Rorug02G0231700

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
23082660 .. 23082860
201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0231700.1

Sequence Viewer

Length: 201 bp
ATGACTGAAGACGACTTCCAAATCGCTGATGGAAAATTGGCACCCAACATTTGTTTTTCTCAGCGGGTTAAAGACAAGTTGGACCTGGAATGGCGTTGCGTAGTCATCGTCAAACTTATGGGTAAGCCAAATACTACTAATGCCTGGAAATTCATGTTTGATGCTCTTACTCGTAAATGGAATCCTAAAGGACCTTGGTAG

Protein Analysis

66

Amino Acids

7.74

Weight (kDa)

9.1

Isoelectric Point (pI)

8.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66540 AT1G66540 AT4G37340 AT4G37360 AT4G37370 AT5G36220 AT5G36220
fragaria_vesca FvH4_1g16862 FvH4_1g16870 FvH4_1g16871 FvH4_1g16920 FvH4_1g16921 FvH4_1g16930 FvH4_1g23681 FvH4_1g23710
malus_domestica MD03G1281500.v1.1 MD08G1089700.v1.1 MD15G1074700.v1.1 MD15G1289800.v1.1 MD15G1290300.v1.1
prunus_persica Prupe.6G226600_v2.0.a1 Prupe.6G226800_v2.0.a1 Prupe.6G226900_v2.0.a1 Prupe.6G227000_v2.0.a1 Prupe.6G227100_v2.0.a1 Prupe.6G227300_v2.0.a1 Prupe.6G227400_v2.0.a1
pyrus_communis pycom15g25350 pycom15g25360 pycom15g25370 pycom15g25400
rosa_chinensis RchiOBHm_Chr2g0106831 RchiOBHm_Chr2g0106851 RchiOBHm_Chr2g0106901 RchiOBHm_Chr2g0106911 RchiOBHm_Chr2g0106971 RchiOBHm_Chr2g0106991 RchiOBHm_Chr2g0119331 RchiOBHm_Chr2g0119351 RchiOBHm_Chr2g0119391 RchiOBHm_Chr2g0119411 RchiOBHm_Chr2g0119481 RchiOBHm_Chr2g0119541 RchiOBHm_Chr5g0076421
rosa_laevigata RLG00000012204 RLG00000017542 RLG00000017543 RLG00000017547 RLG00000017549 RLG00000018145 RLG00000018146 RLG00000018148 RLG00000018462 RLG00000018464 RLG00000018465 RLG00000018468 RLG00000018470 RLG00000018471 RLG00000018539 RLG00000018540 RLG00000018592
rosa_multiflora Rmu_co8030410.1_g000001 Rmu_co8333451.1_g000001 Rmu_co8389363.1_g000001 Rmu_sc0001801.1_g000006 Rmu_sc0001801.1_g000023 Rmu_sc0001801.1_g000036 Rmu_sc0002788.1_g000013 Rmu_sc0002868.1_g000014 Rmu_sc0004344.1_g000013 Rmu_sc0004344.1_g000021 Rmu_sc0004344.1_g000027 Rmu_sc0004656.1_g000001 Rmu_sc0006098.1_g000002 Rmu_sc0006098.1_g000007 Rmu_sc0007106.1_g000005 Rmu_sc0007106.1_g000009 Rmu_sc0010912.1_g000001 Rmu_sc0021576.1_g000001 Rmu_sc0031470.1_g000001
rosa_roxburghii Rroxscaffold_2G00122810 Rroxscaffold_2G00123600 Rroxscaffold_2G00124270 Rroxscaffold_2G00124320 Rroxscaffold_2G00124350 Rroxscaffold_2G00136690 Rroxscaffold_2G00136740 Rroxscaffold_2G00136750 Rroxscaffold_2G00136760
rosa_rugosa Rorug02G0139000 Rorug02G0139100 Rorug02G0139200 Rorug02G0139300 Rorug02G0139700 Rorug02G0139900 Rorug02G0221400 Rorug02G0221900 Rorug02G0222100 Rorug02G0231700 Rorug02G0231800 Rorug02G0238400 Rorug02G0238500 Rorug05G0413800 Rorug06G0369500 Rorug07G0161900 Rorug07G0309500.1
rosa_samantha Rh2AG190700 Rh2AG279600 Rh2BG201600 Rh2BG201900 Rh2BG202200 Rh2BG288600 Rh2BG290400 Rh2BG290600 Rh2BG291000 Rh2BG291100 Rh2BG291200 Rh2BG291300 Rh2CG195400 Rh2DG196900 Rh2DG197400 Rh2DG197700 Rh2DG283900 Rh2DG285600 Rh2DG285700 Rh2DG286000 Rh2DG286100 Rh2DG286200 Rh2DG286300 Rh2DG305000 Rh2DG305100 Rh2DG305200 Rh2DG305400 Rh5DG500100 Rh6AG481700 Rh6BG491200 Rh6DG482200
