Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0010977

Physical Location & Seq

Genomic Coordinates Reverse (-)

76561005 .. 76573706

Gene Structure 12702 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G043650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGGTATTAAAATTGATAAAGGTGTTTTGTGGAAATGGAGGAGAAAAGCTGCTACTCTTAGCTGAAGGCTTAGTGAAGAAGCATGTTGCCTCTCATAGCTTGCATGAGCCTGAAGCTCTCATGGTCTATATTTCCATATTGGAACAACAAGCAAAGTATGGGGATGCTTTGGAGATTCTCTCTGGTAAATTAGGATCGCTTTTACTGGTTGAAGTTGATAAGCTACGCATACAGGGGAGGCTGCTTGCTCGGGTGGGTGACTACGCTGCTGCCGCCATAATATTTCAAAAAATTCTCGAACTATGTCCTGATGATTGGGAATGTTTCCTACATTATCTAGGCTGTTTGCTGGAGGATGACAGCAATTGGTGCAATAGGGCCATAACAGATCCAATTCATCCTCCGAAATTTGTCGAGTGCAAGATTTCAAACTTGACAGATGAAGTGTTTGATTCTCGTATGTCAAATGCATCGGAATTTGTACAAAAGTTACAAGGAAATACTGGCAATAATTTTGCAAGGTGTCCATACTTGGCAAATATTGAAATTGAAAGGAGAAGGTGCTTACATGGCAAGGGGGATGATGGCAAGTTAATGGAGGCTCTAATCCAGTACTTTTTTGGGTTTGGTCACTTGGCCTGCTTCACTTCTGATGTTGAGATGTTTCTTGAAGTCTTAACTCCTGATAAGAAGGCAGAACTTTTGGGGAAGTTAAGGGAAAGTTCTGCCTCCATTTCAGCTGTGCCAGCAAAAGTACTTGGGCAGTCAATAACACTCTTTAAAATTCAAGAACTGATCGGAAACATGTCCAAGCTTACTGTTGTTGAACTTGAGGGCTCTGTTGTGCAGATGGTGGAGATGTACTGTAAAAACCTACCACTTTCAAAGGACTTGGATTCTCAAGAGAGTATGCATGGGGAAGAGCTGCTATCACTAGCTTGCAATGTATTGATTCAGTTATACTGGCGCACCAGGAATGTTGGCTACTTTGTTGAGGCAATCATGTTGTTGGAGTTTGGCTTGACTATACGAAGACATGTATGGCAGTACAAGATCTTGTTGCTGCATTTGTATTCCCACCTGGGTGCCCTTTCTCTAGCATATGAATGGTTCAAATCACTCGATGTTAAAAATATCTTGATGGAAACTGTGTCTCACCACATTTTACCCCAGATGCTGGTGTCTCCCCTCTGGGTAGATATAAATAATCTGCTAAAGGATTATCTCAAGTTTATGGATGACCATTTGAGAGAATCAGCGGATCTTACGTTTCTTGCCTATCGCCATAGAAATTACTCAAAAGTAATTGAATTTGTCCAGTTTAAAGAGCGACTACAACATTCTAATCAGTATCTAGTGGCGAGGGTTGAAGGACCCATTCTTCAGTTAAAGCAGAATGCAGTTAACATTGAAGAGGAGGAGGCGGTTCTTGAAAGCTTGAAATGTGGTATTCACTTTGTTGAACTCTCTAATGAGATTGGATCCAAGTCTCTGACCTTCAATGAAGATTTGCAGTCACGTCCCTGGTGGGCACCAACTTCAGAGAGAAACTATCTTTTAGGTCCTTATGAAGGAGTATCATACTATCCCAGAGAGAACTCGATGACAGAAAGGGAGGCAAATGTACGGAGCATAATTGAGAGGAAATCTCTTCTTCCTCGGATGATTTATCTGTCCATACAGAGCGCTTCAACTTCACTCAAGGAAAATCTGGAAGTCAATGGGTCAGTGTCTGACCCTAAAATCCCCTCAGAGCTGAAGATTTTGCTTGAGCGATATGCAAAGATGTTGGGATATTCATTCACTGATGCCATAGAAGTGGTCTTGGGAGTTTCTGGTGGCCAAAAGTCTTTTGAGGTCTTTGGTTCGGACTTGATTGACTGGATAAACTTTTCTGTGTTTCTGAATGCATGGAACTTGAGTTCCCATGAGATTGGGCTGGCAAATGGCCGTTGTGCAGATTCTATATTGGAGAAGTATGTTTCAGATAAAGTTAGCTCCATGGAGACTCTAATTACCTCTCCTTGGGTTGATCTTCCAATTCTGGTACAGTTAGTTACAGAATCGTTGGCCTGGCATGGTCTTGTAATTCAATCTTGCGTTCGTTCATGTTTCCCATCGGGAAAGAAGAAGAAGAAAACTGGATTTGCAGATCAGTCCTGTTTGTCTCGTATCCGTGATTCAGTCTTGTCTTTATGCAATACTCTAGAAAAGGTTAGGAAATGGTTAAAAGAACAGATCAACAGGCCAGAGGATGAAAATATGGAGACTCTACTTTCCTCTTTGCGGAAGAAAGAACAGCTCGAGGGACCTGGACAGGTTTTCCAGATTATAGAAACTTTTACCTCATCAATACATGACACAGAGCTTGGTGAGAGAATTTCCCAATCATTGAAGTCTTGGAGTCATGTTGATGTTGCAAGGAAGATAGTTGCTGGGAAGTGTACAGTACTGTCCGAGTTTCTCCGAATTTGTGATTCGAAATCAAAGTTGTTTCAAGCACTGAAACAGCAGATAGCTCAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005829 GO:0005911 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006911 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0010324 GO:0010467 GO:0016043 GO:0016192 GO:0017196 GO:0018193 GO:0018206 GO:0019538 GO:0030054 GO:0031248 GO:0031365 GO:0031414 GO:0031416 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051604 GO:0055044 GO:0061024 GO:0071704 GO:0071840 GO:0098657 GO:0099024 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NatB_MDM20

Protein Analysis

842

Amino Acids

95.52

Weight (kDa)

5.97

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NatB_MDM20	PF09797	148 - 466	1.9e-57	N-acetyltransferase B complex (NatB) non catalytic subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58450 AT5G58450
fragaria_vesca	FvH4_3g39760
malus_domestica	MD03G1056500.v1.1 MD11G1058300.v1.1
prunus_persica	Prupe.6G048400_v2.0.a1
pyrus_communis	pycom03g04480 pycom11g04830
rosa_chinensis	RchiOBHm_Chr5g0071641
rosa_laevigata	RLG00000036235
rosa_multiflora	Rmu_sc0005745.1_g000032
rosa_roxburghii	Rroxscaffold_1G00009550
rosa_rugosa	Rorug05G0413800 Rorug05G0413800 Rorug05G0413800
rosa_samantha	Rh5AG469800 Rh5BG489100 Rh5CG513100 Rh5DG499700
rosa_wichuraiana	Rw5G043650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1085, 1531
AccB7I	CCANNNNNTGG	1 cut(s)	1177
AciI	CCGC	4 cut(s)	273, 1259, 1424, 2287
AclWI	GGATC	5 cut(s)	202, 383, 1269, 1476, 1489
AcoI	YGGCCR	2 cut(s)	1840, 1948
AcsI	RAATTY	7 cut(s)	291, 407, 476, 783, 1310, 2379, 2469
AcuI	CTGAAG	5 cut(s)	84, 132, 1367, 1524, 1778
AfaI	GTAC	9 cut(s)	483, 614, 756, 863, 1049, 1626, 2049, 2446, 2451
AfeI	AGCGCT	1 cut(s)	1687
AfiI	CCNNNNNNNGG	4 cut(s)	1177, 1571, 2025, 2286
AflIII	ACRYGT	2 cut(s)	804, 1036
AjiI	CACGTC	1 cut(s)	1520
AjnI	CCWGG	5 cut(s)	971, 1080, 1523, 2072, 2311
AleI	CACNNNNGTG	1 cut(s)	1083
