Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0008410

Physical Location & Seq

Genomic Coordinates Forward (+)

4877361 .. 4881595

Gene Structure 4235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCGCCTACTGCGAAATCGAACGGGAAAACCATCACAGACTCCGCCATTTCGTCCAAGATTCCGGCAACCGCAAACCCTTTAGCCGAAGAGCCGTCGCAGATTGCTTCCAACATCAATTACCACGCCAAATTCAGCCCCCACTTCTCGCCGTTCAAGTTCGAGCCGGAGCAAGCCTACTACGCCACCGCCGACAGCGTCCGCGATCGCCTGATCCAACAATGGAACGAGACGTACCTGCATTTCCACAAGGAGAATCCCAAGCAGACTTACTACTTGTCCATGGAGTATCTTCAAGGACGAGCCTTGACCAATGCGATTGGGAATTTGAATGTTCAGAGTGCTTATGCTGAGGCTTTGAACAAGTTGGGGCATCAGCTGGAGGAAATAACAGAGCAGGAGAAAGATGCAGCCCTCGGAAATGGTGGGCTGGGAAGGCTTGCTTCGTGCTTTCTAGACTCCATGGCAACATTGAATTTGCCTGCATGGGGGTATGGTTTGAGGTACAGGTACGGGCTGTTCAAGCAGCGGATTGCCAAGGATGGCCAGGAAGAAACTGCTGAGGATTGGCTAGAGAAATTTAGTCCTTGGGAAGTTGTCAGGCATGATGTTGTGTACCCTGTCAGATTTTTTGGTCGTGTTCACGTCAATCCTGATGGATCCCGAAAGTGGGTTGAGGGAGAGGTTTTGCAAGCTCTGGCTTATGATGTGCCAATTCCAGGATACAAAACCAAGAACACTATTAGTCTCCGTCTATGGGAAGCCAAAGCATCTGCTGAGGATTTTAACCTATTTCAGTTTAATGATGGACAGTATGAATCTGCTGCGCAGCTTCATTCTCGAGCTCAACAGATTTGTGCTGTTCTATATCCTGGAGATGCCACAGAGGAGGGGAAACTTTTAAGGCTGAAGCAACAATTCTTCCTCTGCAGTGCATCACTTCAGGACATTATTTTTAGATTCAAGGAGAGGAAACAGGGGACAGACACATTGCAATGGTCAGAGTTCCCAAAAAAGGTTGCTGTCCAAATGAACGATACTCATCCTACGCTGGCAATTCCGGAGCTGATGCGACTGCTATTGGATGAGGAAGGTCTTGGGTGGGATGAGGCATGGGAAGTGACAACAAGGACGGTTGCTTATACTAATCACACAGTCCTTCCTGAAGCACTTGAGAAATGGTCACAAGCCGTAATGTGGAAGCTTCTCCCTCGCCATATGCAAATAATAGAAGAAATTGACAAAAGATTCATTGCTATGGTACATGCTACACGAAGTGATCTTGAGAGCAAAATTCCCAGCTTGTGCGTCTTGGATAACAATCCCCAAAAGCCTGTAGTGCGAATGGCAAATTTATGTGTGGTGTCTGCACATACGGTTAATGGTGTTGCCCAATTGCACAGTGATATTTTAAAAAATGAGTTATTTGTAGATTATGTCTCCATATGGCCAACAAAGTTCCAAAACAAAACCAATGGGATTACTCCTCGCCGGTGGCTTCGGTTTTGCAGTCCTGAGCTCAGTAATATAATCACCAAATGGTTAAAAACGGATGAATGGGTTACCAACCTGGACCTACTTGTAGGTCTTCGAAAGTTTGCTGATGATTCAAAATTACAAGAAGAATGGGCGTCTGCCAAGATGGCCAATAAGAAGCGTTTGGCACAGTACATAGAGCATGTGGCAGGTGTCAAGATTGATCCAAACACTCTATTTGACATACAAGTGAAGCGTATCCATGAATATAAGAGACAGTTGCTGAATATTCTGGGTGCAGTTTATCGGTACAAGAAGTTAAAGGAGATGAGCCCTGAAGATCGAAAGAAGACAACTCCACGCACTATCATGATTGGAGGAAAGGCATTTGCAACATATACAAATGCAAAAAGAATAGTCAAGCTGGTAGACGATGTCGGTGCTGTGGTCAACAATCGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

647

Amino Acids

73.88

Weight (kDa)

8.56

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	120 - 644	2e-216	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46970
fragaria_vesca	FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910