rosa_wichuraiana Rw2G014970 Rw2G015010 Rw2G015030 Rw2G022240 Rw2G022250 Rw2G022290 Rw2G022300 Rw2G022310 Rw2G022320 Rw5G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 40
AciI CCGC 1 cut(s) 64
AcsI RAATTY 1 cut(s) 149
AcuI CTGAAG 1 cut(s) 27
AjnI CCWGG 2 cut(s) 84, 143
ApoI RAATTY 1 cut(s) 149
AspS9I GGNCC 2 cut(s) 82, 191
AvaII GGWCC 2 cut(s) 82, 191
BanI GGYRCC 1 cut(s) 40
BbsI GAAGAC 1 cut(s) 15
BccI CCATC 1 cut(s) 23
BciT130I CCWGG 2 cut(s) 86, 145
Bme1390I CCNGG 2 cut(s) 86, 145
Bme18I GGWCC 2 cut(s) 82, 191
BmgT120I GGNCC 2 cut(s) 82, 191
BmiI GGNNCC 1 cut(s) 42
BmrFI CCNGG 2 cut(s) 86, 145
BmsI GCATC 1 cut(s) 151
BpiI GAAGAC 1 cut(s) 15
BsaJI CCNNGG 1 cut(s) 194
BseBI CCWGG 2 cut(s) 86, 145
BseDI CCNNGG 1 cut(s) 194
BseMII CTCAG 1 cut(s) 74
BshNI GGYRCC 1 cut(s) 40
BspACI CCGC 1 cut(s) 64
BspCNI CTCAG 1 cut(s) 73
BspLI GGNNCC 1 cut(s) 42
BspT107I GGYRCC 1 cut(s) 40
BssECI CCNNGG 1 cut(s) 194
BssT1I CCWWGG 1 cut(s) 194
Bst2UI CCWGG 2 cut(s) 86, 145
BstDEI CTNAG 1 cut(s) 60
BstNI CCWGG 2 cut(s) 86, 145
BstSCI CCNGG 2 cut(s) 84, 143
BstV2I GAAGAC 1 cut(s) 15
Cfr13I GGNCC 2 cut(s) 82, 191
CviAII CATG 1 cut(s) 154
CviJI RGCY 1 cut(s) 127
CviKI_1 RGCY 1 cut(s) 127
DdeI CTNAG 1 cut(s) 60
Eco130I CCWWGG 1 cut(s) 194
Eco47I GGWCC 2 cut(s) 82, 191
Eco57I CTGAAG 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 191
EcoRII CCWGG 2 cut(s) 84, 143
EcoT14I CCWWGG 1 cut(s) 194
ErhI CCWWGG 1 cut(s) 194
FaeI CATG 1 cut(s) 157
FaiI YATR 2 cut(s) 119, 155
FatI CATG 1 cut(s) 153
FauI CCCGC 1 cut(s) 57
Hin1II CATG 1 cut(s) 157
HinfI GANTC 1 cut(s) 181
HpyF3I CTNAG 1 cut(s) 60
Hsp92II CATG 1 cut(s) 157
LpnPI CCDG 4 cut(s) 71, 98, 130, 157
LweI GCATC 1 cut(s) 151
MboII GAAGA 1 cut(s) 20
MluCI AATT 2 cut(s) 35, 149
MmeI TCCRAC 1 cut(s) 60
MseI TTAA 1 cut(s) 69
MspA1I CMGCKG 1 cut(s) 64
MspR9I CCNGG 2 cut(s) 86, 145
MvaI CCWGG 2 cut(s) 86, 145
NlaIII CATG 1 cut(s) 157
NlaIV GGNNCC 1 cut(s) 42
PfeI GAWTC 1 cut(s) 181
PpuMI RGGWCCY 1 cut(s) 191
Psp5II RGGWCCY 1 cut(s) 191
Psp6I CCWGG 2 cut(s) 84, 143
PspGI CCWGG 2 cut(s) 84, 143
PspN4I GGNNCC 1 cut(s) 42
PspPI GGNCC 2 cut(s) 82, 191
PspPPI RGGWCCY 1 cut(s) 191
SaqAI TTAA 1 cut(s) 69
Sau96I GGNCC 2 cut(s) 82, 191
ScrFI CCNGG 2 cut(s) 86, 145
SetI ASST 2 cut(s) 87, 196
SfaNI GCATC 1 cut(s) 151
SgeI CNNG 8 cut(s) 77, 88, 97, 98, 156, 157, 166, 183
SinI GGWCC 2 cut(s) 82, 191
Sse9I AATT 2 cut(s) 35, 149
SsiI CCGC 1 cut(s) 64
StyD4I CCNGG 2 cut(s) 84, 143
StyI CCWWGG 1 cut(s) 194
TasI AATT 2 cut(s) 35, 149
TfiI GAWTC 1 cut(s) 181
Tru1I TTAA 1 cut(s) 69
Tru9I TTAA 1 cut(s) 69
TspDTI ATGAA 1 cut(s) 142
VpaK11BI GGWCC 2 cut(s) 82, 191
XapI RAATTY 1 cut(s) 149
XcmI CCANNNNNNNNNTGG 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.