AloI	GAACNNNNNNTCC	4 cut(s)	1906, 1907, 1938, 1939
Alw26I	GTCTC	6 cut(s)	1158, 1188, 1494, 2000, 2172, 2261
AlwI	GGATC	5 cut(s)	202, 383, 1269, 1476, 1489
AlwNI	CAGNNNCTG	2 cut(s)	1177, 1733
Ama87I	CYCGRG	2 cut(s)	249, 2303
Aor51HI	AGCGCT	1 cut(s)	1687
AoxI	GGCC	6 cut(s)	378, 636, 1840, 1948, 2070, 2246
ApeKI	GCWGC	6 cut(s)	49, 241, 266, 269, 925, 1063
ApoI	RAATTY	7 cut(s)	291, 407, 476, 783, 1310, 2379, 2469
AspLEI	GCGC	2 cut(s)	969, 1688
AspS9I	GGNCC	4 cut(s)	378, 1373, 1562, 2309
AsuHPI	GGTGA	3 cut(s)	269, 1148, 2384
AsuII	TTCGAA	1 cut(s)	2480
AvaI	CYCGRG	2 cut(s)	249, 2303
AvaII	GGWCC	3 cut(s)	1373, 1562, 2309
BaeGI	GKGCMC	2 cut(s)	1090, 1534
BalI	TGGCCA	1 cut(s)	1842
BamHI	GGATCC	1 cut(s)	1481
BanI	GGYRCC	2 cut(s)	1085, 1531
BanII	GRGCYC	1 cut(s)	839
BbsI	GAAGAC	1 cut(s)	1039
BbvI	GCAGC	6 cut(s)	36, 228, 253, 256, 912, 1050
BccI	CCATC	4 cut(s)	578, 844, 1135, 2125
BceAI	ACGGC	1 cut(s)	1935
BciT130I	CCWGG	5 cut(s)	973, 1082, 1525, 2074, 2313
BciVI	GTATCC	1 cut(s)	2183
BcoDI	GTCTC	6 cut(s)	1158, 1188, 1494, 2000, 2172, 2261
BfaI	CTAG	5 cut(s)	338, 935, 1097, 1355, 2207
BfoI	RGCGCY	1 cut(s)	1689
BfuI	GTATCC	1 cut(s)	2183
BglII	AGATCT	1 cut(s)	1053
BisI	GCNGC	7 cut(s)	50, 242, 267, 270, 273, 926, 1064
BlsI	GCNGC	7 cut(s)	51, 243, 268, 271, 274, 927, 1065
BmcAI	AGTACT	3 cut(s)	614, 756, 2451
Bme1390I	CCNGG	5 cut(s)	973, 1082, 1525, 2074, 2313
Bme18I	GGWCC	3 cut(s)	1373, 1562, 2309
BmeT110I	CYCGRG	2 cut(s)	249, 2303
BmgBI	CACGTC	1 cut(s)	1520
BmgT120I	GGNCC	4 cut(s)	378, 1373, 1562, 2309
BmiI	GGNNCC	5 cut(s)	1087, 1375, 1483, 1533, 2310
BmrFI	CCNGG	5 cut(s)	973, 1082, 1525, 2074, 2313
BmsI	GCATC	4 cut(s)	154, 479, 1164, 1798
BpiI	GAAGAC	1 cut(s)	1039
BplI	GAGNNNNNCTC	4 cut(s)	164, 196, 1633, 1665
BpmI	CTGGAG	1 cut(s)	371
Bpu14I	TTCGAA	1 cut(s)	2480
BpuEI	CTTGAG	7 cut(s)	851, 885, 1211, 1685, 1790, 1939, 2505
BsaJI	CCNNGG	5 cut(s)	1081, 1523, 1658, 2001, 2024
Bsc4I	CCNNNNNNNGG	4 cut(s)	1177, 1571, 2025, 2286
Bse1I	ACTGG	7 cut(s)	210, 508, 610, 968, 1318, 1886, 2146
Bse3DI	GCAATG	1 cut(s)	949
BseBI	CCWGG	5 cut(s)	973, 1082, 1525, 2074, 2313
BseDI	CCNNGG	5 cut(s)	1081, 1523, 1658, 2001, 2024
BseGI	GGATG	7 cut(s)	169, 361, 397, 586, 1243, 1668, 2260
BseLI	CCNNNNNNNGG	4 cut(s)	1177, 1571, 2025, 2286
BseMI	GCAATG	1 cut(s)	949
BseMII	CTCAG	1 cut(s)	1764
BseNI	ACTGG	7 cut(s)	210, 508, 610, 968, 1318, 1886, 2146