malus_domestica	MD03G1077800.v1.1 MD05G1167500.v1.1 MD11G1082200.v1.1
prunus_persica	Prupe.6G062600_v2.0.a1
pyrus_communis	pycom03g06170 pycom11g07050
rosa_chinensis	RchiOBHm_Chr5g0068321
rosa_laevigata	RLG00000035965
rosa_multiflora	Rmu_sc0001418.1_g000022
rosa_roxburghii	Rroxscaffold_1G00012440 Rroxscaffold_1G00013180
rosa_rugosa	Rorug05G0388800
rosa_samantha	Rh5AG447300 Rh5BG465400 Rh5CG487000 Rh5DG479000
rosa_wichuraiana	Rw5G041770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1676
Acc16I	TGCGCA	1 cut(s)	828
Acc36I	ACCTGC	2 cut(s)	246, 1676
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	1 cut(s)	1905
AccII	CGCG	1 cut(s)	204
AccIII	TCCGGA	1 cut(s)	1060
AciI	CCGC	5 cut(s)	45, 72, 189, 202, 529
AclWI	GGATC	5 cut(s)	208, 654, 667, 1694, 1929
AcoI	YGGCCR	3 cut(s)	544, 1448, 1644
AcsI	RAATTY	6 cut(s)	131, 325, 475, 578, 1293, 1351
AcuI	CTGAAG	4 cut(s)	926, 929, 1185, 1833
AcyI	GRCGYC	2 cut(s)	5, 1631
AdeI	CACNNNGTG	1 cut(s)	1277
AfaI	GTAC	7 cut(s)	236, 506, 512, 617, 1263, 1670, 1787
AfiI	CCNNNNNNNGG	7 cut(s)	488, 669, 670, 719, 757, 1015, 1197
AgsI	TTSAA	8 cut(s)	157, 296, 331, 361, 475, 523, 964, 1611
AjiI	CACGTC	1 cut(s)	646
AjnI	CCWGG	4 cut(s)	546, 718, 871, 1569
AluBI	AGCT	9 cut(s)	379, 695, 832, 845, 1066, 1204, 1302, 1519, 1900
AluI	AGCT	9 cut(s)	379, 695, 832, 845, 1066, 1204, 1302, 1519, 1900
Alw21I	GWGCWC	2 cut(s)	847, 1521
Alw26I	GTCTC	4 cut(s)	224, 752, 1444, 1744
AlwI	GGATC	5 cut(s)	208, 654, 667, 1694, 1929
AlwNI	CAGNNNCTG	1 cut(s)	1759
Ama87I	CYCGRG	1 cut(s)	840
Aor13HI	TCCGGA	1 cut(s)	1060
AoxI	GGCC	3 cut(s)	544, 1448, 1644
ApeKI	GCWGC	4 cut(s)	410, 526, 824, 829
ApoI	RAATTY	6 cut(s)	131, 325, 475, 578, 1293, 1351
AsiSI	GCGATCGC	1 cut(s)	208
AspLEI	GCGC	2 cut(s)	7, 829
AspS9I	GGNCC	1 cut(s)	1573
AsuHPI	GGTGA	1 cut(s)	1525
AsuII	TTCGAA	1 cut(s)	1591
AvaI	CYCGRG	1 cut(s)	840
AvaII	GGWCC	1 cut(s)	1573
BalI	TGGCCA	3 cut(s)	546, 1450, 1646
BamHI	GGATCC	1 cut(s)	659
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	3 cut(s)	847, 1521, 1811
BbsI	GAAGAC	2 cut(s)	1580, 1832
Bbv12I	GWGCWC	2 cut(s)	847, 1521
BbvCI	CCTCAGC	3 cut(s)	351, 561, 777
BbvI	GCAGC	4 cut(s)	422, 538, 811, 841
BccI	CCATC	5 cut(s)	41, 536, 650, 800, 1636
BceAI	ACGGC	3 cut(s)	79, 136, 1175
BcgI	CGANNNNNNTGC	2 cut(s)	1898, 1932
BciT130I	CCWGG	4 cut(s)	548, 720, 873, 1571
BciVI	GTATCC	2 cut(s)	716, 1745
BcoDI	GTCTC	4 cut(s)	224, 752, 1444, 1744
BfaI	CTAG	2 cut(s)	455, 572
