Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008410

Physical Location & Seq

Genomic Coordinates Forward (+)

15290323 .. 15299251

Gene Structure 8929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00012440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3090 bp

ATGGTGAAACCGAAAGGCGATGCCTCGAAGATTCCGGCAGCGGCGAATCCTCTGGCCGAGGAACCGACGAAGATTGCGTCCAACATCAATTACCACGCGAATTTCAGCCCTCACTTCTCGCCGTTCAAGTTCGAGCCGGAGCAAGCCTACTACGCCACCGCCGAGAGCGTCCGTGACCGTCTGATCCAAAATTGGAACGAGACGTACCTGCATTTCCACAGGAAGAATCCGAAGCAGACCTACTACTTGTCCATGGAGTATCTTCAAGGACGAGCCTTGACCAATGCCATTGGGAATTTGAACATTCAGAGTGCCTATGCTGAAGCTTTGAATAAGCTGGGGCATGAGCTCGAGAATATAACCGAGCAGGAAAAAGATGCTGCACTTGGAAATGGTGGCCTGGGAAGGCTTGCTTCATGCTTTCTAGACTCCATGGCAACGTTAAATTTGCCGGCTTGGGGGTATGGTTTGAGGTACAGATACGGGCTGTTCAAGCAACGGATTGCCAAGGATGGCCAAGAAGAAACTGCTGAGGATTGGCTAGAGAAATTTAGCCCTTGGGAAGTAGTCAGGCATGATGTTGTATATCCAGTCAGGTTCTTTGGTCGTGTTCATGTTAATCCTGATGGATCTCGAAAATGGGTTGAGGGAGAGGTTCTGCAAGCTCTGGCTTATGATGTGCCAATTCCAGGATACAAAACCAAGAACACTATTAGTCTTCGTCTATGGGACGCCAAAGCATCTTCCGAGGATTTTAACCTCTTTAAGTTTAATGATGGTCAATATGAACCTGCTGCTCAGCTTCATTCTCGAGCTCAACAGATTTGTGCTGTTTTATATCCTGGAGATGCTACAGAAGAAGGGAAACTTTTACGTCTGAAGCAACAATTCTTCCTCTGCAGTGCATCGCTTCAGAAATCGCAAACTTTTAGAGTTTTTTTTTTCCTTCAACAATTGAGGACATTATTTTCAGATTCAAGGAGAGGAAACAAGGGGGCAGAATTGAAATGGTCCGAGTTTCCAACCAAAGTTGCTGTCCAAATGAATGATACTCATCCTACACTTGCAATTCCAGAGCTAATGCGATTGCTCTTGGATGAGGAAGGACTTGGGTGGGATGAGGCATGGGATGTGACAACAAGGACTGTTGCTTATACTAATCACACAGTCCTTCCTGAAGCACTTGAGAAATGGTCACAGACTGTCATGTGGAAGCTTCTTCCTCGCCATATGGAAATCATACAAGAAATTGACAGAAGGTTCATTGACATGGTGCGTGCTACACGGACAGATCTTGAGAGTAAAATTCCCACTATGTGCGTCTTGGATAACAATCCCCAAAAGCCTGTTGTGAGGATGGCTAATTTATGTGTGGTGTCTGGACATACGGTTAATGGTGTTGCTGAGTTGCATAGTGACATTTTAAAGAATGAGTTATTTGCAGACTATGTCTCACTATGGCCATCCAAGTTCCAGAACAAAACTAACGGGATTACTCCTCGGCGGTGGCTGAAGTTCTGCAGTCCTGAGCTCAGTGATATAATCACCAAATGGTTAAAAACGGATGAATGGGCAACCAACCTGGACCTACTTGTCGGTCTTCGAAAGTTAGCTGATGATGCAAAATTACAAGAGGAATGGGCGTCTGCCAAGATGGCTAATAAGAAGCGTTTGGCACAGTACATAGAGCATGTGGCAGGTGTCAAGATTGACCCAAACACTCTTTTTGACATACAAGTGAAGCGGATTCATGAGTATAAAAGACAGTTGCTTAATATTCTGGGTGCAATTTATAGATATAAGAAGCTAAAGGAGATGAGCCCTGAAGAGCGGAAGAAAGCAACTCCACGCACAGTCATGATTGGAGGAAAAGCATTTGCAACATATACAAATGCAAAAAGAATAGTGAAGTTGGTGAACGATGTAGGTGCGGTGGTCAATACTGATCCTGAGGTCAATAGCTATTTGAAGGTTGTATTTGTTCCAAATTACAATGTATCTGTGGCTGAGCTACTTATCCCAGGAAGTGAGCTGTCACAACATATCAGCACTGCAGGCATGGAGGCAAGTGGCACAAGCAACATGAAGTTCTCTTTGAACGGTTGCCTCATAATAGGAACACTGGATGGAGCTAATGTTGAAATACGTGAGGAAATTGGACAGGAAAATTTTTTCCTTTTTGGTGCCACAGCTGATGAAGTCCCTAAGCTCCGCAAGGATAGAGAGAACGGACTGTTCAAACCAGATCCTCGGTTCGAAGAAGCAAAGAAGTTTATTAGGAGTGGAGCATTTGGTAGCTACGACTACAATCCACTTCTTGACTCTCTGGAGGGGAACAGCGGTTATGGTCGTGCTGATTATTTTCTTGTCGGCCATGACTTCGCAGGCTATCTAGATGCTCAAGCAAGAGTTGATGAAGCTTACAAGGATAGGAAGAAGTGGCTTAAGATGTCCATATTGAGCACTGCAGGGTCCGGCAAGTTCAGCAGCGACCGGACAATTGCTCAGGACATATTTGCCAGAATCCAAAGAGCTCTGTTAGTGCCTGCTCTCGGGCTCATGAAGTTCATTGTCAATATAGGCCTCAATTTCCTGAATTACCCGAATCAACTCGACCGTGTTCAGCAACTTCCTAAGCGCAACGGCTCTATGTTCGTTGGCAGGAAGCGCAACATTCAAAAACCTCGCAAGCCATGCCCAGCCTTCTTTCAGGCCGTGTGCATTTTGGACCCTGTCGACTTCGATCTGTCTGAACTATGGCTCCATAAAGTTTCATTTAAAATTCCAACCTTATCCACGTCCAAGTTTCTTGTGTGGTTCATAATTAGTGTCACTAGTATGTTTCTCACAAGGAACTGCAGACCTGCACAGCATAATGTTGCTGCAGACTTATTGCTCACAGGTTTGACTACTGCTGTTCTTTATGGTGCGCCAAACCTTGCTGTAGTGCAACACAAGGATGACACGCATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGCGTTCTACAGACACTGGATACTGATAACTGATAAAGTATTACCACTTCCTGGGCTGGTCATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

1029

Amino Acids

116.89

Weight (kDa)

8.93

Isoelectric Point (pI)

36.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	110 - 836	2.2e-287	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46970
fragaria_vesca	FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910
malus_domestica	MD03G1077800.v1.1 MD05G1167500.v1.1 MD11G1082200.v1.1
prunus_persica	Prupe.6G062600_v2.0.a1
pyrus_communis	pycom03g06170 pycom11g07050
rosa_chinensis	RchiOBHm_Chr5g0068321
rosa_laevigata	RLG00000035965
rosa_multiflora	Rmu_sc0001418.1_g000022
rosa_roxburghii	Rroxscaffold_1G00012440 Rroxscaffold_1G00013180
rosa_rugosa	Rorug05G0388800
rosa_samantha	Rh5AG447300 Rh5BG465400 Rh5CG487000 Rh5DG479000
rosa_wichuraiana	Rw5G041770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1688
AasI	GACNNNNNNGTC	1 cut(s)	1592
Acc36I	ACCTGC	4 cut(s)	216, 799, 1688, 2872
AccB1I	GGYRCC	1 cut(s)	2183
AccB7I	CCANNNNNTGG	1 cut(s)	3074
AccBSI	CCGCTC	1 cut(s)	1831
AccI	GTMKAC	1 cut(s)	2736
AccII	CGCG	1 cut(s)	98
AciI	CCGC	8 cut(s)	41, 159, 1504, 1744, 1831, 1931, 2212, 2340
AclI	AACGTT	1 cut(s)	440
AclWI	GGATC	4 cut(s)	178, 637, 1940, 2240
AcoI	YGGCCR	4 cut(s)	54, 514, 1460, 2371
AcsI	RAATTY	7 cut(s)	100, 295, 445, 548, 1305, 2167, 2781
AcuI	CTGAAG	6 cut(s)	342, 896, 899, 1197, 1532, 1845
AcyI	GRCGYC	2 cut(s)	732, 1643
AdeI	CACNNNGTG	1 cut(s)	1317
AfaI	GTAC	3 cut(s)	206, 476, 1682