BseRI	GAGGAG	3 cut(s)	54, 1430, 1433
BseSI	GKGCMC	2 cut(s)	1090, 1534
BseXI	GCAGC	6 cut(s)	36, 228, 253, 256, 912, 1050
BseYI	CCCAGC	1 cut(s)	2435
BsgI	GTGCAG	2 cut(s)	866, 1977
BshFI	GGCC	6 cut(s)	380, 638, 1842, 1950, 2072, 2248
BshNI	GGYRCC	2 cut(s)	1085, 1531
BsiHKCI	CYCGRG	2 cut(s)	249, 2303
BslFI	GGGAC	2 cut(s)	1506, 2322
BslI	CCNNNNNNNGG	4 cut(s)	1177, 1571, 2025, 2286
BsmAI	GTCTC	6 cut(s)	1158, 1188, 1494, 2000, 2172, 2261
BsmFI	GGGAC	2 cut(s)	1506, 2322
BsmI	GAATGC	2 cut(s)	1402, 1912
BsnI	GGCC	6 cut(s)	380, 638, 1842, 1950, 2072, 2248
BsoBI	CYCGRG	2 cut(s)	249, 2303
Bsp119I	TTCGAA	1 cut(s)	2480
Bsp1286I	GDGCHC	3 cut(s)	839, 1090, 1534
Bsp1407I	TGTACA	2 cut(s)	481, 2444
Bsp143I	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
Bsp19I	CCATGG	1 cut(s)	2001
BspACI	CCGC	4 cut(s)	273, 1259, 1424, 2287
BspANI	GGCC	6 cut(s)	380, 638, 1842, 1950, 2072, 2248
BspCNI	CTCAG	1 cut(s)	1763
BspLI	GGNNCC	5 cut(s)	1087, 1375, 1483, 1533, 2310
BspPI	GGATC	5 cut(s)	202, 383, 1269, 1476, 1489
BspQI	GCTCTTC	1 cut(s)	915
BspT104I	TTCGAA	1 cut(s)	2480
BspT107I	GGYRCC	2 cut(s)	1085, 1531
BsrDI	GCAATG	1 cut(s)	949
BsrGI	TGTACA	2 cut(s)	481, 2444
BsrI	ACTGG	7 cut(s)	210, 508, 610, 968, 1318, 1886, 2146
BssECI	CCNNGG	5 cut(s)	1081, 1523, 1658, 2001, 2024
BssMI	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
BssT1I	CCWWGG	2 cut(s)	2001, 2024
Bst2UI	CCWGG	5 cut(s)	973, 1082, 1525, 2074, 2313
Bst4CI	ACNGT	6 cut(s)	820, 866, 1150, 2052, 2449, 2454
Bst6I	CTCTTC	3 cut(s)	915, 1407, 1656
BstAPI	GCANNNNNTGC	1 cut(s)	369
BstAUI	TGTACA	2 cut(s)	481, 2444
BstBI	TTCGAA	1 cut(s)	2480
BstC8I	GCNNGC	6 cut(s)	101, 246, 640, 747, 940, 1941
BstDEI	CTNAG	3 cut(s)	58, 70, 1750
BstDSI	CCRYGG	1 cut(s)	2001
BstENI	CCTNNNNNAGG	1 cut(s)	1569
BstF5I	GGATG	7 cut(s)	169, 361, 397, 586, 1243, 1668, 2260
BstH2I	RGCGCY	1 cut(s)	1689
BstHHI	GCGC	2 cut(s)	969, 1688
BstKTI	GATC	9 cut(s)	197, 391, 798, 1056, 1264, 1484, 2035, 2155, 2241
BstMAI	GTCTC	6 cut(s)	1158, 1188, 1494, 2000, 2172, 2261
BstMBI	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
BstMWI	GCNNNNNNNGC	4 cut(s)	272, 369, 570, 746
BstNI	CCWGG	5 cut(s)	973, 1082, 1525, 2074, 2313
BstNSI	RCATGY	3 cut(s)	86, 808, 1040
BstSCI	CCNGG	5 cut(s)	971, 1080, 1523, 2072, 2311
BstSLI	GKGCMC	2 cut(s)	1090, 1534
BstV1I	GCAGC	6 cut(s)	36, 228, 253, 256, 912, 1050