BfmI	CTRYAG	2 cut(s)	928, 1335
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	2 cut(s)	246, 1676
BfuI	GTATCC	2 cut(s)	716, 1745
BglI	GCCNNNNNGGC	1 cut(s)	1643
BisI	GCNGC	4 cut(s)	411, 527, 825, 830
BlsI	GCNGC	4 cut(s)	412, 528, 826, 831
Bme1390I	CCNGG	4 cut(s)	548, 720, 873, 1571
Bme18I	GGWCC	1 cut(s)	1573
BmeT110I	CYCGRG	1 cut(s)	840
BmgBI	CACGTC	1 cut(s)	646
BmgT120I	GGNCC	1 cut(s)	1573
BmiI	GGNNCC	2 cut(s)	6, 661
BmrFI	CCNGG	4 cut(s)	548, 720, 873, 1571
BmsI	GCATC	6 cut(s)	382, 397, 779, 868, 944, 1059
BpiI	GAAGAC	2 cut(s)	1580, 1832
BpmI	CTGGAG	2 cut(s)	401, 894
Bpu10I	CCTNAGC	4 cut(s)	351, 561, 777, 1515
Bpu14I	TTCGAA	1 cut(s)	1591
BpuEI	CTTGAG	2 cut(s)	1193, 1304
Bsa29I	ATCGAT	1 cut(s)	1933
BsaBI	GATNNNNATC	2 cut(s)	1041, 1320
BsaHI	GRCGYC	2 cut(s)	5, 1631
BsaJI	CCNNGG	5 cut(s)	282, 415, 462, 537, 587
BsaWI	WCCGGW	1 cut(s)	1060
Bsc4I	CCNNNNNNNGG	7 cut(s)	488, 669, 670, 719, 757, 1015, 1197
Bse118I	RCCGGY	1 cut(s)	1491
Bse3DI	GCAATG	3 cut(s)	989, 1001, 1251
Bse8I	GATNNNNATC	2 cut(s)	1041, 1320
BseAI	TCCGGA	1 cut(s)	1060
BseBI	CCWGG	4 cut(s)	548, 720, 873, 1571
BseCI	ATCGAT	1 cut(s)	1933
BseDI	CCNNGG	5 cut(s)	282, 415, 462, 537, 587
BseGI	GGATG	5 cut(s)	547, 1042, 1090, 1111, 1558
BseJI	GATNNNNATC	2 cut(s)	1041, 1320
BseLI	CCNNNNNNNGG	7 cut(s)	488, 669, 670, 719, 757, 1015, 1197
BseMI	GCAATG	3 cut(s)	989, 1001, 1251
BseMII	CTCAG	5 cut(s)	342, 552, 768, 1506, 1534
BseRI	GAGGAG	2 cut(s)	902, 1476
BseXI	GCAGC	4 cut(s)	422, 538, 811, 841
BseYI	CCCAGC	2 cut(s)	430, 1298
BsgI	GTGCAG	2 cut(s)	1353, 1794
Bsh1236I	CGCG	1 cut(s)	204
Bsh1285I	CGRYCG	1 cut(s)	208
BshFI	GGCC	3 cut(s)	546, 1450, 1646
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	1 cut(s)	1933
BsiEI	CGRYCG	1 cut(s)	208
BsiHKAI	GWGCWC	2 cut(s)	847, 1521
BsiHKCI	CYCGRG	1 cut(s)	840
BsiSI	CCGG	4 cut(s)	65, 167, 1061, 1492
BslFI	GGGAC	1 cut(s)	994
BslI	CCNNNNNNNGG	7 cut(s)	488, 669, 670, 719, 757, 1015, 1197
BsmAI	GTCTC	4 cut(s)	224, 752, 1444, 1744
BsmBI	CGTCTC	1 cut(s)	224
BsmFI	GGGAC	1 cut(s)	994
BsnI	GGCC	3 cut(s)	546, 1450, 1646
BsoBI	CYCGRG	1 cut(s)	840
Bsp119I	TTCGAA	1 cut(s)	1591
Bsp1286I	GDGCHC	3 cut(s)	847, 1521, 1811
Bsp13I	TCCGGA	1 cut(s)	1060
Bsp143I	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
Bsp19I	CCATGG	2 cut(s)	282, 462
BspACI	CCGC	5 cut(s)	45, 72, 189, 202, 529
BspANI	GGCC	3 cut(s)	546, 1450, 1646
BspCNI	CTCAG	5 cut(s)	343, 553, 769, 1507, 1533
BspDI	ATCGAT	1 cut(s)	1933
BspEI	TCCGGA	1 cut(s)	1060