AfiI	CCNNNNNNNGG	4 cut(s)	458, 689, 2552, 3074
AflII	CTTAAG	1 cut(s)	2444
AhlI	ACTAGT	1 cut(s)	2834
AjiI	CACGTC	1 cut(s)	2799
AjnI	CCWGG	6 cut(s)	399, 688, 841, 1581, 2020, 3073
AloI	GAACNNNNNNTCC	2 cut(s)	2745, 2777
Alw21I	GWGCWC	5 cut(s)	351, 817, 1533, 2465, 2536
Alw26I	GTCTC	2 cut(s)	194, 1456
AlwI	GGATC	4 cut(s)	178, 637, 1940, 2240
AlwNI	CAGNNNCTG	1 cut(s)	3039
Ama87I	CYCGRG	3 cut(s)	350, 810, 2552
AoxI	GGCC	8 cut(s)	54, 397, 514, 1460, 2371, 2581, 2712, 3015
ApeKI	GCWGC	5 cut(s)	38, 380, 794, 2487, 2882
ApoI	RAATTY	7 cut(s)	100, 295, 445, 548, 1305, 2167, 2781
ArsI	GACNNNNNNTTYG	4 cut(s)	62, 94, 1020, 1052
Asp700I	GAANNNNTTC	1 cut(s)	3026
AspLEI	GCGC	3 cut(s)	2640, 2670, 2932
AspS9I	GGNCC	4 cut(s)	1011, 1585, 2472, 2728
AsuHPI	GGTGA	3 cut(s)	16, 1537, 1927
AsuII	TTCGAA	2 cut(s)	1603, 2256
AvaI	CYCGRG	3 cut(s)	350, 810, 2552
AvaII	GGWCC	4 cut(s)	1011, 1585, 2472, 2728
AxyI	CCTNAGG	1 cut(s)	1950
BalI	TGGCCA	2 cut(s)	516, 1462
BanI	GGYRCC	1 cut(s)	2183
BanII	GRGCYC	6 cut(s)	351, 817, 1533, 1823, 2536, 2559
BarI	GAAGNNNNNNTAC	4 cut(s)	224, 256, 3054, 3086
BbsI	GAAGAC	2 cut(s)	710, 1592
Bbv12I	GWGCWC	5 cut(s)	351, 817, 1533, 2465, 2536
BbvCI	CCTCAGC	1 cut(s)	531
BbvI	GCAGC	5 cut(s)	50, 367, 781, 2499, 2869
BccI	CCATC	7 cut(s)	506, 620, 770, 1351, 1471, 1648, 2120
BceAI	ACGGC	3 cut(s)	106, 2659, 2699
BcgI	CGANNNNNNTGC	2 cut(s)	1910, 1944
BciT130I	CCWGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
BciVI	GTATCC	2 cut(s)	686, 3036
BcoDI	GTCTC	2 cut(s)	194, 1456
BcuI	ACTAGT	1 cut(s)	2834
BfaI	CTAG	5 cut(s)	425, 542, 2393, 2835, 3088
BfmI	CTRYAG	9 cut(s)	852, 898, 1519, 2052, 2466, 2857, 2883, 2943, 3031
BfrI	CTTAAG	1 cut(s)	2444
BfuAI	ACCTGC	4 cut(s)	216, 799, 1688, 2872
BfuI	GTATCC	2 cut(s)	686, 3036
BglI	GCCNNNNNGGC	1 cut(s)	1655
BglII	AGATCT	1 cut(s)	1291
BisI	GCNGC	6 cut(s)	39, 42, 381, 795, 2488, 2883
BlpI	GCTNAGC	2 cut(s)	798, 2007
BlsI	GCNGC	6 cut(s)	40, 43, 382, 796, 2489, 2884
Bme1390I	CCNGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
Bme18I	GGWCC	4 cut(s)	1011, 1585, 2472, 2728
BmeT110I	CYCGRG	3 cut(s)	350, 810, 2552
BmgBI	CACGTC	1 cut(s)	2799
BmgT120I	GGNCC	4 cut(s)	1011, 1585, 2472, 2728
BmiI	GGNNCC	5 cut(s)	63, 2185, 2473, 2730, 2762
BmrFI	CCNGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
BmsI	GCATC	7 cut(s)	10, 367, 749, 838, 914, 1609, 2386
BpiI	GAAGAC	2 cut(s)	710, 1592
BpmI	CTGGAG	2 cut(s)	864, 2348