BstV2I	GAAGAC	1 cut(s)	1039
BstX2I	RGATCY	4 cut(s)	388, 1053, 1261, 1481
BstXI	CCANNNNNNTGG	2 cut(s)	1819, 1934
BstYI	RGATCY	4 cut(s)	388, 1053, 1261, 1481
BsuI	GTATCC	1 cut(s)	2183
BsuRI	GGCC	6 cut(s)	380, 638, 1842, 1950, 2072, 2248
BtgI	CCRYGG	1 cut(s)	2001
BtrI	CACGTC	1 cut(s)	1520
BtsCI	GGATG	7 cut(s)	169, 361, 397, 586, 1243, 1668, 2260
BtsIMutI	CAGTG	3 cut(s)	1734, 1803, 2501
Cac8I	GCNNGC	6 cut(s)	101, 246, 640, 747, 940, 1941
CaiI	CAGNNNCTG	2 cut(s)	1177, 1733
CfoI	GCGC	2 cut(s)	969, 1688
Cfr13I	GGNCC	4 cut(s)	378, 1373, 1562, 2309
Csp6I	GTAC	9 cut(s)	482, 613, 755, 862, 1048, 1625, 2048, 2445, 2450
CviQI	GTAC	9 cut(s)	482, 613, 755, 862, 1048, 1625, 2048, 2445, 2450
DdeI	CTNAG	3 cut(s)	58, 70, 1750
DpnI	GATC	9 cut(s)	196, 390, 797, 1055, 1263, 1483, 2034, 2154, 2240
DpnII	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
DraI	TTTAAA	2 cut(s)	781, 1324
EaeI	YGGCCR	2 cut(s)	1840, 1948
Eam1104I	CTCTTC	3 cut(s)	915, 1407, 1656
EarI	CTCTTC	3 cut(s)	915, 1407, 1656
Eco130I	CCWWGG	2 cut(s)	2001, 2024
Eco24I	GRGCYC	1 cut(s)	839
Eco47I	GGWCC	3 cut(s)	1373, 1562, 2309
Eco47III	AGCGCT	1 cut(s)	1687
Eco57I	CTGAAG	5 cut(s)	84, 132, 1367, 1524, 1778
Eco88I	CYCGRG	2 cut(s)	249, 2303
EcoNI	CCTNNNNNAGG	1 cut(s)	1569
EcoO109I	RGGNCCY	3 cut(s)	1373, 1562, 2309
EcoRII	CCWGG	5 cut(s)	971, 1080, 1523, 2072, 2311
EcoT14I	CCWWGG	2 cut(s)	2001, 2024
EcoT22I	ATGCAT	3 cut(s)	472, 915, 1912
EcoT38I	GRGCYC	1 cut(s)	839
ErhI	CCWWGG	2 cut(s)	2001, 2024
FaqI	GGGAC	2 cut(s)	1506, 2322
FauNDI	CATATG	1 cut(s)	1102
Fnu4HI	GCNGC	7 cut(s)	50, 242, 267, 270, 273, 926, 1064
FokI	GGATG	7 cut(s)	176, 368, 384, 593, 1250, 1675, 2267
FriOI	GRGCYC	1 cut(s)	839
Fsp4HI	GCNGC	7 cut(s)	50, 242, 267, 270, 273, 926, 1064
FspBI	CTAG	5 cut(s)	338, 935, 1097, 1355, 2207
GlaI	GCGC	2 cut(s)	968, 1687
GluI	GCNGC	7 cut(s)	50, 242, 267, 270, 273, 926, 1064
GsaI	CCCAGC	1 cut(s)	2439
GsuI	CTGGAG	1 cut(s)	371
HaeII	RGCGCY	1 cut(s)	1689
HaeIII	GGCC	6 cut(s)	380, 638, 1842, 1950, 2072, 2248
HhaI	GCGC	2 cut(s)	969, 1688
Hin6I	GCGC	2 cut(s)	967, 1686
HinP1I	GCGC	2 cut(s)	967, 1686
HincII	GTYRAC	1 cut(s)	1405
HindII	GTYRAC	1 cut(s)	1405
HindIII	AAGCTT	2 cut(s)	812, 1435
HpaI	GTTAAC	1 cut(s)	1405
HphI	GGTGA	3 cut(s)	269, 1148, 2384
Hpy166II	GTNNAC	2 cut(s)	1405, 2445
Hpy8I	GTNNAC	2 cut(s)	1405, 2445
HpyAV	CCTTC	6 cut(s)	59, 552, 685, 1364, 1507, 1565