BspFNI	CGCG	1 cut(s)	204
BspHI	TCATGA	1 cut(s)	1845
BspLI	GGNNCC	2 cut(s)	6, 661
BspMAI	CTGCAG	1 cut(s)	932
BspMI	ACCTGC	2 cut(s)	246, 1676
BspPI	GGATC	5 cut(s)	208, 654, 667, 1694, 1929
BspQI	GCTCTTC	1 cut(s)	84
BspT104I	TTCGAA	1 cut(s)	1591
BspT107I	GGYRCC	1 cut(s)	4
BsrDI	GCAATG	3 cut(s)	989, 1001, 1251
BsrFI	RCCGGY	1 cut(s)	1491
BssAI	RCCGGY	1 cut(s)	1491
BssECI	CCNNGG	5 cut(s)	282, 415, 462, 537, 587
BssMI	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
BssNI	GRCGYC	2 cut(s)	5, 1631
BssT1I	CCWWGG	4 cut(s)	282, 462, 537, 587
Bst2UI	CCWGG	4 cut(s)	548, 720, 873, 1571
Bst4CI	ACNGT	7 cut(s)	813, 1135, 1156, 1378, 1403, 1668, 1755
Bst6I	CTCTTC	1 cut(s)	84
BstACI	GRCGYC	2 cut(s)	5, 1631
BstBI	TTCGAA	1 cut(s)	1591
BstC8I	GCNNGC	5 cut(s)	174, 441, 483, 693, 1053
BstDEI	CTNAG	5 cut(s)	351, 561, 777, 1515, 1520
BstDSI	CCRYGG	2 cut(s)	282, 462
BstEII	GGTNACC	1 cut(s)	1561
BstF5I	GGATG	5 cut(s)	547, 1042, 1090, 1111, 1558
BstFNI	CGCG	1 cut(s)	204
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 829
BstKTI	GATC	7 cut(s)	208, 216, 662, 1282, 1702, 1819, 1937
BstMAI	GTCTC	4 cut(s)	224, 752, 1444, 1744
BstMBI	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
BstMCI	CGRYCG	1 cut(s)	208
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 182, 436, 523, 1339, 1643
BstNI	CCWGG	4 cut(s)	548, 720, 873, 1571
BstNSI	RCATGY	2 cut(s)	1268, 1682
BstPI	GGTNACC	1 cut(s)	1561
BstSCI	CCNGG	4 cut(s)	546, 718, 871, 1569
BstSFI	CTRYAG	2 cut(s)	928, 1335
BstUI	CGCG	1 cut(s)	204
BstV1I	GCAGC	4 cut(s)	422, 538, 811, 841
BstV2I	GAAGAC	2 cut(s)	1580, 1832
BstX2I	RGATCY	1 cut(s)	659
BstYI	RGATCY	1 cut(s)	659
Bsu15I	ATCGAT	1 cut(s)	1933
BsuI	GTATCC	2 cut(s)	716, 1745
BsuRI	GGCC	3 cut(s)	546, 1450, 1646
BsuTUI	ATCGAT	1 cut(s)	1933
BtgI	CCRYGG	2 cut(s)	282, 462
BtrI	CACGTC	1 cut(s)	646
BtsCI	GGATG	5 cut(s)	547, 1042, 1090, 1111, 1558
BtsI	GCAGTG	1 cut(s)	937
BtsIMutI	CAGTG	2 cut(s)	937, 1408
BveI	ACCTGC	2 cut(s)	246, 1676
Cac8I	GCNNGC	5 cut(s)	174, 441, 483, 693, 1053
CaiI	CAGNNNCTG	1 cut(s)	1759
CciI	TCATGA	1 cut(s)	1845
CfoI	GCGC	2 cut(s)	7, 829
Cfr10I	RCCGGY	1 cut(s)	1491
Cfr13I	GGNCC	1 cut(s)	1573
ClaI	ATCGAT	1 cut(s)	1933
CseI	GACGC	3 cut(s)	187, 1297, 1620
Csp6I	GTAC	7 cut(s)	235, 505, 511, 616, 1262, 1669, 1786
CviAII	CATG	9 cut(s)	283, 463, 486, 605, 1113, 1265, 1679, 1739, 1846
CviQI	GTAC	7 cut(s)	235, 505, 511, 616, 1262, 1669, 1786
DdeI	CTNAG	5 cut(s)	351, 561, 777, 1515, 1520