Bpu10I	CCTNAGC	5 cut(s)	531, 1527, 2205, 2505, 2634
Bpu1102I	GCTNAGC	2 cut(s)	798, 2007
Bpu14I	TTCGAA	2 cut(s)	1603, 2256
BpuEI	CTTGAG	3 cut(s)	1205, 1316, 2385
BsaAI	YACGTR	1 cut(s)	2147
BsaBI	GATNNNNATC	2 cut(s)	1053, 1332
BsaHI	GRCGYC	2 cut(s)	732, 1643
BsaWI	WCCGGW	1 cut(s)	2493
BsaXI	ACNNNNNCTCC	4 cut(s)	2121, 2151, 2745, 2775
Bsc4I	CCNNNNNNNGG	4 cut(s)	458, 689, 2552, 3074
Bse118I	RCCGGY	1 cut(s)	451
Bse1I	ACTGG	3 cut(s)	590, 2127, 3044
Bse21I	CCTNAGG	1 cut(s)	1950
Bse8I	GATNNNNATC	2 cut(s)	1053, 1332
BseBI	CCWGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
BseJI	GATNNNNATC	2 cut(s)	1053, 1332
BseLI	CCNNNNNNNGG	4 cut(s)	458, 689, 2552, 3074
BseMII	CTCAG	8 cut(s)	522, 812, 1395, 1518, 1546, 1941, 1998, 2519
BseNI	ACTGG	3 cut(s)	590, 2127, 3044
BseRI	GAGGAG	1 cut(s)	1488
BseXI	GCAGC	5 cut(s)	50, 367, 781, 2499, 2869
BseYI	CCCAGC	2 cut(s)	337, 2698
BsgI	GTGCAG	2 cut(s)	366, 2850
Bsh1236I	CGCG	1 cut(s)	98
Bsh1285I	CGRYCG	2 cut(s)	2494, 2617
BshFI	GGCC	8 cut(s)	56, 399, 516, 1462, 2373, 2583, 2714, 3017
BshNI	GGYRCC	1 cut(s)	2183
BsiEI	CGRYCG	2 cut(s)	2494, 2617
BsiHKAI	GWGCWC	5 cut(s)	351, 817, 1533, 2465, 2536
BsiHKCI	CYCGRG	3 cut(s)	350, 810, 2552
BsiSI	CCGG	5 cut(s)	35, 137, 452, 2475, 2494
BslFI	GGGAC	2 cut(s)	743, 2186
BslI	CCNNNNNNNGG	4 cut(s)	458, 689, 2552, 3074
BsmAI	GTCTC	2 cut(s)	194, 1456
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	2 cut(s)	743, 2186
BsnI	GGCC	8 cut(s)	56, 399, 516, 1462, 2373, 2583, 2714, 3017
BsoBI	CYCGRG	3 cut(s)	350, 810, 2552
Bsp119I	TTCGAA	2 cut(s)	1603, 2256
Bsp1286I	GDGCHC	7 cut(s)	351, 817, 1533, 1823, 2465, 2536, 2559
Bsp143I	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
Bsp1720I	GCTNAGC	2 cut(s)	798, 2007
Bsp19I	CCATGG	2 cut(s)	252, 432
BspACI	CCGC	8 cut(s)	41, 159, 1504, 1744, 1831, 1931, 2212, 2340
BspANI	GGCC	8 cut(s)	56, 399, 516, 1462, 2373, 2583, 2714, 3017
BspCNI	CTCAG	8 cut(s)	523, 811, 1396, 1519, 1545, 1942, 1999, 2518
BspFNI	CGCG	1 cut(s)	98
BspHI	TCATGA	3 cut(s)	1750, 1857, 2559
BspLI	GGNNCC	5 cut(s)	63, 2185, 2473, 2730, 2762
BspMAI	CTGCAG	6 cut(s)	902, 1523, 2056, 2470, 2861, 2887
BspMI	ACCTGC	4 cut(s)	216, 799, 1688, 2872
BspPI	GGATC	4 cut(s)	178, 637, 1940, 2240
BspQI	GCTCTTC	1 cut(s)	1821
BspT104I	TTCGAA	2 cut(s)	1603, 2256
BspT107I	GGYRCC	1 cut(s)	2183
BspTI	CTTAAG	1 cut(s)	2444
BsrBI	CCGCTC	1 cut(s)	1831
BsrFI	RCCGGY	1 cut(s)	451
BsrI	ACTGG	3 cut(s)	590, 2127, 3044
BssAI	RCCGGY	1 cut(s)	451