HpyCH4III	ACNGT	6 cut(s)	820, 866, 1150, 2052, 2449, 2454
HpyCH4IV	ACGT	2 cut(s)	1268, 1519
HpyF10VI	GCNNNNNNNGC	4 cut(s)	272, 369, 570, 746
HpyF3I	CTNAG	3 cut(s)	58, 70, 1750
HpySE526I	ACGT	2 cut(s)	1268, 1519
HspAI	GCGC	2 cut(s)	967, 1686
KspAI	GTTAAC	1 cut(s)	1405
Kzo9I	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
LguI	GCTCTTC	1 cut(s)	915
LmnI	GCTCC	2 cut(s)	1629, 2003
Lsp1109I	GCAGC	6 cut(s)	36, 228, 253, 256, 912, 1050
LweI	GCATC	4 cut(s)	154, 479, 1164, 1798
MaeI	CTAG	5 cut(s)	338, 935, 1097, 1355, 2207
MaeII	ACGT	2 cut(s)	1268, 1519
MaeIII	GTNAC	5 cut(s)	257, 489, 629, 1515, 2056
MalI	GATC	9 cut(s)	196, 390, 797, 1055, 1263, 1483, 2034, 2154, 2240
MboI	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
MfeI	CAATTG	1 cut(s)	364
MflI	RGATCY	4 cut(s)	388, 1053, 1261, 1481
MhlI	GDGCHC	3 cut(s)	839, 1090, 1534
MlsI	TGGCCA	1 cut(s)	1842
MluNI	TGGCCA	1 cut(s)	1842
MlyI	GAGTC	3 cut(s)	2002, 2263, 2413
MmeI	TCCRAC	1 cut(s)	990
Mox20I	TGGCCA	1 cut(s)	1842
Mph1103I	ATGCAT	3 cut(s)	472, 915, 1912
MscI	TGGCCA	1 cut(s)	1842
MslI	CAYNNNNRTG	4 cut(s)	1083, 1105, 1817, 2412
Msp20I	TGGCCA	1 cut(s)	1842
MspA1I	CMGCKG	2 cut(s)	740, 1259
MspR9I	CCNGG	5 cut(s)	973, 1082, 1525, 2074, 2313
MunI	CAATTG	1 cut(s)	364
Mva1269I	GAATGC	2 cut(s)	1402, 1912
MvaI	CCWGG	5 cut(s)	973, 1082, 1525, 2074, 2313
MwoI	GCNNNNNNNGC	4 cut(s)	272, 369, 570, 746
NcoI	CCATGG	1 cut(s)	2001
NdeI	CATATG	1 cut(s)	1102
NdeII	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
NlaIV	GGNNCC	5 cut(s)	1087, 1375, 1483, 1533, 2310
NmuCI	GTSAC	3 cut(s)	257, 629, 1515
NsiI	ATGCAT	3 cut(s)	472, 915, 1912
NspI	RCATGY	3 cut(s)	86, 808, 1040
NspV	TTCGAA	1 cut(s)	2480
OliI	CACNNNNGTG	1 cut(s)	1083
PaeR7I	CTCGAG	1 cut(s)	2303
PciI	ACATGT	2 cut(s)	804, 1036
PciSI	GCTCTTC	1 cut(s)	915
PctI	GAATGC	2 cut(s)	1402, 1912
PfeI	GAWTC	9 cut(s)	175, 452, 896, 952, 1253, 1961, 2063, 2180, 2477
PflMI	CCANNNNNTGG	1 cut(s)	1177
PkrI	GCNGC	7 cut(s)	51, 243, 268, 271, 274, 927, 1065
PleI	GAGTC	3 cut(s)	2002, 2263, 2412
PpsI	GAGTC	3 cut(s)	2002, 2263, 2412
PpuMI	RGGWCCY	3 cut(s)	1373, 1562, 2309
PscI	ACATGT	2 cut(s)	804, 1036
Psp5II	RGGWCCY	3 cut(s)	1373, 1562, 2309
Psp6I	CCWGG	5 cut(s)	971, 1080, 1523, 2072, 2311
PspFI	CCCAGC	1 cut(s)	2435
PspGI	CCWGG	5 cut(s)	971, 1080, 1523, 2072, 2311
PspN4I	GGNNCC	5 cut(s)	1087, 1375, 1483, 1533, 2310