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	7 cut(s)	207, 215, 661, 1281, 1701, 1818, 1936
DpnII	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
DraI	TTTAAA	1 cut(s)	1413
DraIII	CACNNNGTG	1 cut(s)	1277
EaeI	YGGCCR	3 cut(s)	544, 1448, 1644
Eam1104I	CTCTTC	1 cut(s)	84
EarI	CTCTTC	1 cut(s)	84
EciI	GGCGGA	1 cut(s)	34
Ecl136II	GAGCTC	2 cut(s)	845, 1519
Eco130I	CCWWGG	4 cut(s)	282, 462, 537, 587
Eco24I	GRGCYC	3 cut(s)	847, 1521, 1811
Eco47I	GGWCC	1 cut(s)	1573
Eco53kI	GAGCTC	2 cut(s)	845, 1519
Eco57I	CTGAAG	4 cut(s)	926, 929, 1185, 1833
Eco88I	CYCGRG	1 cut(s)	840
Eco91I	GGTNACC	1 cut(s)	1561
EcoICRI	GAGCTC	2 cut(s)	845, 1519
EcoO65I	GGTNACC	1 cut(s)	1561
EcoRII	CCWGG	4 cut(s)	546, 718, 871, 1569
EcoT14I	CCWWGG	4 cut(s)	282, 462, 537, 587
EcoT38I	GRGCYC	3 cut(s)	847, 1521, 1811
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	4 cut(s)	282, 462, 537, 587
Esp3I	CGTCTC	1 cut(s)	224
FaeI	CATG	9 cut(s)	286, 466, 489, 608, 1116, 1268, 1682, 1742, 1849
FalI	AAGNNNNNCTT	2 cut(s)	427, 459
FaqI	GGGAC	1 cut(s)	994
FatI	CATG	9 cut(s)	282, 462, 485, 604, 1112, 1264, 1678, 1738, 1845
FauNDI	CATATG	2 cut(s)	1218, 1445
FblI	GTMKAC	1 cut(s)	1905
Fnu4HI	GCNGC	4 cut(s)	411, 527, 825, 830
FokI	GGATG	5 cut(s)	554, 1029, 1097, 1118, 1565
FriOI	GRGCYC	3 cut(s)	847, 1521, 1811
Fsp4HI	GCNGC	4 cut(s)	411, 527, 825, 830
FspBI	CTAG	2 cut(s)	455, 572
FspI	TGCGCA	1 cut(s)	828
GlaI	GCGC	2 cut(s)	6, 828
GluI	GCNGC	4 cut(s)	411, 527, 825, 830
GsaI	CCCAGC	2 cut(s)	434, 1302
GsuI	CTGGAG	2 cut(s)	401, 894
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	546, 1450, 1646
HapII	CCGG	4 cut(s)	65, 167, 1061, 1492
HgaI	GACGC	3 cut(s)	187, 1297, 1620
HhaI	GCGC	2 cut(s)	7, 829
Hin1I	GRCGYC	2 cut(s)	5, 1631
Hin1II	CATG	9 cut(s)	286, 466, 489, 608, 1116, 1268, 1682, 1742, 1849
Hin6I	GCGC	2 cut(s)	5, 827
HinP1I	GCGC	2 cut(s)	5, 827
HincII	GTYRAC	1 cut(s)	1927
HindII	GTYRAC	1 cut(s)	1927
HindIII	AAGCTT	1 cut(s)	1202
HinfI	GANTC	8 cut(s)	41, 61, 256, 458, 818, 960, 1248, 1607
HpaII	CCGG	4 cut(s)	65, 167, 1061, 1492
HphI	GGTGA	1 cut(s)	1525
Hpy166II	GTNNAC	4 cut(s)	616, 643, 1906, 1927
Hpy188I	TCNGA	4 cut(s)	339, 419, 626, 1003
Hpy8I	GTNNAC	4 cut(s)	616, 643, 1906, 1927
Hpy99I	CGWCG	1 cut(s)	100
HpyAV	CCTTC	3 cut(s)	429, 1085, 1169
HpyCH4III	ACNGT	7 cut(s)	813, 1135, 1156, 1378, 1403, 1668, 1755
HpyCH4IV	ACGT	2 cut(s)	233, 645
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 182, 436, 523, 1339, 1643