BssMI	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
BssNI	GRCGYC	2 cut(s)	732, 1643
BssT1I	CCWWGG	4 cut(s)	252, 432, 507, 557
Bst2UI	CCWGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
Bst6I	CTCTTC	1 cut(s)	1821
BstACI	GRCGYC	2 cut(s)	732, 1643
BstAFI	CTTAAG	1 cut(s)	2444
BstAPI	GCANNNNNTGC	1 cut(s)	2694
BstBAI	YACGTR	1 cut(s)	2147
BstBI	TTCGAA	2 cut(s)	1603, 2256
BstC8I	GCNNGC	9 cut(s)	144, 411, 453, 663, 1278, 2056, 2386, 2547, 2690
BstDSI	CCRYGG	2 cut(s)	252, 432
BstFNI	CGCG	1 cut(s)	98
BstHHI	GCGC	3 cut(s)	2640, 2670, 2932
BstKTI	GATC	7 cut(s)	186, 632, 1294, 1948, 2248, 2746, 3004
BstMAI	GTCTC	2 cut(s)	194, 1456
BstMBI	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
BstMCI	CGRYCG	2 cut(s)	2494, 2617
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 493, 1619, 1655, 2055, 2484, 2667, 2694, 3023
BstNI	CCWGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
BstNSI	RCATGY	1 cut(s)	1694
BstSCI	CCNGG	6 cut(s)	399, 688, 841, 1581, 2020, 3073
BstSFI	CTRYAG	9 cut(s)	852, 898, 1519, 2052, 2466, 2857, 2883, 2943, 3031
BstUI	CGCG	1 cut(s)	98
BstV1I	GCAGC	5 cut(s)	50, 367, 781, 2499, 2869
BstV2I	GAAGAC	2 cut(s)	710, 1592
BstX2I	RGATCY	3 cut(s)	629, 1291, 2245
BstYI	RGATCY	3 cut(s)	629, 1291, 2245
Bsu36I	CCTNAGG	1 cut(s)	1950
BsuI	GTATCC	2 cut(s)	686, 3036
BsuRI	GGCC	8 cut(s)	56, 399, 516, 1462, 2373, 2583, 2714, 3017
BtgI	CCRYGG	2 cut(s)	252, 432
BtgZI	GCGATG	2 cut(s)	33, 891
BtrI	CACGTC	1 cut(s)	2799
BtsI	GCAGTG	3 cut(s)	907, 2049, 2463
BtsIMutI	CAGTG	6 cut(s)	907, 1540, 2049, 2120, 2463, 3037
BveI	ACCTGC	4 cut(s)	216, 799, 1688, 2872
Cac8I	GCNNGC	9 cut(s)	144, 411, 453, 663, 1278, 2056, 2386, 2547, 2690
CaiI	CAGNNNCTG	1 cut(s)	3039
CciI	TCATGA	3 cut(s)	1750, 1857, 2559
CfoI	GCGC	3 cut(s)	2640, 2670, 2932
Cfr10I	RCCGGY	1 cut(s)	451
Cfr13I	GGNCC	4 cut(s)	1011, 1585, 2472, 2728
CseI	GACGC	5 cut(s)	66, 157, 740, 1309, 1632
Csp6I	GTAC	3 cut(s)	205, 475, 1681
CviQI	GTAC	3 cut(s)	205, 475, 1681
DpnI	GATC	7 cut(s)	185, 631, 1293, 1947, 2247, 2745, 3003
DpnII	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
DraI	TTTAAA	2 cut(s)	1425, 2779
DraIII	CACNNNGTG	1 cut(s)	1317
DrdI	GACNNNNNNGTC	1 cut(s)	1592
DseDI	GACNNNNNNGTC	1 cut(s)	1592
EaeI	YGGCCR	4 cut(s)	54, 514, 1460, 2371
Eam1104I	CTCTTC	1 cut(s)	1821
EarI	CTCTTC	1 cut(s)	1821
Ecl136II	GAGCTC	4 cut(s)	349, 815, 1531, 2534
Eco130I	CCWWGG	4 cut(s)	252, 432, 507, 557