PspPI	GGNCC	4 cut(s)	378, 1373, 1562, 2309
PspPPI	RGGWCCY	3 cut(s)	1373, 1562, 2309
PspXI	VCTCGAGB	1 cut(s)	2303
PstNI	CAGNNNCTG	2 cut(s)	1177, 1733
PsuI	RGATCY	4 cut(s)	388, 1053, 1261, 1481
PvuII	CAGCTG	1 cut(s)	740
RsaI	GTAC	9 cut(s)	483, 614, 756, 863, 1049, 1626, 2049, 2446, 2451
RsaNI	GTAC	9 cut(s)	482, 613, 755, 862, 1048, 1625, 2048, 2445, 2450
RseI	CAYNNNNRTG	4 cut(s)	1083, 1105, 1817, 2412
SapI	GCTCTTC	1 cut(s)	915
SatI	GCNGC	7 cut(s)	50, 242, 267, 270, 273, 926, 1064
Sau3AI	GATC	9 cut(s)	194, 388, 795, 1053, 1261, 1481, 2032, 2152, 2238
Sau96I	GGNCC	4 cut(s)	378, 1373, 1562, 2309
ScaI	AGTACT	3 cut(s)	614, 756, 2451
SchI	GAGTC	3 cut(s)	2002, 2263, 2413
ScrFI	CCNGG	5 cut(s)	973, 1082, 1525, 2074, 2313
SduI	GDGCHC	3 cut(s)	839, 1090, 1534
SfaNI	GCATC	4 cut(s)	154, 479, 1164, 1798
Sfr274I	CTCGAG	1 cut(s)	2303
SfuI	TTCGAA	1 cut(s)	2480
SinI	GGWCC	3 cut(s)	1373, 1562, 2309
SlaI	CTCGAG	1 cut(s)	2303
SmiMI	CAYNNNNRTG	4 cut(s)	1083, 1105, 1817, 2412
SmlI	CTYRAG	8 cut(s)	830, 900, 1226, 1700, 1769, 1918, 2303, 2520
SmoI	CTYRAG	8 cut(s)	830, 900, 1226, 1700, 1769, 1918, 2303, 2520
SsiI	CCGC	4 cut(s)	273, 1259, 1424, 2287
SspI	AATATT	2 cut(s)	282, 541
SspMI	CTAG	5 cut(s)	338, 935, 1097, 1355, 2207
StyD4I	CCNGG	5 cut(s)	971, 1080, 1523, 2072, 2311
StyI	CCWWGG	2 cut(s)	2001, 2024
TaaI	ACNGT	6 cut(s)	820, 866, 1150, 2052, 2449, 2454
TaiI	ACGT	2 cut(s)	1271, 1522
TaqI	TCGA	6 cut(s)	297, 414, 1122, 1601, 2304, 2480
TatI	WGTACW	7 cut(s)	481, 612, 754, 861, 1047, 2444, 2449
TauI	GCSGC	1 cut(s)	275
TfiI	GAWTC	9 cut(s)	175, 452, 896, 952, 1253, 1961, 2063, 2180, 2477
TscAI	CASTG	3 cut(s)	1734, 1810, 2508
TseFI	GTSAC	3 cut(s)	257, 629, 1515
TseI	GCWGC	6 cut(s)	49, 241, 266, 269, 925, 1063
Tsp45I	GTSAC	3 cut(s)	257, 629, 1515
TspDTI	ATGAA	8 cut(s)	386, 456, 1119, 1518, 1584, 1788, 2097, 2271
TspGWI	ACGGA	2 cut(s)	1642, 2165
TspRI	CASTG	3 cut(s)	1734, 1810, 2508
Van91I	CCANNNNNTGG	1 cut(s)	1177
VpaK11BI	GGWCC	3 cut(s)	1373, 1562, 2309
XagI	CCTNNNNNAGG	1 cut(s)	1569
XapI	RAATTY	7 cut(s)	291, 407, 476, 783, 1310, 2379, 2469
XbaI	TCTAGA	1 cut(s)	2206
XceI	RCATGY	3 cut(s)	86, 808, 1040
XcmI	CCANNNNNNNNNTGG	1 cut(s)	617
XhoI	CTCGAG	1 cut(s)	2303
XspI	CTAG	5 cut(s)	338, 935, 1097, 1355, 2207
ZrmI	AGTACT	3 cut(s)	614, 756, 2451
Zsp2I	ATGCAT	3 cut(s)	472, 915, 1912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.