(s) 268, 469, 1173
NmuCI GTSAC 3 cut(s) 915, 997, 1235
NsiI ATGCAT 1 cut(s) 1261
NspV TTCGAA 1 cut(s) 1323
PceI AGGCCT 1 cut(s) 1395
PcsI WCGNNNNNNNCGW 1 cut(s) 663
PfeI GAWTC 2 cut(s) 237, 1435
PflFI GACNNNGTC 1 cut(s) 356
PkrI GCNGC 6 cut(s) 299, 424, 461, 739, 1171, 1404
PleI GAGTC 3 cut(s) 489, 922, 1491
PluTI GGCGCC 1 cut(s) 471
PmaCI CACGTG 1 cut(s) 1235
PmlI CACGTG 1 cut(s) 1235
PpsI GAGTC 3 cut(s) 489, 922, 1491
Ppu21I YACGTR 1 cut(s) 1235
Psp124BI GAGCTC 1 cut(s) 591
Psp6I CCWGG 1 cut(s) 1384
PspCI CACGTG 1 cut(s) 1235
PspFI CCCAGC 2 cut(s) 641, 745
PspGI CCWGG 1 cut(s) 1384
PspN4I GGNNCC 3 cut(s) 268, 469, 1173
PspPI GGNCC 2 cut(s) 266, 1011
PstI CTGCAG 1 cut(s) 912
PsuI RGATCY 2 cut(s) 477, 1276
PsyI GACNNNGTC 1 cut(s) 356
PvuII CAGCTG 2 cut(s) 749, 995
RsaI GTAC 3 cut(s) 653, 982, 1269
RsaNI GTAC 3 cut(s) 652, 981, 1268
RseI CAYNNNNRTG 2 cut(s) 626, 1006
SacI GAGCTC 1 cut(s) 591
SaqAI TTAA 7 cut(s) 48, 546, 618, 783, 1029, 1308, 1570
SatI GCNGC 6 cut(s) 298, 423, 460, 738, 1170, 1403
Sau3AI GATC 4 cut(s) 381, 477, 888, 1276
Sau96I GGNCC 2 cut(s) 266, 1011
SbfI CCTGCAGG 1 cut(s) 912
SchI GAGTC 3 cut(s) 489, 923, 1491
ScrFI CCNGG 2 cut(s) 1166, 1386
SdaI CCTGCAGG 1 cut(s) 912
SduI GDGCHC 2 cut(s) 591, 1047
SfaNI GCATC 3 cut(s) 706, 1060, 1146
SfcI CTRYAG 1 cut(s) 908
SfoI GGCGCC 1 cut(s) 469
SfuI TTCGAA 1 cut(s) 1323
SmiMI CAYNNNNRTG 2 cut(s) 626, 1006
SmlI CTYRAG 1 cut(s) 590
SmoI CTYRAG 1 cut(s) 590
Sse8387I CCTGCAGG 1 cut(s) 912
Sse9I AATT 4 cut(s) 32, 769, 1283, 1545
SseBI AGGCCT 1 cut(s) 1395
SsiI CCGC 9 cut(s) 298, 422, 460, 489, 732, 824, 977, 1169, 1265
SspDI GGCGCC 1 cut(s) 467
SspMI CTAG 2 cut(s) 1067, 1397
SstI GAGCTC 1 cut(s) 591
StuI AGGCCT 1 cut(s) 1395
StyD4I CCNGG 2 cut(s) 1164, 1384
StyI CCWWGG 1 cut(s) 72
TaaI ACNGT 3 cut(s) 152, 371, 659
TaiI ACGT 5 cut(s) 506, 617, 669, 1230, 1237
TaqI TCGA 6 cut(s) 376, 474, 493, 891, 1323, 1446
TasI AATT 4 cut(s) 32, 769, 1283, 1545
TauI GCSGC 4 cut(s) 300, 425, 462, 1172
TfiI GAWTC 2 cut(s) 237, 1435
Tru1I TTAA 7 cut(s) 48, 546, 618, 783, 1029, 1308, 1570
Tru9I TTAA 7 cut(s) 48, 546, 618, 783, 1029, 1308, 1570
TscAI CASTG 3 cut(s) 449, 940, 1008
TseFI GTSAC 3 cut(s) 915, 997, 1235
TseI GCWGC 2 cut(s) 737, 1402
Tsp45I GTSAC 3 cut(s) 915, 997, 1235
TspDTI ATGAA 5 cut(s) 17, 34, 103, 1116, 1308
TspGWI ACGGA 2 cut(s) 233, 313
TspRI CASTG 3 cut(s) 449, 940, 1008
Tth111I GACNNNGTC 1 cut(s) 356
XagI CCTNNNNNAGG 1 cut(s) 1389
XapI RAATTY 1 cut(s) 32
XspI CTAG 2 cut(s) 1067, 1397
Zsp2I ATGCAT 1 cut(s) 1261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.