Eco147I	AGGCCT	1 cut(s)	2583
Eco24I	GRGCYC	6 cut(s)	351, 817, 1533, 1823, 2536, 2559
Eco47I	GGWCC	4 cut(s)	1011, 1585, 2472, 2728
Eco53kI	GAGCTC	4 cut(s)	349, 815, 1531, 2534
Eco57I	CTGAAG	6 cut(s)	342, 896, 899, 1197, 1532, 1845
Eco81I	CCTNAGG	1 cut(s)	1950
Eco88I	CYCGRG	3 cut(s)	350, 810, 2552
EcoICRI	GAGCTC	4 cut(s)	349, 815, 1531, 2534
EcoRII	CCWGG	6 cut(s)	399, 688, 841, 1581, 2020, 3073
EcoT14I	CCWWGG	4 cut(s)	252, 432, 507, 557
EcoT38I	GRGCYC	6 cut(s)	351, 817, 1533, 1823, 2536, 2559
ErhI	CCWWGG	4 cut(s)	252, 432, 507, 557
Esp3I	CGTCTC	1 cut(s)	194
FalI	AAGNNNNNCTT	4 cut(s)	397, 429, 852, 884
FaqI	GGGAC	2 cut(s)	743, 2186
FauNDI	CATATG	1 cut(s)	1230
FblI	GTMKAC	1 cut(s)	2736
Fnu4HI	GCNGC	6 cut(s)	39, 42, 381, 795, 2488, 2883
FriOI	GRGCYC	6 cut(s)	351, 817, 1533, 1823, 2536, 2559
Fsp4HI	GCNGC	6 cut(s)	39, 42, 381, 795, 2488, 2883
FspBI	CTAG	5 cut(s)	425, 542, 2393, 2835, 3088
GlaI	GCGC	3 cut(s)	2639, 2669, 2931
GluI	GCNGC	6 cut(s)	39, 42, 381, 795, 2488, 2883
GsaI	CCCAGC	2 cut(s)	341, 2702
GsuI	CTGGAG	2 cut(s)	864, 2348
HaeIII	GGCC	8 cut(s)	56, 399, 516, 1462, 2373, 2583, 2714, 3017
HapII	CCGG	5 cut(s)	35, 137, 452, 2475, 2494
HgaI	GACGC	5 cut(s)	66, 157, 740, 1309, 1632
HhaI	GCGC	3 cut(s)	2640, 2670, 2932
Hin1I	GRCGYC	2 cut(s)	732, 1643
Hin6I	GCGC	3 cut(s)	2638, 2668, 2930
HinP1I	GCGC	3 cut(s)	2638, 2668, 2930
HincII	GTYRAC	1 cut(s)	2737
HindII	GTYRAC	1 cut(s)	2737
HindIII	AAGCTT	3 cut(s)	324, 1214, 2418
HinfI	GANTC	9 cut(s)	31, 46, 226, 428, 974, 1747, 2321, 2523, 2605
HpaII	CCGG	5 cut(s)	35, 137, 452, 2475, 2494
HphI	GGTGA	3 cut(s)	16, 1537, 1927
Hpy166II	GTNNAC	2 cut(s)	1918, 2737
Hpy188I	TCNGA	9 cut(s)	183, 231, 309, 748, 879, 915, 973, 1015, 2752
Hpy8I	GTNNAC	2 cut(s)	1918, 2737
Hpy99I	CGWCG	1 cut(s)	70
HpyAV	CCTTC	8 cut(s)	399, 854, 956, 1097, 1181, 1251, 1963, 2713
HpyCH4IV	ACGT	5 cut(s)	203, 440, 874, 2146, 2798
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 493, 1619, 1655, 2055, 2484, 2667, 2694, 3023
HpySE526I	ACGT	5 cut(s)	203, 440, 874, 2146, 2798
Hsp92I	GRCGYC	2 cut(s)	732, 1643
HspAI	GCGC	3 cut(s)	2638, 2668, 2930
KroI	GCCGGC	1 cut(s)	451
KroNI	GCCGGC	1 cut(s)	453
Kzo9I	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
LguI	GCTCTTC	1 cut(s)	1821
LmnI	GCTCC	5 cut(s)	139, 2129, 2214, 2285, 2766
Lsp1109I	GCAGC	5 cut(s)	50, 367, 781, 2499, 2869
LweI	GCATC	7 cut(s)	10, 367, 749, 838, 914, 1609, 2386
MaeI	CTAG	5 cut(s)	425, 542, 2393, 2835, 3088