HpyF3I	CTNAG	5 cut(s)	351, 561, 777, 1515, 1520
HpySE526I	ACGT	2 cut(s)	233, 645
Hsp92I	GRCGYC	2 cut(s)	5, 1631
Hsp92II	CATG	9 cut(s)	286, 466, 489, 608, 1116, 1268, 1682, 1742, 1849
HspAI	GCGC	2 cut(s)	5, 827
KasI	GGCGCC	1 cut(s)	4
Kpn2I	TCCGGA	1 cut(s)	1060
Kzo9I	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
LguI	GCTCTTC	1 cut(s)	84
LmnI	GCTCC	2 cut(s)	169, 1063
Lsp1109I	GCAGC	4 cut(s)	422, 538, 811, 841
LweI	GCATC	6 cut(s)	382, 397, 779, 868, 944, 1059
MaeI	CTAG	2 cut(s)	455, 572
MaeII	ACGT	2 cut(s)	233, 645
MaeIII	GTNAC	3 cut(s)	1120, 1182, 1561
MalI	GATC	7 cut(s)	207, 215, 661, 1281, 1701, 1818, 1936
MboI	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
MboII	GAAGA	9 cut(s)	101, 284, 563, 913, 1244, 1580, 1634, 1826, 1837
MfeI	CAATTG	1 cut(s)	1394
MflI	RGATCY	1 cut(s)	659
MhlI	GDGCHC	3 cut(s)	847, 1521, 1811
MlsI	TGGCCA	3 cut(s)	546, 1450, 1646
MluNI	TGGCCA	3 cut(s)	546, 1450, 1646
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	35, 452
MmeI	TCCRAC	2 cut(s)	135, 241
Mox20I	TGGCCA	3 cut(s)	546, 1450, 1646
MroI	TCCGGA	1 cut(s)	1060
MscI	TGGCCA	3 cut(s)	546, 1450, 1646
MseI	TTAA	7 cut(s)	786, 801, 902, 1380, 1412, 1544, 1796
MslI	CAYNNNNRTG	4 cut(s)	994, 1256, 1724, 1844
Msp20I	TGGCCA	3 cut(s)	546, 1450, 1646
MspA1I	CMGCKG	2 cut(s)	379, 529
MspI	CCGG	4 cut(s)	65, 167, 1061, 1492
MspR9I	CCNGG	4 cut(s)	548, 720, 873, 1571
MunI	CAATTG	1 cut(s)	1394
MvaI	CCWGG	4 cut(s)	548, 720, 873, 1571
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	6 cut(s)	11, 182, 436, 523, 1339, 1643
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	2 cut(s)	282, 462
NdeI	CATATG	2 cut(s)	1218, 1445
NdeII	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
NlaIII	CATG	9 cut(s)	286, 466, 489, 608, 1116, 1268, 1682, 1742, 1849
NlaIV	GGNNCC	2 cut(s)	6, 661
NmuCI	GTSAC	2 cut(s)	1120, 1182
NsbI	TGCGCA	1 cut(s)	828
NspI	RCATGY	2 cut(s)	1268, 1682
NspV	TTCGAA	1 cut(s)	1591
PaeR7I	CTCGAG	1 cut(s)	840
PagI	TCATGA	1 cut(s)	1845
PaqCI	CACCTGC	1 cut(s)	1676
PciSI	GCTCTTC	1 cut(s)	84
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PfeI	GAWTC	6 cut(s)	61, 256, 818, 960, 1248, 1607
PflFI	GACNNNGTC	2 cut(s)	197, 1910
PfoI	TCCNGGA	2 cut(s)	718, 871
PkrI	GCNGC	4 cut(s)	412, 528, 826, 831
Ple19I	CGATCG	1 cut(s)	208
PleI	GAGTC	2 cut(s)	35, 452
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	35, 452
Psp124BI	GAGCTC	2 cut(s)	847, 1521
Psp6I	CCWGG	4 cut(s)	546, 718, 871, 1569
PspEI	GGTNACC	1 cut(s)	1561