MaeII	ACGT	5 cut(s)	203, 440, 874, 2146, 2798
MaeIII	GTNAC	6 cut(s)	173, 1132, 1194, 1415, 2034, 2830
MalI	GATC	7 cut(s)	185, 631, 1293, 1947, 2247, 2745, 3003
MbiI	CCGCTC	1 cut(s)	1831
MboI	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
MfeI	CAATTG	2 cut(s)	953, 2499
MflI	RGATCY	3 cut(s)	629, 1291, 2245
MhlI	GDGCHC	7 cut(s)	351, 817, 1533, 1823, 2465, 2536, 2559
MlsI	TGGCCA	2 cut(s)	516, 1462
MluNI	TGGCCA	2 cut(s)	516, 1462
MlyI	GAGTC	2 cut(s)	422, 2315
MmeI	TCCRAC	3 cut(s)	105, 1046, 2810
Mox20I	TGGCCA	2 cut(s)	516, 1462
MroNI	GCCGGC	1 cut(s)	451
MroXI	GAANNNNTTC	1 cut(s)	3026
MscI	TGGCCA	2 cut(s)	516, 1462
MslI	CAYNNNNRTG	5 cut(s)	1268, 1736, 1856, 2837, 2958
Msp20I	TGGCCA	2 cut(s)	516, 1462
MspA1I	CMGCKG	3 cut(s)	41, 2192, 2340
MspCI	CTTAAG	1 cut(s)	2444
MspI	CCGG	5 cut(s)	35, 137, 452, 2475, 2494
MspR9I	CCNGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
MunI	CAATTG	2 cut(s)	953, 2499
MvaI	CCWGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
MvnI	CGCG	1 cut(s)	98
MwoI	GCNNNNNNNGC	9 cut(s)	152, 493, 1619, 1655, 2055, 2484, 2667, 2694, 3023
NaeI	GCCGGC	1 cut(s)	453
NcoI	CCATGG	2 cut(s)	252, 432
NdeI	CATATG	1 cut(s)	1230
NdeII	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
NgoMIV	GCCGGC	1 cut(s)	451
NlaIV	GGNNCC	5 cut(s)	63, 2185, 2473, 2730, 2762
NmeAIII	GCCGAG	4 cut(s)	82, 187, 1480, 3043
NmuCI	GTSAC	6 cut(s)	173, 1132, 1194, 1415, 2034, 2830
NspI	RCATGY	1 cut(s)	1694
NspV	TTCGAA	2 cut(s)	1603, 2256
PaeR7I	CTCGAG	2 cut(s)	350, 810
PagI	TCATGA	3 cut(s)	1750, 1857, 2559
PaqCI	CACCTGC	1 cut(s)	1688
PceI	AGGCCT	1 cut(s)	2583
PciSI	GCTCTTC	1 cut(s)	1821
PcsI	WCGNNNNNNNCGW	2 cut(s)	74, 159
PdiI	GCCGGC	1 cut(s)	453
PdmI	GAANNNNTTC	1 cut(s)	3026
PfeI	GAWTC	7 cut(s)	31, 46, 226, 974, 1747, 2523, 2605
PflFI	GACNNNGTC	2 cut(s)	1448, 2732
PflMI	CCANNNNNTGG	1 cut(s)	3074
PfoI	TCCNGGA	2 cut(s)	688, 841
PkrI	GCNGC	6 cut(s)	40, 43, 382, 796, 2489, 2884
PleI	GAGTC	2 cut(s)	422, 2315
PpsI	GAGTC	2 cut(s)	422, 2315
Ppu21I	YACGTR	1 cut(s)	2147
Psp124BI	GAGCTC	4 cut(s)	351, 817, 1533, 2536
Psp1406I	AACGTT	1 cut(s)	440
Psp6I	CCWGG	6 cut(s)	399, 688, 841, 1581, 2020, 3073
PspFI	CCCAGC	2 cut(s)	337, 2698
PspGI	CCWGG	6 cut(s)	399, 688, 841, 1581, 2020, 3073
PspN4I	GGNNCC	5 cut(s)	63, 2185, 2473, 2730, 2762
PspPI	GGNCC	4 cut(s)	1011, 1585, 2472, 2728
PsrI	GAACNNNNNNTAC	4 cut(s)	188, 220, 2977, 3009
PstI	CTGCAG	6 cut(s)	902, 1523, 2056, 2470, 2861, 2887