PspFI	CCCAGC	2 cut(s)	430, 1298
PspGI	CCWGG	4 cut(s)	546, 718, 871, 1569
PspN4I	GGNNCC	2 cut(s)	6, 661
PspPI	GGNCC	1 cut(s)	1573
PsrI	GAACNNNNNNTAC	4 cut(s)	218, 250, 503, 535
PstI	CTGCAG	1 cut(s)	932
PstNI	CAGNNNCTG	1 cut(s)	1759
PsuI	RGATCY	1 cut(s)	659
PsyI	GACNNNGTC	2 cut(s)	197, 1910
PvuI	CGATCG	1 cut(s)	208
PvuII	CAGCTG	1 cut(s)	379
RgaI	GCGATCGC	1 cut(s)	208
RsaI	GTAC	7 cut(s)	236, 506, 512, 617, 1263, 1670, 1787
RsaNI	GTAC	7 cut(s)	235, 505, 511, 616, 1262, 1669, 1786
RseI	CAYNNNNRTG	4 cut(s)	994, 1256, 1724, 1844
SacI	GAGCTC	2 cut(s)	847, 1521
SapI	GCTCTTC	1 cut(s)	84
SaqAI	TTAA	7 cut(s)	786, 801, 902, 1380, 1412, 1544, 1796
SatI	GCNGC	4 cut(s)	411, 527, 825, 830
Sau3AI	GATC	7 cut(s)	205, 213, 659, 1279, 1699, 1816, 1934
Sau96I	GGNCC	1 cut(s)	1573
SchI	GAGTC	2 cut(s)	35, 452
ScrFI	CCNGG	4 cut(s)	548, 720, 873, 1571
SduI	GDGCHC	3 cut(s)	847, 1521, 1811
SfaAI	GCGATCGC	1 cut(s)	208
SfaNI	GCATC	6 cut(s)	382, 397, 779, 868, 944, 1059
SfcI	CTRYAG	2 cut(s)	928, 1335
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	840
SfuI	TTCGAA	1 cut(s)	1591
SgfI	GCGATCGC	1 cut(s)	208
SgrAI	CRCCGGYG	1 cut(s)	1491
SinI	GGWCC	1 cut(s)	1573
SlaI	CTCGAG	1 cut(s)	840
SmiMI	CAYNNNNRTG	4 cut(s)	994, 1256, 1724, 1844
SmlI	CTYRAG	3 cut(s)	840, 1172, 1283
SmoI	CTYRAG	3 cut(s)	840, 1172, 1283
SsiI	CCGC	5 cut(s)	45, 72, 189, 202, 529
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1765
SspMI	CTAG	2 cut(s)	455, 572
SstI	GAGCTC	2 cut(s)	847, 1521
StyD4I	CCNGG	4 cut(s)	546, 718, 871, 1569
StyI	CCWWGG	4 cut(s)	282, 462, 537, 587
TaaI	ACNGT	7 cut(s)	813, 1135, 1156, 1378, 1403, 1668, 1755
TaiI	ACGT	2 cut(s)	236, 648
TaqI	TCGA	6 cut(s)	20, 162, 841, 1591, 1819, 1933
TatI	WGTACW	1 cut(s)	1668
TfiI	GAWTC	6 cut(s)	61, 256, 818, 960, 1248, 1607
Tru1I	TTAA	7 cut(s)	786, 801, 902, 1380, 1412, 1544, 1796
Tru9I	TTAA	7 cut(s)	786, 801, 902, 1380, 1412, 1544, 1796
TscAI	CASTG	2 cut(s)	937, 1408
TseFI	GTSAC	2 cut(s)	1120, 1182
TseI	GCWGC	4 cut(s)	410, 526, 824, 829
Tsp45I	GTSAC	2 cut(s)	1120, 1182
TspDTI	ATGAA	6 cut(s)	824, 831, 1046, 1240, 1569, 1755
TspGWI	ACGGA	2 cut(s)	740, 1565
TspRI	CASTG	2 cut(s)	937, 1408
Tth111I	GACNNNGTC	2 cut(s)	197, 1910
VpaK11BI	GGWCC	1 cut(s)	1573
XapI	RAATTY	6 cut(s)	131, 325, 475, 578, 1293, 1351
XbaI	TCTAGA	1 cut(s)	454
XceI	RCATGY	2 cut(s)	1268, 1682
XhoI	CTCGAG	1 cut(s)	840
XmiI	GTMKAC	1 cut(s)	1905
XspI	CTAG	2 cut(s)	455, 572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.