PstNI	CAGNNNCTG	1 cut(s)	3039
PsuI	RGATCY	3 cut(s)	629, 1291, 2245
PsyI	GACNNNGTC	2 cut(s)	1448, 2732
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	3 cut(s)	206, 476, 1682
RsaNI	GTAC	3 cut(s)	205, 475, 1681
RseI	CAYNNNNRTG	5 cut(s)	1268, 1736, 1856, 2837, 2958
SacI	GAGCTC	4 cut(s)	351, 817, 1533, 2536
SalI	GTCGAC	1 cut(s)	2735
SapI	GCTCTTC	1 cut(s)	1821
SatI	GCNGC	6 cut(s)	39, 42, 381, 795, 2488, 2883
Sau3AI	GATC	7 cut(s)	183, 629, 1291, 1945, 2245, 2743, 3001
Sau96I	GGNCC	4 cut(s)	1011, 1585, 2472, 2728
SchI	GAGTC	2 cut(s)	422, 2315
ScrFI	CCNGG	6 cut(s)	401, 690, 843, 1583, 2022, 3075
SduI	GDGCHC	7 cut(s)	351, 817, 1533, 1823, 2465, 2536, 2559
SfaNI	GCATC	7 cut(s)	10, 367, 749, 838, 914, 1609, 2386
SfcI	CTRYAG	9 cut(s)	852, 898, 1519, 2052, 2466, 2857, 2883, 2943, 3031
Sfr274I	CTCGAG	2 cut(s)	350, 810
SfuI	TTCGAA	2 cut(s)	1603, 2256
SinI	GGWCC	4 cut(s)	1011, 1585, 2472, 2728
SlaI	CTCGAG	2 cut(s)	350, 810
SmiMI	CAYNNNNRTG	5 cut(s)	1268, 1736, 1856, 2837, 2958
SmlI	CTYRAG	6 cut(s)	350, 810, 1184, 1295, 2400, 2444
SmoI	CTYRAG	6 cut(s)	350, 810, 1184, 1295, 2400, 2444
SpeI	ACTAGT	1 cut(s)	2834
SseBI	AGGCCT	1 cut(s)	2583
SsiI	CCGC	8 cut(s)	41, 159, 1504, 1744, 1831, 1931, 2212, 2340
SspI	AATATT	1 cut(s)	1777
SspMI	CTAG	5 cut(s)	425, 542, 2393, 2835, 3088
SstI	GAGCTC	4 cut(s)	351, 817, 1533, 2536
StuI	AGGCCT	1 cut(s)	2583
StyD4I	CCNGG	6 cut(s)	399, 688, 841, 1581, 2020, 3073
StyI	CCWWGG	4 cut(s)	252, 432, 507, 557
TaiI	ACGT	5 cut(s)	206, 443, 877, 2149, 2801
TaqII	GACCGA	1 cut(s)	1586
TatI	WGTACW	1 cut(s)	1680
TauI	GCSGC	1 cut(s)	44
TfiI	GAWTC	7 cut(s)	31, 46, 226, 974, 1747, 2523, 2605
TscAI	CASTG	6 cut(s)	907, 1540, 2056, 2127, 2470, 3044
TseFI	GTSAC	6 cut(s)	173, 1132, 1194, 1415, 2034, 2830
TseI	GCWGC	5 cut(s)	38, 380, 794, 2487, 2882
Tsp45I	GTSAC	6 cut(s)	173, 1132, 1194, 1415, 2034, 2830
TspGWI	ACGGA	5 cut(s)	161, 514, 1300, 1577, 2244
TspRI	CASTG	6 cut(s)	907, 1540, 2056, 2127, 2470, 3044
Tth111I	GACNNNGTC	2 cut(s)	1448, 2732
Van91I	CCANNNNNTGG	1 cut(s)	3074
Vha464I	CTTAAG	1 cut(s)	2444
VpaK11BI	GGWCC	4 cut(s)	1011, 1585, 2472, 2728
XapI	RAATTY	7 cut(s)	100, 295, 445, 548, 1305, 2167, 2781
XbaI	TCTAGA	2 cut(s)	424, 2392
XceI	RCATGY	1 cut(s)	1694
XhoI	CTCGAG	2 cut(s)	350, 810
XmiI	GTMKAC	1 cut(s)	2736
XmnI	GAANNNNTTC	1 cut(s)	3026
XspI	CTAG	5 cut(s)	425, 542, 2393, 2835, 3088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.